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Article

Morphological and Phylogenetic Characterization of Five Novel Nematode-Trapping Fungi (Orbiliomycetes) from Yunnan, China

1
Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
2
Institute of Eastern-Himalaya Biodiversity Research, Dali University, Dali 671003, China
3
School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
4
The Provincial Innovation Team of Biodiversity Conservation and Utility of the Three Parallel Rivers Region, Dali University, Dali 671003, China
5
Yunling Back-and-White Snub-Nosed Monkey Observation and Research Station of Yunnan Province, Dali 671003, China
*
Authors to whom correspondence should be addressed.
J. Fungi 2023, 9(7), 735; https://doi.org/10.3390/jof9070735
Submission received: 26 May 2023 / Revised: 4 July 2023 / Accepted: 5 July 2023 / Published: 7 July 2023

Abstract

:
Nematode-trapping fungi are widely studied due to their unique morphological structure, survival strategy, and potential value in the biological control of harmful nematodes. During the identification of carnivorous fungi preserved in our laboratory, five novel nematode-trapping fungi were established and placed in the genera Arthrobotrys and Drehslerella based on morphological and multigene (ITS, TEF, and RPB2) phylogenetic analyses. A. hengjiangensis sp. nov. and A. weixiensis sp. nov. are characterized by producing adhesive networks to catch nematodes. Dr. pengdangensis sp. nov., Dr. tianchiensis sp. nov., and Dr. yunlongensis sp. nov. are characterized by producing constricting rings. Morphological descriptions, illustrations, taxonomic notes, and phylogenetic analysis are provided for all new taxa; a key for Drechslerella species is listed; and some deficiencies in the taxonomy and evolution study of nematode-trapping fungi are also discussed herein.

1. Introduction

Nematode-trapping fungi (NTF) are a group of fungi that can produce unique structures (trapping structures) to capture nematodes [1,2,3]. They have attracted much attention for over 180 years since Corda (1839) reported the first species (Arthrobotrys superba Corda) because of their unique survival strategy, excellent application potential in nematode control, and significance of maintaining the balance of nematode populations in the ecosystem [4,5,6,7,8]. Orbiliomycetes NTF is the research focus of NTF due to their abundant species, diversified trapping structures, and mature research methods [3,9,10]. Currently, 119 Orbiliomycetes NTF species have been reported and divided into Arthrobotrys, Dactylellina, and Drechslerella based on their trapping structures according to modern molecular biology research [11,12,13,14].
Arthrobotrys, the most widespread and diverse (67 species) genus among Orbiliomycetes NTF, was established by Corda (1839) with A. superba Corda, which is characterized by 1-septate conidia growing in clusters on the nodes of the conidiophores [4]. With the improvement in the isolation method, more species were discovered, and the characteristic of Arthrobotrys was revised as producing obovoid, elliptic, pyriform 0–3-septate conidia on the nodes or short denticles of the conidiophores [2,15,16,17]. However, the taxonomy system based on these characteristics still needs to be clarified due to confusion caused by scholars attaching different importance to morphological features. The development of molecular biology has brought a significant breakthrough in the taxonomic study of NTF. Methods such as restriction fragment length polymorphism (RFLP), random amplified polymorphic DNA (RAPD), and molecular phylogenetics have gradually clarified the importance of the trapping structure in NTF classification [11,12,13,14]. Accordingly, the main characteristic of Arthrobotrys has also been revised again to produce adhesive networks to capture nematodes [3]. Species in Arthrobotrys are essential materials for developing bio-control agents for plant and animal parasitic nematodes because of their excellent competition, adaptation, and reproductive ability [18,19].
Drechslerella is the smallest genus (17 species) among Orbiliomycetes NTF, which separated from Monacrosporium by Subrammanian with Dr. acrochaeta (Drechsler) Subram as the type species based on conidia producing filamentous appendages at the apex [20]. However, Liu and Zhang (1994) pointed out that the filamentous appendage is not a stable and valid feature because it is formed by conidia germination, which is common in many Arthrobotrys and Dactylellina species [21]. Accordingly, Drechslerella is considered to be an invalid genus. Subsequently, the taxonomy of NTF was studied based on molecular phylogenetic analysis. All species produce constricting rings clustered into a monophyletic clade named Drechslerella, characterized by producing constricting rings composed of three cells and locking nematodes via the rapid expansion of the three cells [3,11,12,13,14]. This method of capturing nematodes mainly via mechanical force significantly differs from species in Arthrobotrys and Dactylellina (mainly capturing nematodes with adhesive material) [2,3]. Therefore, Drechslerella is a unique genus among Orbiliomycetes NTF and a key group in the origin and evolution study of carnivorous fungi.
NTF is a crucial node in fungal evolution and a good material for studying fungal adaptive evolution. The discovery of new species contributes to the development of related research and provides more materials for developing bio-control agents of parasitic nematodes. This research aims to report five new NTF species and list a key species of Drechslerella that has been studied less.

2. Materials and Methods

2.1. Sample Collection

Terrestrial soil and freshwater sediment samples involved in this study were collected from Yunnan Province, China. The detailed collection methods are the same as Zhang et al.’s [22].

2.2. Fungal Isolation

The soil sprinkling technique and baited plates method [3,23,24,25] were used to incubate nematode-trapping fungi (NTF) in the soil samples. The single-spore isolation method was used to obtain the pure culture of NTF. The details of the above three methods are the same as Zhang et al. [22].

2.3. Morphological Observation

The observation well and nematode baiting methods [26] were used to induce the trapping structure of NTF in accordance with Zhang et al. [22]. All micromorphological features, such as conidia, conidiophore, trapping structure, and chlamydospores, were photographed and measured with an Olympus BX53 differential interference microscope (Olympus Corporation, Tokyo, Japan).

2.4. DNA Extraction, PCR Amplification, and Sequencing

The total genomic DNA of isolates was extracted from the mycelium grown on potato dextrose agar (PDA) plates using a rapid fungal genomic DNA isolation kit (Sangon Biotech Company, Limited, Shanghai, China). The ITS, TEF, and RPB2 regions were amplified with the primer pairs ITS4-ITS5 [27], 526F-1567R [28], and 6F-7R [29], respectively. The PCR amplification was performed according to Zhang et al. [22]. A DiaSpin PCR Product Purification Kit (Sangon Biotech Company, Limited, Shanghai, China) was used to purify the PCR products according to the user manual. The purified PCR products of the ITS and RPB2 regions were sequenced in the forward and reverse directions using PCR primers, and TEF genes were sequenced using the primer pair 247F-609R [11] (BioSune Biotech Company, Limited, Shanghai, China).
Sequences were checked, edited, and assembled via SeqMan v. 7.0 [30]. The sequences generated in this study were deposited in the GenBank database at the National Center for Biotechnology Information (NCBI; https://www.ncbi.nlm.nih.gov/; accessed on 20 March 2023).

2.5. Phylogenetic Analysis

BLASTn search (BLASTn; https://blast.ncbi.nlm.nih.gov/; accessed on 11 March 2023) was used to compare the sequences generated in this study against the NCBI GenBank database. The BLASTn search results and the morphological features (trapping structure) of these five species indicated that they belong to the genus Arthrobotrys and Drechslerella. Therefore, all Arthrobotrys and Drechslerella taxa were searched in Species Fungorum (http://www.speciesfungorum.org; accessed on 12 March 2023) and checked individually according to the relevant documents to ensure that all Arthrobotrys and Drechslerella taxa were considered in this study [1,2,3,7,9,10,11,22,31,32,33]. All reliable ITS, TEF, and RPB2 sequences of Arthrobotrys and Drechslerella taxa were downloaded from the GenBank database (Table S1). Online program MAFFT v.7 (http://mafft.cbrc.jp/alignment/server/; accessed on 15 March 2023) [34] was used to generate the alignments of three genes, BioEdit v7.2.3 [35] was used to manually adjust the three alignments, and the three alignments were then linked with MEGA6.0 [36]. Vermispora fusarina YXJ 02-13-5 and Vermispora leguminaceae AS 6.0291 were set as outgroups. Phylogenetic trees were inferred via maximum likelihood (ML) and Bayesian inference (BI) analyses.
The best-fit optimal substitution models of ITS, TEF, and RPB2 were selected as GTR+I+G, TrN+I+G, and GTR+I+G via jModelTest v2.1.10 [37] under the Akaike Information Criterion (AIC).
Maximum likelihood (ML) analysis was implemented using IQ-Tree v1.6.5 according to Zhang et al. [22]. The statistical bootstrap support values (BS) were computed using rapid bootstrapping with 1000 replicates [38].
Bayesian inference (BI) analysis was conducted with MrBayes v. 3.2.6 [39] according to Zhang et al. [22]. The remaining 75% of trees were used to calculate the posterior probabilities (PP) in the majority rule consensus tree.
FigTree v1.3.1 [40] was used to visualize the trees. The backbone tree was edited and reorganized using Microsoft PowerPoint (2013) and Adobe Photoshop CS6 software (Adobe Systems, San Jose, CA, USA).

3. Results

3.1. Phylogenetic Analysis

The combined ITS, TEF, and RPB2 alignment dataset consisted of 104 ITS sequences, 60 TEF sequences, and 67 RPB2 sequences from 66 Arthrobotrys taxa representing 62 valid species (plus our 2 new species), 32 Drechslerella taxa representing 21 valid species (plus our 3 new species), other related taxa in Orbiliaceae (Dactylellina: 4 species), and 2 outgroup taxa. The final dataset comprised 2038 characters (627 for ITS, 822 for RPB2, and 542 for TEF), among which 900 bp were constant, 1087 bp were variable, and 886 bp were parsimony informative.
A best-scoring maximum likelihood tree was performed with a final ML optimization likelihood value of −6158.611237. Within the Bayesian analysis (BI), the Bayesian posterior probabilities were evaluated with a final average standard deviation of the split frequency of 0.009264. The trees inferred by ML and BI showed slightly different topologies in some clusters, but both trees showed that all tested nematode-trapping fungi were clustered into two large clades, and five new species showed distinct divergence from known species. The best-scoring ML tree was selected to present herein (Figure 1), and the Bayesian majority rule consensus tree (BI) was also attached in the Supplementary Materials (Figure S1).
The phylogenetic tree inferred from the ITS, TEF, and RPB2 combined dataset placed five pairs of new isolates in Arthrobotrys and Drechslerella. A. hengjiangensis sp.nov. clustered with A. jinpingensis and Orbilia jesu-laurae with 99% MLBS and 0.98 BYPP support. A. weixiensis sp.nov. was sister to A. globospora with high support (99% MLBS, 1.00 BYPP). Dr. pengdangensis sp.nov. and Dr. tianchiensis sp.nov. were clustered together (89% MLBS). Dr. yunlongensis sp.nov. was clustered with four other species that produce fusiform conidia (100% MLBS, 1.00 BYPP) (Figure 1 and Figure S1).

3.2. Taxonomy

Arthrobotrys hengjiangensis F. Zhang & X.Y. Yang sp. nov. (Figure 2).
Index Fungorum number: IF900409; Facesoffungi number: FOF14151.
Etymology: The species name “hengjiangensis” refers to the name of sample collection site: Hengjiang County, Zhaotong City, Yunnan Province, China.
Material examined: CHINA, Yunnan Province, Zhaotong City, Hengjiang County, Hengjiang River, N 28°32′31.8″, E 104°19′09.5″, from freshwater sediment, 12 July 2014, F. Zhang. Holotype CGMCC 3.249834, preserved in the China General Microbiological Culture Collection Center. Ex-type culture DLUCC 34-1, preserved in the Dali University Culture Collection.
Colonies on PDA: initially white and turned to pale pink or yellowish after 2 weeks, cottony, growing rapidly, reaching 60 mm diameter after 10 days at 26 °C. Mycelium: partly superficial, partly immersed, composed of septate, branched, smooth, and hyaline. Conidiophores: 182.5–343 µm ( x ¯ = 268.4 µm, n = 50) long, 3–5.5 µm ( x ¯ = 3.7 µm, n = 50) wide at the base, gradually tapering upwards to the apex with 2.5–3.5 µm ( x ¯ = 2.7 µm, n = 50) wide, erect, septate, unbranched or sometimes branched, producing a node at the apex or several separate nodes by repeated elongation of conidiophores, each node consisting of 3–8 papilliform bulges and bearing 3–8 conidia. Conidia: 14.5–29.5 × 9.5–18 µm ( x ¯ = 19.9 × 12.7 μm, n = 50), obpyriform or drop-shaped, rounded at the apex, tapering towards narrow with tapering base, 0–2-septate (mostly 0 or 1-septate), and hyaline. Chlamydospore 7–14 × 5–10 µm ( x ¯ = 9.5 ×7.6 μm, n = 50), cylindrical, globose or ellipsoidal, hyaline, and in chains when present. Nematodes were captured with adhesive networks.
Additional specimen examined: CHINA, Yunnan Province, Zhaotong City, Hengjiang County, Hengjiang River, N 28°32′31.8″, E 104°19′09.5″, from freshwater sediment, 12 July 2014, F. Zhang. Living culture XA190.
Notes: Phylogenetically, Arthrobotrys hengjiangensis clusters together with A. jinpingensis and Orbilia jesu-laurae with high support value (99% MLBS, 0.98 BYPP). A. hengjiangensis was 4.3% (27/626 bp) and 3.2% (20/620 bp) different from A. jinpingensis and Orbilia jesu-laurae in ITS sequences. Morphologically, these three species are similar in their conidia shape and the nodes of conidiophores [22,41]. However, A. hengjiangensis can be distinguished from A. jinpingensis by its wider conidia [A. hengjiangensis, 9.5–18 (12.7) µm versus A. jinpingensis, 6.5–14.5 (10.8) µm], 2-septate conidia with tapering base, and branched conidiophores [22]. The difference between A. hengjiangensis and O. jesu-laurae is that the conidiophores of O. jesu-laurae branched at the apex. In contrast, the conidiophores of A. hengjiangensis branched in the middle and upper parts. In addition, Orbilia jesu-laurae does not produce 2-septate conidia, while A. hengjiangensis does. Furthermore, the conidia produced by A. hengjiangensis have a more pointed base than those of O. jesu-laurae. The conidia of O. jesu-laurae are often slightly constricted at the septum, while those of A. hengjiangensis do not [41].
Arthrobotrys weixiensis F. Zhang & X.Y. Yang sp. nov. (Figure 3).
Index Fungorum number: IF900410; Facesoffungi number: FOF14152.
Etymology: The species name “weixiensis” refers to the name of sample collection site: Weixi County, Diqing City, Yunnan Province, China.
Material examined: CHINA, Yunnan Province, Diqing City, Weixi County, N 27°12′40.3″, E 99°05′24.2″, from terrestrial soil, 26 July 2014, F. Zhang. Holotype CGMCC3.24984, preserved in the China General Microbiological Culture Collection Center. Ex-type culture DLUCC 35-1, preserved in the Dali University Culture Collection.
Colonies on PDA: white, cottony, growing rapidly, reaching 55 mm diameter after 9 days in the incubator at 26 °C. Mycelium: partly superficial, partly immersed, composed of septate, branched, smooth, and hyaline. Conidiophores 165–364.5 µm ( x ¯ = 253.4 µm, n = 50) long, 2.5–5 µm ( x ¯ = 3.4 µm, n = 50) wide at the base, gradually tapering upwards to the apex 1.5–3 µm ( x ¯ = 2.2 µm, n = 50) wide, erect, septate, unbranched, hyaline, producing 1–3 short denticles at the apex, and each denticle bearing a single conidium. Conidia: two types: I-type conidia: 22.5–39 × 14–27.5 µm ( x ¯ = 27.8 × 17.7 μm, n = 50), drop-shaped or obovate, rounded at the apex, tapering towards narrow with subacute and truncate base, 1–2-septate (mostly 1-septate, usually located at the base), hyaline, with the largest cell located at the apex. II-type conidia: 30.5–48 × 14–27 µm ( x ¯ = 36.7 × 19.5 μm, n = 50), fusiform, rounded at the apex, tapering towards narrow with subacute and truncate base, 1–2-septate (mostly 2-septate, usually located at both ends of the conidia), and hyaline, with the largest cell located at the middle of the conidia. Chlamydospore: 6–24 × 3.5–24 µm ( x ¯ = 13.9 × 9.1 μm, n = 50), cylindrical, globose or ellipsoidal, hyaline or yellowish, and in chains when present. Nematodes were captured with adhesive networks.
Additional specimen examined: CHINA, Yunnan Province, Diqing City, Weixi County, N 27°12′40.3″, E 99°05′24.2″, from terrestrial soi, 26 July 2014, F. Zhang. Living culture FA675.
Notes: Phylogenetically, Arthrobotrys weixiensis forms a sister lineage to A. globospora (99% MLBS, 1.00 BYPP). There are 13.2% (64/484 bp) differences between them in ITS. Morphologically, the conidia shape of A. weixiensis and A. globospora are similar. They can be distinguished by their conidia size. The conidia of A. weixiensis are significantly larger than those of A. globospora [A. weixiensis, 30.5–48 (36.7) × 14–25 (19.5) µm versus A. globospora, 25–37.5 (30) × 15–22.5 (18) µm]. In addition, the conidiophore of A. globospora bears only a single conidium, while the conidiophore of A. weixiensis bears 1–3 conidia [2,3].
Drechslerella pengdangensis F. Zhang & X.Y. Yang sp. nov. (Figure 4).
Index Fungorum number: IF900411; Facesoffungi number: FOF14153.
Etymology: The species name “pengdangensis” refers to the name of sample collection site: Pengdang County, Nujiang City, Yunnan Province, China.
Material examined: CHINA, Yunnan Province, Nujiang City, Pengdang County, N 27°56′16.88″, E 98°39′8.71″, from terrestrial soil, 4 May 2018, F. Zhang. Holotype CGMCC 3.24985, preserved in the China General Microbiological Culture Collection Center. Ex-type culture DLUCC 37-1, preserved in the Dali University Culture Collection.
Colonies on PDA: white, cottony, growing slowly, reaching 40 mm diameter after 15 days in the incubator at 26 °C. Mycelium: partly superficial, partly immersed, composed of septate, branched, smooth, and hyaline. Conidiophores: 195.5–355 µm ( x ¯ = 273.4 µm, n = 50) long, 2.5–5 µm ( x ¯ = 3.5 µm, n = 50) wide at the base, gradually tapering upwards to the apex 2.5–4 µm ( x ¯ = 2.4 µm, n = 50) wide, erect, septate, unbranched, and bearing a single conidium at the knob-like apex. Conidia: 30–45 × 17–27 µm ( x ¯ = 38 × 22.4 μm, n = 50), ellipsoidal to subfusiform, rounded at the apex, tapering towards narrow with truncate at the base, 1–2-septate (mostly 2-septate), hyaline, with the largest cell located at the middle or apex of the conidia, where the base cell is tiny. Chlamydospore: not observed. Nematodes were captured with constricting rings; in the non-constricted state, the outer diameter is 19–28.5 µm ( x ¯ = 24 µm, n = 50), and the inner diameter is 13–22.5 µm ( x ¯ = 20.1 µm, n = 50).
Additional specimen examined: CHINA, Yunnan Province, Nujiang City, Pengdang County, N 27°56′16.88″, E 98°39′8.71″, from terrestrial soil, 4 May 2018, F. Zhang. Living culture DL53.
Notes: Phylogenetically, Drechslerella pengdangensis forms a sister lineage with another new species (Drechslerella tianchiensis) reported in this study, with 89% MLBS support. There are 15% (128/853 bp) differences in ITS sequence between them. Morphologically, Dr. pengdangensis can be easily distinguished from Dr. tianchiensis in the shape of the conidia and single conidiophore. Dr. pengdangensis is similar to Dr. doedycoides in their ellipsoidal to sub-fusiform conidia and simple conidiophore with knob-like apex [2,3]. However, Dr. doedycoides produces 3-septate conidia, while Dr. pengdangensis never. Moreover, the base cell of conidia produced by Dr. pengdangensis is significantly smaller than those of Dr. Doedycoides [2,3].
Drechslerella tianchiensis F. Zhang & X.Y. Yang sp. nov. (Figure 5).
Index Fungorum number: IF900412; Facesoffungi number: FOF14154.
Etymology: The species name “tianchiensis” refers to the name of sample collection site: Tianchi Nature Reserve, Yunlong County, Dali City, Yunnan Province, China.
Material examined: CHINA, Yunnan Province, Dali City, Yunlong County, Tianchi Nature Reserve, N 25°51′22.50″, E 99°13′38.43″, from burned forest soil, 28 May 2018, F. Zhang. Holotype CGMCC 3.24986, preserved in the China General Microbiological Culture Collection Center. Ex-type culture DLUCC 38-1, preserved in the Dali University Culture Collection.
Colonies on PDA white, cottony, growing slowly, reaching 40 mm diameter after 15 days in the incubator at 26 °C. Mycelium partly superficial, partly immersed, composed of septate, branched, smooth, hyaline. Macroconidiophores 186.5–305.5 µm ( x ¯ = 248.1 µm, n = 50) long, 2.5–5 µm ( x ¯ = 3.6 µm, n = 50) wide at the base, gradually tapering upwards to the apex with 1.5–3 µm ( x ¯ = 2.2 µm, n = 50) wide, erect, septate, hyaline, unbranched or producing 1–2 short branches near the apex, each branch bearing a single conidium. Microconidiophores 137.5–245.5 µm ( x ¯ = 183.7 µm, n = 50) long, 2–4 µm ( x ¯ = 3.2 µm, n = 50) wide at the base, gradually tapering upwards to the apex with 1.5–3 µm ( x ¯ = 1.8 µm, n = 50) wide, erect, septate, hyaline, unbranched, producing 3–12 short denticles near the apex, each denticles bearing a single conidium. Conidia two types: Maroconidia 30–41 × 14.5–24 µm ( x ¯ = 36.2 × 18.7 μm, n = 50), ellipsoidal, rounded at the apex, tapering towards narrow with truncate base, 1–2-septate (mostly 2-septate), hyaline, with a largest cell located at the middle or apex of the conidia. Miroconidia 16–26.5 × 4.5–11.5 µm ( x ¯ = 21.6 × 6 μm, n = 50), clavate or cylindrical, rounded at the apex, tapering towards narrow with truncate base, 0–1-septate (mostly 1-septate), hyaline. Chlamydospore not observed. Capturing nematodes with constricting rings, in the non-constricted state, the outer diameter is 20.5–27.5 µm ( x ¯ = 24.7µm, n = 50), the inner diameter is 14.5–22 µm ( x ¯ = 19.3µm, n = 50).
Additional specimen examined: CHINA, Yunnan Province, Dali City, Yunlong County, Tianchi Nature Reserve, N 25°51′22.50″, E 99°13′38.43″, from burned forest soil, 28 May 2018, F. Zhang. Living culture XJ353.
Notes: Phylogenetically, Drechslerella tianchiensis formed a sister lineage with Dr. pengdangensis (89% MLBS). Morphologically, Dr. tianchiensis is similar to Dr. hainanensis and the asexual morph of Orbilia pseudopolybrocha in their shape of macroconidia and microconidia. The difference between Dr. tianchiensis and Orbilia pseudopolybrocha is that the macro-conidiophore of the latter is simple and bears a single conidium, while some macro-conidiophore of Dr. tianchiensis produces 1–2 short branches near the apex and bears 1–2 conidia. The conidia of Dr. tianchiensis are significantly larger than those of O. pseudopolybrocha (Dr. tianchiensis, 30–41 (36.2) × 14.5–24 (18.7) µm versus O. pseudopolybrocha, 26–30 × 16–22.2 µm) [33]. Dr. tianchiensis can be easily distinguished from Dr. hainanensis by its 1–2-branch macro-conidiophore and wider microconidia (Dr. tianchiensis, 16–26.5 (21.6) × 4.5–11.5 (6) µm versus Dr. hainanensis, 18.2–22.8 × 4.2–5.3 µm) [32].
Drechslerella yunlongensis F. Zhang & X.Y. Yang sp. nov. (Figure 6).
Index Fungorum number: IF900413; Facesoffungi number: FOF14155.
Etymology: The species name “yunlongensis” refers to the name of sample collection site: Yunlong County, Dali City, Yunnan Province, China.
Material examined: CHINA, Yunnan Province, Dali City, Yunlong County, N 25°52′27.91″, E 99°22′19″, from terrestrial soil, 3 June 2018, F. Zhang. Holotype CGMCC 3.20946, preserved in the China General Microbiological Culture Collection Center. Ex-type culture DLUCC 39-1, preserved in the Dali University Culture Collection.
Colonies on PDA: white, cottony, growing slowly, reaching 45 mm diameter after 15 days in the incubator at 26 °C. Mycelium: partly superficial, partly immersed, composed of septate, branched, smooth, and hyaline. Conidiophores: 164–331 µm ( x ¯ = 239.8 µm, n = 50) long, 2.5–5 µm ( x ¯ = 3.3 µm, n = 50) wide at the base, gradually tapering upwards to the apex 1.5–3µm ( x ¯ = 2.1 µm, n = 50) wide, erect, septate, unbranched, hyaline, bearing a single conidium at the apex. Conidia: 36–54 × 17–27 µm ( x ¯ = 47 × 23.6 μm, n = 50), drop-shaped or fusiform, rounded at the apex, tapering towards narrow with truncate base, 1–4-septate (mostly 4-septate), hyaline, with the largest cell located at the apex or middle of the conidia. Chlamydospore: 5–14 × 5.5–10 µm ( x ¯ = 8.7 ×7.1 μm, n = 50), cylindrical, globose or ellipsoidal, hyaline, and in chains when present. Nematodes were captured with constricting rings; in the non-constricted state, the outer diameter was 19.5–27 µm ( x ¯ = 23.1 µm, n = 50), the inner diameter was 15–21.5 µm ( x ¯ = 18.9µm, n = 50).
Additional specimen examined: CHINA, Yunnan Province, Dali City, Yunlong County, N 25°52′27.91″, E 99°22′19″, from terrestrial soil, 3 June 2018, F. Zhang. Living culture YL402.
Notes: The phylogenetic analysis clustered Drechslerella yunlongensis with the other four fusiform conidia-producing species (99% MLBS, 1.00 BYPP). Dr. yunlongensis was 9.8% (55/559 bp), 8.1% (40/496 bp), 9.1% (51/559 bp), and 7.9% (47/596 bp) different from Dr. aphrobrocha, Dr. bembicodes, Dr. coelobrocha, and Dr. xiaguanensis in ITS, respectively. Morphologically, Dr. yunlongensis is also similar to these four species. However, the conidia of Dr. yunlongensis are bigger than those of Dr. bembicodes and Dr. xiaguanensis (Dr. yunlongensis, 36–54 (47) × 17–27 (23.6) µm versus Dr. bembicodes, 36–43.2 (40) × 16.8–21.6 (20.5) µm versus Dr. xiaguanensis, 33–52 (42.5) × 9.5–28 (15.5) µm); moreover, Dr. bembicodes produces obovoid, 1-septate microconidia, while Dr. yunlongensis does not; the conidia of Dr. xiaguanensis are mostly 3-septate, while the conidia produced by Dr. yunlongensis are mostly 4-septate [2,3,42]. The difference between Dr. yunlongensis and Dr. aphrobrocha is that Dr. aphrobrocha produces mostly 3-septate conidia, while Dr. yunlongensis produces mostly 4-septate conidia; the conidia of Dr. yunlongensis are smaller than that of Dr. aphrobrocha due to its smaller apical cell (Dr. yunlongensis, 36–54 (47) × 17–27 (23.6) µm versus Dr. aphrobrocha, 40–57.5 (51) × 15.5–35 (24.6) µm) [2,3]. Dr. yunlongensis can be distinguished from Dr. coelobrocha by its wider conidia (Dr. yunlongensis, 17–27 (23.6) µm versus Dr. coelobrocha, 16.8–21.6 (19.8) µm), and shorter base and apical cells [2,3]. Furthermore, Dr. yunlongensis produces cylindrical or ellipsoidal chlamydospores, while none of the four closely related species produces chlamydospores [2,3,42].

3.3. Key to Known Species of Drechslerella

We do not update the species key of Arthrobotrys in this study because it has been updated in Zhang et al. [22], and no more new species have been reported except the two new species reported in this study. Super-cell in the species key refers to the cell in the conidia significantly larger than other cells.
  • 1. Conidia without super-cell…………………………………...………………………………2
  • 1. Conidia with a super-cell………………………………………………………….…….……5
  • 2. Conidia 1–3-septate…………………………………………………………………….……...3
  • 2. Conidia 0–1-septate…………………………………………………………………….…...…4
  • 3. 5–10 conidia cluster arrangement on a cluster of short denticles (5–10) at the apex of conidiophore, conidia 28.5–39.0 × 6.0–8.5 µm, microconidia cylindrical……………………………………………………………………………..O. tonghaiensis
  • 3. Conidiophore produce 3–8 short denticles by repeated elongation, conidia are cylindrical, botuliform, 20–45 (30) × 5–12.5 (6) µm, and do not produce microconidia…………………………………………………………………………….....Dr. brochapaga
  • 4. Conidia digitiform are mostly curved, 1-septate, 35–51.5 (42.1) × 6.5–8 (7.5) µm, with 3–13 conidia capitate arrangement at the apex of conidiophore…………..Dr. dactyleoids
  • 4. Conidia are elongated and ellipsoidal, straight, 0-1-septate, 7.8–12.9 × 3.3–4.2 µm………………………………………………………………..………….Dr. yunnanensis
  • 5. Conidia are sub-fusiform to fusiform……………………………………………………..…6
  • 5. Conidia are ellipsoidal, elongate ellipsoidal, subellipsoidal, or obovate……………….12
  • 6. Conidia are 1–2-septate…………………………………………………….....Dr. acrochaetum
  • 6. Conidia are 1–5-septate………………………………………………………………….…....7
  • 7. Conidia are 1–4-septate, mostly 3-septate……………………………………………….…..8
  • 7. Conidia are 1–5-septate, mostly 4-septate…………………………………………………10
  • 8. Conidia are smaller in size, 33–52 (42.5) × 9.5–28 (15.5) µm, swollen at both ends of cells………………….…………………………………………………..…..Dr. xiaguanensis
  • 8. Conidia are bigger, sometimes more than 52 µm in length and usually greater than 15 µm in width; the cells at both ends are not enlarged……………………………….…..9
  • 9. Conidia are wider, 40–57.5 (51) × 15.5–35 (24.6) µm, 2–4-septate, and conidiophore occasionally bear two conidia……………………………………....….…….Dr. aphrobrocha
  • 9. Conidia are narrower, 42.5–62.5 (47) × 15–22.5 (16.9) µm, 1–4-septate, sub-fusiform, and conidiophore bear a single conidium……………………………………..…Dr. inquisitor
  • 10. Conidia are 3–4-septate, smaller in size, 36–43.2 (40) × 16.8–21.6 (20.5) µm, producing obovoid, 1-septate microconidia………………………………………..….Dr. bembicodes
  • 10. Conidia are bigger, do not produce microconidia………………………………………11
  • 11. Conidia are 1–4-septate, 36–54 (47) × 17–27 (23.6) µm, producing cylindrical, globose, or ellipsoidal chlamydospore…………………………………………....Dr. yunlongensis
  • 11. Conidia are 2–5-septate, 45.6–55.2 (49.5) × 16.8–21.6 (19.8) µm, both ends cells are slender, and do not produce chlamydospore……………………………..Dr. coelobrocha
  • 12. Conidia are obovate and 1-septate…………………………………………………….….13
  • 12. Conidia are ellipsoidal, elongate ellipsoidal, and 0–3-septate………………………....14
  • 13. Conidia are obovate, 29–43 (35) × 15–19 (16.8) µm, base cells are pyramidal, with 3–8 conidia capitate arrangement at the apex of conidiophore….....................Dr. anchonia
  • 13. Conidia are obovate or sub-ellipsoidal, 35 × 24 µm, single conidium bear at the apex of conidiophore……………………………………………………………..…...Dr. polybrocha
  • 14. Conidiophore is branched or bears more than 1 conidium………………………….…15
  • 14. Conidiophore is unbranched, bears a single conidium……………………………..…..16
  • 15. Conidiophore is unbranched or produces 1–2 short branches near the apex, each branch bearing a single conidium, with conidia 30–41 (36.2) × 14.5–24 (18.7) µm, 1–2-septate………………………………………………………………...……Dr. tianchiensis
  • 15. Conidiophore is unbranched, bearing a loose head consisting of 2–12 conidia, with conidia 32.5–45 (38.9) × 17.5–25 (21.4) µm, 1–2-septate……………………..….Dr. effusa
  • 16. Conidiophore produces a swollen, knob-like apex………………………………..……17
  • 16. Conidiophore produces a truncated, non-swelling apex……………………………....20
  • 17. Produces cylindrical, clavate, or bottle-shaped, 1-septate microconidia……………...18
  • 17. Does not produce microconidia…………………………………………………………..19
  • 18. Macroconidia are bigger, 17.5–45 (34) × 17.5–25 (20.4) µm, 1–2-septate, mostly 1-septate, and microconidia are bigger, 23–40 (31.3)× 5–8 (6.8) µm……………………………………………………………………….....…Dr. heterospora
  • 18. Macroconidia are smaller, 26–30 × 16–22.2 µm, 0–2-septate, mostly 2-septate, and microconidia smaller, 14.7–23 × 3.3–6 µm…………………….………...O. pseudopolybrocha
  • 19. Conidia are bigger, 30–45 (38) × 17–27 (22.4) µm, 1–2-septate, and basal cells are tiny…………………………………………………………………...…...…Dr. pengdangensis
  • 19. Conidia are 25–52.5 (33.2) × 12.5–29 (17.3) µm, and 1–3-septate………….Dr. doedycoides
  • 20. Conidia are elongated and ellipsoidal, 1–3-septate, mostly 3-septate, 34–56.5 × 12.5–16.5 µm, and do not produce microconidia………………………………Dr. stenobrocha
  • 20. Conidia are ellipsoidal, 0–2-septate, and produce clavate or bottle-shaped microconidia……………………………………………………………………………………...21
  • 21. Macroconidia are thinner, 20–49.5 (38.5) × 8.5–15 (12) µm, 1–2-septate, mostly 2-septate, and microconidia wider, 6.5–22 (15.5) × 3.5–7 (5) µm……….……Dr. daliensis
  • 21. Macroconidia are 32.5–43 × 17–25 µm, 0–2-septate, mostly 1 or 2-septate, and microconidia are 18.2–22.8 × 4.2–5.3 µm…………………………..…..…………Dr. hainanensis

4. Discussion

Both the phylogenetic analysis in this study and previous studies divided NTF into two main clades based on the mechanisms by which they catch nematodes (the genus Drechslerella produces constricting rings to capture nematodes with mechanical force, and the genera Arthrobotrys and Dactylellina catch nematodes with adhesive traps) [11,12,13,14]. These results again emphasized the significance of trapping structure for species division and evolution. Different from previous studies, this study failed to cluster Dactylellina species into a stable cluster, possibly due to insufficient DNA data. We believe that as more DNA data are used, we will find more morphological or physiological features that match phylogenetic studies.
The evolution of nematode-trapping fungi (NTF) is one crucial node to understanding the history of fungal evolution because of its unique morphological characteristics and survival strategy [2,3,4,5]. Currently, the main focus of the evolution research on NTF is the evolution of the trapping structure [9,11,43]. However, on the one hand, the phylogenetic clade of Drechslerella in this study showed that some species with similar conidia morphology cluster stably into one branch, such as species in clade I producing fusiform conidia and species in clade II producing ellipsoidal conidia (Figure 1). Moreover, in the whole NTF, species that produce the same trapping structure can easily be divided into different groups according to their conidia. For example, Drechslerella species can be divided into two groups according to the presence or nonpresence of super-cell in their conidia, and all Arthrobotrys species can be divided into three groups according to their conidia shape [2]. In addition to the law above, as the most critical reproductive structure in the asexual generation of fungi, conidia should have crucial evolutionary significance in theory. Based on the above, conidia may also be an essential evolutionary feature for NTF and an important basis for the NTF classification. Similarly, are other structures or physiological characteristics of NTF experiencing the same problems as conidia (which have important evolutionary or taxonomic significances but have been neglected)? In conclusion, the evolution of organisms is a process of interaction between organisms and the environment. The evolution of a single structure (trapping structure) cannot represent the evolution of the NTF species. The excessive focus on the evolution of a single structure while ignoring the characteristics of the whole species may lead to the mistake of the blind man feeling the elephant.
The compilation logic of the key of Drechslerella species is that species are first roughly classified by those features that can be used to identify species and are easily distinguishable, such as whether the conidia produce a super-cell or not, the shape of the conidia (fusiform, elliptical, cylindrical, digitate, etc.), whether the conidiophore is branched or not, and the number of conidia on the conidiophore. Then, species are further classified by those features that can be used for species identification but require further measurement and observation, such as the detailed feature of macroconidia (number and position of the septum and the size of the macroconidia). Finally, morphologically similar species are distinguished by those characteristics that are uncertain whether they can be used for species identification but are differences between different species, such as the presence and features of microconidia, the detailed feature of the apex of the conidiophore, and the features of the chlamydospore. Even identifying Drechslerella species requires those morphological features that are not known to be valid, so how difficult would it be to identify the more complex Arthrobotrys and Dactylellina species based on these features alone? Therefore, follow-up research needs to systematically study all potential morphological characteristics to find more reliable characteristics for species identification.
Most of the sexual generations of Orbiliomycetes nematode-trapping fungi are members of Orbilia [3]. However, due to the morphological conservation of the sexual generations, there exists a phenomenon wherein one sexual species corresponds to several morphologically different asexual species [44]. Additionally, with the implementation of the one fungus, one name policy [45,46], asexual NTFs need to use sexual names when discovering their sexual generation (Orbilia sp.). This results in these different asexual species sharing the same sexual species name [44], which further leads to confusion in the classification system and relevant data in some databases (such as Genebank, https://www.ncbi.nlm.nih.gov/nuccore/?term=Orbilia+auricolor (accessed on 3 April 2023)). For this reason, we suggest that when reporting a pair of sexual and asexual species, it is necessary to discuss the difference between the sexual generation and known sexual species and, more importantly, consider the distinction between the asexual generation and known asexual generation. The naming of this pair of sexual and asexual species should be carefully evaluated separately, giving sexual and asexual generations different species names if necessary.

Supplementary Materials

The following supporting information can be downloaded at https://www.mdpi.com/article/10.3390/jof9070735/s1, Table S1: GenBank accession numbers involved in this study. Ex-type strains are in bold. The newly generated sequences are indicated in blue. Figure S1: Bayesian majority rule consensus tree based on a combined ITS, TEF and RPB2 sequence data from 87 species of Orbiliaceae nematode-trapping fungi. Bayesian posterior probabilities values equal or greater than 0.90 are indicated above the nodes. The new isolates are in blue, type strains are in bold. The tree is rooted by Vermispora fusarina YXJ02-13-5 and V. leguminacea AS 6.0291.

Author Contributions

X.-Y.Y. and W.X. conceived and designed the study. F.Z., Y.-Q.Y. and F.-P.Z. conducted the experiments. F.Z. wrote the manuscript. S.B. and X.-Y.Y. revised the manuscript. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by the Second Tibetan Plateau Scientific Expedition and Research Program (STEP), grant number 2019QZKK0402.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

The data that support the finding of this study are contained within the article.

Acknowledgments

We are sincerely grateful to Yu Ze-Fen from Yunnan University for all her help and suggestions during the writing process.

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Swe, A.; Li, J.; Zhang, K.Q.; Pointing, S.B.; Jeewon, R.; Hyde, K.D. Nematode-trapping fungi. Curr. Res. Environ. Appl. Mycol. 2011, 1, 1–26. [Google Scholar]
  2. Zhang, K.Q.; Mo, M.H. Flora Fungorum Sinicorum: Arthrobotrys et Gengra Cetera Cognata; Science Press: Beijing, China, 2006; Volume 33. [Google Scholar]
  3. Zhang, K.Q.; Hyde, K.D. Nematode-Trapping Fungi; Springer Science & Business: Berlin/Heidelberg, Germany, 2014. [Google Scholar] [CrossRef]
  4. Corda, A.K.J. Pracht-Flora Europaeischer Schimmelbildungen; G. Fleischer: Leipzig, Germany, 1839; p. 43. [Google Scholar]
  5. Drechsler, C. Morphological features of some more fungi that capture and kill nematode. J. Wash. Acad. Sci. 1933, 23, 267–270. [Google Scholar]
  6. Wang, X.; Li, G.H.; Zou, C.G.; Ji, X.L.; Liu, T.; Zhao, P.J.; Liang, L.M.; Xu, J.P.; An, Z.Q.; Zheng, X.; et al. Bacteria can mobilize nematode-trapping fungi to kill nematodes. Nat. Commun. 2014, 5, 5776. [Google Scholar] [CrossRef] [Green Version]
  7. Yang, Y.Q.; Zhang, F.; Li, Z.Q.; Zhou, F.P.; Yang, X.Y.; Xiao, W. Morphological and multigene phylogenetic analyses reveal two new nematode-trapping fungi (Arthrobotrys, Orbiliaceae) from Yunnan, China. Phytotaxa 2023, 591, 263–272. [Google Scholar] [CrossRef]
  8. Zopf, W.F. Zur Kenntniss der Infections-Krankheiten niederer Thiere und Pflanzen. Acad. Nat. 1888, 52, 314–376. [Google Scholar]
  9. Li, T.F.; Zhang, K.Q.; Liu, X.Z. Taxonomy of Nematophagous Fungi; Chinese Scientific and Technological Publications: Beijing, China, 2000. [Google Scholar]
  10. Yang, E.; Xu, L.; Yang, Y.; Zhang, X.; Xiang, M.; Wang, C.; An, Z.Q.; Liu, X.Z. Origin and evolution of carnivorism in the Ascomycota (fungi). Proc. Natl. Acad. Sci. USA 2012, 109, 10960–10965. [Google Scholar] [CrossRef]
  11. Ahrén, D.; Ursing, B.M.; Tunlid, A. Phylogeny of nematode-trapping fungi based on 18S rDNA sequences. FEMS Microbiol. Lett. 1998, 158, 179–184. [Google Scholar] [CrossRef]
  12. Pfister, D.H. Castor, Pollux and life histories of fungi. Mycologia 1997, 89, 1–23. [Google Scholar] [CrossRef]
  13. Scholler, M.; Hagedorn, G.; Rubner, A. A reevaluation of predatory orbiliaceous fungi. II. A new generic concept. Sydowia 1999, 51, 89–113. [Google Scholar]
  14. Yang, Y.; Yang, E.; An, Z.; Liu, X.Z. Evolution of nematode-trapping cells of predatory fungi of the Orbiliaceae based on evidence from rRNA-encoding DNA and multiprotein sequences. Proc. Natl. Acad. Sci. USA 2007, 104, 8379–8384. [Google Scholar] [CrossRef]
  15. Chen, J.; Xu, L.L.; Liu, B.; Liu, X.Z. Taxonomy of Dactylella complex and Vermispora. I. Generic concepts based on morphology and ITS sequences data. Fungal Divers. 2007, 26, 73–83. [Google Scholar]
  16. Cooke, R.C.; Dickinson, C.H. Nematode-trapping species of Dactylella and Monacrosporium. Trans. Br. Mycol. Soc. 1965, 48, 621–629. [Google Scholar] [CrossRef]
  17. Schenck, S.; Kendrick, W.B.; Pramer, D. A new nematode-trapping hyphomycete and a reevaluation of Dactylaria and Arthrobotrys. Can. J. Bot. 1977, 55, 977–985. [Google Scholar] [CrossRef]
  18. Júnior, A.D.; Ferreira, V.M.; de Carvalho, L.M.; Álvares, F.B.V.; Vilela, V.L.R.; Ferraz, C.M.; Veloso, F.B.R.; Lima, T.F.; Braga, F.R.; de Araújo, J.V. Association of the nematophagous fungi Arthrobotrys musiformis and Monacrosporium sinense in vitro and in vivo for biological control of equine cyathostomins. Braz. J. Vet. Med. 2021, 43, e003021. [Google Scholar] [CrossRef]
  19. Soliman, M.S.; El-Deriny, M.M.; Ibrahim, D.S.S.; Zakaria, H.; Ahmed, Y. Suppression of root-knot nematode Meloidogyne incognita on tomato plants using the nematode trapping fungus Arthrobotrys oligospora Fresenius. J. Appl. Microbiol. 2021, 131, 2402–2415. [Google Scholar] [CrossRef]
  20. Subramanian, C.V. Dactylella, Monacrosporium and Dactylina. J. Indian Bot. Soc. 1963, 42, 291–300. [Google Scholar]
  21. Liu, X.Z.; Zhang, K.Q. Nematode-trapping species of Monacrosporium with special reference to two new species. Mycol. Res. 1994, 98, 862–868. [Google Scholar] [CrossRef]
  22. Zhang, F.; Boonmee, S.; Bhat, J.D.; Xiao, W.; Yang, X.Y. New Arthrobotrys Nematode-Trapping Species (Orbiliaceae) from Terrestrial Soils and Freshwater Sediments in China. J. Fungi 2022, 8, 671. [Google Scholar] [CrossRef]
  23. Drechsler, C. Predacious fungi. Biol. Rev. Camb. Philos. Soc. 1941, 16, 265–290. [Google Scholar] [CrossRef]
  24. Duddington, C.L. Notes on the technique of handling predacious fungi. Trans. Brit. Mycol. Soc. 1955, 38, 97–103. [Google Scholar] [CrossRef]
  25. Eren, J.; Pramer, D. The most probable number of nematode-trapping fungi in soil. Soil Sci. 1965, 99, 285. [Google Scholar] [CrossRef]
  26. Gao, R.H.; Lei, L.P.; Liu, X.Z. A simple method for inducing and observing predacious devices of nematode-trapping fungi. Acta Mycol. Sin. 1996, 4, 304–305+326. [Google Scholar] [CrossRef]
  27. White, T.J.; Bruns, T.; Lee, S.; Taylor, J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protoc. A Guide Methods Appl. 1990, 18, 315–322. [Google Scholar]
  28. O’Donnell, K.; Kistler, H.C.; Cigelnik, E.; Ploetz, R.C. Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies. Proc. Natl. Acad. Sci. USA 1998, 95, 2044–2049. [Google Scholar] [CrossRef] [PubMed]
  29. Liu, Y.J.; Whelen, S.; Hall, B.D. Phylogenetic relationships among ascomycetes: Evidence from an RNA polymerse II subunit. Mol. Biol. Evol. 1999, 16, 1799–1808. [Google Scholar] [CrossRef] [Green Version]
  30. Swindell, S.R.; Plasterer, T.N. Seqman. In Sequence Data Analysis Guidebook; Swindell, S.R., Ed.; Springer: Totowa, NJ, USA, 1997; pp. 75–89. [Google Scholar] [CrossRef]
  31. Li, J.; Qian, W.; Qiao, M.; Bai, Y.; Yu, Z.F. A new Drechslerella species from Hainan, China. Mycotaxon 2013, 125, 183–188. [Google Scholar] [CrossRef]
  32. Zhang, Y.; Qiao, M.; Baral, H.O.; Xu, J.; Zhang, K.Q.; Yu, Z.F. Morphological and molecular characterization of Orbilia pseudopolybrocha and O. tonghaiensis, two new species of Orbiliaceae from China. Int. J. Syst. Evol. Microbiol. 2020, 70, 2664–2676. [Google Scholar] [CrossRef]
  33. Zhang, X.; Zhang, F.; Jiang, L.; Yang, Y.Q.; Yang, X.Y.; Xiao, W. Two new nematode-trapping fungi (Arthrobotrys, Orbiliaceae) from Yunnan, China. Phytotaxa 2022, 568, 255–266. [Google Scholar] [CrossRef]
  34. Katoh, K.; Standley, D.M. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability. Mol. Biol. Evol. 2013, 30, 772–780. Available online: http://mafft.cbrc.jp/alignment/server (accessed on 15 March 2023). [CrossRef] [Green Version]
  35. Hall, T.A. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41, 95–98. [Google Scholar]
  36. Tamura, K.; Stecher, G.; Peterson, D.; Filipski, A.; Kumar, S. MEGA6: Molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 2013, 30, 2725–2729. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  37. Posada, D. jModelTest: Phylogenetic model averaging. Mol. Biol. Evol. 2008, 25, 1253–1256. [Google Scholar] [CrossRef] [PubMed]
  38. Felsenstein, J. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 1985, 39, 783–791. [Google Scholar] [CrossRef] [PubMed]
  39. Huelsenbeck, J.P.; Ronquist, F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001, 17, 754–755. [Google Scholar] [CrossRef] [Green Version]
  40. Rambaut, A. FigTree v1. 3.1. 2010. Available online: http://tree.bio.ed.ac.uk/software/figtree/ (accessed on 7 May 2020).
  41. tropical nematode-trapping fungus from Puerto Rico, supported by morphology and molecular phylogenetics. Willdenowia 2020, 50, 241–251. [CrossRef]
  42. Zhang, F.; Boonmee, S.; Monkai, J.; Yang, X.Y.; Xiao, W. Drechslerella daliensis and D. xiaguanensis (Orbiliales, Orbiliaceae), two new nematode-trapping fungi from Yunnan, China. Biodivers. Data J. 2022, 10, e96642. [Google Scholar] [CrossRef]
  43. Li, Y.; Hyde, K.D.; Jeewon, R.; Cai, L.; Vijaykrishna, D.; Zhang, K. Phylogenetics and evolution of nematode-trapping fungi (Orbiliales) estimated from nuclear and protein coding genes. Mycologia 2005, 97, 1034–1046. [Google Scholar] [CrossRef]
  44. Mo, M.; Huang, X.; Zhou, W.; Huang, Y.; Hao, Y.E.; Zhang, K.Q. Arthrobotrys yunnanensis sp. nov., the fourth anamorph of Orbilia auricolor. Fungal Divers. 2005, 18, 107–115. [Google Scholar]
  45. Norvell, L.L. Fungal nomenclature. 1. Melbourne approves a new Code. Mycotaxon 2011, 116, 481–490. [Google Scholar] [CrossRef] [Green Version]
  46. Wingfield, M.J.; De Beer, Z.W.; Slippers, B.; Wingfield, B.D.; Groenewald, J.Z.; Lombard, L.; Crous, P.W. One fungus, one name promotes progressive plant pathology. Mol. Plant Pathol. 2012, 13, 604–613. [Google Scholar] [CrossRef]
Figure 1. Maximum likelihood tree based on a combined ITS, TEF and RPB2 sequence from 87 species of Orbiliaceae nematode-trapping fungi. Bootstrap support values equal to or greater than 70% are indicated above the nodes. The new isolates are in blue; type strains are in bold. The tree is rooted by Vermispora fusarina YXJ02-13-5 and V. leguminacea AS 6.0291.
Figure 1. Maximum likelihood tree based on a combined ITS, TEF and RPB2 sequence from 87 species of Orbiliaceae nematode-trapping fungi. Bootstrap support values equal to or greater than 70% are indicated above the nodes. The new isolates are in blue; type strains are in bold. The tree is rooted by Vermispora fusarina YXJ02-13-5 and V. leguminacea AS 6.0291.
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Figure 2. Arthrobotrys hengjiangensis (CGMCC 3.24983). (a) Colony. (b,c) Conidia. (e) Chlamydospores. (f) Trapping structure: adhesive networks. (d,g) Conidiophores. Scale bars: (a) = 1 cm, (b,c,e,f) = 10 µm, (d,g) = 20 µm.
Figure 2. Arthrobotrys hengjiangensis (CGMCC 3.24983). (a) Colony. (b,c) Conidia. (e) Chlamydospores. (f) Trapping structure: adhesive networks. (d,g) Conidiophores. Scale bars: (a) = 1 cm, (b,c,e,f) = 10 µm, (d,g) = 20 µm.
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Figure 3. Arthrobotrys weixiensis. (CGMCC 3.24984). (a) Colony. (b,c) Conidia. (d) Chlamydospores. (e) Trapping structure: adhesive networks. (f) Conidiophores. Scale bars: (a) = 1 cm, (be) = 10 μm, (f) = 20 μm.
Figure 3. Arthrobotrys weixiensis. (CGMCC 3.24984). (a) Colony. (b,c) Conidia. (d) Chlamydospores. (e) Trapping structure: adhesive networks. (f) Conidiophores. Scale bars: (a) = 1 cm, (be) = 10 μm, (f) = 20 μm.
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Figure 4. Drechslerella pengdangensis (CGMCC 3.24985). (a) Colony. (b,c) Conidia. (d) Trapping structure: constricting rings. (e) Conidiophores. Scale bars: (a) = 1 cm, (bd) = 10 µm, (e) = 20 µm.
Figure 4. Drechslerella pengdangensis (CGMCC 3.24985). (a) Colony. (b,c) Conidia. (d) Trapping structure: constricting rings. (e) Conidiophores. Scale bars: (a) = 1 cm, (bd) = 10 µm, (e) = 20 µm.
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Figure 5. Drechslerella tianchiensis (CGMCC 3.24986). (a) Colony. (b) Microconidia. (c) Macroconidia. (d) Trapping structure: constricting rings. (e) Microconidiophores. (f) Macroconidiophores. Scale bars: (a) = 1 cm, (bd) = 10 µm, (e,f) = 20 µm.
Figure 5. Drechslerella tianchiensis (CGMCC 3.24986). (a) Colony. (b) Microconidia. (c) Macroconidia. (d) Trapping structure: constricting rings. (e) Microconidiophores. (f) Macroconidiophores. Scale bars: (a) = 1 cm, (bd) = 10 µm, (e,f) = 20 µm.
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Figure 6. Drechslerella yunlongensis (CGMCC 3.20946). (a) Colony. (b,c) Conidia. (d) Germinating conidia. (e) Trapping structure: constricting rings. (f) Chlamydospores. (g) Conidiophores. Scale bars: (a) = 1 cm, (bd) = 10 µm, (e,f) = 20 µm.
Figure 6. Drechslerella yunlongensis (CGMCC 3.20946). (a) Colony. (b,c) Conidia. (d) Germinating conidia. (e) Trapping structure: constricting rings. (f) Chlamydospores. (g) Conidiophores. Scale bars: (a) = 1 cm, (bd) = 10 µm, (e,f) = 20 µm.
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Zhang, F.; Yang, Y.-Q.; Zhou, F.-P.; Xiao, W.; Boonmee, S.; Yang, X.-Y. Morphological and Phylogenetic Characterization of Five Novel Nematode-Trapping Fungi (Orbiliomycetes) from Yunnan, China. J. Fungi 2023, 9, 735. https://doi.org/10.3390/jof9070735

AMA Style

Zhang F, Yang Y-Q, Zhou F-P, Xiao W, Boonmee S, Yang X-Y. Morphological and Phylogenetic Characterization of Five Novel Nematode-Trapping Fungi (Orbiliomycetes) from Yunnan, China. Journal of Fungi. 2023; 9(7):735. https://doi.org/10.3390/jof9070735

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Zhang, Fa, Yao-Quan Yang, Fa-Ping Zhou, Wen Xiao, Saranyaphat Boonmee, and Xiao-Yan Yang. 2023. "Morphological and Phylogenetic Characterization of Five Novel Nematode-Trapping Fungi (Orbiliomycetes) from Yunnan, China" Journal of Fungi 9, no. 7: 735. https://doi.org/10.3390/jof9070735

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