Wheat Seed Phenotype Detection Device and Its Application
Abstract
:1. Introduction
2. Data and Methods
2.1. Wheat Seed
2.2. Wheat Seed Phenotypic Characteristic Detection System
2.2.1. Image Acquisition Device
2.2.2. Sampling Hole Plate
2.2.3. Image Acquisition Software Platform
2.2.4. Wheat Seed Phenotyping Detection Process
2.3. Image Acquisition Methods
2.4. Image Preprocessing
2.5. Feature Extraction
2.6. Thousand Seed Weight Measurement Method
2.7. Model Construction and Accuracy Evaluation
3. Results and Discussion
3.1. Effect of Sampling Hole Plate on Parameters
3.1.1. Average Error
3.1.2. Variance
3.2. Distribution of Phenotypic Characteristic Parameters of Wheat Seeds
3.3. Correlation Analysis of Seed Phenotypic Characteristics and Thousand Seed Weight
3.4. Parameters and Thousand Seed Weight Model
3.4.1. Models Built
3.4.2. Model Comparison Analysis
3.5. Discussion
4. Conclusions
- A wheat seed phenotypic characteristic parameter detection system was established to extract the phenotypic characteristic parameters of five wheat seeds: Luomai 26, Zhoumai 22, Luomai 42, Jinqiang 11, and Bainong 207. The distributions of phenotypic characteristic parameters showed that Luomai 26, Zhoumai 22, and Luomai 42 were the larger seeds among the five varieties, and Bainong 207 was the smaller seed. Jinqiang 11 had the largest perimeter and long axis, and the smalleat short axis, ellipticity, and elongation; thus, the seeds were elongated. Luomai 42 had the largest roundness with a small difference between the long and short axes.
- The correlations between the phenotypic characteristic parameters of wheat seeds and thousand seed weight were analysed. The results showed that most of thousand seed weight of wheat seeds were correlated with the area, perimeter, long axis, and short axis. The phenotypic characteristics with significant correlations were different for various varieties of wheat seeds. Among them, the correlations between area, short axis, and thousand seed weight of Luomai 26 reached highly significant levels (p < 0.01) with coefficients of 0.73 and 0.63; the area, long axis, short axis, perimeter, and rectangularity of Jinqiang 11 all had highly significant correlations (p < 0.01) with the thousand seed weight with coefficients of 0.928, 0.837, 0.901, 0.850, and 0.658, respectively. The correlation between the area, perimeter and thousand seed weight of Zhoumai 22 reached a highly significant level (p < 0.01) with correlation coefficients of 0.61 and 0.654; the correlation between area and thousand seed weight of Luomai 42 reached a highly significant level (p < 0.01) with a correlation coefficient of 0.727; the correlations between area, short axis, perimeter, and thousand seed weight of Bainong 207 reached highly significant levels (p < 0.01) with correlation coefficients of 0.86, 0.711, and 0.751.
- A multiple linear regression model was developed using significantly correlated phenotypic parameters, in which the R2 of the prediction models for Jinqiang 11 and Bainong 207 were 0.853 and 0.757, respectively; the R2 of the prediction models for Luomai 26, Zhoumai 22, and Luomai 42 were all lower than 0.5. The models were further validated by selecting wheat seeds with thousand seed weights of 40–50 g, in which the R2 of the prediction models for Meichun 101, Luohan 7, and Luomai 38 were 0.575, 0.815, and 0.569, respectively. The modelling and validation showed that the model established in this paper had better results in predicting the thousand seed weight of wheat seeds when the thousand seed weight was 44–47 g.
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Varieties | Average Errors of 1 mm Hole Plate (mm) | Average Errors of 2 mm Hole Plate (mm) | Average Errors of 3 mm Hole Plate (mm) |
---|---|---|---|
Luomai 26 | 0.199362 | 0.296986 | 0.492199 |
Jinqiang 11 | 0.093554 | 0.199852 | 0.631647 |
Zhoumai 22 | 0.148807 | 0.216848 | 0.422150 |
Luomai 42 | 0.146492 | 0.289650 | 0.316111 |
Bainong 207 | 0.341720 | 0.081696 | 0.402236 |
Hole Plate | Varieties | Variance | Total Variance | ||||||
---|---|---|---|---|---|---|---|---|---|
Area | Long Axis | Short Axis | Perimeter | Ellipticity | Rectangularity | Elongation | |||
1 mm | Luomai 26 Jinqiang 11 | 0.0422 | 0.0024 | 0.0009 | 0.0337 | 0.0000 | 0.0000 | 0.0009 | 0.0802 |
0.0151 | 0.0012 | 0.0003 | 0.0100 | 0.0000 | 0.0002 | 0.0000 | 0.0269 | ||
Zhoumai 22 | 0.0151 | 0.0042 | 0.0008 | 0.0133 | 0.0000 | 0.0000 | 0.0000 | 0.0334 | |
Luomai 42 | 0.0241 | 0.0060 | 0.0015 | 0.0181 | 0.0000 | 0.0000 | 0.0000 | 0.0497 | |
Bainong 207 | 0.0404 | 0.0015 | 0.0008 | 0.0258 | 0.0000 | 0.0000 | 0.0001 | 0.0686 | |
2 mm | Luomai 26 | 0.0006 | 0.0000 | 0.0000 | 0.0002 | 0.0000 | 0.0000 | 0.0003 | 0.0011 |
Jinqiang 11 | 0.0031 | 0.0001 | 0.0001 | 0.0007 | 0.0000 | 0.0000 | 0.0000 | 0.0040 | |
Zhoumai 22 | 0.0002 | 0.0000 | 0.0000 | 0.0001 | 0.0000 | 0.0000 | 0.0000 | 0.0004 | |
Luomai 42 | 0.0026 | 0.0001 | 0.0000 | 0.0008 | 0.0000 | 0.0000 | 0.0010 | 0.0044 | |
Bainong 207 | 0.0521 | 0.0002 | 0.0001 | 0.0001 | 0.0000 | 0.0000 | 0.0007 | 0.0533 | |
3 mm | Luomai 26 | 0.0087 | 0.0006 | 0.0002 | 0.0068 | 0.0000 | 0.0000 | 0.0022 | 0.0185 |
Jinqiang 11 | 0.0745 | 0.0033 | 0.0011 | 0.0404 | 0.0000 | 0.0000 | 0.0023 | 0.1217 | |
Zhoumai 22 | 0.0067 | 0.4495 | 0.0001 | 0.0016 | 0.0000 | 0.0000 | 0.0010 | 0.4588 | |
Luomai 42 | 0.0291 | 0.0019 | 0.0008 | 0.0217 | 0.0000 | 0.0000 | 0.0000 | 0.0534 | |
Bainong 207 | 0.0076 | 0.0004 | 0.0001 | 0.0283 | 0.0000 | 0.0000 | 0.0000 | 0.0365 |
Varieties | Multiple Linear Regression Model | R2 | RMSE | Measured TSW (g) |
---|---|---|---|---|
Luomai 26 | 0.497 | 0.668 | 50.800 | |
Jinqiang 11 | 0.853 | 0.450 | 44.410 | |
Zhoumai 22 | 0.345 | 0.605 | 50.585 | |
Luomai 42 | 0.493 | 0.690 | 50.665 | |
Bainong 207 | 0.757 | 0.470 | 44.505 |
Varieties | Multiple Linear Regression Model | R2 | RMSE | Measured TSW (g) |
---|---|---|---|---|
Meichun 101 | 0.575 | 0.605 | 42.815 | |
Luohan 7 | 0.815 | 0.599 | 47.470 | |
Luomai 38 | 0.569 | 0.723 | 49.385 |
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Zhang, H.; Ji, J.; Ma, H.; Guo, H.; Liu, N.; Cui, H. Wheat Seed Phenotype Detection Device and Its Application. Agriculture 2023, 13, 706. https://doi.org/10.3390/agriculture13030706
Zhang H, Ji J, Ma H, Guo H, Liu N, Cui H. Wheat Seed Phenotype Detection Device and Its Application. Agriculture. 2023; 13(3):706. https://doi.org/10.3390/agriculture13030706
Chicago/Turabian StyleZhang, Haolei, Jiangtao Ji, Hao Ma, Hao Guo, Nan Liu, and Hongwei Cui. 2023. "Wheat Seed Phenotype Detection Device and Its Application" Agriculture 13, no. 3: 706. https://doi.org/10.3390/agriculture13030706
APA StyleZhang, H., Ji, J., Ma, H., Guo, H., Liu, N., & Cui, H. (2023). Wheat Seed Phenotype Detection Device and Its Application. Agriculture, 13(3), 706. https://doi.org/10.3390/agriculture13030706