Methods for Mathematical Analysis of Simulated and Real Fractal Processes with Application in Cardiology
Abstract
:1. Introduction
- Self-similarity—the fractal order is self-similarity if it can decompose into smaller parts, each of which is similar to the main one. The degree of self-similarity can be determined by the Hurst exponent.
- Fractal dimension (D)—this is a non-integer value located between the Euclidean and the topological dimensions [12].
1.1. Related Work
1.2. Purpose and Objective of the Article
- Simulate an exact FGN-based self-similar (fractal) process by applying Hosking’s algorithm.
- Comparative analysis of the following 5 methods: Rescaled Range analysis (R/S), Variance-time plot, Wavelet-based method, DFA, MFDFA to determine the value of the Hurst exponent with respect to the accuracy parameter.
- Study of cardiac signals of two groups of patients by applying the most accurate methods of analysis.
2. Materials and Methods
2.1. Hosking’s Algorithm for Simulation Modeling of Fractal Processes
- rk are autocorrelation coefficients;
- σ is the variance;
- H is the Hurst exponent.
- and are the variances of the first two elements of the generated process;
- is the correlation coefficient for the first element X1 of the fractal process;
- r0 and r1 are the autocorrelation coefficients of the first two elements of the generated process.
2.2. Methods for Determining the Hurst Exponent
2.2.1. Variance-Time Plot
- is the slope of the regression line;
- is the determined value of the Hurst exponent.
2.2.2. Rescaled Range Statistics
- The Range R(n), which defines the differences between the min and max value of the sum of the deviation Wj from the mean value of the data for an area of n points, is given by the expression:
- Standard deviation S(n):
- is the point where the regression line intersects the ordinate;
- is the slope of the regression line.
2.2.3. Wavelet-Based Method
- The Fourier transform is used to transform stationary processes from the frequency domain to the time domain, and the process is transformed as a sum of sinusoids with different frequencies. It cannot represent the information in the time domain.
- The wavelet transform can represent the process in the time and frequency domains simultaneously. It can transform both stationary and non-stationary processes without loss of information.
- A wavelet function (ψi,j) applied to the high-pass filter that is run two or more times and computes wavelet coefficients;
- A scalable function (φi,j) relating the low-pass filter that creates a smoother version of the original data. The received data after the low-pass filter become input data for the next step of the algorithm.
- is a scalable function;
- is the mother wavelet and originates from
2.2.4. Detrended Fluctuation Analysis
- Instead of using a decreasing correlation function, an increasing function is introduced, which provides a more reliable estimation of processes with long-term correlations, especially in the presence of noise and sample size limitations;
- An integral part of the calculation algorithm is the approximation and subsequent elimination of the low-frequency trend, which makes it possible to apply the method to both stationary and non-stationary processes without their prior filtering.
2.2.5. Multifractal Detrended Fluctuation Analysis
2.3. Data
3. Results and Discussion
3.1. Analysis of Simulated Data
3.1.1. Determining the Minimum Length of a Simulated Fractal Process
- Variance-time plot and R/S are not very accurate methods, as their RSE are in a wide range from 0.2% to 11.3%, and these methods can only be used to test whether the studied process is fractal or not, and if it is fractal, approximately to be determined the value of the Hurst exponent;
- The determined values of the Hurst exponent with the methods: Wavelet-based, DFA and MFDFA reach the input values of this parameter with a RSE of less than 1% for process lengths greater than 214 (16,384) points. These three methods have a high degree of accuracy and can be used in the analysis of simulated and real processes;
3.1.2. Evaluation of the Wavelet-Based Methods
- The RSE in determining the Hurst exponent using the Haar and Daubechies algorithms is the smallest when the scale is (i,j) = (2,10) and (i,j) = (3,10). In the article, when applying this method, the scale (i,j) = (2,10) is used;
- The RSE in determining the Hurst exponent is smaller when using the Daubechies algorithm compared to the Haar algorithm;
- The RSE of the Hurst exponent is the smallest when using the Daubechies algorithm with 10 coefficients and it is less than 0.5%.
3.1.3. Evaluation of the DFA Method
3.1.4. Evaluation of the MFDFA Method
3.2. Analysis of Real Cardiological Data
4. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Length (Points) | H = 0.6 | H = 0.7 | H = 0.8 | H = 0.9 | ||||
---|---|---|---|---|---|---|---|---|
Mean ± sd | RSE (%) | Mean ± sd | RSE (%) | Mean ± sd | RSE (%) | Mean ± sd | RSE (%) | |
Variance-Time Plot | ||||||||
212 | 0.611 ± 0.07 | 2.56 | 0.703 ± 0.04 | 1.27 | 0.783 ± 0.08 | 2.28 | 0.848 ± 0.21 | 5.54 |
213 | 0.541 ± 0.09 | 3.72 | 0.639 ± 0.17 | 5.95 | 0.736 ± 0.21 | 6.38 | 0.834 ± 0.33 | 8.85 |
214 | 0.534 ± 0.13 | 5.44 | 0.626 ± 0.21 | 7.50 | 0.713 ± 0.32 | 10.03 | 0.798 ± 0.41 | 11.49 |
215 | 0.604 ± 0.06 | 2.22 | 0.691 ± 0.10 | 3.24 | 0.771 ± 0.11 | 3.19 | 0.835 ± 0.28 | 7.07 |
216 | 0.578 ± 0.08 | 3.09 | 0.664 ± 0.19 | 6.40 | 0.744 ± 0.22 | 6.61 | 0.835 ± 0.35 | 9.37 |
217 | 0.582 ± 0.07 | 2.69 | 0.671 ± 0.18 | 6.00 | 0.761 ± 0.15 | 4.41 | 0.840 ± 0.27 | 7.19 |
Rescaled range (R/S) method | ||||||||
212 | 0.645 ± 0.21 | 7.28 | 0.730 ± 0.12 | 3.68 | 0.809 ± 0.04 | 1.11 | 0.873 ± 0.11 | 2.82 |
213 | 0.609 ± 0.08 | 2.94 | 0.694 ± 0.03 | 0.97 | 0.775 ± 0.11 | 3.20 | 0.841 ± 0.19 | 5.05 |
214 | 0.607 ± 0.05 | 1.84 | 0.690 ± 0.05 | 1.62 | 0.768 ± 0.13 | 3.78 | 0.851 ± 0.20 | 5.26 |
215 | 0.620 ± 0.09 | 3.25 | 0.681 ± 0.08 | 2.63 | 0.780 ± 0.10 | 2.87 | 0.851 ± 0.21 | 5.52 |
216 | 0.596 ± 0.04 | 1.50 | 0.687 ± 0.06 | 1.95 | 0.763 ± 0.16 | 4.69 | 0.853 ± 0.19 | 4.98 |
217 | 0.601 ± 0.02 | 0.74 | 0.703 ± 0.01 | 0.32 | 0.771 ± 0.14 | 4.06 | 0.856 ± 0.17 | 4.44 |
Wavelet-based method (Daubechies algorithm with 10 coefficients) | ||||||||
212 | 0.579 ± 0.10 | 3.86 | 0.678 ± 0.11 | 3.63 | 0.790 ± 0.05 | 1.42 | 0.930 ± 0.09 | 2.16 |
213 | 0.585 ± 0.06 | 2.29 | 0.687 ± 0.06 | 1.95 | 0.788 ± 0.04 | 1.14 | 0.890 ± 0.07 | 1.76 |
214 | 0.583 ± 0.07 | 2.68 | 0.686 ± 0.08 | 2.61 | 0.787 ± 0.03 | 0.85 | 0.888 ± 0.06 | 1.51 |
215 | 0.606 ± 0.02 | 0.74 | 0.705 ± 0.03 | 0.95 | 0.804 ± 0.03 | 0.83 | 0.904 ± 0.04 | 0.99 |
216 | 0.601 ± 0.01 | 0.37 | 0.702 ± 0.02 | 0.64 | 0.803 ± 0.02 | 0.56 | 0.903 ± 0.03 | 0.74 |
217 | 0.599 ± 0.01 | 0.37 | 0.700 ± 0.01 | 0.32 | 0.801 ± 0.01 | 0.28 | 0.901 ± 0.01 | 0.25 |
Detrended Fluctuation Analysis method | ||||||||
212 | 0.615 ± 0.09 | 3.27 | 0.715 ± 0.10 | 3.13 | 0.814 ± 0.12 | 3.39 | 0.914 ± 0.20 | 4.89 |
213 | 0.614 ± 0.06 | 2.18 | 0.711 ± 0.08 | 2.52 | 0.810 ± 0.10 | 2.76 | 0.910 ± 0.18 | 4.42 |
214 | 0.611 ± 0.05 | 1.83 | 0.710 ± 0.10 | 3.15 | 0.790 ± 0.07 | 1.98 | 0.910 ± 0.09 | 2.21 |
215 | 0.606 ± 0.02 | 0.74 | 0.707 ± 0.02 | 0.63 | 0.808 ± 0.03 | 0.83 | 0.906 ± 0.04 | 0.99 |
216 | 0.605 ± 0.02 | 0.74 | 0.707 ± 0.03 | 0.95 | 0.803 ± 0.03 | 0.84 | 0.904 ± 0.03 | 0.74 |
217 | 0.602 ± 0.01 | 0.37 | 0.707 ± 0.02 | 0.63 | 0.801 ± 0.02 | 0.56 | 0.898 ± 0.02 | 0.50 |
Multifractal Detrended Fluctuation Analysis method | ||||||||
212 | 0.628 ± 0.19 | 6.77 | 0.744 ± 0.17 | 5.11 | 0.825 ± 0.15 | 3.12 | 0.850 ± 0.18 | 4.74 |
213 | 0.627 ± 0.19 | 6.78 | 0.726 ± 0.11 | 3.39 | 0.822 ± 0.10 | 2.79 | 0.876 ± 0.06 | 1.53 |
214 | 0.594 ± 0.09 | 3.39 | 0.714 ± 0.08 | 2.50 | 0.812 ± 0.09 | 1.51 | 0.889 ± 0.06 | 1.51 |
215 | 0.599 ± 0.02 | 0.75 | 0.708 ± 0.03 | 0.95 | 0.792 ± 0.03 | 0.85 | 0.897 ± 0.03 | 0.75 |
216 | 0.601 ± 0.01 | 0.37 | 0.704 ± 0.02 | 0.64 | 0.807 ± 0.02 | 0.55 | 0.908 ± 0.03 | 0.74 |
217 | 0.600 ± 0.01 | 0.37 | 0.703 ± 0.01 | 0.32 | 0.805 ± 0.02 | 0.56 | 0.905 ± 0.01 | 0.25 |
Scale (i,j) | H = 0.6 | H = 0.7 | H = 0.8 | H = 0.9 | ||||
---|---|---|---|---|---|---|---|---|
Mean ± sd | RSE (%) | Mean ± sd | RSE (%) | Mean ± sd | RSE (%) | Mean ± sd | RSE (%) | |
Haar algorithm | ||||||||
(1,10) | 0.596 ± 0.06 | 2.25 | 0.698 ± 0.06 | 1.92 | 0.801 ± 0.07 | 1.95 | 0.904 ± 0.08 | 1.98 |
(2,10) | 0.596 ± 0.04 | 1.50 | 0.699 ± 0.04 | 1.27 | 0.803 ± 0.04 | 1.11 | 0.906 ± 0.06 | 1.48 |
(3,10) | 0.598 ± 0.05 | 1.87 | 0.702 ± 0.05 | 1.59 | 0.806 ± 0.05 | 1.39 | 0.911 ± 0.05 | 1.23 |
(4,10) | 0.599 ± 0.06 | 2.24 | 0.705 ± 0.07 | 2.22 | 0.811 ± 0.06 | 1.65 | 0.917 ± 0.07 | 1.71 |
(5,10) | 0.607 ± 0.07 | 2.57 | 0.714 ± 0.06 | 1.88 | 0.821 ± 0.07 | 1.91 | 0.927 ± 0.09 | 2.17 |
(6,10) | 0.597 ± 0.06 | 2.25 | 0.711 ± 0.06 | 1.89 | 0.824 ± 0.08 | 2.17 | 0.936 ± 0.10 | 2.39 |
Daubechies algorithm with 4 coefficients | ||||||||
(1,10) | 0.599 ± 0.06 | 2.24 | 0.702 ± 0.07 | 2.23 | 0.804 ± 0.08 | 2.22 | 0.906 ± 0.09 | 2.22 |
(2,10) | 0.599 ± 0.03 | 1.12 | 0.702 ± 0.04 | 1.27 | 0.804 ± 0.06 | 1.67 | 0.905 ± 0.06 | 1.48 |
(3,10) | 0.600 ± 0.05 | 1.86 | 0.702 ± 0.03 | 0.96 | 0.804 ± 0.07 | 1.95 | 0.905 ± 0.08 | 1.98 |
(4,10) | 0.603 ± 0.06 | 2.22 | 0.704 ± 0.05 | 1.59 | 0.806 ± 0.08 | 2.22 | 0.908 ± 0.10 | 2.46 |
(5,10) | 0.611 ± 0.07 | 2.56 | 0.713 ± 0.07 | 2.20 | 0.816 ± 0.09 | 2.47 | 0.917 ± 0.11 | 2.68 |
(6,10) | 0.601 ± 0.06 | 2.23 | 0.703 ± 0.08 | 2.54 | 0.805 ± 0.10 | 2.78 | 0.909 ± 0.09 | 2.21 |
Daubechies algorithm with 8 coefficients | ||||||||
(1,10) | 0.610 ± 0.05 | 1.83 | 0.713 ± 0.07 | 2.20 | 0.815 ± 0.09 | 2.47 | 0.916 ± 0.10 | 2.44 |
(2,10) | 0.612 ± 0.04 | 1.46 | 0.714 ± 0.06 | 1.87 | 0.815 ± 0.07 | 1.92 | 0.915 ± 0.08 | 1.96 |
(3,10) | 0.615 ± 0.06 | 2.18 | 0.717 ± 0.07 | 2.18 | 0.817 ± 0.8 | 2.19 | 0.916 ± 0.09 | 2.20 |
(4,10) | 0.625 ± 0.12 | 4.29 | 0.727 ± 0.10 | 3.08 | 0.827 ± 0.12 | 3.24 | 0.926 ± 0.14 | 3.38 |
(5,10) | 0.638 ± 0.19 | 6.66 | 0.739 ± 0.18 | 5.45 | 0.839 ± 0.17 | 4.53 | 0.936 ± 0.19 | 4.54 |
(6,10) | 0.661 ± 0.25 | 8.46 | 0.763 ± 0.26 | 7.62 | 0.862 ± 0.27 | 7.00 | 0.957 ± 0.23 | 5.37 |
Daubechies algorithm with 10 coefficients | ||||||||
(1,10) | 0.600 ± 0.03 | 1.12 | 0.704 ± 0.03 | 0.95 | 0.804 ± 0.04 | 1.11 | 0.908 ± 0.04 | 0.98 |
(2,10) | 0.600 ± 0.01 | 0.37 | 0.701 ± 0.01 | 0.32 | 0.804 ± 0.01 | 0.28 | 0.904 ± 0.01 | 0.25 |
(3,10) | 0.601 ± 0.02 | 0.74 | 0.702 ± 0.02 | 0.64 | 0.803 ± 0.02 | 0.56 | 0.904 ± 0.02 | 0.49 |
(4,10) | 0.605 ± 0.04 | 1.48 | 0.705 ± 0.04 | 1.27 | 0.806 ± 0.04 | 1.11 | 0.907 ± 0.05 | 1.23 |
(5,10) | 0.614 ± 0.06 | 2.19 | 0.715 ± 0.07 | 2.19 | 0.816 ± 0.08 | 2.19 | 0.917 ± 0.07 | 1.22 |
(6,10) | 0.612 ± 0.05 | 1.83 | 0.711 ± 0.05 | 1.57 | 0.813 ± 0.07 | 1.92 | 0.916 ± 0.06 | 1.46 |
Daubechies algorithm with 12 coefficients | ||||||||
(1,10) | 0.601 ± 0.02 | 0.74 | 0.705 ± 0.03 | 0.95 | 0.808 ± 0.04 | 1.11 | 0.911 ± 0.05 | 1.23 |
(2,10) | 0.600 ± -0.01 | 0.37 | 0.704 ± 0.01 | 0.32 | 0.807 ± 0.03 | 0.83 | 0.908 ± 0.04 | 0.98 |
(3,10) | 0.601 ± 0.01 | 0.37 | 0.704 ± 0.01 | 0.32 | 0.807 + 0.03 | 0.83 | 0.908 ± 0.04 | 0.98 |
(4,10) | 0.696 ± 0.03 | 0.96 | 0.710 ± 0.05 | 1.57 | 0.813 ± 0.06 | 1.65 | 0.916 ± 0.07 | 1.71 |
(5,10) | 0.618 ± 0.07 | 2.53 | 0.722 ± 0.09 | 2.79 | 0.826 ± 0.12 | 3.25 | 0.928 ± 0.14 | 3.37 |
(6,10) | 0.626 ± 0.09 | 3.21 | 0.734 ± 0.13 | 3.96 | 0.842 ± 0.18 | 4.78 | 0.948 ± 0.23 | 5.42 |
Parameter | Healthy Subject (Mean ± sd) N = 48 | Unhealthy Subject (Mean ± sd) N = 48 | p-Value |
---|---|---|---|
Wavelet-based method | |||
Hurst exponent | 0.8402 ± 0.012 | 0.6019 ± 0.010 | 0.0001 |
DFA method | |||
α1 | 1.0106 ± 0.091 | 0.6079 ± 0.046 | 0.0001 |
α2 | 0.7913 ± 0.058 | 0.6923 ± 0.082 | 0.0001 |
αall | 0.8530 ± 0.072 | 0.6150 ± 0.071 | 0.0001 |
MFDFA method | |||
Generalized Hurst exponent at q = 2 | 0.8201 ± 0.031 | 0.5932 ± 0.024 | 0.0001 |
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Gospodinova, E.; Lebamovski, P.; Georgieva-Tsaneva, G.; Bogdanova, G.; Dimitrova, D. Methods for Mathematical Analysis of Simulated and Real Fractal Processes with Application in Cardiology. Mathematics 2022, 10, 3427. https://doi.org/10.3390/math10193427
Gospodinova E, Lebamovski P, Georgieva-Tsaneva G, Bogdanova G, Dimitrova D. Methods for Mathematical Analysis of Simulated and Real Fractal Processes with Application in Cardiology. Mathematics. 2022; 10(19):3427. https://doi.org/10.3390/math10193427
Chicago/Turabian StyleGospodinova, Evgeniya, Penio Lebamovski, Galya Georgieva-Tsaneva, Galina Bogdanova, and Diana Dimitrova. 2022. "Methods for Mathematical Analysis of Simulated and Real Fractal Processes with Application in Cardiology" Mathematics 10, no. 19: 3427. https://doi.org/10.3390/math10193427