Morpho-Molecular Features and Phylogenetic Relationships of Metorchis butoridi Oschmarin, 1963 (Trematoda: Opisthorchiidae) from East Asia
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Sample Collection and Preparation of Whole Mounts
2.2. DNA Extraction, Amplification, and Sequencing
2.3. Analysis of Genetic Data
3. Results
3.1. Taxonomic Summary
3.2. Morphological Description
3.3. Genetic Data
3.3.1. Intraspecific Variation
3.3.2. Phylogenetic Relationships
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Gene | 28S | ITS1-5.8S-ITS2 | cox1 |
---|---|---|---|
PCR | forward dig12 (5′-AAG-CAT-ATC-ACT-AAG-CGG-3′) and reverse 1500R (5′-GCT-ATC-CTG-AGG-GAA-ACT-TCG-3′) [18] | forward BD1 (5′-GTC-GTA-ACA-AGG-TTT-CCG-TA-3′) [19] and reverse 28S4R (5′-TAT-TTA-GCC-TTG-GAT-GGA-GTT-TAC-C-3′) [9] | forward 5cF22 (5′-TAG-ACT-ATC-TGT-CTT-CAA-AAC-A-3′) [20] and reverse CO1-Rv (5′-AAC-AAA-TCA-TGATGC-AAA-AGG-TA-3′) [21]; forward MBCOIF* (5′-GTG-TCT-GCG-GTA-TGG-CTC-CT-3′) and reverse MBCOIR* (5′-AGC-ACC-CAG-TCC-ACA-CAA-GG-3′) |
Sequencing (internal) | 900F (5′-CCG-TCT-TGA-AAC-ACG-GAC-CAA-G-3′), ECD2 (5′-CTT-GGT-CCG-TGT-TTC-AAG-ACG-GG-3′) [18]; 1200R (5′-GCA-TAG-TTC-ACC-ATC-TTTCGG-3′) [22]; 28S4R | F1i27* (5′-TGC-CTA-CCC-GTC-TGA-TGC-TCT-C-3′); R1i15 (5′-GTC-GTA-ACA-AGG-TTT-CCG-TA-3′) [23]; F2i03* (5′-GAC-TGC-CTA-GAT-GAG-GGG-GTG-G-3′); R2i18* (5′-GAC-AAA-GGA-CCA-ACA-ACG-GAG-C-3′) | MOR11.1* (5′-GAG-TTC-CAG-CAA-GCA-TAA-AC-3′) |
M. butoridi Our Date n = 5 | M. butoridi [6] | M. orientalis [4] | M. orientalis [7] | M. orientalis [29] | M. orientalis [15] | M. ussuriensis [9] | M. elegans [5] | M. taiwanensis [7] | M. taiwanensis [10] | |
---|---|---|---|---|---|---|---|---|---|---|
Body length | 1.83–3.00 | 4.10–4.70 | 2.36–4.65 | 3.00–6.81 | 3.43 | 4.98–9.10 | 2.42–3.93 | 3.20–4.50 | 3.49–5.81 | 2.50–3.50 |
Body width | 0.35–0.60 | 0.65–0.70 | 0.53–1.23 | 0.61–1.64 | 0.83 | 0.61–1.35 | 0.34–0.79 | 0.46–0.54 | 0.42–1.45 | 0.40–0.55 |
Length/width ratio, % | 1:4.06–6.32 | – | – | 1:2.99–4.49 | – | – | 1:4.06–8.50 | – | 1:4.26–11.2 | – |
Forebody length | 0.63–1.08 | – | – | 0.66–1.81 | – | – | 0.83–1.42 | – | 0.83–1.68 | – |
Body/forebody length ratio, % | 1:2.70–3.56 | – | – | – | – | – | 1:2.30–3.20 | – | – | – |
Oral sucker length | 0.13–0.19 | 0.22–0.30 | 0.18–0.29 | 0.27–0.38 | 0.28 | 0.33–0.43 | 0.16–0.19 | 0.25–0.25 | 0.16–0.29 | 0.18–023 |
Oral sucker width | 0.22–0.25 | 0.30–0.34 | 0.18–0.29 | 0.30–0.38 | 0.29 | 0.31–0.37 | 0.17–0.19 | 0.25–0.32 | 0.20–0.28 | 0.20–0.23 |
Ventral sucker length | 0.16–0.19 | 0.25–0.34 | 0.12–0.30 | 0.23–0.33 | 0.27 | 0.30–0.40 | 0.14–0.18 | 0.21–0.27 | 0.20–0.28 | 0.15–0.18 |
Ventral sucker width | 0.16–0.20 | 0.25–0.34 | 0.12–0.30 | 0.22–0.33 | 0.27 | 0.27–0.39 | 0.14–0.17 | 0.19–0.25 | 0.20–0.27 | 0.15–0.18 |
Ventral/oral sucker length ratio, % | 1:1.00–1.39 | – | – | – | – | – | 1:0.82–0.98 | – | – | – |
Ventral/oral sucker width ratio, % | 1:0.70–0.86 | – | – | – | – | – | 1:0.78–0.94 | – | – | – |
Pharynx length | 0.05–0.07 | 0.08–0.10 | 0.04–0.06 | 0.07–0.08 | 0.07 | – | 0.05–0.07 | 0.30 | 0.07–0.10 | – |
Pharynx width | 0.05–0.07 | 0.08–0.09 | 0.04–0.06 | 0.07–0.08 | 0.07 | – | 0.05–0.07 | 0.26 | 0.05–0.08 | – |
Esophagus length | 0 | 0 | – | 0.08–0.18 | 0.07 | – | 0.03–0.10 | – | 0.03–0.12 | – |
Ovary length | 0.10–0.17 | 0.18–0.20 | 0.26–0.28 | 0.12–0.33 | 0.14 | 0.35–0.53 | 0.12–0.24 | 0.12–0.16 | 0.18–0.32 | 0.15–0.18 |
Ovary width | 0.11–0.20 | 0.18–0.23 | 0.33–0.36 | 0.17–0.40 | 0.21 | 0.25–0.35 | 0.12–0.27 | 0.10–0.11 | 0.15–0.33 | 0.15–0.18 |
Anterior testis length | 0.16–0.38 | 0.35 | 0.44–0.54 | 0.25–0.83 | 0.30 | 0.83–1.17 | 0.24–0.44 | 0.22–0.37 | 0.33–0.83 | 0.25–0.35 |
Anterior testis width | 0.23–0.54 | 0.26 | 0.73–0.90 | 0.32–0.98 | 0.42 | 0.51–0.89 | 0.27–0.56 | 0.20–0.31 | 0.33–0.61 | 0.30–0.38 |
Posterior testis length | 0.13–0.41 | 0.36–0.44 | 0.44–0.54 | 0.25–0.90 | 0.36 | 0.88–1.22 | 0.29–0.58 | 0.28–0.36 | 0.33–0.83 | 0.30–0.35 |
Posterior testis width | 0.25–0.55 | 0.34 | 0.73–0.90 | 0.32–1.08 | 0.43 | 0.60–1.08 | 0.30–0.67 | 0.22–0.38 | 0.40–0.65 | 0.33–0.43 |
Anterior end of vitellarium | 0.31–0.72 | – | – | – | – | – | 0.43–0.89 | 0.60 | – | – |
Egg length | 0.015–0.030 | 0.025–0.027 | 0.029–0.032 | 0.029–0.032 | – | 0.025–0.029 | 0.027–0.031 | 0.024–0.028 | 0.026–0.030 | 0.023–0.028 |
Egg width | 0.010–0.018 | 0.014–0.015 | 0.015–0.017 | 0.014–0.017 | – | 0.013–0.015 | 0.015–0.019 | 0.012–0.014 | 0.136–0.017 | 0.014–0.016 |
Opisthorchiidae | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Metorchis orientalis MK482051 | 0.002 | 0.002 | 0.003 | 0.003 | 0.004 | 0.004 | 0.004 | 0.007 | 0.006 | 0.007 | 0.007 | 0.007 | 0.013 | 0.008 | |
2 | Metorchis ussuriensis KY075777 | 0.006 | 0.002 | 0.003 | 0.003 | 0.004 | 0.004 | 0.004 | 0.007 | 0.006 | 0.007 | 0.007 | 0.007 | 0.013 | 0.008 | |
3 | Metorchis butoridi OR095627-OR095634 | 0.003 | 0.005 | 0.003 | 0.003 | 0.004 | 0.004 | 0.004 | 0.006 | 0.006 | 0.007 | 0.007 | 0.007 | 0.013 | 0.008 | |
4 | Clonorchis sinensis JF823989 | 0.009 | 0.009 | 0.008 | 0.002 | 0.004 | 0.004 | 0.003 | 0.006 | 0.006 | 0.006 | 0.007 | 0.007 | 0.013 | 0.008 | |
5 | Opisthorchis felineus MF099790 | 0.011 | 0.011 | 0.010 | 0.006 | 0.003 | 0.004 | 0.003 | 0.006 | 0.006 | 0.006 | 0.007 | 0.007 | 0.013 | 0.008 | |
6 | Opisthorchis viverrini HM004188 | 0.019 | 0.019 | 0.018 | 0.015 | 0.015 | 0.004 | 0.004 | 0.007 | 0.006 | 0.007 | 0.007 | 0.007 | 0.013 | 0.008 | |
7 | Opisthorchis noverca KC295443 | 0.020 | 0.020 | 0.018 | 0.016 | 0.017 | 0.017 | 0.005 | 0.007 | 0.006 | 0.007 | 0.007 | 0.007 | 0.013 | 0.008 | |
8 | Erschoviorchis anuiensis MK877245 | 0.015 | 0.015 | 0.014 | 0.014 | 0.014 | 0.022 | 0.025 | 0.006 | 0.006 | 0.006 | 0.007 | 0.007 | 0.013 | 0.008 | |
9 | Amphimerus ovalis AY116876 | 0.046 | 0.048 | 0.045 | 0.045 | 0.045 | 0.052 | 0.052 | 0.042 | 0.007 | 0.007 | 0.008 | 0.007 | 0.013 | 0.008 | |
10 | Apophallus zalophi MG806918 | 0.043 | 0.045 | 0.042 | 0.042 | 0.042 | 0.044 | 0.050 | 0.041 | 0.056 | 0.005 | 0.007 | 0.007 | 0.012 | 0.008 | |
11 | Liliatrema skrjabini MT303944 | 0.048 | 0.049 | 0.047 | 0.046 | 0.048 | 0.050 | 0.052 | 0.047 | 0.059 | 0.028 | 0.007 | 0.006 | 0.013 | 0.008 | |
12 | Cryptocotyle lata MH025622 | 0.059 | 0.061 | 0.058 | 0.058 | 0.060 | 0.065 | 0.062 | 0.060 | 0.067 | 0.059 | 0.054 | 0.004 | 0.013 | 0.008 | |
13 | Cryptocotyle lingua AY222228 | 0.058 | 0.060 | 0.057 | 0.057 | 0.059 | 0.062 | 0.063 | 0.055 | 0.064 | 0.053 | 0.047 | 0.021 | 0.012 | 0.008 | |
14 | Pachytrema calculus AF151942 | 0.209 | 0.214 | 0.212 | 0.209 | 0.209 | 0.207 | 0.215 | 0.212 | 0.219 | 0.212 | 0.216 | 0.203 | 0.210 | 0.012 | |
Heterophyidae (outgroup) | ||||||||||||||||
15 | Metagonimus suifunensis KX387456 | 0.065 | 0.063 | 0.064 | 0.060 | 0.064 | 0.065 | 0.070 | 0.065 | 0.074 | 0.065 | 0.063 | 0.069 | 0.066 | 0.198 |
Opisthorchiidae | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Metorchis butoridi OR088532 | 0.001 | 0.000 | 0.002 | 0.002 | 0.002 | 0.002 | 0.003 | 0.010 | 0.010 | 0.010 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.013 | |
2 | Metorchis butoridi OR088533 | 0.002 | 0.001 | 0.001 | 0.001 | 0.001 | 0.001 | 0.003 | 0.010 | 0.010 | 0.011 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.013 | |
3 | Metorchis butoridi OR088534 | 0.000 | 0.002 | 0.002 | 0.002 | 0.002 | 0.002 | 0.003 | 0.010 | 0.010 | 0.010 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.013 | |
4 | Metorchis butoridi OR088535 | 0.004 | 0.002 | 0.004 | 0.001 | 0.002 | 0.002 | 0.003 | 0.010 | 0.010 | 0.011 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.013 | |
5 | Metorchis butoridi OR088536 | 0.004 | 0.002 | 0.004 | 0.002 | 0.002 | 0.002 | 0.003 | 0.010 | 0.010 | 0.011 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.013 | |
6 | Metorchis butoridi OR088537 | 0.004 | 0.002 | 0.004 | 0.004 | 0.004 | 0.002 | 0.003 | 0.010 | 0.010 | 0.011 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.013 | |
7 | Metorchis butoridi OR088530 | 0.003 | 0.001 | 0.003 | 0.003 | 0.003 | 0.003 | 0.003 | 0.010 | 0.010 | 0.011 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.013 | |
8 | Metorchis butoridi OR088531 | 0.013 | 0.012 | 0.013 | 0.012 | 0.010 | 0.013 | 0.012 | 0.010 | 0.010 | 0.011 | 0.011 | 0.011 | 0.010 | 0.011 | 0.011 | 0.013 | 0.013 | |
9 | Metorchis ussuriensis OR095177 | 0.135 | 0.134 | 0.135 | 0.132 | 0.134 | 0.132 | 0.134 | 0.137 | 0.010 | 0.011 | 0.010 | 0.011 | 0.010 | 0.012 | 0.011 | 0.012 | 0.014 | |
10 | Metorchis orientalis KT239342 | 0.145 | 0.145 | 0.145 | 0.145 | 0.145 | 0.147 | 0.146 | 0.153 | 0.147 | 0.009 | 0.011 | 0.011 | 0.011 | 0.011 | 0.012 | 0.012 | 0.013 | |
11 | Opisthorchis viverrini JF739555 | 0.151 | 0.151 | 0.151 | 0.151 | 0.151 | 0.153 | 0.152 | 0.158 | 0.157 | 0.101 | 0.010 | 0.011 | 0.011 | 0.011 | 0.011 | 0.013 | 0.013 | |
12 | Clonorchis sinensis MT607652 | 0.161 | 0.159 | 0.161 | 0.159 | 0.159 | 0.161 | 0.159 | 0.166 | 0.148 | 0.158 | 0.155 | 0.010 | 0.010 | 0.011 | 0.012 | 0.013 | 0.014 | |
13 | Opisthorchis felineus EU921260 | 0.159 | 0.157 | 0.159 | 0.155 | 0.155 | 0.159 | 0.157 | 0.157 | 0.152 | 0.156 | 0.166 | 0.151 | 0.010 | 0.011 | 0.012 | 0.013 | 0.013 | |
14 | Opisthorchis sudarikovi MK033132 | 0.143 | 0.141 | 0.143 | 0.140 | 0.140 | 0.143 | 0.141 | 0.145 | 0.149 | 0.143 | 0.140 | 0.145 | 0.136 | 0.011 | 0.012 | 0.012 | 0.014 | |
15 | Erschoviorchis anuiensis OR084097 | 0.161 | 0.160 | 0.161 | 0.159 | 0.160 | 0.162 | 0.161 | 0.164 | 0.178 | 0.164 | 0.166 | 0.158 | 0.165 | 0.159 | 0.011 | 0.013 | 0.013 | |
16 | Amphimerus sp. MK238506 | 0.178 | 0.179 | 0.178 | 0.178 | 0.179 | 0.181 | 0.180 | 0.183 | 0.192 | 0.199 | 0.183 | 0.199 | 0.193 | 0.191 | 0.191 | 0.011 | 0.013 | |
17 | Cryptocotyle lingua EU876333 | 0.222 | 0.224 | 0.222 | 0.222 | 0.223 | 0.224 | 0.225 | 0.227 | 0.231 | 0.231 | 0.224 | 0.229 | 0.235 | 0.225 | 0.239 | 0.192 | 0.013 | |
Heterophyidae (outgroup) | |||||||||||||||||||
18 | Metagonimus suifunensis MK736830 | 0.243 | 0.243 | 0.243 | 0.244 | 0.244 | 0.245 | 0.242 | 0.247 | 0.258 | 0.251 | 0.244 | 0.251 | 0.249 | 0.244 | 0.248 | 0.232 | 0.240 |
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Solodovnik, D.A.; Tatonova, Y.V.; Besprozvannykh, V.V. Morpho-Molecular Features and Phylogenetic Relationships of Metorchis butoridi Oschmarin, 1963 (Trematoda: Opisthorchiidae) from East Asia. Animals 2024, 14, 124. https://doi.org/10.3390/ani14010124
Solodovnik DA, Tatonova YV, Besprozvannykh VV. Morpho-Molecular Features and Phylogenetic Relationships of Metorchis butoridi Oschmarin, 1963 (Trematoda: Opisthorchiidae) from East Asia. Animals. 2024; 14(1):124. https://doi.org/10.3390/ani14010124
Chicago/Turabian StyleSolodovnik, Daria Andreevna, Yulia Viktorovna Tatonova, and Vladimir Vladimirovich Besprozvannykh. 2024. "Morpho-Molecular Features and Phylogenetic Relationships of Metorchis butoridi Oschmarin, 1963 (Trematoda: Opisthorchiidae) from East Asia" Animals 14, no. 1: 124. https://doi.org/10.3390/ani14010124
APA StyleSolodovnik, D. A., Tatonova, Y. V., & Besprozvannykh, V. V. (2024). Morpho-Molecular Features and Phylogenetic Relationships of Metorchis butoridi Oschmarin, 1963 (Trematoda: Opisthorchiidae) from East Asia. Animals, 14(1), 124. https://doi.org/10.3390/ani14010124