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Article

Gas Chromatography Tandem Mass Spectrometry (GC-MS/MS) for High-Throughput Screening of Pesticides in Rice Samples Collected in Bangladesh and Saudi Arabia

1
Department of Chemistry, School of Natural Sciences, The University of Manchester, Manchester M13 9PL, UK
2
Department of Earth and Environmental Science, School of Natural Sciences, The University of Manchester, Manchester M13 9PL, UK
3
Bangladesh Atomic Energy Commission, Paramanu Bhaban, Agargaon, Dhaka 1207, Bangladesh
4
Chemistry Department, College of Science, Jouf University, Sakaka P.O. Box 2014, Saudi Arabia
5
Department of Chemical Engineering, School of Engineering, The University of Manchester, Manchester M13 9PL, UK
*
Author to whom correspondence should be addressed.
Processes 2024, 12(10), 2170; https://doi.org/10.3390/pr12102170 (registering DOI)
Submission received: 6 September 2024 / Revised: 25 September 2024 / Accepted: 4 October 2024 / Published: 5 October 2024
(This article belongs to the Special Issue Monitoring, Detection and Control of Food Contaminants)

Abstract

:
Gas Chromatography Tandem Mass Spectrometry (GC-MS/MS) with modified QuEChERS sample preparation has been applied to the high-throughput screening of pesticide residuals in rice collected from Bangladesh and Saudi Arabia markets. Both countries consume high volumes of rice, which is a fundamental food for their populations. We report optimized sample preparation and mass spectrometry analysis protocols, which can be rapidly deployed in analytical laboratories. The screening of four groups (organophosphorus, synthetic pyrethroid, organonitrogen, and organochlorine) of a total of 115 pesticides can be performed within ~10 min using a matrix-matched calibration. For most compounds, the limits of detection and quantification (LOD/LOQ) are well below the maximum residue levels (MRLs) of the main regulators. The method generally demonstrates acceptable recovery values (91 compounds 75–125% and 10 compounds 30–75%). Out of 55 rice samples analyzed, 16 samples (29%) contained pesticide residues above LOQ. Four samples contained chlorpyrifos with concentrations ranging from 21.3 to 71.9 µg/kg, ten samples contained tebuconazole (34.7–69.0 µg/kg), and three samples contained pirimiphos methyl (10.7–20.7 µg/kg). The concentrations of the pesticide residues detected in these samples are well below MRL of FAO/WHO (chlorpyrifos, 500 µg/kg; tebuconazole, 1500 µg/kg; pirimiphos methyl, 7000 µg/kg).

1. Introduction

The screening of food products for pesticides is an important and rapidly evolving field. Some standard analytical procedures involving LC-MS [1,2,3,4,5,6,7,8] and GC-MS [9,10,11,12,13,14,15,16] have been developed and published by organizations, such as ISO [17]. These standards typically provide general guidance for analysis, including recommendations for using tandem mass spectrometry over single quadrupole mass analysis in high matrix samples, as well as guidelines for sample preparation, evaluation, and presentation of analytical results. However, the specific requirements for analytical methods can vary widely from country to country. In some developing countries, these requirements are often unregulated, creating challenges for food laboratories. Both LC-MS and GC-MS, which are the main analytical techniques for analysis of the pesticide residuals in food, have many advantages over other methods. These are a superior detection limit down to a lower ppb- range and a high selectivity, which is achieved via the combination of chromatography (separation of the molecules based on their chemical properties) and mass spectrometry detection. Tandem mass spectrometry (MS/MS) is also usually equipped with two quadrupole mass filters, separated by a nitrogen-filled cell at lower pressures. The molecules of interest are first isolated in the first quadrupole, accelerated towards the fragmentation cell, and then the fragments (called quantitation ions), in turn, are selected by the second quadrupole and detected. This provides the technique with the additional layer of selectivity necessary for the unambiguous separation of the analyte molecules from abundant matrix ions.
In this work, we focus on the analysis of rice, which is a fundamental food in Saudi Arabia and is regularly consumed by a substantial proportion of the population [18,19]. Several studies have reported on the analysis of toxic trace elements, notably arsenic, in rice in Saudi Arabia [19,20,21], with concentrations as high as 464 µg/kg [21]. Among limited research on pesticides in Saudi Arabia, a study conducted by [19] revealed that among the 294 pesticides examined, 15 were present in rice. Out of these, six were fungicides and nine were insecticides, with detection frequencies of 22% and 26%, respectively. The pesticide levels varied between 11 and 517 μg/kg, with the highest detection rate observed for carbendazim (13.5%) and the lowest rate for biphenyl (0.6%).
There are even few large-scale studies on pesticides relating to Bangladeshi rice, which is striking. Bangladesh is predominantly an agrarian country, for which the agriculture sector contributes about ~11% to the country`s GDP [22]. Rice cultivation accounts for ~70% of the total agricultural production [23]. The total amount of pesticide used in Bangladesh for agricultural purposes was around 40,000 MT in 2021 [22].
This paper aims to simplify the analytical process for food analysts who wish to quickly implement high-throughput screening procedures for pesticides using GC-MS/MS equipment. We present a straightforward sample preparation procedure, describe the GC-MS experimental conditions, and outline a typical laboratory approach for method development and data evaluation. This is demonstrated through the screening of a large number of rice samples collected by our colleagues in Bangladesh and Saudi Arabia.

2. Materials and Methods

2.1. Samples Origin

Tangail is a district of the central region of Bangladesh. It is the largest district of the Dhaka division. The district encompasses 12 upazilas, 119 unions and 11 municipalities [24]. The southwest region of the district is occupied by the Jamuna floodplain and the southeast region contains the Brahmaputra floodplain. The soil in the Brahmaputra floodplain is generally well structured and looks dark gray in color. In the Jamuna floodplain, it is silty and sandy alluvium of gray loam [24]. The economy of Tangail is primarily based on agriculture, and rice (local and hybrid varieties) is the major crop growing in Tangail [24].
Twenty-five (n = 25) rice samples were collected from two upazilas (Delduar and Nagarpur) of the Tangail district (Appendix C contains the details of rice collected from Tangail). Rice samples were collected directly from farmers as well as local markets. Rice samples were oven-dried, ground to a powder and stored in a cool place for analysis.

2.2. Sample Preparation

The QuEChERS (quick, easy, cheap, effective, rugged, and safe) method uses a single-step buffered acetonitrile (MeCN) extraction and salting out the liquid–liquid partitioning from the water in the sample with MgSO4 [25,26]. Dispersive-solid-phase extraction was conducted (clean-up was carried out to remove organic acids, excess water, and other components with a combination of primary secondary amine (PSA) sorbent and MgSO4); then, the extracts were analyzed using mass spectrometry (MS) techniques after chromatographic analytical separation [9,13,27,28,29].
A slightly modified extraction process contained the following steps: a 7.5 g rice sample was weighed into a 50 mL extraction tube and 15 mL of HPLC-grade water containing 1% acetic acid was added to the rice and the sample was kept for soaking overnight. Acetonitrile (15 m) was then added to the tube, which was then shaken vigorously on a vortex mixer for 1 min at 2500 rpm. Anhydrous MgSO4 (6 g) and anhydrous sodium acetate (1.5 g) were added to the tube (extraction kit) and mixed again on a vortex mixer for 1 min at 2500 rpm and centrifuged at 3500 rpm for 10 min. Then, 10~15 mL supernatant extract (10–15 mL) was transferred to a 15 mL centrifuge tube and centrifuged at 5000 rpm for 10 min. Then, 1 mL of the supernatant liquid was transferred into a 2 mL microcentrifuge tube containing 150 mg MgSO4 and 50 mg PSA (clean-up kit). Samples were vortexed for 1 min at 2500 rpm and centrifuged at 10,000 rpm for 5 min. The supernatant (0.5 mL) was then collected and transferred to a 2 mL autosampler vial for instrumental analysis. A controlled blank extract and matrix-matched calibration standards were also prepared by following the above protocol [25,27,30].

2.3. Gas Chromatography Mass Spectrometry: Experimental Conditions

Agilent tandem mass spectrometry (Santa Clara, CA, USA) equipment with the following modules was used: Agilent 7890B GC, Agilent 7010B GC MS Triple Quad, and the PAL RTC 120 autosampler.
For the chromatography column, the parameters were as follows: HP-5MS, 30 m, a 0.250 mm diameter, and a film of 0.25μ m. The oven parameters: initial 150 C, hold for 0 min., heating to 280 C @ 30 C/min, hold at 280 °C for 10 min. Post run: 10 min @ 120 °C. Splitless inlet was heated to 250 C and purged with He at 3 mL/min. The column flow was 1.2 mL/min. Sample injection was 2 μ L. Collision cell: the quench gas was He 2.25 mL/min and collision followed N2 @ 1.5. mL/min. The quadrupole and transfer line were heated to 200 °C. The chromatography parameters (temperature steps, flow rate, injection volume, etc.) were optimized to deliver the best separation of the compounds within a reasonable time duration.

2.4. Method Development

The standard approach for developing and implementing new analytical methods in the laboratory involves using standards with known concentrations. For this work, four sets of pesticide standards were purchased from (Thames Restek UK Limited, High Wycombe, United Kingdom): organophosphorus compounds (set 32563 and set 32570), synthetic pyrethroid compounds (set 32568), organonitrogen compounds (set 32567), and organochlorine compounds (set 32564). The standards were originally bought as 100 µg/mL and then diluted in ethyl acetate using precision electronic pipettes (Sartorius, Göttingen, Germany) to an initial concentration of 200 µg/kg.
These solutions were utilized for method development, which involved multiple runs under varying experimental conditions (e.g., He flow, oven temperature program, and injection volume). The goal was to establish optimal experimental conditions to achieve maximum peak resolution, signal-to-noise ratio, and peak shape, as well as to determine the retention time for each pesticide. Mixing components from different sets was avoided to prevent potential chemical interactions and ion suppression/enhancement.
Additionally, the MS dwell time (the time the MS spends collecting each ion of interest) was limited by the number of ions of interest and their retention times, which can be very close for some pesticides. In this method, we analyzed 115 pesticides in 5 analytical standards across 5 independent analytical runs (i.e., each sample was analyzed 5 times). The dwell time in this case ranges from 10 to 100 ms, long enough to avoid compromising sensitivity. A very convenient feature of the vendor software is the “dynamic dwell time” adjustment, where the software calculates and adjusts the dwell time automatically based on retention time, and the total count rate is recalculated online automatically.
Typical total ion gas chromatograms (TICs) of the rice matrix spiked with 100 µg/kg of different pesticides standard mix (five sets) are presented in Figure 1. The chromatography peaks, which are the sum of all ions generated by the mass spectrometer at a certain elution time, exhibit reasonable shapes and heights. As expected, the ionization efficiencies of the pesticide components vary significantly, sometimes by several orders of magnitude. These ionization probabilities ultimately define the method’s sensitivity. While some pesticides (up to two at a time) may co-elute, this generally does not pose a problem because quantification is based on MS/MS transitions.
Appendix A summarizes the pesticides analyzed using this method, their retention times, as well as the ion transitions and associated collision energies and ion ratios. The identification is based on the two ion transitions (quantifier and qualifier). The well-known experimental approach is to isolate the parent ion on the first quadrupole filter, fragment it using a nitrogen-filled gas cell (the total pressure is 10−5 mBar), and then detect the fragments on the second quadrupole working in the scanning mode. Two transitions from each pesticide are measured and the ratio of the quantifier and qualifier ions are determined off-line and serves for the data quality control—should the matrix ions interfere with the pesticide signal, this ratio will change unpredictably from the theoretical one determined using the calibration standards.

2.5. Calibration Procedure and Long Stability Tests

In Figure 2, the screenshots derived from the data analysis software are presented for the case of chlorpyrifos for which the quantifier (314 → 258 a.m.u.) and qualifier (314 → 286 a.m.u.) transitions were used. From the experiments, it was established that the rice matrix generally enhances the ionization efficiencies of the pesticides in the ion source. The effect is not as dramatic as can be observed when using LC-MS equipment for which up to several orders of magnitude variations in ionization signal can be registered but can contribute up to ~30% to GC-MS/MS method uncertainties.
During analysis, we used matrix-matched calibration. Several grams of rice were used to prepare the blank rice matrix, which was later spiked with pesticides to generate a set of calibration standards with concentrations of 0 (blank), 25, 100, and 160 µg/kg. Prior to spiking, this matrix was thoroughly investigated for possible contamination with pesticides and was found to be clean (no ion signal was detected for any of the components). The detector, as expected, is linear within this concentration range. Concentrations of up to 1 mg/kg can be, in principle, accurately determined using these linear calibration curves.
In Figure 3, the results of the long stability tests are presented. The pure rice matrix was spiked with ~45 µg/kg of Fenchlophos (Ronnel) and the sample was analyzed 50 times. The total analysis time includes measuring the calibration curves. The oven heating–cooking circle took ~20 h to complete. The retention time of Fenchlophos was stable to within several seconds, and qualifier/quantifier ion ratios were stable to <1% (a standard deviation of the detected ratios); both are expected for this type of equipment. The average for measured concentrations, without recalibration, was 43 µg/kg with a standard deviation of ~9%, which constitutes the instrumental drift during 20 h measurements. This drift can be addressed by recalibrating, e.g., every 7 h (or every ~15 samples). In this case, from the experiments, the standard deviation on concentration measurements is ~4%, which is comparable to the expected precision for this equipment.

3. Results

3.1. Estimation of Limits of Detection (LOD) and Quantification (LOQ)

Limits of detection and quantification are important method parameters in terms of indicating the method’s ability to detect the compounds (LOD, especially important in high-throughput analysis) and quantify them with an acceptable level of uncertainty (LOQ). These parameters, according to the International Committee on Harmonizatio, can be estimated from the calibration curves [31].
The typical measurements involved the construction of the calibration curves with the matrix-matched calibration samples having concentrations in the range of LOQ (µg/kg–range in our case) and performing a linear regression analysis. In this case, the standard error of the calibration curve (or standard deviation of the y-intercept) and the slope of the curve can be used for the calculation of the LOD and LOQ using the following formulas:
LOD = 3.3 × (STDEV of Intercept)/slope; and LOQ = 10 × (STDEV of intercept)/slope.
The calculated LODs and LOQs for the matrix-matched rice pesticide calibration samples are listed in Table 1 and also compared, where data available with the maximum residue levels adopted by FAO/WHO [32], EU [33], USA [34], Saudi Arabia [35], and Bangladesh [36].
Based on the experimental data, the method demonstrates strong detection ability. For many compounds, the detection limits are well below the MRL of the main regulators, for example, the abundant and well-controlled chlorpyrifos (LOD = 3.2 µg/kg; LOQ = 9.8 µg/kg; MRL = 100–500 pbb), pirimiphos methyl (LOD = 4.3 µg/kg; LOQ = 13.1 µg/kg; MRL = 500–7000 µg/kg), and etebuconazole (LOD = 5.3 µg/kg; LOQ = 16.1 µg/kg; MRL = 1500). Similarly, with cis-permethrin, cypermethrin, deltamethrin, malathion, and others, the LOD and LOQ are several orders of magnitude lower than their corresponding MRLs of 2000–8000 µg/kg.
A large group of compounds have LOD/LOQ levels comparable with the regulators (usually at the level of 10–20 µg/kg), e.g., diazinon phenothrin, most DDDs, DDTs, DDEs, tetradifon, most organonitrogen compounds and most organophosphorus compounds.
Among those with high LOD/LOQ are some synthetic pyrethroid compounds: (resmethrin, and deltamethrin, both having high MRLs), phosalone, pyraclofos, pyrazophos, resmethrin, sulfotepp. These compounds have either low ionization efficiencies or weakly interact with the chromatography column, and this elute at the beginning of the analysis partially overlaps with the solvent tail. Chromatography, in principle, can be improved by reducing the temperature gradient and decreasing the helium flow rate. However, this will considerably increase the analysis time, which is not advisable for the high-throughput analysis we are pursuing.

3.2. Recoveries of Pesticides after Sample Preparation

The method recoveries mostly characterize the ability of the sample preparation procedure to extract the analyte from the sample matrix. In this experiment, the rice powder was spiked with the pesticide standards before sample preparation. After drying, the powder was thoroughly mixed and then the samples were prepared according to the sample procedure described earlier. The resultant concentrations of the pesticides in the vials for analysis were 50 µg/kg. Five usual calibration standard sets were used. A total of 15 spiked samples were prepared (5 standard sets with three samples of each standard set) and measured independently. The blank samples were also prepared and analyzed to make sure the rice matrix did not contain any detectable levels of pesticides, intrinsic or from possible cross-contamination.
The experimental recoveries are presented in Table 2. The standard deviation on recoveries (n = 3) is also presented. The method generally demonstrates acceptable recovery values. In total, 58 pesticides have recoveries of 75–100%, and 33 pesticides have recoveries of 100–125%. The lower part of the spectrum is 10 pesticides with recoveries of 30–75% and 11 pesticides with recoveries above 125%. The standard deviation of recoveries is on average 11% and varied usually 2–26%, with the lowest found for chlorpyrifos (~1%).

3.3. Analysis of the Rice Samples Collected in Bangladesh and Saudi Arabia

We have analyzed 55 rice samples (samples number 2–31 were collected in Saudi Arabia and 32–56 in Bangladesh) (Table 3). Sixteen samples contained pesticide residues above LOQ levels (29% of the total). Three pesticide compounds were detected. Four samples contained chlorpyrifos with concentrations ranging from 21.3 to 71.9 µg/kg. Ten samples contained tebuconazole (34.7–69.0 µg/kg), and three samples contained pirimiphos methyl (10.7–20.7 µg/kg). The concentrations of the pesticide residues detected in these samples are well below the MRL of main regulators (Table 4: chlorpyrifos, 500 µg/kg; tebuconazole, 1500 µg/kg; and pirimiphos methyl, 7000 µg/kg).

4. Discussion and Conclusions

While the pesticide residues found were all below the MRL limit, they were detected in a total of nine samples of Saudi rice (eight imported rice samples and one local rice sample) and eight samples of Bangladeshi rice. Regarding the Saudi Arabian rice samples, sample 20 had the highest residue concentration of the insecticide chlorpyrifos, with no significant difference from the study found by (Almutairi et al. 2021 [19]), and the lowest concentration was found in sample 3. The fungicide tebuconazole had the highest residue concentration in sample 14, while the lowest concentration was observed in sample 17; both of these concentrations were slightly higher than that of reported in (Almutairi et al. 2021 [19]) study. Pirimiphos-methyl was detected in only one sample: sample 17.
Multiple research works have been carried out to quantify several groups of pesticides in food items in Bangladesh, i.e., vegetables, fruits, fish and fish products, chicken meat, egg, milk, and dairy products [7,14,37,38,39,40,41,42,43,44,45]; however, not much has been carried out with a focus on rice or cereal grains and their by-products [46,47]. The mean concentrations of diazinon pesticide residue in rice grains collected from three fields of Gazipur district have been 560, 940, and 1680 µg/kg [46], In addition, fenitrothion has also been detected, with a mean concentration of 450 µg/kg [46]. Both pesticide residue concentrations in rice grains exceeded the regulatory values of the EU. Maize grain, flour and processed items (n = 90) collected from Dhaka have been analyzed for 27 pesticide residues using GC-MS. The mean concentrations of dichlorvos, methyl-parathion, chlorpyrifos, DDE, DDD, and DDT found in maize grains were 965, 44, 40, 7, 4, and 5 µg/kg [47]. The mean concentrations of dichlorvos, methyl-parathion, and chlorpyrifos in maize grain were higher than the MRL of the EU [33] but within the Bangladesh limit for chlorpyrifos in maize grains [36]. However, except for chlorpyrifos, all other detected pesticide residues were banned in Bangladesh for agricultural purposes [48].
Pesticides are frequently applied without precision in Bangladesh as well as other south and southeast Asian countries [49,50,51,52,53], which leads to several adverse effects on human health, from acute intoxication to chronic diseases that include various types of cancer (brain cancer, breast cancer, prostate cancer, bladder cancer, and colon cancer), Parkinson’s disease, neurotoxicity, and diabetes [54,55,56,57,58]. The results of the study indicate that the pesticide residues analyzed and detected in rice samples from Bangladesh and Saudi Arabia, including chlorpyrifos, tebuconazole, and pirimiphos-methyl, were below the MRLs set by EU regulators. These results highlight the need for continuous monitoring and control measures to maintain food safety standards, which, in turn, protects public health in countries where rice is a staple food.
The GC-MS method demonstrated high efficacy, providing sensitivity in detecting and quantifying pesticides. The relatively low values of the limits of detection and limits of quantification indicate that the method has the potential to detect pesticides at low concentrations. Future applications and development of this method could further enhance the detection and analysis of a wide range of pesticide residues in different matrices. It could be used to monitor food safety and investigate other potential hazards, such as the presence of mycotoxins and heavy metal contamination, to improve public health outcomes.

Author Contributions

I.S., F.T.A., M.A. and I.N.—sample preparation, equipment setup, experiment execution, and data evaluation, D.A.P.—data evaluation and project conceptualization. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by GCRF, UK. Grant number ST/R002681/1. Dr. M. Alrashdi was funded by The Ministry of Education—Kingdom of Saudi Arabia, the Saudi Arabia Cultural Bureau (SACB) and F. Ahmed was funded by Bangabandhu Science and Technology Fellowship Trust, Bangladesh.

Data Availability Statement

The original contributions presented in the study are included in the article, further inquiries can be directed to the corresponding author.

Conflicts of Interest

The authors declare no conflict of interest.

Appendix A

Table A1. Experimental retention times, quantifier and qualifier ion transitions and associated collision energies were used for quantitative analysis of pesticide residuals in rice.
Table A1. Experimental retention times, quantifier and qualifier ion transitions and associated collision energies were used for quantitative analysis of pesticide residuals in rice.
Quantifier TransitionQualifier Transition
Compound NameRT, minDwell Time, msIon1, a.m.u.Ion 2,
a.m.u.
CE1,
eV
Ion1, a.m.u.Ion2, a.m.u.CE2, eVIon Ratio
12,4′ DDD4.718.0235199152351652031
22,4′ DDE4.412.0246211202461763010
32,4′ DDT5.014.6235199202351652026
42,4′ Methoxychlor5.344.2227169252271154095
54,4′ DDD4.915.2235199152351652025
64,4′ DDE4.616.624621120246176309
74,4′ DDT5.226.123519920235165207
84,4′ Dichlorobenzophenone4.023.92501398139111815
94,4′ Methoxychlor olefin5.116.9227169252271154042
10Acrinathrin6.240.7289935208181540
11Aldrin4.025.129325782931864022
12Allethrin4.240.8123107512379100.8
13alpha BHC3.257.621918352191452529
14Anthraquinone4.065.9208180102081522290
15Azinphos ethyl6.540.716013251601051250
16Azinphos methyl6.174.116013251601051250
17beta BHC3.332.621918352191452540
18Bifenthrin5.649.2181166101811155019
19Bromfenvinfos4.415.2323170102671701050
20Bromfenvinfos methyl4.221.129517010295109102
21Bromphos ethyl4.417.4331316143293141499
22Bromphos methyl4.132.5331316143293141473
23Bupirimate4.721.52731935273108554
24Carbophenothion5.129.7342157101991431078
25Chlorbenside4.315.21259918125891636
26Chlorfenapyr4.738.2247227152472002584
27Chlorfenson (Ovex)4.513.0175111101117514100
28Chlorfenvinphos4.222.32952675267814066
29Chlorpyrifos methyl3.660.228627126288932650
30Chlorpyrifos4.065.93142865314258531
31Chlorthiophos4.929.8325269122692051472
32cis Chlordane4.411.7373301103732662034
33cis Nonachlor5.015.3409300182631932882
34cis Permethrin6.874.11831531516312856
35Coumaphos7.198.9362109152101821549
36Cyfluthrin5.936.6263127102262061050
37Cypermethrin6.235.220914120163127205
38Cyprodinil4.118.2224208152241972029
39delta BHC3.432.6219183102191452040
40Deltamethrin10.199.2253172525393567
41Diazinon3.373.930417915137841568
42Dieldrin4.514.53452638279243850
43Edifenphos5.244.831020183101731428
44Endosulfan ether3.538.82412061423920412165
45Endosulfan I4.412.2239204151951605165
46Endosulfan II4.817.3207172151951591024
47Endosulfan sulfate5.220.138728952722371522
48Endrin4.915.8263193352451733042
49Endrin aldehyde5.015.2250215241731381695
50Endrin ketone5.774.0250215241731381696
51EPN5.740.815711015157772550
52Ethion4.944.823117552311292584
53Ethylan (Perthane)4.718.5223179202231671287
54Etofenprox8.099.316313551631071581
55Fenamiphos4.416.530319583031541892
56Fenarimol6.499.0219107101391111558
57Fenchlorphos (Ronnel)3.734.1285270152852403080
58Fenitrothion3.743.527726052771092055
59Fenson4.123.914177877511419
60Fenthion3.935.2278169202781092043
61Fenvalerate8.999.116712512125892069
62Fipronil4.313.321317810213143206
63Flucythrinate8.199.119915751571071587
64Fludioxonil4.519.3248154252481273046
65Fluridone (Sonar)8.599.1328154103101541050
66Flusilazole4.621.1233165202331522055
67Flutriafol4.518.521912312219952054
68Folpet4.313.826013014260952014
69gamma BHC (Lindane)3.428.42191835219145516
70Heptachlor3.750.8272237102721434096
Heptachlor epoxide (isomer B)4.218.7217182221831192578
71Hexazinone5.343.61711285171831010
72Iodofenphos4.516.6377125103771091550
73Iprodione5.974.031424510314562087
74Isazophos3.474.02571625161119512
75Isodrin4.220.8193157201931232878
76lambda Cyhalothrin6.228.319716181971411229
77Lenacil5.260.31531365153110554
78Leptophos6.199.217112410171771823
79Malathion3.834.117399151581251518
80Methacrifos3.360.320818082081101912
81MGK-2644.124.51649810164931065
82Mirex6.499.1274239142722371462
83Myclobutanil4.618.817915251791251014
84Paclobutrazol4.417.323616720236125106
85Penconazole4.215.0248192152481572576
86Pentachlorothioanisole3.930.2296263529624657
87Phenothrin5.936.61831531512381822
88Phosalone6.173.93671825182138850
89Phosmet5.760.316013315160773050
90Pirimiphos ethyl4.174.1333180531818050.2
91Pirimiphos methyl3.843.630518052901511587
92Procymidone4.313.8283255828396847
93Profenofos4.636.833730953372671516
94Prothiofos4.522.5309239153092212579
95Pyraclofos6.540.73601945360138550
96Pyrazophos6.465.8221193102211491531
97Pyridaphenthion5.665.93401995340188517
98Pyrimethanil3.343.6198156251981182558
99Pyriproxyfen6.174.11369610136782063
100Quinalphos4.399.115712915146913044
101Resmethrin4.240.817114361711281218
102Sulfotepp3.440.8238146102021461021
103Sulprofos5.026.4322156101561411435
104tau Fluvalinate9.299.125020020250551547
105Tebuconazole5.360.3250153122501252018
106Tefluthrin3.374.2177137151771271532
107Terbacil3.357.51611175160118524
108Terbufos3.536.6231175102311292550
109Terbuthylazine3.260.22141735173132514
110Tetrachlorvinphos4.416.032910925329793528
111Tetradifon6.074.1356229103561591090
112Tetramethrin5.649.2164123516481100.2
113Tolclofos methyl3.734.1265250152652202552
114trans Chlordane4.413.6373301103732662051
115trans nonachlor4.512.0409300182371432453
116trans Permethrin6.974.11831531516312857
117Transfluthrin3.649.216314314163911297
118Triadimefon4.044.220818152081271546
119Triadimenol4.213.31681124168701088
120Triflumizole4.312.9278736278551250
121Vinclozolin3.674.2212172152121094078

Appendix B

Table A2. Description of the samples of the Saudi rice measured in this work. Imported Saudi rice samples (n = 20) were collected from Riyadh markets in 2022. Locally grown rice (Hasawiya rice) was collected from rice farms and the market of Al-Qurain village in Al-Ahsa Governorate, Eastern Province of Saudi Arabia (n = 10) in 2022 when rice is grown in the Kingdom of Saudi Arabia.
Table A2. Description of the samples of the Saudi rice measured in this work. Imported Saudi rice samples (n = 20) were collected from Riyadh markets in 2022. Locally grown rice (Hasawiya rice) was collected from rice farms and the market of Al-Qurain village in Al-Ahsa Governorate, Eastern Province of Saudi Arabia (n = 10) in 2022 when rice is grown in the Kingdom of Saudi Arabia.
OriginRice TypeCrop Year
SR1IndiaYellow long grain2019
SR2IndiaYellow long grain2021
SR3IndiaYellow long grain2020
SR4IndiaWhite long grain2021
SR5IndiaWhite long grain2020
SR6IndiaWhite long grain2020
SR7IndiaWhite long grain2019
SR8Al Hasa
(Saudi Arabia)
Red medium grain2020
SR9AustraliaWhite short grain2021
SR10Al Hasa
(Saudi Arabia)
Red medium grain2020
SR11PakistanWhite long grain2020
SR12ThailandWhite medium grain2021
SR13IndiaYellow long grain2021
SR14IndiaYellow long grain2020
SR15IndiaYellow long grain2021
SR16IndiaWhite long grain2020
SR17Al Hasa
(Saudi Arabia)
Red medium grain2020
SR18USAWhit medium grain2021
SR19Indiabrown long grain2019
SR20Al Hasa
(Saudi Arabia)
Red medium grain2021
SR21Al Hasa
(Saudi Arabia)
Red medium grain2021
SR22Al Hasa
(Saudi Arabia)
Red medium grain2019
SR23Al Hasa
(Saudi Arabia)
Red medium grain2019
SR24IndiaWhite long grain2021
SR25IndiaWhite long grain2021
SR26Al Hasa
(Saudi Arabia)
Red medium grain2022
SR27Al Hasa
(Saudi Arabia)
Red medium grain2022
SR28USAYellow medium grain2020
SR29Al Hasa
(Saudi Arabia)
Red medium grain2019
SR30IndiaWhite long grain2021

Appendix C

Table A3. Description of the samples of the Bangladesh rice measured in this work. All rice samples were collected from the Tangail district (n = 25). They were collected from local markets as well as the local farmers.
Table A3. Description of the samples of the Bangladesh rice measured in this work. All rice samples were collected from the Tangail district (n = 25). They were collected from local markets as well as the local farmers.
IDOriginRice TypeCrop Year
BR1Rice Mill/MarketWhite medium grain2022
BR2FarmersWhite medium long grain2022
BR3Rice Mill/MarketOff-white small grain2022
BR4FarmersOff-white small grain2022
BR5FarmersLight brown medium grain2022
BR6FarmersOff-white medium grain2022
BR7FarmersOff-white medium grain2022
BR8FarmersLight brown small grain2022
BR9Rice Mill/MarketWhite small grain2022
BR10Rice Mill/MarketOff-white medium grain2022
BR11FarmersYellowish white long grain2022
BR12FarmersOff-white medium grain2022
BR13FarmersOff-white small grain2022
BR14Rice Mill/MarketWhite medium grain2022
BR15Rice Mill/MarketWhite medium grain2022
BR16FarmersOff-white medium grain2022
BR17FarmersLight brown small grain2022
BR18FarmersOff-white medium grain2022
BR19FarmersOff-white medium grain2022
BR20FarmersLight brown small grain2022
BR21Rice Mill/MarketLight brown small grain2022
BR22Rice Mill/MarketWhite small grain2022
BR23FarmersYellowish white medium grain2022
BR24FarmersOff-white medium grain2022
BR25FarmersOff-white small grain2022

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Figure 1. Typical total ion gas chromatograms (TICs) of the rice matrix spiked with 100 µg/kg of different pesticides standard mix (a) organophosphorus compounds (set 32563), (b) organophosphorus compounds (set 32570), (c) synthetic pyrethroid compounds (set 32568), (d) organonitrogen compounds (set 32567), and (e) organochlorine compounds (set 32564).
Figure 1. Typical total ion gas chromatograms (TICs) of the rice matrix spiked with 100 µg/kg of different pesticides standard mix (a) organophosphorus compounds (set 32563), (b) organophosphorus compounds (set 32570), (c) synthetic pyrethroid compounds (set 32568), (d) organonitrogen compounds (set 32567), and (e) organochlorine compounds (set 32564).
Processes 12 02170 g001
Figure 2. Screenshots from the data analysis software, the examples of (a) the GCMS signal from the matrix-matched chlorpyrifos calibration standards for the blank, 25, 50, 100, and 160 µg/kg with the quantifier (314 → 258 a.m.u.)/qualifier (314 → 286 a.m.u.) transitions, (b) the overlaid GC signals for these calibrants with other pesticides components also visible, and (c) the resultant linear calibration curve for this concentrations range.
Figure 2. Screenshots from the data analysis software, the examples of (a) the GCMS signal from the matrix-matched chlorpyrifos calibration standards for the blank, 25, 50, 100, and 160 µg/kg with the quantifier (314 → 258 a.m.u.)/qualifier (314 → 286 a.m.u.) transitions, (b) the overlaid GC signals for these calibrants with other pesticides components also visible, and (c) the resultant linear calibration curve for this concentrations range.
Processes 12 02170 g002
Figure 3. A long stability test during which 50 rice samples spiked with ~45 µg/kg of fenchlorphos (Ronnel) was measured within ~20 h. Experimental values for reproducibility of (a) retention time (min.), (b) concentration measurements (µg/kg), and (c) the ratios of quantifier and qualifier ions.
Figure 3. A long stability test during which 50 rice samples spiked with ~45 µg/kg of fenchlorphos (Ronnel) was measured within ~20 h. Experimental values for reproducibility of (a) retention time (min.), (b) concentration measurements (µg/kg), and (c) the ratios of quantifier and qualifier ions.
Processes 12 02170 g003
Table 1. Limits of detection (LOD) and quantification (LOQ) calculated for the matrix-matched (rice) analytical standards for different groups of pesticides. Maximum residue levels (MRLs) adopted by FAO/WHO, EU, USA, Saudi Arabia, and Bangladesh are also indicated.
Table 1. Limits of detection (LOD) and quantification (LOQ) calculated for the matrix-matched (rice) analytical standards for different groups of pesticides. Maximum residue levels (MRLs) adopted by FAO/WHO, EU, USA, Saudi Arabia, and Bangladesh are also indicated.
PesticidesRT, minLOD, µg/kgLOQ, µg/kgMaximum Residue Level (MRL), µg/kg
FAO/WHO CodexEUSaudi ArabiaUSABangladesh
1Azinphos ethyl6.532.397.8 50
2Chlorpyrifos3.93.29.8500500500100500
3Chlorpyrifos methyl3.67.422.6 30001006000
4Diazinon3.2412.1 10
5EPN5.628.887.3
6Fenitrothion3.710.632.4600050 20
7Isazophos3.314.644.4
8Phosalone636.6111.0 10
9Phosmet5.650.5153 10
10Pirimiphos ethyl48.726.6
11Pirimiphos methyl3.74.313.170005007000 500
12Pyraclofos6.549.8151.1
13Pyrazophos6.333.7102.3 10
14Pyridaphenthion5.532.297.6
15Quinalphos4.255.4167.9 10 10
16Acrinathrin6.212.437.6
17Allethrin4.151.6156.5
18Anthraquinone3.92.57.7
19Bifenthrin5.51.13.3 10 50
20cis- Permethrin6.72.37.2200050 50
21Cypermethrin6.19.930.1200020002000 2000
22Deltamethrin9.922.367.72000100020001500
23Fenvalerate8.815.948.3 2020002500
24Flucythrinate813.240
25lambda Cyhalothrin6.1927.4100020010001000
26Phenothrin5.81133.5 50 10
27Resmethrin4.2158.3479.8 20 3000
28tau- Fluvalinate9.121.665.7 10
29Tefluthrin3.218.556 10
30Tetramethrin5.514.243.2
31trans- Permethrin6.8412.32000502000
32Transfluthrin3.527.884.3
332,4′ DDD4.72.47.3 50
342,4′ DDE4.32.88.7
352,4′ DDT4.94.413.5100100500
362,4′ Methoxychlor5.221.164.2
374,4’ DDD4.859.8181.3 50
384,4’ DDE4.52.37.2
394,4’ DDT5.29.428.6100100500
404,4’ Dichlorobenzophenone3.912.237.1
41Aldrin3.923.671.620102020
42alpha- BHC3.16.720.5 10
43beta- BHC3.271.5216.7 10
44Chlorbenside4.32.88.7 10
45Chlorfenson (Ovex)4.54.212.7 10
46cis- Chlordane4.45.717.320 20
47cis- Nonachlor4.96.218.8
48delta- BHC3.2618.2 10
49Dieldrin4.45.717.520102020
50Endosulfan ether3.53.811.6
51Endosulfan I4.316.550.1 50
52Endosulfan II4.813.641.3
53Endosulfan sulfate5.212.738.7
54Endrin4.81.44.3 10
55Endrin aldehyde53.410.5
56Endrin ketone5.73.19.6
57Ethylan (Perthane)4.72.57.7
58Fenson4.12.16.4
59Gamma BHC (Lindane)3.48.626 10
60Heptachlor3.736.8111.720102030
61Heptachlor epoxide (isomer B)4.232.398
62Isodrin4.16.118.7
63Mirex6.32.26.7
64Pentachlorothioanisole3.93.811.6
65Tetradifon5.91.85.7 10
66trans- Chlordane4.32.26.620 20
67trans- Nonachlor4.4824.4
68Bupirimate4.63.811.4 10
69Chlorfenapyr4.76.118.5 20
70Cyprodinil4.14.112.5 10
71Etofenprox7.96.720.41010101010
72Fenarimol6.42.36.9 20
73Fipronil4.14.313.1105104010
74Fludioxonil4.53.711.250105020
75Fluridone (Sonar)8.528.386 100
76Flusilazole4.61.54.5 10 10
77Flutriafol4.44.614 1000 500
78Folpet4.219.158
79Hexazinone5.211.635.2
80Lenacil5.12.47.4 100
81MGK-26445.215.9
82Myclobutanil4.64.814.7 10 30
83Paclobutrazol4.35.115.4 10
84Penconazole4.16.419.5 10
85Procymidone4.26.319.1
86Pyrimethanil3.22.57.8 50
87Pyriproxyfen63.610.9 50 1100
88Tebuconazole5.35.316.1150015001500 1500
89Terbacil3.346.2140.2
90Terbuthylazine3.11.85.6 10
91Triadimefon3.94.714.4 10
92Triadimenol4.24.413.6 10
93Triflumizole4.214.443.6 20
94Vinclozolin3.51.54.6 10
95Bromfenvinfos methyl4.210.632.2
96Bromphos ethyl4.34.313.2 10
97Bromphos methyl41854.7
98Carbophenothion55.416.4
99Chlorfenvinphos4.15.115.4 10
100Chlorthiophos4.93.19.3
101Coumaphos716.349.4
102Edifenphos5.114.544.1 20
103Ethion4.85.316 10 30
104Fenamiphos4.48.425.4
105Fenchlorphos (Ronnel)3.78.325.2
106Fenthion3.91030.5501050 50
107Iodofenphos4.513.842
108Leptophos66.419.4
109Malathion3.87.823.6 8000 8000
110Profenofos4.56.218.9 10
111Prothiofos4.52.16.3
112Sulfotepp3.2223676
113Sulprofos4.94.413.4
114Tetrachlorvinphos4.310.632.3
115Tolclofos methyl3.67.914.2 10
Table 2. Typical recoveries (%) and standard deviation on recovery measurements (n = 3) of the pesticides in rice samples after sample preparation.
Table 2. Typical recoveries (%) and standard deviation on recovery measurements (n = 3) of the pesticides in rice samples after sample preparation.
NameRecovery, %St. Deviation, n = 3
2,4′ DDD852
2,4′ DDE844
2,4′ DDT894
2,4′ Methoxychlor854
4,4′ DDD814
4,4′ DDE753
4,4′ DDT885
4,4′ Dichlorobenzophenone793
Acrinathrin11213
Aldrin762
Allethrin5313
alpha BHC9615
Anthraquinone827
Azinphos ethyl10721
beta BHC6332
Bifenthrin892
Bromfenvinfos methyl9323
Bromphos ethyl10228
Bromphos methyl878
Bupirimate1056
Carbophenothion916
Chlorbenside7611
Chlorfenapyr1045
Chlorfenson (Ovex)955
Chlorfenvinphos9513
Chlorpyrifos methyl10723
Chlorpyrifos1091
Chlorpyrifos methyl887
Chlorthiophos894
cis Nonachlor674
cis Permethrin864
Coumaphos11115
Cypermethrin12212
Cyprodinil1025
delta BHC753
Deltamethrin11613
Diazinon8513
Dieldrin878
Edifenphos9624
Endosulfan ether982
Endosulfan I10916
Endosulfan II767
Endosulfan sulfate1009
Endrin884
Endrin aldehyde455
Endrin ketone915
EPN935
Ethion975
Ethylan (Perthane)882
Etofenprox1045
Fenarimol1149
Fenchlorphos (Ronnel)804
Fenitrothion7810
Fenson695
Fenthion816
Fenvalerate1129
Fipronil1094
Flucythrinate11513
Fludioxonil11011
Flusilazole11613
Flutriafol1126
Folpet122
gamma BHC (Lindane)14485
Heptachlor7517
Heptachlor epoxide (isomer B)3810
Hexazinone12722
Iodofenphos996
Iprodione1025
Isazophos9718
Isodrin7720
lambda Cyhalothrin1189
Lenacil12829
Leptophos907
Malathion9212
MGK-264734
Mirex535
Myclobutanil11510
Paclobutrazol1164
Penconazole10713
Pentachlorothioanisole3318
Phenothrin824
Phosalon13228
Phosalone13026
Phosmate15936
Phosmet16234
Pirimiphos ethyl763
Pirimiphos methyl8318
Procymidone1105
Profenofos9016
Prothiofos823
Pyrazophos10714
Pyridaphenthion10714
Pyrimethanil9614
Pyriproxyfen1146
Quinalphos779
Sulfotepp9619
Sulprofos794
tau Fluvalinate12626
Tebuconazole13413
Tefluthrin924
Terbacil16399
Terbuthylazine9649
Tetrachlorvinphos9025
Tetradifon943
Tetramethrin16325
Tolclofos methyl745
trans Chlordane846
trans nonachlor9011
trans Permethrin885
Transfluthrin8818
Triadimefon1028
Triadimenol11310
Triflumizole11018
Vinclozolin1064
Table 3. Pesticide residuals were detected in the 55 samples collected in Bangladesh and Saudi Arabia.
Table 3. Pesticide residuals were detected in the 55 samples collected in Bangladesh and Saudi Arabia.
Sample NumberExp. Run 1,
µg/kg
Exp. Run 2,
µg/kg
Exp. Run 3,
µg/kg
Mean,
µg/kg
St. Dev
Chlorpyrifos
328.618.816.421.36.5
1529.826.824.627.12.6
2075.470.669.871.93.0
5623.423.221.222.61.2
Tebuconazole
266.263.868.066.02.1
748.449.248.848.80.4
1469.467.670.069.01.2
173939.437.438.61.1
2538.24040.239.51.1
3243.442.644.343.40.9
373532.836.434.71.8
4143.842.638.641.72.7
4538.637.43737.70.8
5350.249.245.448.32.5
Pirimiphos methyl
1712.610.68.810.71.9
3614.411.610.412.12.1
4622.420.81920.71.7
Table 4. The maximum residue levels (MRLs) (µg/kg) of chlorpyrifos, tebuconazole, and pirimiphos methyl adopted by FAO/WHO, EU, USA, Saudia Arabia, and Bangladesh [32,33,34,35,36].
Table 4. The maximum residue levels (MRLs) (µg/kg) of chlorpyrifos, tebuconazole, and pirimiphos methyl adopted by FAO/WHO, EU, USA, Saudia Arabia, and Bangladesh [32,33,34,35,36].
PesticideMRL FAO/WHO Codex, µg/kgMRL EU, µg/kgMRL Saudi Arabia, µg/kgMRL USA, µg/kgMRL Bangladesh, µg/kg
Chlorpyrifos500500500100500
Tebuconazole150015001500 1500
Pirimiphos methyl70005007000 500
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Strashnov, I.; Ahmed, F.T.; Alrashdi, M.; Nesmiyan, I.; Polya, D.A. Gas Chromatography Tandem Mass Spectrometry (GC-MS/MS) for High-Throughput Screening of Pesticides in Rice Samples Collected in Bangladesh and Saudi Arabia. Processes 2024, 12, 2170. https://doi.org/10.3390/pr12102170

AMA Style

Strashnov I, Ahmed FT, Alrashdi M, Nesmiyan I, Polya DA. Gas Chromatography Tandem Mass Spectrometry (GC-MS/MS) for High-Throughput Screening of Pesticides in Rice Samples Collected in Bangladesh and Saudi Arabia. Processes. 2024; 12(10):2170. https://doi.org/10.3390/pr12102170

Chicago/Turabian Style

Strashnov, Ilya, Farah T. Ahmed, May Alrashdi, Inna Nesmiyan, and David A. Polya. 2024. "Gas Chromatography Tandem Mass Spectrometry (GC-MS/MS) for High-Throughput Screening of Pesticides in Rice Samples Collected in Bangladesh and Saudi Arabia" Processes 12, no. 10: 2170. https://doi.org/10.3390/pr12102170

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