Hyperplanar Morphological Clustering of a Hippocampus by Using Volumetric Computerized Tomography in Early Alzheimer’s Disease
Abstract
:1. Introduction
2. Methods
2.1. Subjects
2.2. Imaging Protocol
2.3. SSA Software
2.4. Supervised Model Clustering
2.5. Benchmarking with Conventional Metric Analysis
2.6. Validation and Performance Analysis
3. Results
3.1. Hippocampal Morphology Variability
3.2. Multi-Dimensional SVM Classification
3.3. Optimal Number of Model Parameters
- (1)
- Both seen and unseen samples can be described by a linear combination of only 10 bases (compactness and generalization abilities of the model).
- (2)
- Any linear combination generated by randomized (with a Gaussian distribution) model parameters can synthesize a sample that is closely resemble to those previously seen (specificity) [31].
4. Discussion
5. Conclusions
Acknowledgments
Author Contributions
Conflicts of Interest
References
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Subject N = 33 | Control N = 30 | p | |
---|---|---|---|
Age (40–90 Year) | 68.51 ± 5.5 | 67.93 ± 5 | 0.076 |
Female | 25 (75.8%) | 15 (50%) | 0.065 |
Highest level of education | Less than Level 6 (90.9%) | Less than Level 6 (60%) | 0.034 |
Occupation | Retired (75.8%) | Retired (50%) | 0.066 |
Family history of dementia | None | None | - |
Average blood pressure (mmHg) | 135.1/75.5 ± 14.2/7.3 | 139.2/81.4 ± 14.4/8 | 0.064 |
TMSE* score (point) | 18.3 ± 1.6 | 27.5 ± 1.6 | 0.027 |
Attributes | Left | % | Right | % |
---|---|---|---|---|
Correctly Classified Instances | 60 | 95.2381 | 62 | 98.4127 |
Incorrectly Classified Instance | 3 | 4.7619 | 1 | 1.5873 |
Kappa Statistics | 0.9047 | 0.9682 | ||
Mean Absolute Error | 0.0476 | 0.0159 | ||
Root Mean Squared Error | 0.2182 | 0.1260 | ||
Relative Absolute Error | 9.5395% | 3.1798% | ||
Root Relative Squared Error | 43.6690% | 25.2123% |
Left | Correctly Classified (Samples) | Incorrectly Classified (Samples) | ||||||
Modes | TP–C | TP–S | TN–C | TN–S | FP–C | FP–S | FN–C | FN–S |
1 | 29 | 30 | 29 | 30 | 3 | 1 | 1 | 3 |
2 | 28 | 31 | 28 | 31 | 2 | 2 | 2 | 2 |
3 | 29 | 31 | 29 | 31 | 2 | 1 | 1 | 2 |
4 | 29 | 30 | 29 | 30 | 3 | 1 | 1 | 3 |
5 | 29 | 31 | 29 | 31 | 2 | 1 | 1 | 2 |
6 | 29 | 32 | 29 | 32 | 1 | 1 | 1 | 1 |
7 | 29 | 33 | 29 | 33 | 0 | 1 | 1 | 0 |
8 | 29 | 33 | 29 | 33 | 0 | 1 | 1 | 0 |
9 | 29 | 33 | 29 | 33 | 0 | 1 | 1 | 0 |
10 | 29 | 33 | 29 | 33 | 0 | 1 | 1 | 0 |
Right | Correctly Classified (Samples) | Incorrectly Classified (Samples) | ||||||
Modes | TP-C | TP-S | TN-C | TN-S | FP-C | FP-S | FN-C | FN-S |
1 | 30 | 32 | 30 | 32 | 1 | 0 | 0 | 1 |
2 | 29 | 32 | 29 | 32 | 1 | 1 | 1 | 1 |
3 | 30 | 32 | 30 | 32 | 1 | 0 | 0 | 1 |
4 | 30 | 32 | 30 | 32 | 1 | 0 | 0 | 1 |
5 | 30 | 33 | 30 | 33 | 0 | 0 | 0 | 0 |
6 | 30 | 33 | 30 | 33 | 0 | 0 | 0 | 0 |
7 | 30 | 33 | 30 | 33 | 0 | 0 | 0 | 0 |
8 | 30 | 33 | 30 | 33 | 0 | 0 | 0 | 0 |
9 | 30 | 33 | 30 | 33 | 0 | 0 | 0 | 0 |
10 | 30 | 32 | 30 | 32 | 1 | 0 | 0 | 1 |
L | Sensitivity | Specificity | Precision | Accuracy | F-Measure | |||||
M | C | S | C | S | C | S | C | S | C | S |
1 | 0.967 | 0.909 | 0.906 | 0.968 | 0.906 | 0.968 | 0.935 | 0.938 | 0.935 | 0.938 |
2 | 0.933 | 0.939 | 0.933 | 0.939 | 0.933 | 0.939 | 0.933 | 0.939 | 0.933 | 0.939 |
3 | 0.967 | 0.939 | 0.935 | 0.969 | 0.935 | 0.969 | 0.951 | 0.954 | 0.951 | 0.954 |
4 | 0.967 | 0.909 | 0.906 | 0.968 | 0.906 | 0.968 | 0.935 | 0.938 | 0.935 | 0.938 |
5 | 0.967 | 0.939 | 0.935 | 0.969 | 0.935 | 0.969 | 0.951 | 0.954 | 0.951 | 0.954 |
6 | 0.967 | 0.970 | 0.967 | 0.970 | 0.967 | 0.970 | 0.967 | 0.970 | 0.967 | 0.970 |
7 | 0.967 | 1 | 1 | 0.971 | 1 | 0.971 | 0.983 | 0.985 | 0.983 | 0.985 |
8 | 0.967 | 1 | 1 | 0.971 | 1 | 0.971 | 0.983 | 0.985 | 0.983 | 0.985 |
9 | 0.967 | 1 | 1 | 0.971 | 1 | 0.971 | 0.983 | 0.985 | 0.983 | 0.985 |
10 | 0.967 | 1 | 1 | 0.971 | 1 | 0.971 | 0.983 | 0.985 | 0.983 | 0.985 |
R | Sensitivity | Specificity | Precision | Accuracy | F-Measure | |||||
M | C | S | C | S | C | S | C | S | C | S |
1 | 1 | 0.970 | 0.968 | 1 | 0.968 | 1 | 0.984 | 0.985 | 0.984 | 0.985 |
2 | 0.967 | 0.970 | 0.967 | 0.970 | 0.967 | 0.970 | 0.967 | 0.970 | 0.967 | 0.970 |
3 | 1 | 0.970 | 0.968 | 1 | 0.968 | 1 | 0.984 | 0.985 | 0.984 | 0.985 |
4 | 1 | 0.970 | 0.968 | 1 | 0.968 | 1 | 0.984 | 0.985 | 0.984 | 0.985 |
5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
6 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
7 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
8 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
9 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
10 | 1 | 0.970 | 0.968 | 1 | 0.968 | 1 | 0.984 | 0.985 | 0.984 | 0.985 |
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Suksuphew, S.; Horkaew, P. Hyperplanar Morphological Clustering of a Hippocampus by Using Volumetric Computerized Tomography in Early Alzheimer’s Disease. Brain Sci. 2017, 7, 155. https://doi.org/10.3390/brainsci7110155
Suksuphew S, Horkaew P. Hyperplanar Morphological Clustering of a Hippocampus by Using Volumetric Computerized Tomography in Early Alzheimer’s Disease. Brain Sciences. 2017; 7(11):155. https://doi.org/10.3390/brainsci7110155
Chicago/Turabian StyleSuksuphew, Sarawut, and Paramate Horkaew. 2017. "Hyperplanar Morphological Clustering of a Hippocampus by Using Volumetric Computerized Tomography in Early Alzheimer’s Disease" Brain Sciences 7, no. 11: 155. https://doi.org/10.3390/brainsci7110155