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Antibiotics

Antibiotics is an international, peer-reviewed, open access journal on all aspects of antibiotics, published monthly online by MDPI. The Croatian Pharmacological Society (CPS) and Northern Greece Society of Medical Biopathology (EIBBE) are affiliated with Antibiotics, and their members receive discounts on the article processing charges.
  • Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
  • High Visibility: indexed within Scopus, SCIE (Web of Science), PubMed, PMC, Embase, CAPlus / SciFinder, and other databases.
  • Journal Rank: JCR - Q1 (Infectious Diseases) / CiteScore - Q1 (General Pharmacology, Toxicology and Pharmaceutics )
  • Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 16.4 days after submission; acceptance to publication is undertaken in 2.9 days (median values for papers published in this journal in the first half of 2026).
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All Articles (10,129)

Background/Objectives: Antimicrobial resistance (AMR) poses a global threat, exacerbated by the overuse and misuse of antimicrobials. This study evaluated antimicrobial use and prescribing patterns among inpatients in three tertiary hospitals in Nepal. Methods: A cross-sectional point prevalence survey of the inpatient module of the standardized Global-PPS methodology was conducted across three tertiary hospitals in Nepal during the 2022 Global-PPS Period 2 (P2) survey, carried out between May and August 2022. Data were collected via a paper-based form (University of Antwerp;) and analyzed descriptively. Antimicrobial use was defined as the proportion of inpatients receiving at least one systemic antimicrobial on the day of the survey. Results: Of 379 patients eligible for the study, 233 (61.5%) received at least one antimicrobial, with the highest prevalence observed in adult and neonatal intensive care units (ICUs). Out of 371 antibiotic prescriptions, third-generation cephalosporins (30.2%) and carbapenems (8.1%) were the most frequently prescribed, and 61.0% of overall antibiotics belonged to the Watch group of WHO AWaRe classification. Surgical prophylaxis often exceeded recommended durations, with 91.5% of prophylactic antibiotics prescribed for more than one day. Empirical therapy dominated 56.33% of all prescriptions, with targeted therapy limited to 4.04%. Conclusions: The high overall prevalence of antimicrobial use, the reliance on empirical therapy, and over-reliance on Watch-group antibiotics and Unclassified AWaRe antibiotics highlights the urgent need for robust antimicrobial stewardship programs in Nepal.

Antibiotics

20 September 2026

Top prescribed antimicrobial classes by ward and prescribing category, Nepal hospital, Global-PPS 2022–P2. Each cell shows the number of prescriptions (N) and, in parentheses, the percentage that the antimicrobial class represents of all systemic antibacterial (ATC J01) prescriptions within that column’s category. Cell shading is scaled to percentage (darker = higher proportion); a dash indicates the class was not prescribed in that category. Abbreviations: AMW = adult medical ward (N = 94); ASW = adult surgical ward (N = 125); AICU = adult intensive care unit (N = 72); PMW = pediatric medical ward (N = 31); NICU = neonatal intensive care unit (N = 49); CAIs = community-acquired infections (N = 190); HAIs = hospital-acquired infections (N = 29); SAP = surgical antimicrobial prophylaxis (N = 89); MAP = medical antimicrobial prophylaxis (N = 59); overall (N = 371); BLI = beta-lactamase inhibitors; ATC = Anatomical Therapeutic Chemical classification system.
  • Systematic Review
  • Open Access

Background/Objectives: Carbapenems remain the standard treatment for infections caused by extended-spectrum β-lactamase–producing Enterobacterales (ESBL-E), but their widespread use contributes to the emergence of carbapenem resistance. Cephamycins have been proposed as carbapenem-sparing alternatives because of their relative stability against ESBL-mediated hydrolysis; however, their clinical effectiveness remains uncertain. We aimed to compare the effectiveness of cephamycins versus carbapenems as definitive treatment for ESBL-E infections. Methods: We searched Scopus, PubMed, and Embase for studies comparing cephamycins with carbapenems for the treatment of ESBL-producing Enterobacterales infections, with the search conducted through January 2026. Observational studies and randomized trials comparing cephamycins (cefmetazole, flomoxef, cefoxitin) with carbapenems in adult patients with microbiologically confirmed ESBL-E infections were included. The primary outcome was all-cause mortality; secondary outcomes were clinical and microbiological cure. Risk of bias was assessed using ROBINS-I, and data were pooled using random-effects models. Results: Ten retrospective cohort studies (n = 653 for mortality) were included. Cephamycins were associated with a non-significant trend toward lower mortality compared with carbapenems (OR 0.48, 95% CI 0.22–1.03). Subgroup analyses suggested a potential benefit in Escherichia coli and urinary-source infections, whereas no advantage was observed in Klebsiella pneumoniae or non-urinary bloodstream infections. No significant differences were found for clinical or microbiological cure. The certainty of evidence was rated as very low. Conclusions: Cephamycins may represent a carbapenem-sparing option in carefully selected patients with low-risk ESBL-E infections, particularly urinary-source infections caused by E. coli. However, the current evidence is limited to retrospective observational studies with very low certainty and should be considered hypothesis-generating rather than practice-changing. Adequately powered randomized controlled trials are needed to confirm these findings.

Antibiotics

20 September 2026

PRISMA 2020 flowchart representing the study selection process.

Objectives: The fourth-generation fluoroquinolone delafloxacin (DFX) is propagated as a novel (oral) treatment option for infections with multidrug-resistant Gram-negatives. To date, efficacy data for Enterobacterales is only available for wild-type isolates but not for those with pre-existing resistance against third-generation fluoroquinolones. Methods: One hundred twenty-nine non-duplicate clinical isolates of Enterobacterales that demonstrated ciprofloxacin resistance in VITEK 2 testing were collected and analyzed for CIP and DFX minimum inhibitory concentrations (MICs) via broth microdilution. Results: DFX MICs ranged from 0.5 to ≥ 16 mg L−1 (median: 4 mg L−1). All Escherichia coli isolates (n = 56; 43% of all isolates), the only species with EUCAST breakpoints, were classified as DFX resistant. All other isolates belonging to species for which EUCAST epidemiological cut-offs (ECOFFs) are available (n = 64; 50% of all isolates) demonstrated MICs above the ECOFF. With a minimum and median MIC of 2 and 8 mg L−1, respectively, the remaining isolates (6%) achieved similar results. A moderate correlation between the MIC values of the two fluoroquinolones was found. For the majority of isolates (64%), other oral options for antibiotic therapy, such as amoxicillin/clavulanic acid and trimethoprim/sulfamethoxazole, were still available. Conclusions: Our data suggests that, compared to CIP, DFX does not demonstrate increased in vitro efficacy against fluoroquinolone-resistant Enterobacterales. Subsequent DFX testing seems to be of limited additional value.

Antibiotics

20 September 2026

Heat map depicting the distribution of ciprofloxacin and delafloxacin MICs per isolate.

Background/Objectives: Proteus mirabilis is an opportunistic pathogen and a potential reservoir of clinically important antimicrobial resistance genes in animal production. However, mink-derived P. mirabilis remains poorly characterized. This study investigated multidrug-resistant and extended-spectrum β-lactamase (ESBL)-producing isolates from intensive mink farms, focusing on clinically important β-lactamase genes, their genomic backgrounds, and mobile genetic elements (MGEs). Methods:  Among 373 fecal and intestinal-content samples collected from six mink farms in Shandong Province, China, 68 P. mirabilis isolates were recovered. All underwent antimicrobial susceptibility testing, ESBL confirmation, and virulence-associated phenotypic assays. The 39 ESBL-positive isolates underwent whole-genome sequencing, followed by analyses of antimicrobial resistance genes, the pangenome, and MGEs and comparison with 198 publicly available genomes. Results:  Of the 373 sampled mink, 68 (18.2%) were P. mirabilis positive, and 39 (10.5%) carried ESBL-producing isolates. Of the 68 isolates, 63 (92.6%) were multidrug resistant, and 39 (57.4%) were ESBL positive. All exhibited strong biofilm formation and urease activity, while 83.8% showed strong swarming motility. Among the sequenced isolates, blaCTX-M genes were identified in 32 isolates and blaNDM-1 in three. Both blaCTX-M-65- and blaNDM-1-positive isolates were distributed across multiple genomic lineages, with blaCTX-M-65 additionally detected in multiple sequence types. This distribution indicates that these genes were not restricted to a single clone but does not demonstrate horizontal gene transfer. MGE-associated features showed same-contig co-occurrence with several resistance genes, notably IS903blaCTX-M-65 and ISAba125blaNDM-1. The sequenced isolates also exhibited substantial accessory-genome diversity and widely distributed virulence determinants associated with adhesion, motility, iron acquisition, and toxin-related functions. Conclusions:  Mink-derived P. mirabilis exhibited extensive multidrug resistance and carried clinically important β-lactamase genes across diverse genomic backgrounds. These findings support the inclusion of fur-animal production systems in One Health surveillance of antimicrobial-resistant P. mirabilis.

Antibiotics

20 September 2026

Isolation rates of Proteus mirabilis from mink farms in Shandong Province, China.

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Antibiotics - ISSN 2079-6382