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Keywords = PathFinder code

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17 pages, 3028 KiB  
Article
Numerical Solutions to the Variational Problems by Dijkstra’s Path-Finding Algorithm
by Thanaporn Arunthong, Laddawan Rianthakool, Khanchai Prasanai, Chakrit Na Takuathung, Sakchai Chomkokard, Wiwat Wongkokua and Noparit Jinuntuya
Appl. Sci. 2024, 14(22), 10674; https://doi.org/10.3390/app142210674 - 19 Nov 2024
Viewed by 1074
Abstract
In this work, we propose the general idea of using a path-finding algorithm to solve a variational problem. By interpreting a variational problem of finding the function that minimizes a functional integral as a shortest path finding, we can apply the shortest path-finding [...] Read more.
In this work, we propose the general idea of using a path-finding algorithm to solve a variational problem. By interpreting a variational problem of finding the function that minimizes a functional integral as a shortest path finding, we can apply the shortest path-finding algorithm to numerically estimate the optimal function. This can be achieved by discretizing the continuous domain of the variational problem into a spatially weighted graph. The weight of each edge is defined according to the function of the original problem. We adopt the Moser lattice as the discretization scheme since it provides adjustable connections around a vertex. We find that this number of connections is crucial to the estimation of an accurate optimal path. Dijkstra’s shortest path-finding algorithm was chosen due to its simplicity and convenience in implementation. We validate our proposal by applying Dijkstra’s path-finding algorithm to numerically solve three famous variational problems, i.e., the optical ray tracing, the brachistochrone, and the catenary problems. The first two are examples of problems with no constraint. The standard Dijkstra’s algorithm can be directly applied. The third problem is an example of a problem with an isoperimetric constraint. We apply the Lagrangian relaxation technique to relax the optimization in the standard Dijkstra algorithm to incorporate the constraint. In all cases, when the number of sublattices is large enough, the results agree well with the analytic solutions. In all cases, the same path-finding code is used, regardless of the problem details. Our approaches provide more insight and promise to be more flexible than conventional numerical methods. We expect that our method can be useful in practice when an investigation of the optimal path in a complex problem is needed. Full article
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15 pages, 6130 KiB  
Technical Note
An On-Orbit Relative Sensor Normalization for Unbalance Images from the Ice Pathfinder Satellite (BNU-1)
by Sishi Zhang, Xinyi Shang, Lanjing Li, Ying Zhang, Xiaoxu Wu, Fengming Hui, Huabing Huang and Xiao Cheng
Remote Sens. 2023, 15(23), 5439; https://doi.org/10.3390/rs15235439 - 21 Nov 2023
Cited by 1 | Viewed by 1252
Abstract
The Ice Pathfinder satellite (code: BNU-1) is the first Chinese microsatellite, designed for monitoring polar climate and environmental changes. The major payload of BNU-1 is the wide-field camera which provides multispectral satellite images with a 73.69 m spatial resolution and a 739 km [...] Read more.
The Ice Pathfinder satellite (code: BNU-1) is the first Chinese microsatellite, designed for monitoring polar climate and environmental changes. The major payload of BNU-1 is the wide-field camera which provides multispectral satellite images with a 73.69 m spatial resolution and a 739 km swath width. However, the color misrepresentation issue can be observed as the BUN-1 image appears yellowish as it gets farther towards the center field of view (FOV). The blue band of the image appears to be higher near the center FOV and declines generously towards both the edge areas of the image, which may cause the color misrepresentation issue. In this study, we develop a relative sensor normalization method to reduce the radiance errors of the blue band of BNU-1 images. This method uses the radiometric probability density distribution of the BNU-1 panchromatic band as a reference, correcting the probability density distribution of the blue band radiance first. Then, the mean adjustment is used to correct the mean of the blue band radiance after probability density function (PDF) correction, obtaining the corrected radiance in the blue band. Comparisons with the ground measurements and the Landsat8 image reveal the following: (1) The radiances of snow surfaces also have good consistency with ground observations and Landsat-8 images in the red, green, and blue bands. (2) The radiance errors of the uncorrected BNU-1 images are eliminated. The RMSE decreases from 80.30 to 32.54 W/m2/μm/sr. All these results indicate that the on-orbit relative correction method proposed in this study can effectively reduce the radiance errors of the BNU-1 images. Full article
(This article belongs to the Special Issue Monitoring Cold-Region Water Cycles Using Remote Sensing Big Data)
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21 pages, 5560 KiB  
Article
VulPathsFinder: A Static Method for Finding Vulnerable Paths in PHP Applications Based on CPG
by Chunhui Zhao, Tengfei Tu, Cheng Wang and Sujuan Qin
Appl. Sci. 2023, 13(16), 9240; https://doi.org/10.3390/app13169240 - 14 Aug 2023
Cited by 1 | Viewed by 2488
Abstract
Today, as PHP application technology is becoming increasingly mature, the functions of modern multi-layer web applications are becoming more and more complete, and the complexity is also gradually increasing. While providing developers with various business functions and interfaces, multi-tier Web applications also successfully [...] Read more.
Today, as PHP application technology is becoming increasingly mature, the functions of modern multi-layer web applications are becoming more and more complete, and the complexity is also gradually increasing. While providing developers with various business functions and interfaces, multi-tier Web applications also successfully cover the details of application development. This type of web application adopts a unified entrance, many object-oriented codes are used, and features such as encapsulation, inheritance, and polymorphism bring challenges to vulnerability mining from the perspective of static analysis. A large amount of object-oriented code makes it impossible for a simple function name-matching method to build a complete call graph (CG), resulting in the inability to perform a comprehensive interprocedural analysis. At the same time, the encapsulation feature of the class makes the data hidden in the object attribute, and the vulnerability path cannot be obtained through the general data-flow analysis. In response to the above issues, we propose a vulnerability detection method that supports vulnerability detection for multi-layer web applications based on MVC (Model-View-Control) architecture. First, we improve the construction of the call graph and Code Property Graph (CPG). Then, based on the enhanced Code Property Graph, we propose a technique to support vulnerability detection for multi-layer web applications. Based on this approach, we implemented a prototype of VulPathsFinder, a security analysis tool extended from the PHP security analyzer Joern-PHP. Then, we select ten MVC based and ten non-MVC-based applications to form a test dataset and validate the effectiveness of VulPathsFinder based on this dataset. Experimental results show that, compared with currently available tools, VulPathsFinder can handle framework applications more effectively, build a complete code property map, and detect vulnerabilities in framework applications that existing tools cannot detect. Full article
(This article belongs to the Special Issue Progress and Research in Cybersecurity and Data Privacy)
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25 pages, 894 KiB  
Review
Dynamics of Powerful Radio Galaxies
by Ross J. Turner and Stanislav S. Shabala
Galaxies 2023, 11(4), 87; https://doi.org/10.3390/galaxies11040087 - 19 Jul 2023
Cited by 5 | Viewed by 1880
Abstract
Analytical models describing the dynamics of lobed radio sources are essential for interpretation of the tens of millions of radio sources that will be observed by the Square Kilometre Array and pathfinder instruments. We propose that historical models can be grouped into two [...] Read more.
Analytical models describing the dynamics of lobed radio sources are essential for interpretation of the tens of millions of radio sources that will be observed by the Square Kilometre Array and pathfinder instruments. We propose that historical models can be grouped into two classes in which the forward expansion of the radio source is driven by either the jet momentum flux or lobe internal pressure. The most recent generation of analytical models combines these limiting cases for a more comprehensive description. We extend the mathematical formalism of historical models to describe source expansion in non-uniform environments, and directly compare different model classes with each other and with hydrodynamic numerical simulations. We quantify differences in predicted observable characteristics for lobed radio sources due to the different model assumptions for their dynamics. We have made our code for the historical models analysed in this review openly available to the community. Full article
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23 pages, 11605 KiB  
Article
Performance-Based Fire-Protection Design of Public Amenities with Restrained Personnel Activities
by Xuejun Jia, Yongsheng Wang, Jingtao Chen, Ziqiang Fang, Kang Xia and He Wang
Fire 2023, 6(7), 256; https://doi.org/10.3390/fire6070256 - 29 Jun 2023
Viewed by 2661
Abstract
In this paper, performance-based fire-protection design is used for the fire-safety design of public amenities with restrained personnel activities. In these places, tourists’ activities are constrained in a limited space such as cockpit moving along the track. Since it is another typical scenario [...] Read more.
In this paper, performance-based fire-protection design is used for the fire-safety design of public amenities with restrained personnel activities. In these places, tourists’ activities are constrained in a limited space such as cockpit moving along the track. Since it is another typical scenario of fire-protection problem that cannot fully comply with the current mandatory codes and regulations, simulation analysis is used in order to ensure that such fire scenario could achieve performance objectives as expected. Firstly, corresponding fire-protection performance objectives, strategies and simplified evaluation criteria are brought forward in this paper. Then, through simulating the smoke flow in the fire using the computational fluid dynamics software FDS, the effectiveness of the smoke control strategy is verified. Meanwhile, the escaping environments of these fire scenes are analyzed. Further, the personnel evacuation simulation software (Pathfinder) is resorted to simulate the personnel emergency evacuation. The efficiency and the total time that consumed are obtained. Finally, by analyzing the similarities and differences of evacuation under different fire scenes, the fire and smoke spread in the riding area can be effectively controlled, and a safe evacuation environment can be provided for the evacuation of tourists. Full article
(This article belongs to the Special Issue Systemic Analysis Method Applied in Fire Safety)
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16 pages, 6545 KiB  
Article
Experimental and Numerical Study of Pressure Drop Characteristics of Soybean Grain under Vertical Pressure
by Wenlei Liu, Guixiang Chen, Chaosai Liu, Deqian Zheng and Mengmeng Ge
Appl. Sci. 2022, 12(14), 6830; https://doi.org/10.3390/app12146830 - 6 Jul 2022
Cited by 15 | Viewed by 2296
Abstract
The vertical pressure lead to increased airflow resistance through the grain bulk, which affected the efficiency of ventilation and drying. The effects of vertical pressures at 50, 150, and 250 kPa on the pressure drop characteristics of soybeans were studied using experiment and [...] Read more.
The vertical pressure lead to increased airflow resistance through the grain bulk, which affected the efficiency of ventilation and drying. The effects of vertical pressures at 50, 150, and 250 kPa on the pressure drop characteristics of soybeans were studied using experiment and numerical simulation. The random packing and different compression states for soybean packed beds were generated by the Discrete Element Method (DEM). The Discrete Element Method (DEM) and Computational Fluid Dynamics (CFD) were coupled to investigate the radial velocity and pressure drop of soybean bulk. The simulation results showed that the radial porosity had an oscillating distribution, and the radial average dimensionless velocity was consistent with the distribution trend of porosity. The increase in vertical pressure causes a decrease in porosity and an increase in local velocity. The PathFinder code was used as a supplementary method to calculate the pore path and pore characterization parameters, and the resistance coefficient term in the Forchheimer equation was determined. The compression of soybeans measured by the experiment mainly occurred within two hours after loading. The pressure drop of soybeans increased with the vertical pressure, with the average pressure drop at vertical pressures of 50, 150, and 250 kPa being 36%, 57%, and 92% higher than the uncompressed state (0 kPa). The pressure drop of soybeans calculated by the DEM-CFD method and the Forchheimer equation under different vertical pressures were in close agreement with the experimental results, and an average relative difference was found to be less than 10%. These results provide guidance for estimating the pressure drop of soybeans at different grain depths. Full article
(This article belongs to the Section Agricultural Science and Technology)
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12 pages, 2690 KiB  
Article
Aerosol Characteristics and Their Impact on the Himalayan Energy Budget
by Kesar Chand, Jagdish Chandra Kuniyal, Shruti Kanga, Raj Paul Guleria, Gowhar Meraj, Pankaj Kumar, Majid Farooq, Suraj Kumar Singh, Mahendra Singh Nathawat, Netrananda Sahu and Raj Kumar
Sustainability 2022, 14(1), 179; https://doi.org/10.3390/su14010179 - 24 Dec 2021
Cited by 11 | Viewed by 4203
Abstract
The extensive work on the increasing burden of aerosols and resultant climate implications shows a matter of great concern. In this study, we investigate the aerosol optical depth (AOD) variations in the Indian Himalayan Region (IHR) between its plains and alpine regions and [...] Read more.
The extensive work on the increasing burden of aerosols and resultant climate implications shows a matter of great concern. In this study, we investigate the aerosol optical depth (AOD) variations in the Indian Himalayan Region (IHR) between its plains and alpine regions and the corresponding consequences on the energy balance on the Himalayan glaciers. For this purpose, AOD data from Moderate Resolution Imaging Spectroradiometer (MODIS, MOD-L3), Aerosol Robotic Network (AERONET), India, and Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO) were analyzed. Aerosol radiative forcing (ARF) was assessed using the atmospheric radiation transfer model (RTM) integrated into AERONET inversion code based on the Discrete Ordinate Radiative Transfer (DISORT) module. Further, air mass trajectory over the entire IHR was analyzed using a hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) model. We estimated that between 2001 and 2015, the monthly average ARF at the surface (ARFSFC), top of the atmosphere (ARFTOA), and atmosphere (ARFATM) were −89.6 ± 18.6 Wm−2, −25.2 ± 6.8 Wm−2, and +64.4 ± 16.5 Wm−2, respectively. We observed that during dust aerosol transport days, the ARFSFC and TOA changed by −112.2 and −40.7 Wm−2, respectively, compared with low aerosol loading days, thereby accounting for the decrease in the solar radiation by 207% reaching the surface. This substantial decrease in the solar radiation reaching the Earth’s surface increases the heating rate in the atmosphere by 3.1-fold, thereby acting as an additional forcing factor for accelerated melting of the snow and glacier resources of the IHR. Full article
(This article belongs to the Special Issue Impact of Indo-Pacific Climate Variability)
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20 pages, 5935 KiB  
Article
Accuracy Evaluation on Geolocation of the Chinese First Polar Microsatellite (Ice Pathfinder) Imagery
by Ying Zhang, Zhaohui Chi, Fengming Hui, Teng Li, Xuying Liu, Baogang Zhang, Xiao Cheng and Zhuoqi Chen
Remote Sens. 2021, 13(21), 4278; https://doi.org/10.3390/rs13214278 - 24 Oct 2021
Cited by 10 | Viewed by 3766
Abstract
Ice Pathfinder (Code: BNU-1), launched on 12 September 2019, is the first Chinese polar observation microsatellite. Its main payload is a wide-view camera with a ground resolution of 74 m at the subsatellite point and a scanning width of 744 km. BNU-1 takes [...] Read more.
Ice Pathfinder (Code: BNU-1), launched on 12 September 2019, is the first Chinese polar observation microsatellite. Its main payload is a wide-view camera with a ground resolution of 74 m at the subsatellite point and a scanning width of 744 km. BNU-1 takes into account the balance between spatial resolution and revisit frequency, providing observations with finer spatial resolution than Terra/Aqua MODIS data and more frequent revisits than Landsat-8 OLI and Sentinel-2 MSI. It is a valuable supplement for polar observations. Geolocation is an essential step in satellite image processing. This study aims to geolocate BNU-1 images; this includes two steps. For the first step, a geometric calibration model is applied to transform the image coordinates to geographic coordinates. The images calibrated by the geometric model are the Level1A (L1A) product. Due to the inaccuracy of satellite attitude and orbit parameters, the geometric calibration model also exhibits errors, resulting in geolocation errors in the BNU-1 L1A product. Then, a geometric correction method is applied as the second step to find the control points (CPs) extracted from the BNU-1 L1A product and the corresponding MODIS images. These CPs are used to estimate and correct geolocation errors. The BNU-1 L1A product corrected by the geometric correction method is processed to the Level1B (L1B) product. Although the geometric correction method based on CPs has been widely used to correct the geolocation errors of visible remote sensing images, it is difficult to extract enough CPs from polar images due to the high reflectance of snow and ice. In this study, the geometric correction employs an image division and an image enhancement method to extract more CPs from the BNU-1 L1A products. The results indicate that the number of CPs extracted by the division and image enhancements increases by about 30% to 182%. Twenty-eight images of Antarctica and fifteen images of Arctic regions were evaluated to assess the performance of the geometric correction. The average geolocation error was reduced from 10 km to ~300 m. In general, this study presents the geolocation method, which could serve as a reference for the geolocation of other visible remote sensing images for polar observations. Full article
(This article belongs to the Topic Climate Change and Environmental Sustainability)
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30 pages, 1055 KiB  
Article
A Double-Level Model Checking Approach for an Agent-Based Autonomous Vehicle and Road Junction Regulations
by Gleifer Vaz Alves, Louise Dennis and Michael Fisher
J. Sens. Actuator Netw. 2021, 10(3), 41; https://doi.org/10.3390/jsan10030041 - 25 Jun 2021
Cited by 13 | Viewed by 3909
Abstract
Usually, the design of an Autonomous Vehicle (AV) does not take into account traffic rules and so the adoption of these rules can bring some challenges, e.g., how to come up with a Digital Highway Code which captures the proper behaviour of an [...] Read more.
Usually, the design of an Autonomous Vehicle (AV) does not take into account traffic rules and so the adoption of these rules can bring some challenges, e.g., how to come up with a Digital Highway Code which captures the proper behaviour of an AV against the traffic rules and at the same time minimises changes to the existing Highway Code? Here, we formally model and implement three Road Junction rules (from the UK Highway Code). We use timed automata to model the system and the MCAPL (Model Checking Agent Programming Language) framework to implement an agent and its environment. We also assess the behaviour of our agent according to the Road Junction rules using a double-level Model Checking technique, i.e., UPPAAL at the design level and AJPF (Agent Java PathFinder) at the development level. We have formally verified 30 properties (18 with UPPAAL and 12 with AJPF), where these properties describe the agent’s behaviour against the three Road Junction rules using a simulated traffic scenario, including artefacts like traffic signs and road users. In addition, our approach aims to extract the best from the double-level verification, i.e., using time constraints in UPPAAL timed automata to determine thresholds for the AVs actions and tracing the agent’s behaviour by using MCAPL, in a way that one can tell when and how a given Road Junction rule was selected by the agent. This work provides a proof-of-concept for the formal verification of AV behaviour with respect to traffic rules. Full article
(This article belongs to the Special Issue Agents and Robots for Reliable Engineered Autonomy)
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16 pages, 679 KiB  
Article
Multipath Dynamic Adaptive Streaming over HTTP Using Scalable Video Coding in Software Defined Networking
by Ali Gohar and Sanghwan Lee
Appl. Sci. 2020, 10(21), 7691; https://doi.org/10.3390/app10217691 - 30 Oct 2020
Cited by 3 | Viewed by 3051
Abstract
Dynamic Adaptive Streaming over HTTP (DASH) offers adaptive and dynamic multimedia streaming solutions to heterogeneous end systems. However, it still faces many challenges in determining an appropriate rate adaptation technique to provide the best quality of experience (QoE) to the end systems. Most [...] Read more.
Dynamic Adaptive Streaming over HTTP (DASH) offers adaptive and dynamic multimedia streaming solutions to heterogeneous end systems. However, it still faces many challenges in determining an appropriate rate adaptation technique to provide the best quality of experience (QoE) to the end systems. Most of the suggested approaches rely on servers or client-side heuristics to improve multimedia streaming QoE. Moreover, using evolving technologies such as Software Defined Networking (SDN) that provide a network overview, combined with Multipath Transmission Control Protocol (MPTCP), can enhance the QoE of streaming multimedia media based on scalable video coding (SVC). Therefore, we enhance our previous work and propose a Dynamic Multi Path Finder (DMPF) scheduler that determines optimal techniques to enhance QoE. DMPF scheduler is a part of the DMPF Scheduler Module (DSM) which runs as an application over the SDN controller. The DMPF scheduler accommodates maximum client requests while providing the basic representation of the media requested. We evaluate our implementation on real network topology and explore how SVC layers should be transferred over network topology. We also test the scheduler for network bandwidth usage. Through extensive simulations, we show clear trade-offs between the number of accommodated requests and the quality of the streaming. We conclude that it is better to schedule the layers of a request into the same path as much as possible than into multiple paths. Furthermore, these result would help service providers optimize their services. Full article
(This article belongs to the Section Electrical, Electronics and Communications Engineering)
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19 pages, 5457 KiB  
Article
Alt-Splice Gene Predictor Using Multitrack-Clique Analysis: Verification of Statistical Support for Modelling in Genomes of Multicellular Eukaryotes
by Stephen Winters-Hilt and Andrew J. Lewis
Informatics 2017, 4(1), 3; https://doi.org/10.3390/informatics4010003 - 12 Jan 2017
Cited by 1 | Viewed by 7169
Abstract
One of the main limitations of the typical hidden Markov model (HMM) implementation for gene structure identification is that a single structure is identified on a given sequence of genomic data—i.e., identification of overlapping structure is not directly possible, and certainly not possible [...] Read more.
One of the main limitations of the typical hidden Markov model (HMM) implementation for gene structure identification is that a single structure is identified on a given sequence of genomic data—i.e., identification of overlapping structure is not directly possible, and certainly not possible within the confines of the optimal Viterbi path evaluation. This is a huge limitation given that we now know that significant portions of eukaryotic genomes, particularly mammalian genomes, are alternatively spliced, and, thus, have overlapping structure in the sense of the mRNA transcripts that result. Using the general meta-state HMM approach developed in prior work, however, more than one ‘track’ of annotation can be accommodated, thereby allowing a direct implementation of an alternative-splice gene-structure identifier. In this paper we examine the representation of alternative splicing annotation in the multi-track context, and show that the proliferation on states is manageable, and has sufficient statistical support on the genomes examined (human, mouse, worm, and fly) that a full alt-splice meta-state HMM gene finder can be implemented with sufficient statistical support. In the process of performing the alternative splicing analysis on alt-splice event counts we expected to see an increase in alternative splicing complexity as the organism becomes more complex, and this is seen with the percentage of genes with alt-splice variants increasing from worm to fly to the mammalian genomes (mouse and human). Of particular note is an increase in alternative splicing variants at the start and end of coding with the more complex organisms studied (mouse and human), indicating rapid new first and last exon recruitment that is possibly spliceosome mediated. This suggests that spliceosome-mediated refinements (acceleration) of gene structure variation and selection, with increasing levels of sophistication, has occurred in eukaryotes and in mammals especially. Full article
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21 pages, 371 KiB  
Review
Non-Coding RNAs in Retinal Development
by Nicola A. Maiorano and Robert Hindges
Int. J. Mol. Sci. 2012, 13(1), 558-578; https://doi.org/10.3390/ijms13010558 - 5 Jan 2012
Cited by 30 | Viewed by 8640
Abstract
Retinal development is dependent on an accurately functioning network of transcriptional and translational regulators. Among the diverse classes of molecules involved, non-coding RNAs (ncRNAs) play a significant role. Members of this family are present in the cell as transcripts, but are not translated [...] Read more.
Retinal development is dependent on an accurately functioning network of transcriptional and translational regulators. Among the diverse classes of molecules involved, non-coding RNAs (ncRNAs) play a significant role. Members of this family are present in the cell as transcripts, but are not translated into proteins. MicroRNAs (miRNAs) are small ncRNAs that act as post-transcriptional regulators. During the last decade, they have been implicated in a variety of biological processes, including the development of the nervous system. On the other hand, long-ncRNAs (lncRNAs) represent a different class of ncRNAs that act mainly through processes involving chromatin remodeling and epigenetic mechanisms. The visual system is a prominent model to investigate the molecular mechanisms underlying neurogenesis or circuit formation and function, including the differentiation of retinal progenitor cells to generate the seven principal cell classes in the retina, pathfinding decisions of retinal ganglion cell axons in order to establish the correct connectivity from the eye to the brain proper, and activity-dependent mechanisms for the functionality of visual circuits. Recent findings have associated ncRNAs in several of these processes and uncovered a new level of complexity for the existing regulatory mechanisms. This review summarizes and highlights the impact of ncRNAs during the development of the vertebrate visual system, with a specific focus on the role of miRNAs and a synopsis regarding recent findings on lncRNAs in the retina. Full article
(This article belongs to the Special Issue Non-Coding RNAs)
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