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Proceeding Paper

The Development of a Dust Mineralogy Map from Satellite Retrievals and Implementation in WRF-Chem †

1
Academy of Athens, Research Centre for Atmospheric Physics and Climatology, 10679 Athens, Greece
2
IAASARS, National Observatory of Athens, 15236 Athens, Greece
3
Department of Geography, Harokopion University of Athens (HUA), 17671 Athens, Greece
4
South East European Virtual Climate Change Center, 11000 Belgrade, Serbia
5
Environmental Chemical Processes Laboratory, Department of Chemistry, University of Crete, 70013 Heraklion, Greece
6
Institute of Environmental Physics, University of Bremen, D-28359 Bremen, Germany
7
Institute for Environmental Research and Sustainable Development, National Observatory of Athens, Palaia Penteli, 15236 Athens, Greece
*
Author to whom correspondence should be addressed.
Presented at the 16th International Conference on Meteorology, Climatology and Atmospheric Physics—COMECAP 2023, Athens, Greece, 25–29 September 2023.
Environ. Sci. Proc. 2023, 26(1), 54; https://doi.org/10.3390/environsciproc2023026054
Published: 25 August 2023

Abstract

:
Mineral dust particles are key ingredients of the atmosphere. They interact in atmospheric physics and chemistry and have important implications for human health. Therefore, it is important to examine the properties of these aerosols, including their ambient concentrations, size distributions, shape and mineral composition. In this work, we use satellite remote sensing from Sentinel 2A and EMIT missions to derive the mineralogical composition of surface areas, and we describe the development of a new module to represent the atmospheric life cycle of individual dust minerals in WRF-Chem. In the first step, the GMINER30 mineralogical database is implemented in WRF-Chem to describe the emission, transport, dry and wet deposition of different mineral types.

1. Introduction

A broad spectrum of environmental processes, such as radiation, cloud formation and ocean fertilization, and human health are affected by the presence of mineral dust. The transport of dust particles is dictated by the prevailing meteorological conditions, as well as the composition and physiochemical properties of the particles themselves. The latter factors are determined by the soil mineralogy in the source region. To develop a more refined mineralogical categorization that can significantly improve the dust transport estimations from numerical models and prepare for their implications on weather, biogeochemistry and health, we have worked to achieve two goals: (i) derive a finer mineralogical partition of the source regions through the utilization of high-resolution multi-spectral (Sentinel 2) [1] and hyperspectral (EMIT-NASA) EO datasets [2]; (ii) implement the existing GMINER30 mineralogical database [3] in the WRF-CHEM model and perform sensitivity tests.

2. Methodology and Results

2.1. Mineralogy from Multispectral (Sentinel 2A) and Hyperspectral (EMIT) Satellite Retrievals

The broader area of Lake Chad in Africa was our selected test-bed for the calculation of mineralogical abundances. Satellite estimates were derived for specific dates in Spring and Autumn in order to efficiently exclude areas of dense vegetation (NDVI > 0.3) and identify a number of minerals via spectral indices. The reference spectrum of minerals related to dust was derived from the USGS Spectral Library v7 [4] and analyzed for signature reflectivity characteristics in specific wavelengths, upon which a number of custom band ratios were created. From Sentinel 2 estimates, Alteration, Ferric Oxides and All Iron were calculated (as both Plagioclase and Orthoclase in the Feldspar group are featureless in the specific bands). As the number of bands in the Sentinel 2A estimates are limiting to identifying individual minerals, an approach of calculating mineralogical categories was preferred instead. Ferric Oxides includes minerals such as Hematite, Goethite and Jarosite, whereas All Iron includes both ferrous as well as ferric oxides of iron. The Alteration index defines areas that are rich in clay content. These three categories can be seen in Figure 1.
On the other hand, the 285 narrow spectral bands of EMIT reflectance products allow a significantly more refined partition in the identification of specific minerals, as presented in Figure 2. The Level 2a product that is currently available provides surface reflectance, which is derived by screening clouds and correcting for atmospheric effects. By utilising the L2A estimates and resorting to the aforementioned custom band ratios in Table 1, we identified a number of minerals that relate to the dust particle uptake. In 2023, the Level 2b product is expected to offer mineralogy data derived from fitting reflectance spectra after screening for non-mineralogical components, so we could input these categories into a global Numerical Weather Prediction (NWP) model.

2.2. Implementation of GMINER30 Database in WRF-Chem

Τo represent atmospheric transport as well as the dry and wet deposition mechanisms of the different mineral components of desert dust, we developed a dust mineralogy module in the framework of the WRF-Chem regional model [5], which we updated with the MODIS-NDVI active dust sources definition, as described in [6]. In order to achieve this, we implemented the global 30sec GMINER30 high-resolution mineralogical gridded database of dust-productive soils for atmospheric dust modeling [3]. This dataset includes a mean global distribution of the soil mineral composition and is appropriate for implementation in global and regional numerical studies. The distribution of the effective mineral content in soil in percentages is given for quartz, illite, kaolinite, smectite, feldspar, calcite, hematite and gypsum. The mineral fraction is weighted in terms of the clay and silt content in the soil. To derive the mass size distribution for each emitted mineral, we followed the process described in [7], where, for the normalized mass size distribution for each emitted mineral, we assumed that aggregates are homogeneous mixtures of minerals with similar fragmentation properties. The modeled surface mineralogical composition is shown in Figure 3, as obtained via the implementation of GMINER30 in WRF-Chem. Important spatial variability is evident for most minerals, such as kaolinite and quartz, throughout the Saharan and Arabian deserts, which is in accordance with earlier studies [3]. The developed module is able to handle various datasets with minimal tampering, and therefore, additional mineralogical databases from satellite missions (e.g., Sentinel 2 and EMIT) will be used as inputs in the model as soon as they become available. As an example, the partitioning of total dust to specific elements (in this case, quartz) is shown in Figure 4. As shown in this plot, the variability of quartz particles for a typical desert dust episode depends on both the atmospheric circulation and the surface mineralogy.

3. Conclusions and Future Plans

The more detailed mineralogical mapping of dust uptake areas can greatly benefit atmospheric dust transport estimates from NWP models. Multispectral estimates such as those form Sentinel 2 can provide broad mineralogical categories instead of individual minerals due to their limited bands, but offer global coverage and open data access. Hyperspectral estimates allow the fine identification of particular minerals to be made. Current products, such as EMIT from NASA, also offer a formerly missing strength, which is extensive coverage and data availability. The necessary developments to include detailed mineralogical databases in the atmospheric model have been completed and tested using existing mineralogical databases. The next steps include the performance of sensitivity tests and model–data intercomparisons with WRF-Chem to investigate the impacts of different minerals in atmospheric processes and human health. Additionally, spectral unmixing techniques will be used to derive the more refined identification of minerals from satellite retrievals.

Author Contributions

S.S. supervision, conceptualization and writing, C.S. methodology and writing, N.S.B. satellite data, O.S. review and editing, V.A. review and editing, A.G. data, review and editing, E.M. review and editing, P.K. review and editing, K.T. review and editing, G.P. review and editing, B.C. review and editing, S.N. data, review and editing, N.K. data, review and editing, M.K. data, review and editing, N.M. data, review and editing, C.Z. supervision, review and editing. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by the Hellenic Foundation for Research and Innovation project MegDeth (HFRI no. 703).

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

All data are available upon request.

Acknowledgments

We acknowledge the Earth Surface Mineral Dust Source Investigation (EMIT) NASA Mission and the Copernicus Sentinel 2A ESA mission for the hyperspectral and multispectral satellite data used in this study.

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Copernicus Sentinel Data [2022]. Data Retrieved from Copernicus Open Access Hub, Processed by ESA. Available online: https://scihub.copernicus.eu/ (accessed on 25 March 2023).
  2. Green, R.O.; Mahowald, N.; Ung, C.; Thompson, D.R.; Bator, L.; Bennet, M.; Bernas, M.; Blackway, N.; Bradley, C.; Cha, J.; et al. The Earth Surface Mineral Dust Source Investigation: An Earth Science Imaging Spectroscopy Mission. In Proceedings of the 2020 IEEE Aerospace Conference, Big Sky, MT, USA, 7–14 March 2020; pp. 1–15. [Google Scholar] [CrossRef]
  3. Nickovic, S.; Vukovic, A.; Vujadinovic, M.; Djurdjevic, V.; Pejanovic, G. Technical Note: High-resolution mineralogical database of dust-productive soils for atmospheric dust modeling. Atmos. Chem. Phys. 2012, 12, 845–855. [Google Scholar] [CrossRef]
  4. Kokaly, R.F.; Clark, R.N.; Swayze, G.A.; Livo, K.E.; Hoefen, T.M.; Pearson, N.C.; Wise, R.A.; Benzel, W.M.; Lowers, H.A.; Driscoll, R.L.; et al. USGS Spectral Library Version 7: U.S. Geological Survey Data Series 1035; United States Geological Survey (USGS): Reston, VA, USA, 2017; 61p. [Google Scholar] [CrossRef]
  5. Jones, S.L.; Adams-Selin, R.; Hunt, E.D.; Creighton, G.A.; Cetola, J.D. Update on modifications to WRF-CHEM GOCART for fine-scale dust forecasting at AFWA. In Proceedings of the AGU Fall Meeting, New Orleans, LA, USA, 11–15 December 2012. [Google Scholar]
  6. Spyrou, C.; Solomos, S.; Bartsotas, N.S.; Douvis, K.C.; Nickovic, S. Development of a Dust Source Map for WRF-Chem Model Based on MODIS NDVI. Atmosphere 2022, 13, 868. [Google Scholar] [CrossRef]
  7. Gonçalves Ageitos, M.; Obiso, V.; Miller, R.L.; Jorba, O.; Klose, M.; Dawson, M.; Balkanski, Y.; Perlwitz, J.; Basart, S.; Di Tomaso, E.; et al. Modeling dust mineralogical composition: Sensitivity to soil mineralogy atlases and their expected climate impacts. EGUsphere 2023. preprint. [Google Scholar] [CrossRef]
Figure 1. Alteration, Ferric Oxides and All Iron Oxides, as calculated using Sentinel data. Black color indicates no identification and red color indicates high identification of each mineral.
Figure 1. Alteration, Ferric Oxides and All Iron Oxides, as calculated using Sentinel data. Black color indicates no identification and red color indicates high identification of each mineral.
Environsciproc 26 00054 g001
Figure 2. Calcite, Feldspar, Hematite, Clays, Smectite, Kaolinite, Ilite, Gypsum and Phosphorus, as identified from the custom band ratios from EMIT. Black color indicates no identification and red color indicates high identification of each mineral.
Figure 2. Calcite, Feldspar, Hematite, Clays, Smectite, Kaolinite, Ilite, Gypsum and Phosphorus, as identified from the custom band ratios from EMIT. Black color indicates no identification and red color indicates high identification of each mineral.
Environsciproc 26 00054 g002
Figure 3. Percentage distribution of the effective mineral contents in soil for (a) iron, (b) feldspars, (c) kaolinite and (d) quartz.
Figure 3. Percentage distribution of the effective mineral contents in soil for (a) iron, (b) feldspars, (c) kaolinite and (d) quartz.
Environsciproc 26 00054 g003
Figure 4. Desert dust concentration at the surface (a) and the corresponding quartz mineral concentration (b).
Figure 4. Desert dust concentration at the surface (a) and the corresponding quartz mineral concentration (b).
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Table 1. Custom spectral indices for EMIT.
Table 1. Custom spectral indices for EMIT.
NameChemical FormulaRatio in Wavelengths (nm)Band Ratio
Feldspar (plagioclase anorthite-albite)Albite (NaAlSi3O8)—anorthite CaAl2Si2O81700/1300178/124
Clays (illite, montmorillonite, kaolinite)Al9FFeHK3MgO41Si14+8, Al2H2O12Si4, Al2Si2O 5(OH)41700/2200178/245
Illite(K,H3O)(Al,Mg,Fe)2(Si,Al)4O10[(OH)2,(H2O)]1700/2300178/259
Montmorillonite (smectite)(Na,Ca)0.33(Al,Mg)2(Si4O10)(OH)2·nH2O1700/2056178/226
KaoliniteAl2Si2O5(OH)4, or in oxide notation: Al2O3·2SiO2·2H2O1700/2160178/240
CalciteCaCO31700/2330178/263
HematiteFe2O3 745.37/53050/21
GypsumCaSO4·2H2O1670/1751.8174/185
Phosphorus (apatite)Ca5(PO4)3(F,Cl,OH)768/797.8953/57
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MDPI and ACS Style

Solomos, S.; Spyrou, C.; Bartsotas, N.S.; Sykioti, O.; Amiridis, V.; Gkikas, A.; Marinou, E.; Katsafados, P.; Tsarpalis, K.; Pejanovic, G.; et al. The Development of a Dust Mineralogy Map from Satellite Retrievals and Implementation in WRF-Chem. Environ. Sci. Proc. 2023, 26, 54. https://doi.org/10.3390/environsciproc2023026054

AMA Style

Solomos S, Spyrou C, Bartsotas NS, Sykioti O, Amiridis V, Gkikas A, Marinou E, Katsafados P, Tsarpalis K, Pejanovic G, et al. The Development of a Dust Mineralogy Map from Satellite Retrievals and Implementation in WRF-Chem. Environmental Sciences Proceedings. 2023; 26(1):54. https://doi.org/10.3390/environsciproc2023026054

Chicago/Turabian Style

Solomos, Stavros, Christos Spyrou, Nikolaos S. Bartsotas, Olga Sykioti, Vassilis Amiridis, Antonios Gkikas, Eleni Marinou, Petros Katsafados, Konstantinos Tsarpalis, Goran Pejanovic, and et al. 2023. "The Development of a Dust Mineralogy Map from Satellite Retrievals and Implementation in WRF-Chem" Environmental Sciences Proceedings 26, no. 1: 54. https://doi.org/10.3390/environsciproc2023026054

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