In this study, we obtained longitudinal data on the AMU for pigs from Germany between the years 2013 and 2020 by measuring the treatment frequencies as described for the antimicrobial classes and substances and different indications for treatment. In addition, we analysed the usage patterns in the form of weighted TF by different classification systems, concentrating on the antimicrobials considered the highest priority critically important: third- and fourth-generation cephalosporins, fluoroquinolones, polymyxins, and macrolides. In general, the results of this analysis should help with assessing the practicability of the existing lists so that these lists can be implemented into national treatment guidelines, including dividing the list into first-, second-, and third-line antimicrobials. Such guidelines should support veterinarians in making treatment decisions.
3.1. Evaluation of Methods and Results
The TF methods of analyses presented here (Formula (2)) follow the concept reported by Merle et al. [
26]. The TF is consistent with the therapy incidence (TI) used by other authors [
32,
33,
34]. However, unlike most calculations, we used the current body weight under therapy and the used daily doses (UDDs) in place of an average body weight and defined daily dose animal (DDD; the assumed average dose per kilogram of animal per species per day) [
35]. In general, these calculations are more precise, as the ADFs in Germany contain the necessary data on the total amount of antimicrobials dispensed by number of animals treated and treatment days, enabling the direct use of the UDD. Following the results from Kasabova et al. [
20]—where the median TF
UDD for piglets was 3.4 and the TF
DDD was 6.2, and the median TF
UDD for fattening pigs was 4.7 and the TF
DDD was 5.6—we regarded the UDD as being more accurate and less prone to bias. In conclusion, in production types, where the weights of the animals vary considerably, the DDD underestimates the TF of animals weighing less than the standard weight at the beginning of a production cycle, whereas it overestimates the TF at the end of a cycle when the animals weigh more than the standard weight.
Because the ADFs also indicate the production type of a treated animal species, we separately analysed the AMU for the different groups, the necessity of which has been described by authors such as Jensen et al. [
36] and the EMA [
14,
15,
16]. Similarly, in the German official system, separate benchmarking values are calculated for weaners and fattening pigs. In our study, we stratified pig production into four groups based on the information given in the ADFs: sows, piglets, weaners, and fattening pigs [
31]. Other authors summarised sows and piglets [
36,
37] or analysed data for all production types combined [
38], which may have restricted the direct comparability of their results with those of other studies [
39,
40].
3.3. AMU Changes
In our study, an overall reduction occurred in the total treatment frequency in all types of production, which was accompanied by a rise in the number of holdings without any antimicrobial usage. This is in agreement with the new legislation issued in 2013 demanding an overall reduction in AMU [
25]. It also applies to the TF documented by the official benchmarking system, where the TF for weaners dropped from 4.793 to 2.759 (−42%) and for fattening pigs from 1.199 to 0.417 (−65%) between 2015 and 2020 [
43]. The reductions in the TF in our study for the same period are higher than reported in the official numbers: weaners (−90%), fattening pigs (−50%), piglets (−67%), and sows (−33%). This could indicate that participating veterinarians were more interested in reducing AMU. However, as the general reducing trends were the same, we assume that this did not have a substantial impact on the overall pattern of reduction.
The overall reduction also applied to the amount of antimicrobial substances sold in Germany for all animal species, as documented by the official reports on sales data. Here, a reduction of −60% occurred between 2011 and 2019 [
44]. For 2020, the official results show a rise in sales data on antimicrobial substances for the first time since 2011 (+4.6%), as well as a rise in the official TF (+2.7% for weaners and +16.6% for fattening pigs) [
43], but not in the TF in our data.
The rise in sales data also applied to many other European countries, with an overall increase of +5.8%, according to the ESVAC report [
14]. For 2021, sales data in Germany decreased by −14% [
45], while the official TF decreased (−33% for weaners and −28.7% for fattening pigs). This showed that the rise in 2020 was only temporary—possibly caused by an excessive purchase of VMPs in 2020 due to the COVID-19 pandemic and the Brexit or data anomaly, as assumed in the ESVAC report [
14]—and that sales and TF continued to decrease thereafter.
In addition to this overall reduction, the pattern of drug classes applied changed, resulting in changes in the weighted treatment frequency of some antimicrobial classes and substances by production type, indicating that the habits of drug administration changed. We discuss these changes below for the individual classes.
When examining the changes in the TFw% of an antimicrobial class, the total reduction in one antimicrobial class is the product of multiplying the TFw% by the total TF and then comparing the half years. For simplicity, we chose to describe only the TFw% in this manuscript.
3.3.1. Cephalosporins and Fluoroquinolones
Our results showed that during the course of our study, the roles of cephalosporins and fluoroquinolones in all production types remained around the same level.
The TF
w% remained at ≤0.5% for cephalosporins and ≤3.1% for fluoroquinolones in both weaners and fattening pigs. Slightly higher percentages for fluoroquinolones in fattening pigs were related to the treatment of respiratory and intestinal diseases with this antimicrobial class. From those findings, we concluded that, in our study, these two antimicrobial classes were only rarely administered as third-line antimicrobials, if no alternative was available in either type of production, in accordance with findings from other authors [
39,
46]. This is probably also due to the preferred administration route being oral in both production types—more suited for group treatment—and both antimicrobial classes are parenterally administered [
46,
47,
48].
In sows, the TF
w% for cephalosporins remained constant (≤4.3%) during the observation period, highlighting the role of this class for the treatment of mainly reproductive (postpartum dysgalactia syndrome), respiratory, and “other” diseases such as septicaemia and polyserositis. These antimicrobials are primarily administered parenterally to individual sick animals as, often, only a low number of sows are affected [
49,
50,
51]. The TF
w% of fluoroquinolones remained relatively high until 2019-1, before it decreased. The indications for their use are intestinal, urogenital, and respiratory diseases [
48,
50,
51]. The treatment frequencies of these diseases decreased in our study (see
Table S3), which could indicate that the occurrences of these diseases also decreased.
In piglets, cephalosporin usage fluctuated, but stayed mostly at <5%. They are preferred due to their long and potent effect and low dosages [
48,
52]. Their typical indications are respiratory and joint diseases caused by bacteria such as
Streptococcus suis, as well as “other” diseases such as after birth, castration, and teeth clipping, which is in accordance with findings reported by other authors [
32,
39,
53,
54].
The usage of fluoroquinolones in piglets also fluctuated, and they were mostly administered for intestinal diseases, which, according to the participating veterinarians, were mainly caused by enrofloxacin-susceptible
E. coli. This is in accordance with the findings of other authors [
32,
55].
Both cephalosporins and fluoroquinolones are administered parenterally to piglets—as most available products are only licenced for parenteral use—indicating individual treatments of the animals.
Compared with other substance classes, these TF
w% are still moderately low and only account for a small proportion of the overall AMU. According to the ESVAC report, overall sales of cephalosporins decreased by −32.8%: all participating countries documented low levels of cephalosporin sales, with Germany placing in the middle (−50%). Sales of fluoroquinolones reduced overall by −12.8%—with a larger variation throughout the participating countries—with Germany placing in the lower third [
14].
In our study, fluoroquinolone and cephalosporin usage reduced simultaneously with total AMU consumption, which was reflected by the constant TF
w%. This indicates that although the use of both reduced (in line with the official reports), the reliance on these antimicrobial classes remained. In contrast, if only considering the period from 2017-2 (before the new legislation) to 2020-2, we observed a notable decline in the use of both antimicrobial classes for piglets and sows, but this trend did not continue after 2018-2. This suggests that the new legislation (mandatory antimicrobial susceptibility testing prior to the use of third- and fourth-generation cephalosporins and fluoroquinolones since March 2018 [
56]) had only a time-limited effect on the use in both production types—where the usage of these antimicrobials played an important role—but was not sufficient to reduce the use of these antimicrobials in our study population in the long term. This indicates that further efforts are needed to continue this trend.
In comparison, other countries have a ban on cephalosporin and fluoroquinolone usage in pigs [
17,
57], at least raising the question if phasing out these classes—without risking animal health by over-limiting treatment options—is also possible in Germany. Denmark has a mandatory ban on the use of fluoroquinolones (zero usage) and a voluntary ban on the use of third- and fourth-generation cephalosporins (≤1%), while regulations in Norway reduced the limit on the administration of both classes to less than 0.01% [
14]. Both countries have not reported a rise in animal deaths due to a lack of available treatment options caused by these restrictions. This highlights the need to investigate how these countries treat the infections that are treated with these two classes in Germany, and to investigate if the usage of these antimicrobial classes can also be phased out in Germany.
3.3.2. Polymyxins
Our findings showed a reduction in the TF
w% for polymyxins in all four types of production: the higher TF
w% in sows in 2014 was related to the higher usage of colistin for the treatment of intestinal diseases. From the original data, whether this was due to the treatment of sows (probably preventive measures) and piglets together as a unit or to the incorrect assignment of ADF from piglets to sows by farmers is unclear. However, the TF
w% for colistin decreased drastically in 2015 and remained low. The rare use of colistin in sows is also supported by other researchers’ findings [
31,
46,
53]. The typical indications for treatment in sows are respiratory and urogenital diseases, lameness, and “others” (e.g., systemic infection and sepsis), for which no colistin use was reported in our study. Therefore, we concluded that colistin played a less prominent role in the treatment of sows, with the higher usage in 2014 likely connected to a misallocation of ADFs.
Weaners represent the group in our study to which veterinarians administered polymyxins most often. This was mostly related to the treatment or prevention of post-weaning diarrhoea caused by
E. coli, a widespread disease in weaning pigs [
32,
36,
50]. In addition, colistin is mostly administered orally, making it suitable for group treatment [
32,
58]. The TF
w% in our study dropped from 32.9% to 19.2%, in line with the decreasing trend in polymyxin sales from the official reports for 2020 compared with 2013 (−51.8%) [
44]. The reduction could have been caused by different means such as improving management and biosecurity [
53,
59,
60], vaccination against
E. coli [
61,
62,
63], changing to different treatment options such as zinc oxide ([
64,
65]), and the monitoring system [
25,
66].
Compared with weaners, colistin played a less important role for the piglets and fattening pigs in our study population. In piglets, infections caused by
E. coli (additional comments in our data were provided by the veterinarians) were also treated with fluoroquinolones, which was also described in the literature [
55]. In fattening pigs, intestinal diseases are often caused by different bacteria such as
Brachyspira or
Lawsonia intracellularis, which are treated with different antimicrobial substances [
40,
46,
51]. Nevertheless, in further investigations, researchers should closely monitor the indications and periods of polymyxins’ administration in these production types to analyse if an additional reduction in this antimicrobial substance is feasible.
According to the ESVAC, the overall sales of polymyxins for all food-producing animals in Europe decreased by almost −77%, while sales in Germany declined by −50% [
14], which was still higher than the requested maximum of 5.0 mg/population correction unit (PCU). Thus, further reduction strategies should be implemented. In the Netherlands, polymyxin sales for pigs in general (no division by production type available) decreased until 2017, followed by an increase, in contrast with the overall reduction we noted in our study. As a result of this increase and in accordance with the HPCIA classification, the Dutch regard polymyxins as third-choice antimicrobials and aim to phase out their usage from 2021 onwards [
18]. How this will affect sales and the use of the other antimicrobial classes remains to be seen. In accordance with our data, weaners were the production type most often treated with colistin in Switzerland [
46,
67], which was also the case in Denmark [
17] before the government prohibited the use of colistin by 2017.
Zinc oxide, which is the only non-antibiotic alternative for the treatment of gastrointestinal infections caused by resistant
E. coli in pigs otherwise treated with colistin, appears to be associated with co-selection for methicillin-resistant
Staphylococcus aureus and environmental contamination [
64,
68,
69]. As a result, the European Commission decided on a zinc oxide ban in the EU starting in 2022 [
70], which will probably cause a rise in colistin consumption in European countries, where zinc oxide is administered more regularly than in Germany (e.g., Denmark: almost 500 tonnes in 2020 [
17]). How countries—especially those where the use of colistin is also banned—react to this new legislation will need to be observed closely.
3.3.3. Macrolides
In contrast with polymyxins, we observed no clear trend in macrolide usage. Regarding the findings in our study, macrolides played an important role in treating piglets—where the TF
w% for macrolides fluctuated between the half years up to 35.5%—and fattening pigs, whereas their role in sows (except 2013-1) and weaners was much less prominent. Macrolides were most often used for the treatment of respiratory and intestinal diseases, in accordance with results from other studies [
50,
51].
In piglets, the TF
w% for macrolides fluctuated, with an increasing trend, highlighting the role of these antimicrobials for this production type. This was especially true for the treatment of respiratory diseases—the most common disease complex in piglets in our study (as well as in other studies)—followed by intestinal and joint diseases [
19,
31,
50,
54]. Callens et al. described that tulathromycin—which was also the most frequently administered macrolide in our study—was often used in combination with iron mineral preparations at an early age to prevent coughing and sneezing as well as iron deficiency [
54]. The fluctuations in the TF
w% resulted from shifting frequencies of administrations, pattern shifts to other antimicrobials (mostly penicillins), a rise in holdings without AMU, and the overall drop in AMU.
For fattening pigs, the TF
w% for macrolides remained relative constant (≤23.6%), even though the total TF decreased. These results suggested that the relevance of this antimicrobial class stayed nearly the same over the study period, even though a total reduction occurred. The indications for usage are respiratory—such as enzootic pneumonia caused by bacteria such as
Actinobacillus pleuropneumoniae,
Pasteurella multocida,
Mycoplasma hyopneumoniae,
Glaesserella parasuis, and
Bordetella bronchiseptica—and intestinal diseases such as swine dysentery and porcine proliferative enteropathy [
36,
40,
51,
54]. Existing fluctuations were mostly related to AMU pattern shifts: mainly penicillins, tetracyclines, and pleuromutilins.
For further reduction of macrolides in pigs, biosecurity and management strategies must be increased and optimised, and their indication-usage relationship must be monitored more closely, especially in piglets and fattening pigs.
According to the ESVAC report, sales of macrolides increased in Germany in 2020 (in alignment with increased overall sales, as mentioned above), but compared with 2011, the sales still decreased. In comparison with other countries, Germany ranked somewhere in the middle, hinting that a further reduction in the use of this antimicrobial class is possible [
14]. In Denmark, macrolides represent the only highest priority critically important antimicrobials still used for treating pigs. Their usage was highest in weaners, with a steady increase—especially since 2017; they were probably used for the treatment of diseases previously treated with colistin—representing the second-most administered class of antimicrobials in this production type. In fattening pigs, sows, and piglets, the level of macrolide consumption varied but, with an increasing trend since 2017, ranked in third and second places in the antimicrobial classes most administered. This could be a reaction to the ban on all other critically important antimicrobials in Denmark, highlighting the importance of this class in lieu of alternatives [
17]. In contrast, macrolides were most frequently used in our study in fattening pigs (respiratory and intestinal diseases) and piglets (respiratory diseases) and played only a secondary role in weaners and sows. In the Netherlands, macrolides and lincosamides form a combined number, even further complicating direct comparison. For pigs in general, the sales of macrolides and lincosamides remained nearly the same, in contrast with the decreasing trend noted in our study [
18].
3.3.4. Other Antimicrobial Classes
In addition to the antimicrobial classes addressed above, classical antimicrobials—such as penicillins, tetracyclines, and aminoglycosides—played an important role in the treatment of pigs in Germany. Penicillins were the most frequently administered class in all types of production (15–60%) and were used to treat diseases from all indication groups. Tetracyclines were the second-most administered class in sows (15–40%)—for respiratory and “other” diseases—and fattening pigs (~30%)—mostly for respiratory diseases (in some years, also for skin diseases and the central nervous system)—and were the third-most administered class in weaners (~20%)—mainly for respiratory diseases. Aminoglycosides only played a role in the treatment of piglets (third administered class, 10–20%), where this class was used for the treatment of intestinal, joint, and “other” diseases. Sulfonamides and trimethoprim were the third-most commonly administered classes in sows (8–20%) and were used to treat urogenital, respiratory, intestinal, and “other” diseases.
3.4. Use of Classification Systems
All antimicrobial classes discussed above are covered by the various classification systems proposed by different organisations. Notably, the existing lists have different intentions for use and therefore must be treated differently. As the WHO list focuses on human health and the WOAH list on animal health, the EMA list may be quoted as an attempt to balance both views.
To categorise the different antimicrobial classes, the WHO defined two criteria: The first states that an “antimicrobial class is the sole or one of limited available therapies to treat serious bacterial infections in humans”. The second expresses that the used antimicrobial class treats infections in people caused by bacteria that may acquire resistance genes or transmit from non-human sources. In accordance, the WHO considers the global AMU and regards substances as important for humans if they have indications in human medicine anywhere in the world, regardless if the cause for these diseases is bacteria common to animals or humans [
71]. Thus, this list does not consider the importance of antimicrobial substances for veterinary medicine. Although such an approach facilitates the trade and general comparison of AMU, it does not consider the specific requirements of individual countries, as it is a global approach that does not distinguish whether a particular disease requiring a particular antimicrobial substance actually occurs in a particular country or region. Antimicrobials classified as HPCIAs, which veterinarians dispense, include the third- and fourth-generation cephalosporins, quinolones, macrolides, and polymyxins. From a One Health approach, this classification must be considered for creating a list for veterinary medicine, but for the same reason, a solely human-based approach is insufficient.
The WOAH list [
29] (last updated in 2019) addresses antimicrobial substances authorised for food-producing animals, does not include substances solely used in human medicine, does not include growth-promoters, and focuses mostly on antibacterial substances. Furthermore, the document advises against the prophylactic usage of antimicrobials classified as HPCIAs by the WHO; against usage of HPCIAs if other, less critical antimicrobials are available instead; and on necessary administration only after bacteriological testing for resistance.
For our data, an analysis of the AMU for the different antimicrobial substances classified by the WOAH with regard to their varying significance remains futile. Of the 36 substances used, only three—colistin, lincosamin, and tiamulin—were not VCIAs, resulting in very high TF
w% values for the VCIAs in all four types of production, especially with low colistin usage. This list, in its current form, is consequently not aligned with the One Health concept, because it focuses on the general need for veterinary application only. Therefore, following the global conference on AMR in 2018, the WOAH decided to create additional antimicrobial lists of veterinary importance by species [
72]. Such a list, e.g., for pigs, would represent more accurate guideline on which antimicrobials are of critical importance for this animal species and would thus be a more appropriate tool for comparing AMU and its relevance regarding human and animal health.
Remarkably, colistin is only listed as highly, and not critically, important for animals in general [
29], and many countries around the world use only small amounts of colistin to treat animals or have prohibited its use. This is in contrast with Germany, where it is regularly administered in veterinary medicine and where various authors have described a lack of alternatives for certain infectious diseases in animals [
14,
64,
73]. Until recently, only veterinarians used colistin due to its toxicity in humans, making it a more appropriate choice for usage in veterinary medicine than cephalosporins and fluoroquinolones. Today, however, it counts as a last-resort drug in human medicine for the treatment of “sepsis and pneumonia caused by extensive drug-resistant Gram-negative bacteria” [
51,
74], making its regular usage in animals controversial.
EMA’s Category B (Restrict) of the “Categorisation of antibiotics […]” includes the third- and fourth-generation cephalosporins, quinolones, and polymyxins for veterinary use. Compared with the other two categorisations, macrolides are placed only in the third Category C (Caution). The reasons for this decision are discussed in the reflection paper [
30,
75]: the definition of substances assigned to Category C states that “there are in general alternatives in human medicine in the EU but there are few alternatives in veterinary medicine for certain indications”. These indications are, for example, the treatment of
Lawsonia intracellularis and
Mycoplasma spp. and the “treatment of respiratory tract infections caused by bacteria that are resistant to alternatives in Category D” [
76]. Whereas the EMA acknowledges that the usage of macrolides in animals may lead to increasing resistance to macrolides in
Campylobacter,
Salmonella, and other pathogens in humans, it cites studies on risk assessment suggesting that the usage of macrolides in animals poses a lower public health risk [
77,
78] than AMU in humans [
4,
79]. Furthermore, campylobacteriosis in humans does not usually require treatment, as it is mostly self-limiting and severe courses of infection often associate with co-existing diseases or geriatric patients [
80]. However, other reports have documented high resistance levels to tylosin in bacteria from pigs, including zoonotic pathogens in several European countries [
81,
82,
83]. Given the threat of resistance and the importance of macrolides for the treatment of some indications in children, in whom the administration of fluoroquinolones is not possible, the EMA reclassified this substance class from the previous “no restrictions on use” (Category D) to “caution” (Category C). In addition to these risk factors, this decision also considered that, depending on the disease, alternatives are available for prevention, metaphylaxis, and treatment—such as pleuromutilins, tetracyclines, lincosamides, and penicillins [
51]—but placing macrolides in Category B would severely limit the availability of alternatives for those diseases.
With the created list, the EMA considers both human and animal health, complying with a One Health approach to combat AMR. Different reflection papers describe thorough scientific evaluations on critical antimicrobials, especially polymyxins and macrolides [
74,
84]. In addition to the mentioned update of macrolides, polymyxins were upgraded from Category C to B, because risk factors for public health through resistance development increased or new data became available. According to the EMA, this list can assist in creating guidelines at the national level while considering regional requirements.
After applying the three different lists of antimicrobial categorisations to our data, with the goal of analysing the consequences for treatment guidelines for veterinarians, the one created by the EMA—as a One Health approach—seems to be most appropriate, but still needs to be adjusted for national use.
Macrolides, defined as second-line antimicrobials by EMA, are widely used in veterinary medicine and play a major role in the treatment of animals (as shown in the literature and our data alike). Placing this class into a more restricted category (as per the WHO and WOAH) would put its use in a bad light and might lead to the use of other critical antimicrobials or might endanger animal health if less-effective antimicrobials are used instead.
National adaptations of the EMA list, to establish treatment guidelines for Germany—supporting veterinarians in forming their treatment decision—should include a subdivision by animal species and, even further, by production type. They should also consider the differences in the nature and incidence of infectious diseases and, therefore, the differences in the needed substances [
40,
51,
53,
54,
58], which are also reflected by the different usage patterns in our study. Thus, our findings could assist to define first-, second-, and third-line antimicrobials for such (production-type-based) treatment guidelines in Germany.
According to the new regulation (EU) 2019/6, which came into force starting 28 January 2022 [
13], criteria have to be determined to identify antimicrobial substances reserved for human use only, considering scientific-based recommendations from the EMA and other European agencies [
85]. These criteria were fixed by Delegated Regulation (EU) 2021/1760 [
86]. As a next step, on 16 February 2022, the EMA published a list of antimicrobials recommended to be reserved for human use only [
87] based on evaluations in accordance with the previously fixed groups of criteria: “importance for human health, resistance transmission risk from animals to humans and non-essential need in veterinary medicine”. This list includes antimicrobials such as glycopeptides and penems, but does not include any substances licensed for use in veterinary medicine in the European Union, meaning all currently available treatment options are recommended to remain available. On 19 July 2022, the European Commission implemented Regulation (EU) 2022/1255, designating antimicrobials in accordance with Regulation (EU) 2019/6 (from 9 February 2023 onwards), considering the EMA’s advice [
88]. The list of designated restricted antimicrobials will be reviewed continually and adapted accordingly to the requirements. In addition, the German government decides on an amendment of the Veterinary Medicinal Products Act, including a higher impact on the total TF if third- and fourth-generation cephalosporins, fluoroquinolones, or colistin are administered [
89]. The coming years will show how the European and national regulations will affect the treatment of sick animals and AMU in general, as well as of critical antimicrobials.