Chronic Ulcers Healing Prediction through Machine Learning Approaches: Preliminary Results on Diabetic Foot Ulcers Case Study
Abstract
:1. Introduction
2. Materials and Methods
2.1. Wound Viewer
2.2. Dataset
2.3. Predictive Healing
- Random Forest: An ensemble learning method that builds a collection of decision trees during training and outputs the class that is the mode of the classes predicted by individual trees [23].
- SVM (Support Vector Machine): A supervised algorithm used for classification and regression tasks. It works by finding the hyperplane that best separates data points from different classes. It maximizes the margin between the classes to achieve the optimal decision boundary [24].
- Naive/Gaussian Bayes: A family of probabilistic algorithms based on Bayes’ Theorem, which assumes that features are conditionally independent given the class label. In the Gaussian Naive Bayes algorithms, the continuous features are assumed to follow a Gaussian (normal) distribution [25].
- AdaBoost (Adaptive Boosting): An ensemble learning technique that combines multiple weak classifiers to create a strong classifier. It works by sequentially applying weak models to weighted versions of the training data, with the aim of correcting the errors made by previous models. AdaBoost adjusts the weights of misclassified data points so that subsequent classifiers focus more on these hard-to-classify points [26].
- GradientBoost: An ensemble technique that builds a model in a stage-wise fashion by combining weak learners (typically decision trees) to form a strong predictive model. It works by fitting each new model to the residual errors made by the ensemble of previous models, thus “boosting” the performance iteratively [27].
- XGBoost (Extreme Gradient Boosting) and LightGBM (Light Gradient Boosting Machine): Optimized implementations of gradient boosting, designed to improve both computational efficiency and model performance. XGBoost uses advanced regularization techniques and efficient handling of sparse data, while LightGBM focuses on speed and memory efficiency, particularly with large datasets [28,29].
- FCNN (Fully Connected Neural Network): Also known as Multilayer Perceptron (MLP), where each neuron in one layer is connected to every neuron in the next layer. It consists of an input layer, one or more hidden layers, and an output layer. FCNNs process input data through these layers by applying weighted sums, bias terms, and activation functions. They are commonly used for tasks like classification and regression. The network learns by adjusting its weights by backpropagation and the Learning Rate (LR) to minimize the error in its predictions [30].
- LSTM (Long Short-Term Memory): A type of recurrent neural network (RNN) designed to model sequential time series of data. LSTMs can capture long-term dependencies by using memory cells that store information over extended periods of time. This capability is particularly useful for tasks that involve time-series data, where the model needs to remember previous inputs for accurate predictions [31].
Data Processing and Problem Design
- If > and > and > -> the label is 1, and the wound is worsening;
- If < and < and < -> the label is 0, and the wound is healing;
- If < and > and > -> the label is 1, and the wound is worsening;
- If < and > and < -> the label is 0, and the wound is healing;
- If < and < and > -> the label is 1, and the wound is worsening;
- If > and < and > -> the label is 1, and the wound is worsening;
- If > and > and < -> the label is 0, and the wound is healing;
- If > and < and < -> the label is 0, and the wound is healing;
- If a visit is equal to the previous or the next visit, both visits are considered ones and follow the same logic.
- A total of 2 visits to predict the 3rd;
- A total of 3 visits to predict the 4th;
- A total of 5 visits to predict the 6th.
3. Case Study: Diabetic Foot Ulcers
3.1. Prediction Healing
3.2. Discussion
3.3. Future Directions: Enhanced Wound Segmentation
4. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
EHR | Electronic Health Record |
ML | Machine Learning |
DNN | Deep Neural Network |
WV | Wound Viewer |
LSTM | Long Short-Term Memory |
RNN | Recurrent neural network |
FCNN | Fully Connected Neural Network |
KNN | K-Nearest Neighbors |
SVM | Support Vector Machine |
LR | Learning Rate |
WBP | Wound Bed Preparation |
ROC | Receiver Operating Characteristic |
AUC | Area Under Curve |
TP | True Positive |
TN | True Negative |
FN | False Negative |
FP | False Positive |
References
- Graves, N.; Zheng, H. The prevalence and incidence of chronic wounds: A literature review. Wound Pract. Res. J. Aust. Wound Manag. Assoc. 2014, 22, 4–19. [Google Scholar]
- Martinengo, L.; Olsson, M.; Bajpai, R.; Soljak, M.; Upton, Z.; Schmidtchen, A.; Car, J.; Järbrink, K. Prevalence of chronic wounds in the general population: Systematic review and meta-analysis of observational studies. Ann. Epidemiol. 2019, 29, 8–15. [Google Scholar] [CrossRef] [PubMed]
- Berezo, M.; Budman, J.; Deutscher, D.; Hess, C.T.; Smith, K.; Hayes, D. Predicting chronic wound healing time using machine learning. Adv. Wound Care 2022, 11, 281–296. [Google Scholar] [CrossRef]
- Armstrong, D.G.; Tan, T.W.; Boulton, A.J.; Bus, S.A. Diabetic foot ulcers: A review. JAMA 2023, 330, 62–75. [Google Scholar] [CrossRef] [PubMed]
- Sharma, A.; Shankar, R.; Yadav, A.K.; Pratap, A.; Ansari, M.A.; Srivastava, V. Burden of chronic nonhealing wounds: An overview of the worldwide humanistic and economic burden to the healthcare system. Int. J. Low. Extrem. Wounds 2024. [Google Scholar] [CrossRef]
- Sen, C.K. Human wound and its burden: Updated 2020 compendium of estimates. Adv. Wound Care 2021, 10, 281–292. [Google Scholar] [CrossRef]
- Avishai, E.; Yeghiazaryan, K.; Golubnitschaja, O. Impaired wound healing: Facts and hypotheses for multi-professional considerations in predictive, preventive and personalised medicine. EPMA J. 2017, 8, 23–33. [Google Scholar] [CrossRef]
- Horn, S.D.; Barrett, R.S.; Fife, C.E.; Thomson, B. A predictive model for pressure ulcer outcome: The Wound Healing Index. Adv. Ski. Wound Care 2015, 28, 560–572. [Google Scholar] [CrossRef]
- Fife, C.E.; Horn, S.D.; Smout, R.J.; Barrett, R.S.; Thomson, B. A Predictive Model for Diabetic Foot Ulcer Outcome: The Wound Healing Index. Adv. Wound Care 2016, 5, 279–287. [Google Scholar] [CrossRef]
- Yang, Z.; Mitra, A.; Liu, W.; Berlowitz, D.; Yu, H. TransformEHR: Transformer-based encoder-decoder generative model to enhance prediction of disease outcomes using electronic health records. Nat. Commun. 2023, 14, 7857. [Google Scholar] [CrossRef]
- Khader, F.; Kather, J.N.; Müller-Franzes, G.; Wang, T.; Han, T.; Tayebi Arasteh, S.; Hamesch, K.; Bressem, K.; Haarburger, C.; Stegmaier, J.; et al. Medical transformer for multimodal survival prediction in intensive care: Integration of imaging and non-imaging data. Sci. Rep. 2023, 13, 10666. [Google Scholar] [CrossRef] [PubMed]
- Sharma, A.; Lysenko, A.; Jia, S.; Boroevich, K.A.; Tsunoda, T. Advances in AI and machine learning for predictive medicine. J. Hum. Genet. 2024, 69, 487–497. [Google Scholar] [CrossRef]
- Holste, G.; Lin, M.; Zhou, R.; Wang, F.; Liu, L.; Yan, Q.; Van Tassel, S.H.; Kovacs, K.; Chew, E.Y.; Lu, Z.; et al. Harnessing the power of longitudinal medical imaging for eye disease prognosis using Transformer-based sequence modeling. NPJ Digit. Med. 2024, 7, 216. [Google Scholar] [CrossRef]
- Mei, T.; Wang, T.; Zhou, Q. Multi-omics and artificial intelligence predict clinical outcomes of immunotherapy in non-small cell lung cancer patients. Clin. Exp. Med. 2024, 24, 60. [Google Scholar] [CrossRef] [PubMed]
- Patel, Y.; Shah, T.; Dhar, M.K.; Zhang, T.; Niezgoda, J.; Gopalakrishnan, S.; Yu, Z. Integrated image and location analysis for wound classification: A deep learning approach. Sci. Rep. 2024, 14, 7043. [Google Scholar] [CrossRef]
- Sharma, A.; Vans, E.; Shigemizu, D.; Boroevich, K.A.; Tsunoda, T. DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture. Sci. Rep. 2019, 9, 11399. [Google Scholar] [CrossRef] [PubMed]
- Secco, J.; Spinazzola, E.; Pittarello, M.; Ricci, E.; Pareschi, F. Clinically validated classification of chronic wounds method with memristor-based cellular neural network. Sci. Rep. 2024, 14, 30839. [Google Scholar] [CrossRef]
- Secco, J.; Pittarello, M.; Begarani, F.; Sartori, F.; Corinto, F.; Ricci, E. Memristor Based Integrated System for the Long-Term Analysis of Chronic Wounds: Design and Clinical Trial. In Proceedings of the 2022 29th IEEE International Conference on Electronics, Circuits and Systems (ICECS), Glasgow, UK, 24–26 October 2022; pp. 1–4. [Google Scholar]
- Zoppo, G.; Marrone, F.; Pittarello, M.; Farina, M.; Uberti, A.; Demarchi, D.; Secco, J.; Corinto, F.; Ricci, E. AI technology for remote clinical assessment and monitoring. J. Wound Care 2020, 29, 692–706. [Google Scholar] [CrossRef]
- Kręcichwost, M.; Czajkowska, J.; Wijata, A.; Juszczyk, J.; Pyciński, B.; Biesok, M.; Rudzki, M.; Majewski, J.; Kostecki, J.; Pietka, E. Chronic wounds multimodal image database. Comput. Med. Imaging Graph. 2021, 88, 101844. [Google Scholar] [CrossRef]
- Steinbach, M.; Tan, P.N. kNN: K-nearest neighbors. In The Top Ten Algorithms in Data Mining; Chapman and Hall/CRC: Boca Raton, FL, USA, 2009; pp. 165–176. [Google Scholar]
- Peterson, L.E. K-nearest neighbor. Scholarpedia 2009, 4, 1883. [Google Scholar] [CrossRef]
- Biau, G.; Scornet, E. A random forest guided tour. Test 2016, 25, 197–227. [Google Scholar] [CrossRef]
- Noble, W.S. What is a support vector machine? Nat. Biotechnol. 2006, 24, 1565–1567. [Google Scholar] [CrossRef] [PubMed]
- Dani, Y.; Ginting, M.A. Comparison of Iris dataset classification with Gaussian naïve Bayes and decision tree algorithms. Int. J. Electr. Comput. Eng. (2088-8708) 2024, 14, 1959. [Google Scholar] [CrossRef]
- Margineantu, D.D.; Dietterich, T.G. Pruning adaptive boosting. In Proceedings of the ICML. Citeseer, Nashville, TN, USA, 8–12 July 1997; Volume 97, pp. 211–218. [Google Scholar]
- Natekin, A.; Knoll, A. Gradient boosting machines, a tutorial. Front. Neurorobotics 2013, 7, 21. [Google Scholar] [CrossRef]
- Chen, T.; He, T.; Benesty, M.; Khotilovich, V.; Tang, Y.; Cho, H.; Chen, K.; Mitchell, R.; Cano, I.; Zhou, T.; et al. Xgboost: Extreme gradient boosting. In R Package Version 0.4-2, 2015; Volume 1, pp. 1–4. Available online: https://github.com/dmlc/xgboost (accessed on 21 April 2025).
- Ke, G.; Meng, Q.; Finley, T.; Wang, T.; Chen, W.; Ma, W.; Ye, Q.; Liu, T.Y. Lightgbm: A highly efficient gradient boosting decision tree. Adv. Neural Inf. Process. Syst. 2017, 30. Available online: https://proceedings.neurips.cc/paper/2017/hash/6449f44a102fde848669bdd9eb6b76fa-Abstract.html (accessed on 21 April 2025).
- Basha, S.S.; Dubey, S.R.; Pulabaigari, V.; Mukherjee, S. Impact of fully connected layers on performance of convolutional neural networks for image classification. Neurocomputing 2020, 378, 112–119. [Google Scholar] [CrossRef]
- Sherstinsky, A. Fundamentals of recurrent neural network (RNN) and long short-term memory (LSTM) network. Phys. D Nonlinear Phenom. 2020, 404, 132306. [Google Scholar] [CrossRef]
- Devnath, L.; Janzen, I.; Lam, S.; Yuan, R.; MacAulay, C. Predicting future lung cancer risk in low-dose CT screening patients with AI tools. In Proceedings of the Medical Imaging 2025: Computer-Aided Diagnosis, San Diego, CA, USA, 16–21 February 2025; Volume 13407, pp. 634–639. [Google Scholar] [CrossRef]
- Téot, L.; Geri, C.; Lano, J.; Cabrol, M.; Linet, C.; Mercier, G. Complex Wound Healing Outcomes for Outpatients Receiving Care via Telemedicine, Home Health, or Wound Clinic: A Randomized Controlled Trial. Int. J. Low. Extrem. Wounds 2020, 19, 197–204. [Google Scholar] [CrossRef]
- Picaud, G.; Chaumont, M.; Subsol, G.; Téot, L. SSL Based Encoder Pretraining for Segmenting a Heterogeneous Chronic Wound Image Database with Few Annotations. In Diabetic Foot Ulcers Grand Challenge; Springer: Berlin/Heidelberg, Germany, 2024; pp. 71–80. [Google Scholar]
Models Accuracy | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
N. Visits: 3 | N. Visits: 4 | N. Visits: 6 | ||||||||
Model | Architecture | WBP | Exudate | Tissue Status | WBP | Exudate | Tissue Status | WBP | Exudate | Tissue Status |
LSTM | 1 | 55% | 61% | 49% | 71% | 80% | 49% | 61% | 75% | 50% |
LSTM | 2 | 66% | 60% | 50% | 70% | 85% | 56% | 65% | 75% | 51% |
FCNN | 3 | 42% | 54% | 61% | 63% | 62% | 44% | 59% | 75% | 52% |
KNN | 4 | 62% | 48% | 53% | 73% | 81% | 55% | 65% | 70% | 52% |
Random Forest | 5 | 60% | 62% | 54% | 76% | 71% | 55% | 71% | 72% | 55% |
SVM | 6 | 51% | 58% | 50% | 78% | 80% | 55% | 70% | 70% | 55% |
Naive Bayes | 7 | 39% | 48% | 56% | 72% | 81% | 49% | 70% | 71% | 50% |
Gaussian Naive Bayes | 8 | 61% | 41% | 49% | 78% | 82% | 55% | 71% | 70% | 51% |
AdaBoost | 9 | 55% | 60% | 56% | 75% | 82% | 55% | 72% | 73% | 52% |
Gradient Boost [3] | 10 | 59% | 60% | 55% | 70% | 79% | 47% | 71% | 75% | 53% |
XGBoost | 11 | 62% | 58% | 59% | 77% | 79% | 55% | 70% | 75% | 51% |
LightGBM | 12 | 61% | 58% | 56% | 79% | 80% | 58% | 71% | 71% | 53% |
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Spinazzola, E.; Picaud, G.; Becchi, S.; Pittarello, M.; Ricci, E.; Chaumont, M.; Subsol, G.; Pareschi, F.; Teot, L.; Secco, J. Chronic Ulcers Healing Prediction through Machine Learning Approaches: Preliminary Results on Diabetic Foot Ulcers Case Study. J. Clin. Med. 2025, 14, 2943. https://doi.org/10.3390/jcm14092943
Spinazzola E, Picaud G, Becchi S, Pittarello M, Ricci E, Chaumont M, Subsol G, Pareschi F, Teot L, Secco J. Chronic Ulcers Healing Prediction through Machine Learning Approaches: Preliminary Results on Diabetic Foot Ulcers Case Study. Journal of Clinical Medicine. 2025; 14(9):2943. https://doi.org/10.3390/jcm14092943
Chicago/Turabian StyleSpinazzola, Elisabetta, Guillaume Picaud, Sara Becchi, Monica Pittarello, Elia Ricci, Marc Chaumont, Gérard Subsol, Fabio Pareschi, Luc Teot, and Jacopo Secco. 2025. "Chronic Ulcers Healing Prediction through Machine Learning Approaches: Preliminary Results on Diabetic Foot Ulcers Case Study" Journal of Clinical Medicine 14, no. 9: 2943. https://doi.org/10.3390/jcm14092943
APA StyleSpinazzola, E., Picaud, G., Becchi, S., Pittarello, M., Ricci, E., Chaumont, M., Subsol, G., Pareschi, F., Teot, L., & Secco, J. (2025). Chronic Ulcers Healing Prediction through Machine Learning Approaches: Preliminary Results on Diabetic Foot Ulcers Case Study. Journal of Clinical Medicine, 14(9), 2943. https://doi.org/10.3390/jcm14092943