Thunbergia laurifolia Leaf Extract Inhibits Glutamate-Induced Neurotoxicity and Cell Death through Mitophagy Signaling
Abstract
:1. Introduction
2. Materials and Methods
2.1. Chemicals and Reagents
2.2. Plant Material and Extraction
2.3. Qualitative Bioactive Compounds of TLE by LC–MS Analysis
2.4. Cell Culture
2.5. Cell Viability Assay
2.6. Cytotoxicity Assay
2.7. Intracellular ROS Assay
2.8. Mitochondrial Membrane Potential Staining (TMRE) Assay
2.9. Western Blot Analysis
2.10. Immunofluorescent Colocalization Analysis
2.11. Real-Time PCR Analysis
2.12. Molecular Docking
2.13. Lipinski’s Rule of Five Parameters and ADMET Property Analysis
2.14. Statistical Analysis
3. Results
3.1. Characterization of Bioactive Compounds from TLE
3.2. TLE Attenuates Glutamate-Induced Toxicity in HT-22 Cells
3.3. TLE Inhibits Glutamate-Induced Intracellular ROS Generation
3.4. TLE Sustains the Membrane Potential of Mitochondria
3.5. TLE Upregulates the mRNA Expression Level of Antioxidant Enzyme Genes
3.6. TLE Inhibits Glutamate-Induced Excessive Mitophagy in HT-22 Cells
3.7. In Silico Virtual Screening of Binding Affinity between TLE-Identified Compounds and Mitophagy Protein Markers
3.7.1. Interaction between TLE-Identified Compounds and PINK1
3.7.2. Interaction between TLE-Identified Compounds and E3 Ubiquitin-Protein Ligase Parkin
3.8. Lipinski’s Rule of Five Parameters and ADMET Properties of TLE Phytochemical Compounds
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Genes | Gene Accession Number | Sequence of Primer |
---|---|---|
SOD1 forward | NM_011434 | 5′-CAGGACCTCATTTTAATCCTCAC-3′ |
SOD1 reverse | NM_011434 | 5′-CCCAGGTCTCCAACATGC-3′ |
SOD2 forward | NM_013671 | 5′-CTGGACAAACCTGAGCCCTA-3′ |
SOD2 reverse | NM_013671 | 5′-TGATAGCCTCCAGCAACTCTC-3′ |
CAT forward | NM_009804 | 5′-CAGCGACCAGATGAAGCA-3′ |
CAT reverse | NM_009804 | 5′-CTCCGGTGGTCAGGACAT-3′ |
GPx forward | NM_008160 | 5′-ACAGTCCACCGTGTATGCCTTC-3′ |
GPx reverse | NM_008160 | 5′-CTCTTCATTCTTGCCATTCTCCTG-3′ |
β-actin forward | NM_007393 | 5′-GGCTGTATTCCCCTCCATCG-3′ |
β-actin reverse | NM_007393 | 5′-CCAGTTGGTAACAATGCCATGT-3′ |
Ligand | Binding Energy (kcal/mol) | Amino Acid Interaction | ||
---|---|---|---|---|
Hydrogen Bond | Hydrophobic Bond | Electrostatic Bond | ||
GX8 (reference ligand) | −8.6 | SER363 ARG380 ASN414 ARG415 ARG483 (2) SER508 (2) SER555 SER602 | TYR334 ALA556 TYR572 | ARG415 (2) ARG483 |
7-Hydroxycoumarin | −6.5 | SER363 ARG380 SER602 | TYR334 (2) ALA556 | - |
Apigenin-7-O-glucoside | −8.7 | SER363 ARG380 (2) ASN382 SER602 | PHE478 | ARG415 (2) |
Apiin | −8.4 | TYR334 SER363 (2) ARG380 ASN382 ASN414 SER508 SER555 SER602 | ALA556 | ARG415 (2) |
Betaine | −3.9 | ARG415 (3) SER508 (2) SER555 | TYR525 | TYR525 |
Epicatechin | −7.8 | SER363 SER555 (2) | TYR334 TYR525 ALA556 TYR572 | - |
Ligand | Binding Energy (kcal/mol) | Amino Acid Interaction | ||
---|---|---|---|---|
Hydrogen Bond | Hydrophobic Bond | Electrostatic Bond | ||
Curcumin (reference ligand) | −5.4 | LYS298 GLU418 | ARG302 | LYS298 ASP423 |
7-Hydroxycoumarin | −4.9 | LEU301 ASN421 (2) ASP423 ASN424 | LEU301 | GLU418 ASP423 |
Apigenin-7-O-glucoside | −5.1 | LYS298 ASP423 GLU418 | TYR427 | LYS298 (2) |
Apiin | −4.4 | - | TYR427 (2) | LYS336 |
Betaine | −3.4 | LYS298 (2) GLU418 (3) ASP423 ASN424 | - | GLU418 ASP423 |
Epicatechin | −4.6 | GLU418 ASP423 | - | LYS298 |
Ligand | Binding Energy (kcal/mol) | Amino Acid Interaction | ||
---|---|---|---|---|
Hydrogen Bond | Hydrophobic Bond | Electrostatic Bond | ||
Mavoglurant (reference ligand) | −5.4 | GLY179 | VAL425 (2) CYS431 HIS433 MET434 (2) PRO437 | - |
7-Hydroxycoumarin | −4.8 | GLY429 CYS431 LYS435 | CYS431 | - |
Apigenin-7-O-glucoside | −6.2 | GLY179 ASN428 GLY429 | VAL425 CYS431 MET434 PRO437 | - |
Apiin | 1.6 | LYS435 (2) | HIS433 LYS435 (2) | - |
Betaine | −3.4 | ASN428 GLY429 CYS431 HIS433 (2) | - | - |
Epicatechin | −6.6 | GLY179 GLU426 GLY429 CYS431 HIS433 (2) LYS435 | - | LYS435 |
Compound | Molecular Weight (≤500) | #H-Bond Acceptors (≤10) | #H-Bond Donors (≤5) | MLOGP (≤4.15) | Lipinski #Violations (≤1) |
---|---|---|---|---|---|
7-Hydroxycoumarin | 162.14 | 3 | 1 | 1.04 | 0 |
Apigenin-7-O-glucoside | 432.38 | 10 | 6 | −1.61 | 1 |
Apiin | 564.49 | 14 | 8 | −3.16 | 3 |
Betaine | 117.15 | 2 | 0 | −3.67 | 0 |
Epicatechin | 290.27 | 6 | 5 | 0.24 | 0 |
Pharmacokinetic Property | 7-Hydroxycoumarin | Apigenin-7-O-Glucoside | Apiin | Betaine | Epicatechin |
---|---|---|---|---|---|
Absorption | |||||
Water solubility (log mol/L) | −2.131 | −2.559 | −2.851 | 0.723 | −3.117 |
Caco2 permeability (log Papp in 10-6 cm/s) | 1.206 | 0.33 | −0.966 | 1.44 | −0.283 |
Intestinal absorption (human) (% Absorbed) | 94.551 | 37.609 | 17.411 | 100 | 68.829 |
Skin permeability (log Kp) | −2.6 | −2.735 | −2.735 | −2.78 | −2.735 |
P-glycoprotein substrate | No | Yes | Yes | Yes | Yes |
P-glycoprotein I inhibitor | No | No | No | No | No |
P-glycoprotein II inhibitor | No | No | No | No | No |
Distribution | |||||
VDss (human) (log L/kg) | 0.032 | 0.342 | 1.004 | −0.304 | 1.027 |
Fraction unbound (human) (Fu) | 0.432 | 0.218 | 0.171 | 0.875 | 0.235 |
BBB permeability (log BB) | −0.278 | −1.391 | −1.793 | −0.214 | −1.054 |
CNS permeability (log PS) | −2.741 | −3.746 | −4.972 | −2.804 | −3.298 |
Metabolism | |||||
CYP2D6 substrate | No | No | No | No | No |
CYP3A4 substrate | No | No | No | No | No |
CYP1A2 inhibitior | Yes | No | No | No | No |
CYP2C19 inhibitior | No | No | No | No | No |
CYP2C9 inhibitior | No | No | No | No | No |
CYP2D6 inhibitior | No | No | No | No | No |
CYP3A4 inhibitior | No | No | No | No | No |
Excretion | |||||
Total Clearance (log ml/min/kg) | 0.706 | 0.547 | −0.054 | 0.326 | 0.183 |
Renal OCT2 substrate | No | No | No | No | No |
Toxicity | |||||
AMES toxicity | No | No | No | No | No |
Max. tolerated dose (human) (log mg/kg/day) | 0.689 | 0.515 | 0.446 | 0.838 | 0.438 |
hERG I inhibitor | No | No | No | No | No |
hERG II inhibitor | No | No | Yes | No | No |
Oral rat acute toxicity (LD50) (mol/kg) | 2.047 | 2.595 | 2.49 | 1.654 | 2.428 |
Oral rat chronic toxicity (LOAEL) (log mg/kg_bw/day) | 1.751 | 4.359 | 4.574 | 0.254 | 2.5 |
Hepatotoxicity | Yes | No | No | No | No |
Skin sensitization | No | No | No | Yes | No |
T.Pyriformis toxicity (log ug/L) | 0.546 | 0.285 | 0.285 | −0.057 | 0.347 |
Minnow toxicity (log mM) | 1.714 | 5.507 | 3.835 | 2.97 | 3.585 |
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Vongthip, W.; Sillapachaiyaporn, C.; Kim, K.-W.; Sukprasansap, M.; Tencomnao, T. Thunbergia laurifolia Leaf Extract Inhibits Glutamate-Induced Neurotoxicity and Cell Death through Mitophagy Signaling. Antioxidants 2021, 10, 1678. https://doi.org/10.3390/antiox10111678
Vongthip W, Sillapachaiyaporn C, Kim K-W, Sukprasansap M, Tencomnao T. Thunbergia laurifolia Leaf Extract Inhibits Glutamate-Induced Neurotoxicity and Cell Death through Mitophagy Signaling. Antioxidants. 2021; 10(11):1678. https://doi.org/10.3390/antiox10111678
Chicago/Turabian StyleVongthip, Wudtipong, Chanin Sillapachaiyaporn, Kyu-Won Kim, Monruedee Sukprasansap, and Tewin Tencomnao. 2021. "Thunbergia laurifolia Leaf Extract Inhibits Glutamate-Induced Neurotoxicity and Cell Death through Mitophagy Signaling" Antioxidants 10, no. 11: 1678. https://doi.org/10.3390/antiox10111678
APA StyleVongthip, W., Sillapachaiyaporn, C., Kim, K. -W., Sukprasansap, M., & Tencomnao, T. (2021). Thunbergia laurifolia Leaf Extract Inhibits Glutamate-Induced Neurotoxicity and Cell Death through Mitophagy Signaling. Antioxidants, 10(11), 1678. https://doi.org/10.3390/antiox10111678