Severity Grading and Early Detection of Alzheimer’s Disease through Transfer Learning
Abstract
:1. Introduction
2. Related Work
3. Materials and Methods
3.1. Transfer Learning
3.1.1. AlexNet
3.1.2. ResNet-50
3.1.3. GoogleNet (InceptionV3)
3.1.4. SqueezeNet
4. Results
4.1. k-Fold Cross-Validation
4.2. Partitioning the Dataset into Training and Test Sets
5. Conclusions
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
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References | Computational Techniques | Study Objectives | Datasets | Results | Years |
---|---|---|---|---|---|
Brain MRI analysis for Alzheimer’s disease diagnosis using an ensemble system of deep convolutional neural networks [18] | A deep convolutional neural network is proposed for early-stage Alzheimer’s disease diagnosis using brain MRI data analysis, outperforming existing binary classification methods, and outperforming baselines in experiments. | The study offers a deep CNN capable of identifying and classifying Alzheimer’s disease, demonstrating superiority and capability in performance on a small dataset, and efficiently approaching imbalanced data to train and learn. | Data obtained from Open Access Series of Imaging Studies OASIS. | The presented model achieves an accuracy rate of 93.18%, with precision of 94%, recall of 93%, and a f1-score of 92%. | 2018 |
Transfer Learning With Intelligent Training Data Selection for Prediction of Alzheimer’s Disease [16] | A transfer learning VGG, pre-processing the dataset includes images while applying image entropy to select the most relevant information. | Lowering the reliance on large data training while applying the layer-wise transfer learning to examine the training size impacts. | The dataset has been acquired by the benchmark dataset for deep learning based on Alzheimer’s Disease Neuroimaging Initiative (ADNI). | Results technique has shown a 10–20 times smaller data size improvement in accuracy (4–7%) in classification problems involving AD vs. NC, AD vs. MCI, and MCI vs. NC. | 2019 |
Neuroimaging and Machine Learning for Dementia Diagnosis: Recent Advancements and Future Prospects [19] | A comprehensive survey of automated diagnostic methods for dementia that utilizes medical image analysis through machine learning algorithms published in recent years. | To discuss the most recent neuroimaging procedures in the field of dementia diagnosis for clinical applications and Evaluating deep learning approaches in early-stage detection of dementia. | (ADNI), (OASIS), Australian Imaging, Biomarker and Lifestyle Flagship Study of Ageing (AIBL), and CAD Dementia, structural brain MRI scans. | Considering the current diagnostic approaches for AD using MRI scans, it is essential to work on diagnosing other types of dementia, such as FTD, VD, and PD. Deep learning techniques approaches outperform brain images obtained, rather than the conventional ML, in terms of accuracy and early diagnosis of dementia. | 2019 |
Ensembles of Patch-Based Classifiers for Diagnosis of Alzheimer’s Diseases [20] | Feature extractors and softmax cross-entropy (CNNs) classifier, while the addressed framework consists of three individual models for generating decisions. | Accuracy, overfitting issues, and proven brain landmarks for discernible AD diagnosis features on both the left and right hippocampus areas. | National Research Center for Dementia (GARD), Gwangju Alzheimer’s and Related Dementia dataset | Achieving 90.05% accuracy compared to the other state-of-the-art models on the same dataset. | 2019 |
A Data Augmentation-Based Framework to Handle Class Imbalance Problem for Alzheimer’s Stage Detection [21] | TL using data augmentation for 3D Magnetic Resonance Imaging (MRI) | TL for multiclass AD with pre-trained AlexNet model. Two approaches for the brain and 3D brain MRI view while considering an extensive image augmentation to avoid overfitting issues. | From the publicly available dataset (OASIS). | The presented model’s accuracy utilizing a 3D view of the brain MRI is 95.11%, whereas using a one-sided view is 98.41%. | 2019 |
Optimized One vs One Approach in Multiclass Classification for Early Alzheimer’s Disease and Mild Cognitive Impairment Diagnosis [22] | A pairwise t-test feature selection is employed to estimate selected features onto a Partial-Least-Squares multiclass subspace for one vs one output error correction. | To improve accuracy and reduce dependency on large data trained. | the data from the international challenge for automated prediction of MCI from MRI data to address the multiclass classification problem. | The proposed multiclass classification approach outperformed with 67% accuracy, illustrating the robustness towards small fluctuations. | 2020 |
Spatial-Temporal Dependency Modeling and Network Hub Detection for Functional MRI Analysis via Convolutional-Recurrent Network [23] | An end-to-end deep learning Spatial-Temporal convolutional-recurrent neural Network (STNet) model | To predict Alzheimer’s disease automatically considering the use of progression and network hub detection implying rs-fMRI time series. | The rs-fMRI time-series data collected from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database1 were studied in this paper. | Results from experiments conducted on 563 rs-fMRI images from the ADNI database show that the employed approach can both enhance classification performance when compared to cutting-edge techniques and offer new perspectives on the pathogenic cascade that underlies AD. | 2020 |
Resting-State fMRI and Improved Deep Learning Algorithm for Earlier Detection of Alzheimer’s Disease [24] | Using an Improved Deep Learning Algorithm (IDLA) which utilizes resting state fMRI along with important un-identifying information such as age and sex. It also utilizes autoencoder customization for the categorization of MCIs vs. NCs. | Detecting Early-stage Alzheimer’s disease considers deep neural network data. | ADNI-2 fMRI data in the ADNI database | The methodology proposed increases diagnostic accuracy by approximately 25% compared with traditional approaches, which means combining the brain with improved deep learning is an excellent way to diagnose neurological disorders early. | 2020 |
Diagnosing Alzheimer’s Disease Based on Multiclass MRI Scans using Transfer Learning Techniques [25] | They used whole slide 2-dimension (2D) images to classify AD mild cognitive impairment and normal control subjects using state-of-the-art CNN base models. Also, they evaluated their effectiveness using an AD Neuroimaging Initiative dataset and demonstrated uniqueness using MR images. | Early Alzheimer’s diagnosis and classification are crucial for preventing dementia progression in medical image analysis. Therefore, the primary objective was to use Deep learning techniques to detect early Alzheimer’s disease. | The study uses the (ADNI) brain MR images. | Three models split data to 70:30 ration training and testing, respectively. The top result was shown by ResNet-101, with 98.37% accuracy and outstanding performance in multiclass classification, is the best out of the three. | 2020 |
Deep Learning of Static and Dynamic Brain Functional Networks for Early MCI Detection [26] | CNN framework to simultaneously learn embedded features from BFNs for brain disease diagnosis. | To learn deeply embedded spatial patterns of the static and dynamic BFNs for eMCI diagnosis. | A rigorously collected, publicly accessible, multisite Alzheimer’s Disease Neuroimaging Initiative 2 (ADNI2) dataset | Significant diagnostic performance improvement by almost 10%, including deep learning’s efficiency in the preclinical diagnosis of Alzheimer’s disease, according to the intricate and multidimensional voxel-wise spatiotemporal patterns of the brain’s functional connectomics at rest. | 2020 |
A 3D densely connected convolution neural network with connection-wise attention mechanism for Alzheimer’s disease classification [27] | The paper introduces CAM-CNN, an enhanced densely connected network with a connection-wise attention mechanism From pre-processed images, it extracts multi-scale features and uses a connection-wise attention technique to integrate connections between layers. To distinguish AD, MCI converters, and non-converters, the approach was tested on 968 participants’ baseline MRIs Using data from each 3D convolution layer. | The study proposes a deep learning method for efficient detection and prediction of Alzheimer’s disease (AD) using a densely connected convolution neural network and connection-wise attention mechanism. | Collected from ADNI. | The proposed algorithm outperformed previous methods in distinguishing AD patients from healthy controls, with a 97.35% accuracy rate, MCI converters vs. Healthy subjects with 87.82%, MCI converters vs. non-converters with 78.79%. | 2021 |
Deep learning-based pipelines for Alzheimer’s disease diagnosis: A comparative study and a novel deep-ensemble method [17] | The study uses a deep learning approach to apply transfer learning techniques to CNN architectures pre-trained on Imagenet. The top three networks are AlexNet, Inception-ResNet-v2, ResNet-50, ResNet-101, and GoogLeNet. After fine-tuning, they are combined and classified using an ensemble bagged trees model. | This study presents an automated deep-ensemble approach for dementia-level classification from brain images, compares deep learning architectures, and evaluates robustness in detecting Alzheimer’s disease and different dementia levels. | Data acquired from OASIS, KAGGLE, and ADNI. | The proposed strategy, tested on three MRI and one fMRI datasets, achieved an accuracy of 98.51% in binary classification (different levels of dementia recognition) and 98.67% in multiclass classification, surpassing cutting-edge methods. | 2021 |
Brain Asymmetry Detection and Machine Learning Classification for Diagnosis of Early Dementia [28] | The study introduces a new method for early dementia diagnosis using an asymmetry segmentation algorithm, allowing visualization of differences between brain hemispheres, simplifying feature engineering, and offering an advantage over existing methods. | The proposed pipeline offers a cost-effective solution for classifying dementia and possibly other brain degenerative disorders influenced by changes in brain asymmetries. | Acquired from the ADNI database | The C-SVM and Q-SVM showed the best performance among SVM variants. The C-SVM accuracy of EMCI vs. NC, AD vs. NC, and AD vs. EMCI was 92.5%, 93.0%, 93.0%, and 85.0%, respectively. The Q-SVM accuracy of EMCI vs. NC, AD vs. NC, and AD vs. EMCI was 92.5% and 92.5%, sensitivity and specificity, respectively. The CNN’s prediction results are comparable to those of other classifiers. | 2021 |
Differentiating Dementia with Lewy Bodies and Alzheimer’s Disease by Deep Learning to Structural MRI [29] | ResNet was implemented due to its unique characteristics in preserving features in 3D images while performing similarly to other Convolutional Neural Networks. | This study explores the potential of a deep learning technique to distinguish between Alzheimer’s Disease (AD) and Dementia with Lewy Bodies (DLB) through structural MRI data, compared to traditional voxel-based morphometry (VBM). | 208 participants, 101 DLB, 69 AD, and 38 controls, which it was obtained from Wellcome Department of Imaging Neuroscience, University College London, UK, www.fil.ion. | Conventional statistical analysis showed no significant atrophy, but the deep learning method accurately distinguished DLB from AD with 79.15% accuracy and the conventional method with 68.41%, confirming fine differences that conventional methods may underestimate. | 2021 |
Comparison Of Machine Learning approaches for enhancing Alzheimer’s disease classification [30] | The study developed three machine learning-based MRI data classifiers to predict Alzheimer’s disease (AD) and infer brain regions. They were compared to each other, SVM, VGGNet, and ResNet, and a transfer learning strategy was applied to improve performance and efficiency. | This study compares three models, one SVM-based and two deep learning algorithms, 3D-VGGNet and 3D-ResNet, for predicting Alzheimer’s Disease (AD) and identifying brain regions contributing to disease progression. | A total of 560 images were acquired from ADNI; T1-weighted MR. | The ResNet model outperformed the other two classifiers in detecting Alzheimer’s disease (AD) in elderly control subjects with an accuracy of 90% for SVM, 95% for VGGNet, and 95% for ResNet. | 2021 |
Analysis of Features of Alzheimer’s Disease: Detection of Early Stage from Functional Brain Changes in Magnetic Resonance Images Using a Fine-tuned ResNet18 Network [31] | proposed fine-tuning model uses ResNet-18, consisting of 3 × 3 filters, 1 × 1 filter, and a fully connected layer; last layer softmax layer. The model adapts pre-trained parameters to the new dataset by unfreezing all layers. | The paper shows a deep learning-based method for predicting MCI, early MCI, late MCI, and AD using hippocampal fMRI data from the ADNI database for early diagnosis. | Data from The ADNI; fMRI dataset. A total of 138 subjects were used for evaluation. | The proposed model performed exceptionally compared to other models with classification accuracy of 99 99.99%, 99.95%, and 99.95% on EMCI vs. AD, LMCI vs. AD and MCI vs. EMCI classification scenarios, respectively. | 2021 |
An Intelligent System for Early Recognition of Alzheimer’s Disease Using Neuroimaging [32] | Testing the AD multiclass classification’s performance with ResNet18 and DenseNet201. | The study explores the challenge of using randomized concatenated deep features from two pre-trained models that extract discriminative features from MRI images of brain functional networks. | The data was acquired from the ADNI. A total of 138 MRI scans, 25 AD, 25 CN, 25 SMC, 25 EMCI, 13 MCI and 25 LMCI scans. | The proposed model achieved 98.86% accuracy, 98.94% precision, and 98.89% recall in multiclass classification, demonstrating its potential for predicting neurodegenerative brain diseases like Alzheimer’s disease. | 2022 |
Label | Count |
---|---|
Moderate Demented | 64 |
Mild Demented | 896 |
Very Mild Demented | 2240 |
Non-Demented | 3200 |
Images’ Class | Pre Augmentation Quantity | Zoom | Flip Top to Bottom | Sample | Post Augmentation Quantity | ||
---|---|---|---|---|---|---|---|
Probability | Min Factor | Max Factor | |||||
Mild Demented | 896 | 0.3 | 0.8 | 1.5 | 0.4 | 2304 | 3200 |
Moderate Demented | 64 | 0.3 | 0.8 | 1.5 | 0.4 | 3136 | 3200 |
Non-Demented | 3200 | 0.3 | 0.8 | 1.5 | 0.4 | None | 3200 |
Very Mild Demented | 2240 | 0.3 | 0.8 | 1.5 | 0.4 | 960 | 3200 |
Label | Count |
---|---|
Moderate Demented | 3200 |
Mild Demented | 3200 |
Very Mild Demented | 3200 |
Non-Demented | 3200 |
AlexNet Overall Confusion Matrix | Average Accuracy | ||||
---|---|---|---|---|---|
Mild Demented | 98.66% | 0.34% | 0.03% | 0.97% | 98.05% |
Moderate Demented | 0.00% | 100.00% | 0.00% | 0.00% | |
Non- Demented | 0.03% | 0.03% | 98.91% | 1.03% | |
Very Mild Demented | 4.13% | 0.25% | 0.97% | 94.66% | |
Mild Demented | Moderate Demented | Non- Demented | Very Mild Demented |
InceptionV3 Overall Confusion Matrix | Average Accuracy | ||||
---|---|---|---|---|---|
Mild Demented | 98.59% | 0.06% | 0.09% | 1.25% | 97.80% |
Moderate Demented | 0.06% | 99.94% | 0.00% | 0.00% | |
Non- Demented | 0.28% | 0.00% | 98.44% | 1.28% | |
Very Mild Demented | 4.25% | 0.06% | 1.47% | 94.22% | |
Mild Demented | Moderate Demented | Non- Demented | Very Mild Demented |
ResNet-50 Overall Confusion Matrix | Average Accuracy | ||||
---|---|---|---|---|---|
Mild Demented | 92.88% | 1.03% | 0.63% | 5.47% | 91.11% |
Moderate Demented | 2.97% | 95.19% | 0.00% | 1.84% | |
Non- Demented | 2.44% | 0.47% | 93.16% | 3.94% | |
Very Mild Demented | 11.63% | 1.25% | 3.91% | 83.22% | |
Mild Demented | Moderate Demented | Non- Demented | Very Mild Demented |
ResNet-50 Overall Confusion Matrix | Average Accuracy | ||||
---|---|---|---|---|---|
Mild Demented | 83.94% | 0.53% | 2.19% | 13.34% | 86.37% |
Moderate Demented | 0.66% | 98.91% | 0.03% | 0.41% | |
Non- Demented | 1.28% | 0.00% | 88.13% | 10.59% | |
Very Mild Demented | 9.69% | 0.22% | 15.56% | 74.53% | |
Mild Demented | Moderate Demented | Non- Demented | Very Mild Demented |
Model | Accuracy | Precision | Recall | F1-Score |
---|---|---|---|---|
AlexNet | 96.616% | 96.621% | 96.619% | 96.620% |
GoogleNet (InceptionV3) | 94.776% | 94.784% | 94.775% | 94.779% |
ResNet-50 | 94.363% | 94.341% | 94.363% | 94.352% |
SeqeezNet | 91.602% | 92.207% | 91.601% | 91.904% |
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Alqahtani, S.; Alqahtani, A.; Zohdy, M.A.; Alsulami, A.A.; Ganesan, S. Severity Grading and Early Detection of Alzheimer’s Disease through Transfer Learning. Information 2023, 14, 646. https://doi.org/10.3390/info14120646
Alqahtani S, Alqahtani A, Zohdy MA, Alsulami AA, Ganesan S. Severity Grading and Early Detection of Alzheimer’s Disease through Transfer Learning. Information. 2023; 14(12):646. https://doi.org/10.3390/info14120646
Chicago/Turabian StyleAlqahtani, Saeed, Ali Alqahtani, Mohamed A. Zohdy, Abdulaziz A. Alsulami, and Subramaniam Ganesan. 2023. "Severity Grading and Early Detection of Alzheimer’s Disease through Transfer Learning" Information 14, no. 12: 646. https://doi.org/10.3390/info14120646
APA StyleAlqahtani, S., Alqahtani, A., Zohdy, M. A., Alsulami, A. A., & Ganesan, S. (2023). Severity Grading and Early Detection of Alzheimer’s Disease through Transfer Learning. Information, 14(12), 646. https://doi.org/10.3390/info14120646