Role of Gene Conversion in the Evolution of Sex Chromosomes

A special issue of Genes (ISSN 2073-4425). This special issue belongs to the section "Population and Evolutionary Genetics and Genomics".

Deadline for manuscript submissions: closed (15 November 2020) | Viewed by 3120

Special Issue Editor


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Guest Editor
Department of Biology and Biotechnology “Charles Darwin”, Sapienza – University of Rome, Piazzale A. Moro 5 00185 Rome, Italy
Interests: Y chromosome phylogeography, sex chromosome evolution, molecular evolution, human genomic diversity, population genetics; human evolutionary genetics, gene conversion,

Special Issue Information

Dear Colleagues,

In many dioecious organisms, sex chromosomes are heteromorphic and participate in sex determination. Sex chromosomes evolved independently in many groups belonging to different kingdoms and it has been hypothesized that their evolution is characterized by few preserved evolutionary steps. They originated from a single pair of ancestral recombining autosomes that began to differentiate due to the suppression of meiotic recombination between them. As a consequence, the evolution of the heterogametic sex-specific chromosome has been characterized by its rapid structural decay and the loss of most of its ancestral genes. Thus, it has long been considered a recombinationally inert genomic element. This view has been recently dismissed by the discovery that the sequence landscape of sex chromosomes can be modulated by abundant inter-and intra- chromosomal gene conversion (GC): a type of recombination which, unlike crossing-over, involves the non-reciprocal transfer of genetic information from a “donor” sequence to a highly similar “acceptor” and seems essential to maintain the structural integrity of the genome.

Despite its importance in diseases (e.g. infertility) and evolution, the study of the dynamics of GC in the evolution of sex chromosomes is still in its infancy, mainly because of the complexity of analysis, due to the high sequence similarity of the interacting paralogs.

This special issue will collect reviews and original research articles concerning the role of GC in the evolution of sex chromosomes in all known chromosomal sex-determination systems, focusing on the analysis of genetic diversity, but also on how both intra- and inter-chromosomal gene conversion is an indispensable ubiquitous mechanism for maintaining sex chromosome structures.

Sincerely

Prof. Beniamino Trombetta
Guest Editor

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Keywords

  • XY, ZW and other genetic sex determination systems
  • Sex chromosome evolution
  • Gene conversion
  • Genetic diversity of sex chromosomes
  • Structural integrity of sex chromosomes
  • Infertility

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Published Papers (1 paper)

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Research

12 pages, 16984 KiB  
Article
Sequence Transpositions Restore Genes on the Highly Degenerated W Chromosomes of Songbirds
by Luohao Xu, Martin Irestedt and Qi Zhou
Genes 2020, 11(11), 1267; https://doi.org/10.3390/genes11111267 - 28 Oct 2020
Cited by 5 | Viewed by 2782
Abstract
The female-specific W chromosomes of most Neognathae birds are highly degenerated and gene-poor. Previous studies have demonstrated that the gene repertoires of the Neognathae bird W chromosomes, despite being in small numbers, are conserved across bird species, likely due to purifying selection maintaining [...] Read more.
The female-specific W chromosomes of most Neognathae birds are highly degenerated and gene-poor. Previous studies have demonstrated that the gene repertoires of the Neognathae bird W chromosomes, despite being in small numbers, are conserved across bird species, likely due to purifying selection maintaining the regulatory and dosage-sensitive genes. Here we report the discovery of DNA-based sequence duplications from the Z to the W chromosome in birds-of-paradise (Paradisaeidae, Passeriformes), through sequence transposition. The original transposition involved nine genes, but only two of them (ANXA1 and ALDH1A1) survived on the W chromosomes. Both ANXA1 and ALDH1A1 are predicted to be dosage-sensitive, and the expression of ANXA1 is restricted to ovaries in all the investigated birds. These analyses suggest the newly transposed gene onto the W chromosomes can be favored for their role in restoring dosage imbalance or through female-specific selection. After examining seven additional songbird genomes, we further identified five other transposed genes on the W chromosomes of Darwin’s finches and one in the great tit, expanding the observation of the Z-to-W transpositions to a larger range of bird species, but not all transposed genes exhibit dosage-sensitivity or ovary-biased expression We demonstrate a new mechanism by which the highly degenerated W chromosomes of songbirds can acquire genes from the homologous Z chromosomes, but further functional investigations are needed to validate the evolutionary forces underlying the transpositions. Full article
(This article belongs to the Special Issue Role of Gene Conversion in the Evolution of Sex Chromosomes)
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