First Identification and Characterization of Lactococcus garvieae Isolated from Rainbow Trout (Oncorhynchus mykiss) Cultured in Mexico
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Case Description and Sampling
2.2. Macroscopic and Histological Analyses
2.3. Bacteriological Analyses
2.4. Phenotypic and Biochemical Characterizations
2.5. 16S rDNA Sequencing and Phylogenetic Analysis
2.6. ERIC-PCR, REP-PCR, and RAPD-PCR Typing
2.7. Membrane Protein Characterization
2.8. Fulfilment of Koch’s Postulates
3. Results and Discussion
3.1. Macroscopic, Histological, and Bacteriological Analyses
3.2. Bacteriological and Biochemical Analyses
3.3. 16S rDNA Sequencing and Phylogenetic Analysis
3.4. ERIC-PCR, REP-PCR, and RAPD-PCR Typing
3.5. Membrane Protein Analyses
3.6. Challenge Assays
4. Conclusions
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Characteristics | AC16-Lg13 | LJ16-Lg14 | Mic16-Lg07 | Mic16-Lg08 | Mic16-Lg09 | Mic16-Lg10 | RC17-Lg01 | RC17-Lg02 | RC17-Lg03 | RC17-Lg04 | RC17-Lg05 | RC17-Lg06 | LP18-Lg11 | LP18-Lg12 | L. garvieae1 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
State | Mexico | Mexico | Michoacán | Michoacán | Michoacán | Michoacán | Mexico | Mexico | Mexico | Mexico | Mexico | Mexico | Michoacán | Michoacán | Review |
Isolation (month/year) | 07/2016 | 07/2016 | 12/2016 | 12/2016 | 12/2016 | 12/2016 | 12/2017 | 12/2017 | 12/2017 | 12/2017 | 12/2017 | 12/2017 | 08/2018 | 08/2018 | Review |
Farm | AC | LJ | Mic | Mic | Mic | Mic | RC | RC | RC | RC | RC | RC | LP | LP | nd |
Fish affected (g) | 200–300 | 200-300 | 200–300 | 200–300 | 200–300 | 200–500 | 200–500 | 200–500 | 200–500 | 200–500 | 200–500 | 200–500 | 200–400 | 200–400 | − |
Nº of fish sampled | 5 | 8 | 8 | 8 | 8 | 8 | 10 | 10 | 10 | 10 | 10 | 10 | 8 | 8 | nd |
Density (kg/m3) | 15 | 14 | 15 | 15 | 15 | 17 | 17 | 17 | 17 | 17 | 17 | 17 | 20 | 20 | − |
Source | Brain | Heart | Kidney | Liver | Kidney | Heart | Liver | Spleen | Heart | Brain | Kidney | Kidney | Kidney | Brain | − |
Gram | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
Morphology | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid | Ovoid |
Motility | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
Catalase | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
Oxidase | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
O/F | F | F | F | F | F | F | F | F | F | F | F | F | F | F | F |
Citrate | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
DNAsa | − | − | − | − | − | − | − | − | − | − | − | − | − | − | nd |
Vogues-Proskauer | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
A/ L/O * | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− | +/−/− |
Hydrolisys | |||||||||||||||
Starch | − | − | − | − | − | − | − | − | − | − | − | − | − | − | |
Casein | − | − | − | − | − | − | − | − | − | − | − | − | − | − | nd |
Esculin | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
Gelatine | − | − | − | − | − | − | − | − | − | − | − | − | − | − | nd |
Tween 80 | − | − | − | − | − | − | − | − | − | − | − | − | − | − | nd |
API galleries | |||||||||||||||
Esterase lipase | + | + | + | − | + | − | + | + | + | + | − | − | − | − | nd |
Leucine arylam | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
α-chemotrypsin | − | − | + | − | + | − | + | + | + | − | − | + | − | − | nd |
α-glucosidase | + | + | + | + | + | + | − | − | − | + | − | − | + | + | nd |
β-galactosidase | − | − | − | − | − | − | − | − | − | − | − | − | − | − | v2 |
β-glucosidase | + | + | + | + | + | + | − | − | − | + | − | − | + | + | nd |
β-glucuronidase | − | − | − | − | − | − | − | − | − | − | − | − | − | − | −2 |
β-NAG | − | − | − | − | − | − | − | − | − | − | − | − | − | − | v3 |
D-maltose | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
D-mannitol | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
D-mannose | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
D-melezitose | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
D-raffinose | v | v | v | v | v | v | + | − | v | v | v | v | v | v | − |
D-ribose | + | + | + | + | + | + | + | + | + | + | + | + | + | + | v |
D-sorbitol | − | − | − | − | − | − | − | − | − | − | − | − | − | − | + |
D-tagatose | + | + | + | + | + | + | + | + | + | + | + | + | + | + | v |
L-arabinose | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
APPA | + | + | + | + | + | + | + | + | + | + | + | + | + | + | +2 |
Cyclodextrin | + | + | + | + | + | + | + | + | + | + | + | + | + | + | v3 |
Glycogen | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
GTA | − | − | − | − | − | − | + | − | − | − | − | − | − | − | −2 |
Lactose | − | − | − | − | − | − | − | − | v | − | v | − | − | − | w |
PYRA | + | + | + | + | + | + | + | + | + | + | + | + | + | + | v |
Sucrose | + | + | + | + | + | + | + | + | + | + | + | + | + | + | v |
Urease | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
Temperature (°C) | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 5–37 | 4–45 |
Salinities (%) | 0–9 | 0–9 | 0–9 | 0–8 | 0–8 | 0–8 | 0–7 | 0–8 | 0–7 | 0–7 | 0–9 | 0–9 | 0–8 | 0–8 | 0–6.5 |
pH range | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 5–10 | 7–9.6 |
Biotype | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | v |
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Ortega, C.; Irgang, R.; Valladares-Carranza, B.; Collarte, C.; Avendaño-Herrera, R. First Identification and Characterization of Lactococcus garvieae Isolated from Rainbow Trout (Oncorhynchus mykiss) Cultured in Mexico. Animals 2020, 10, 1609. https://doi.org/10.3390/ani10091609
Ortega C, Irgang R, Valladares-Carranza B, Collarte C, Avendaño-Herrera R. First Identification and Characterization of Lactococcus garvieae Isolated from Rainbow Trout (Oncorhynchus mykiss) Cultured in Mexico. Animals. 2020; 10(9):1609. https://doi.org/10.3390/ani10091609
Chicago/Turabian StyleOrtega, Cesar, Rute Irgang, Benjamín Valladares-Carranza, Constanza Collarte, and Ruben Avendaño-Herrera. 2020. "First Identification and Characterization of Lactococcus garvieae Isolated from Rainbow Trout (Oncorhynchus mykiss) Cultured in Mexico" Animals 10, no. 9: 1609. https://doi.org/10.3390/ani10091609
APA StyleOrtega, C., Irgang, R., Valladares-Carranza, B., Collarte, C., & Avendaño-Herrera, R. (2020). First Identification and Characterization of Lactococcus garvieae Isolated from Rainbow Trout (Oncorhynchus mykiss) Cultured in Mexico. Animals, 10(9), 1609. https://doi.org/10.3390/ani10091609