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Keywords = T2-weighted imaging (T2WI)

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16 pages, 3440 KB  
Article
Multimodal-Imaging-Based Interpretable Deep Learning Framework for Distinguishing Brucella from Tuberculosis Spondylitis: A Dual-Center Study
by Mayidili Nijiati, Mei Zhang, Chencui Huang, Xinyue Chou, Lingyan Shen, Haiting Ma, Zhenwei Ren, Maimaitishawutiaji Maimaiti, Yi You, Xiaoguang Zou and Yunling Wang
Diagnostics 2025, 15(23), 2963; https://doi.org/10.3390/diagnostics15232963 (registering DOI) - 22 Nov 2025
Abstract
Objectives: Brucella spondylitis (BS) and tuberculosis spondylitis (TS) are two causes of infection that share overlapping clinical and imaging features, complicating diagnoses. Early differentiation is critical, as treatment regimens differ significantly. This study aims to develop a deep learning framework using multimodal computed [...] Read more.
Objectives: Brucella spondylitis (BS) and tuberculosis spondylitis (TS) are two causes of infection that share overlapping clinical and imaging features, complicating diagnoses. Early differentiation is critical, as treatment regimens differ significantly. This study aims to develop a deep learning framework using multimodal computed tomography (CT) and magnetic resonance imaging (MRI) data to accurately distinguish between these two conditions, improving diagnostic accuracy and patient outcomes. Methods: In this study, imaging data were acquired from two centers using different MRI and CT protocols. Sagittal T1-weighted (T1WI) and T2-weighted imaging (T2WI), fat-suppression sequences (T2WI FSE), and sagittal CT data were collected. Image preprocessing included region of interest (ROI) segmentation, and normalization and augmentation techniques were used. A deep learning model, based on pre-trained GoogleNet architectures, was trained and evaluated against human radiologists using metrics including accuracy, sensitivity, and AUC to assess diagnostic performance. Results: In this study, the GoogleNet deep learning model outperformed other architectures in classifying TS and BS, achieving AUCs of 95.97%, 91.24%, and 81.25% across training, test, and external validation datasets, respectively. In contrast, ResNet, DenseNet, and EfficientNet models showed lower AUC values. GoogleNet also demonstrated high accuracy (90.77% training, 83.04% test) and 90.91% sensitivity and 61.11% specificity in external validation. When compared to three radiologists, GoogleNet outperformed in diagnostic accuracy and speed, achieving an AUC of 88.01% and processing cases in 0.001 min. These findings highlight the potential of AI to enhance diagnostic performance and efficiency. Lastly, the explanation provided by the Grad-Cam model precisely localized major lesions. Conclusions: This multimodal-imaging-based deep learning model could well differentiate TS and BS. Deep learning does not need manual feature extraction, selection, or model development, and has great potential in daily clinical practice. Full article
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14 pages, 1881 KB  
Article
MRI Radiomics for Predicting the Diffuse Type of Tenosynovial Giant Cell Tumor: An Exploratory Study
by Seul Ki Lee, Min Wook Joo, Jee-Young Kim and Mingeon Kim
Diagnostics 2025, 15(18), 2399; https://doi.org/10.3390/diagnostics15182399 - 20 Sep 2025
Viewed by 583
Abstract
Objective: To develop and validate a radiomics-based MRI model for prediction of diffuse-type tenosynovial giant cell tumor (D-TGCT), which has higher postoperative recurrence and more aggressive behavior than localized-type (L-TGCT). The study was conducted under the hypothesis that MRI-based radiomics models can predict [...] Read more.
Objective: To develop and validate a radiomics-based MRI model for prediction of diffuse-type tenosynovial giant cell tumor (D-TGCT), which has higher postoperative recurrence and more aggressive behavior than localized-type (L-TGCT). The study was conducted under the hypothesis that MRI-based radiomics models can predict D-TGCT with diagnostic performance significantly greater than chance level, as measured by the area under the receiver operating characteristic (ROC) curve (AUC) (null hypothesis: AUC ≤ 0.5; alternative hypothesis: AUC > 0.5). Materials and Methods: This retrospective study included 84 patients with histologically confirmed TGCT (54 L-TGCT, 30 D-TGCT) who underwent preoperative MRI between January 2005 and December 2024. Tumor segmentation was manually performed on T2-weighted (T2WI) and contrast-enhanced T1-weighted images. After standardized preprocessing, 1691 radiomic features were extracted, and feature selection was performed using minimum redundancy maximum relevance. Multivariate logistic regression (MLR) and random forest (RF) classifiers were developed using a training cohort (n = 52) and tested in an independent test cohort (n = 32). Model performance was assessed AUC, sensitivity, specificity, and accuracy. Results: In the training set, D-TGCT prevalence was 32.6%; in the test set, it was 40.6%. The MLR model used three T2WI features: wavelet-LHL_glszm_GrayLevelNonUniformity, wavelet-HLL_gldm_LowGrayLevelEmphasis, and square_firstorder_Median. Training performance was high (AUC 0.94; sensitivity 75.0%; specificity 90.9%; accuracy 85.7%) but dropped in testing (AUC 0.60; sensitivity 62.5%; specificity 60.6%; accuracy 61.2%). The RF classifier demonstrated more stable performance [(training) AUC 0.85; sensitivity 43.8%; specificity 87.9%; accuracy 73.5% and (test) AUC 0.73; sensitivity 56.2%; specificity 72.7%; accuracy 67.3%]. Conclusions: Radiomics-based MRI models may help predict D-TGCT. While the MLR model overfitted, the RF classifier demonstrated relatively greater robustness and generalizability, suggesting that it may support clinical decision-making for D-TGCT in the future. Full article
(This article belongs to the Special Issue Innovative Diagnostic Imaging Technology in Musculoskeletal Tumors)
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26 pages, 917 KB  
Systematic Review
Radiomics in Pituitary Adenomas: A Systematic Review of Clinical Applications and Predictive Models
by Edoardo Agosti, Marcello Mangili, Pier Paolo Panciani, Lorenzo Ugga, Vittorio Rampinelli, Marco Ravanelli, Alessandro Fiorindi and Marco Maria Fontanella
J. Clin. Med. 2025, 14(18), 6595; https://doi.org/10.3390/jcm14186595 - 18 Sep 2025
Viewed by 1114
Abstract
Background: Radiomics offers quantitative, high-dimensional data from conventional imaging and holds promise for improving diagnosis and treatment of pituitary adenomas (PAs). This systematic review aimed to synthesize current clinical applications of radiomics in PAs, focusing on diagnostic, predictive, and prognostic modeling. Methods [...] Read more.
Background: Radiomics offers quantitative, high-dimensional data from conventional imaging and holds promise for improving diagnosis and treatment of pituitary adenomas (PAs). This systematic review aimed to synthesize current clinical applications of radiomics in PAs, focusing on diagnostic, predictive, and prognostic modeling. Methods: This review followed the PRISMA 2020 guidelines. A systematic search was performed in PubMed, Scopus, and Web of Science on 10 January 2024, and updated on 5 March 2024, using predefined keywords and MeSH terms. Studies were included if they evaluated radiomics-based models using MRI for diagnosis, classification, consistency, invasiveness, treatment response, or recurrence in human PA populations. Data extraction included study design, sample size, MRI sequences, feature types, machine learning algorithms, and model performance metrics. Study quality was assessed via the Newcastle-Ottawa Scale. Descriptive statistics summarized study characteristics; no meta-analysis was performed due to heterogeneity. Results: Out of 341 identified articles, 49 studies met inclusion criteria, encompassing a total of more than 9350 patients. The majority were retrospective (43 studies, 88%). MRI sequences used included T2-weighted imaging (35 studies, 71%), contrast-enhanced T1WI (34 studies, 69%), and T1WI (21 studies, 43%). PyRadiomics was the most common feature extraction tool (20 studies, 41%). Machine learning was employed in 43 studies (88%), predominantly support vector machines (16 studies, 33%), random forests (9 studies, 18%), and logistic regression (9 studies, 18%). Deep learning methods were applied in 17 studies (35%). Regarding diagnostic performance, 22 studies (45%) reported an (AUC) ≥0.85 in test datasets. External validation was performed in only 6 studies (12%). Radiomics applications included histological subtype prediction (14 studies, 29%), surgical outcome prediction (13 studies, 27%), invasiveness assessment (7 studies, 15%), tumor consistency evaluation (8 studies, 16%), and response to medical or radiotherapy treatments (3 studies, 6%). One study (2%) addressed automated segmentation and volumetry. Conclusions: Radiomics enables high-performance, noninvasive prediction of PA subtypes, consistency, invasiveness, treatment response, and recurrence, with 22 studies (45%) reporting AUC ≥0.85. Despite promising results, clinical translation remains limited by methodological heterogeneity, low external validation (6 studies, 12%), and lack of standardization. Full article
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14 pages, 2727 KB  
Article
A Multimodal MRI-Based Model for Colorectal Liver Metastasis Prediction: Integrating Radiomics, Deep Learning, and Clinical Features with SHAP Interpretation
by Xin Yan, Furui Duan, Lu Chen, Runhong Wang, Kexin Li, Qiao Sun and Kuang Fu
Curr. Oncol. 2025, 32(8), 431; https://doi.org/10.3390/curroncol32080431 - 30 Jul 2025
Viewed by 1801
Abstract
Purpose: Predicting colorectal cancer liver metastasis (CRLM) is essential for prognostic assessment. This study aims to develop and validate an interpretable multimodal machine learning framework based on multiparametric MRI for predicting CRLM, and to enhance the clinical interpretability of the model through [...] Read more.
Purpose: Predicting colorectal cancer liver metastasis (CRLM) is essential for prognostic assessment. This study aims to develop and validate an interpretable multimodal machine learning framework based on multiparametric MRI for predicting CRLM, and to enhance the clinical interpretability of the model through SHapley Additive exPlanations (SHAP) analysis and deep learning visualization. Methods: This multicenter retrospective study included 463 patients with pathologically confirmed colorectal cancer from two institutions, divided into training (n = 256), internal testing (n = 111), and external validation (n = 96) sets. Radiomics features were extracted from manually segmented regions on axial T2-weighted imaging (T2WI) and diffusion-weighted imaging (DWI). Deep learning features were obtained from a pretrained ResNet101 network using the same MRI inputs. A least absolute shrinkage and selection operator (LASSO) logistic regression classifier was developed for clinical, radiomics, deep learning, and combined models. Model performance was evaluated by AUC, sensitivity, specificity, and F1-score. SHAP was used to assess feature contributions, and Grad-CAM was applied to visualize deep feature attention. Results: The combined model integrating features across the three modalities achieved the highest performance across all datasets, with AUCs of 0.889 (training), 0.838 (internal test), and 0.822 (external validation), outperforming single-modality models. Decision curve analysis (DCA) revealed enhanced clinical net benefit from the integrated model, while calibration curves confirmed its good predictive consistency. SHAP analysis revealed that radiomic features related to T2WI texture (e.g., LargeDependenceLowGrayLevelEmphasis) and clinical biomarkers (e.g., CA19-9) were among the most predictive for CRLM. Grad-CAM visualizations confirmed that the deep learning model focused on tumor regions consistent with radiological interpretation. Conclusions: This study presents a robust and interpretable multiparametric MRI-based model for noninvasively predicting liver metastasis in colorectal cancer patients. By integrating handcrafted radiomics and deep learning features, and enhancing transparency through SHAP and Grad-CAM, the model provides both high predictive performance and clinically meaningful explanations. These findings highlight its potential value as a decision-support tool for individualized risk assessment and treatment planning in the management of colorectal cancer. Full article
(This article belongs to the Section Gastrointestinal Oncology)
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19 pages, 1282 KB  
Article
The Role of Radiomic Analysis and Different Machine Learning Models in Prostate Cancer Diagnosis
by Eleni Bekou, Ioannis Seimenis, Athanasios Tsochatzis, Karafyllia Tziagkana, Nikolaos Kelekis, Savas Deftereos, Nikolaos Courcoutsakis, Michael I. Koukourakis and Efstratios Karavasilis
J. Imaging 2025, 11(8), 250; https://doi.org/10.3390/jimaging11080250 - 23 Jul 2025
Viewed by 1113
Abstract
Prostate cancer (PCa) is the most common malignancy in men. Precise grading is crucial for the effective treatment approaches of PCa. Machine learning (ML) applied to biparametric Magnetic Resonance Imaging (bpMRI) radiomics holds promise for improving PCa diagnosis and prognosis. This study investigated [...] Read more.
Prostate cancer (PCa) is the most common malignancy in men. Precise grading is crucial for the effective treatment approaches of PCa. Machine learning (ML) applied to biparametric Magnetic Resonance Imaging (bpMRI) radiomics holds promise for improving PCa diagnosis and prognosis. This study investigated the efficiency of seven ML models to diagnose the different PCa grades, changing the input variables. Our studied sample comprised 214 men who underwent bpMRI in different imaging centers. Seven ML algorithms were compared using radiomic features extracted from T2-weighted (T2W) and diffusion-weighted (DWI) MRI, with and without the inclusion of Prostate-Specific Antigen (PSA) values. The performance of the models was evaluated using the receiver operating characteristic curve analysis. The models’ performance was strongly dependent on the input parameters. Radiomic features derived from T2WI and DWI, whether used independently or in combination, demonstrated limited clinical utility, with AUC values ranging from 0.703 to 0.807. However, incorporating the PSA index significantly improved the models’ efficiency, regardless of lesion location or degree of malignancy, resulting in AUC values ranging from 0.784 to 1.00. There is evidence that ML methods, in combination with radiomic analysis, can contribute to solving differential diagnostic problems of prostate cancers. Also, optimization of the analysis method is critical, according to the results of our study. Full article
(This article belongs to the Section Medical Imaging)
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21 pages, 1889 KB  
Article
Optimizing Glioblastoma Multiforme Diagnosis: Semantic Segmentation and Survival Modeling Using MRI and Genotypic Data
by Yu-Hung Tsai, Wen-Yu Cheng, Bo-Hua Huang, Chiung-Chyi Shen and Meng-Hsiun Tsai
Electronics 2025, 14(12), 2498; https://doi.org/10.3390/electronics14122498 - 19 Jun 2025
Viewed by 911
Abstract
Glioblastoma multiforme (GBM) is the most aggressive and common primary brain tumor. Magnetic resonance imaging (MRI) provides detailed visualization of tumor morphology, edema, and necrosis. However, manually segmenting GBM from MRI scans is time-consuming, subjective, and prone to inter-observer variability. Therefore, automated and [...] Read more.
Glioblastoma multiforme (GBM) is the most aggressive and common primary brain tumor. Magnetic resonance imaging (MRI) provides detailed visualization of tumor morphology, edema, and necrosis. However, manually segmenting GBM from MRI scans is time-consuming, subjective, and prone to inter-observer variability. Therefore, automated and reliable segmentation methods are crucial for improving diagnostic accuracy. This study employs an image semantic segmentation model to segment brain tumors in MRI scans of GBM patients. The MRI recall images include T1-weighted imaging (T1WI) and fluid-attenuated inversion recovery (FLAIR) sequences. To enhance the performance of the semantic segmentation model, image preprocessing techniques were applied before analyzing and comparing commonly used segmentation models. Additionally, a survival model was constructed using discrete genotype attributes of GBM patients. The results indicate that the DeepLabV3+ model achieved the highest accuracy for semantic segmentation, with an accuracy of 77.9% on T1WI image sequences, while the U-Net model achieved 80.1% accuracy on FLAIR image sequences. Furthermore, in constructing the survival model using a discrete attribute dataset, the dataset was divided into three subsets based on different missing value handling strategies. This study found that replacing missing values with 1 resulted in the highest accuracy, with the Bernoulli Bayesian model and the multinomial Bayesian model achieving an accuracy of 94.74%. This study integrates image preprocessing techniques and semantic segmentation models to improve the accuracy and efficiency of brain tumor segmentation while also developing a highly accurate survival model. The findings aim to assist physicians in saving time and facilitating preliminary diagnosis and analysis. Full article
(This article belongs to the Special Issue Image Segmentation, 2nd Edition)
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13 pages, 2605 KB  
Article
Magnetic Resonance Imaging Radiomics-Driven Artificial Neural Network Model for Advanced Glioma Grading Assessment
by Yan Qin, Wei You, Yulong Wang, Yu Zhang, Zhijie Xu, Qingling Li, Yuelong Zhao, Zhiwei Mou and Yitao Mao
Medicina 2025, 61(6), 1034; https://doi.org/10.3390/medicina61061034 - 3 Jun 2025
Viewed by 713
Abstract
Background and Objectives: Gliomas are characterized by high disability rates, frequent recurrence, and low survival rates, posing a significant threat to human health. Accurate grading of gliomas is crucial for treatment plan selection and prognostic assessment. Previous studies have primarily focused on [...] Read more.
Background and Objectives: Gliomas are characterized by high disability rates, frequent recurrence, and low survival rates, posing a significant threat to human health. Accurate grading of gliomas is crucial for treatment plan selection and prognostic assessment. Previous studies have primarily focused on the binary classification (i.e., high grade vs. low grade) of gliomas. In order to perform the four-grade (grades I, II, III, and IV) glioma classification preoperatively, we constructed an artificial neural network (ANN) model using magnetic resonance imaging data. Materials and Methods: We reviewed and included patients with gliomas who underwent preoperative MRI examinations. Radiomics features were derived from contrast-enhanced T1-weighted images (CE-T1WI) using Pyradiomics and were selected based on their Spearman’s rank correlation with glioma grades. We developed an ANN model to classify the four pathological grades of glioma, assigning training and validation sets at a 3:1 ratio. A diagnostic confusion matrix was employed to demonstrate the model’s diagnostic performance intuitively. Results: Among the 362-patient cohort, the ANN model’s diagnostic performance plateaued after incorporating the first 19 of the 530 extracted radiomic features. At this point, the average overall diagnostic accuracy ratings for the training and validation sets were 91.28% and 87.04%, respectively, with corresponding coefficients of variation (CVs) of 0.0190 and 0.0272. The diagnostic accuracies for grades I, II, III, and IV in the training set were 91.9%, 89.9%, 92.1%, and 90.7%, respectively. The diagnostic accuracies for grades I, II, III, and IV in the validation set were 88.7%, 87.1%, 86.5%, and 86.9%, respectively. Conclusions: The MRI radiomics-based ANN model shows promising potential for the four-type classification of glioma grading, offering an objective and noninvasive method for more refined glioma grading. This model could aid in clinical decision making regarding the treatment of patients with various grades of gliomas. Full article
(This article belongs to the Special Issue Early Diagnosis and Management of Glioma)
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19 pages, 876 KB  
Article
MRMS-CNNFormer: A Novel Framework for Predicting the Biochemical Recurrence of Prostate Cancer on Multi-Sequence MRI
by Tao Lian, Mengting Zhou, Yangyang Shao, Xiaqing Chen, Yinghua Zhao and Qianjin Feng
Bioengineering 2025, 12(5), 538; https://doi.org/10.3390/bioengineering12050538 - 16 May 2025
Cited by 1 | Viewed by 999
Abstract
Accurate preoperative prediction of biochemical recurrence (BCR) in prostate cancer (PCa) is essential for treatment optimization, and demands an explicit focus on tumor microenvironment (TME). To address this, we developed MRMS-CNNFormer, an innovative framework integrating 2D multi-region (intratumoral, peritumoral, and [...] Read more.
Accurate preoperative prediction of biochemical recurrence (BCR) in prostate cancer (PCa) is essential for treatment optimization, and demands an explicit focus on tumor microenvironment (TME). To address this, we developed MRMS-CNNFormer, an innovative framework integrating 2D multi-region (intratumoral, peritumoral, and periprostatic) and multi-sequence magnetic resonance imaging (MRI) images (T2-weighted imaging with fat suppression (T2WI-FS) and diffusion-weighted imaging (DWI)) with clinical characteristics. The framework utilizes a CNN-based encoder for imaging feature extraction, followed by a transformer-based encoder for multi-modal feature integration, and ultimately employs a fully connected (FC) layer for final BCR prediction. In this multi-center study (46 BCR-positive cases, 186 BCR-negative cases), patients from centers A and B were allocated to training (n = 146) and validation (n = 36) sets, while center C patients (n = 50) formed the external test set. The multi-region MRI-based model demonstrated superior performance (AUC, 0.825; 95% CI, 0.808–0.852) compared to single-region models. The integration of clinical data further enhanced the model’s predictive capability (AUC 0.835; 95% CI, 0.818–0.869), significantly outperforming the clinical model alone (AUC 0.612; 95% CI, 0.574–0.646). MRMS-CNNFormer provides a robust, non-invasive approach for BCR prediction, offering valuable insights for personalized treatment planning and clinical decision making in PCa management. Full article
(This article belongs to the Section Biosignal Processing)
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14 pages, 469 KB  
Systematic Review
A Review of Artificial Intelligence-Based Systems for Non-Invasive Glioblastoma Diagnosis
by Kebin Contreras, Patricia E. Velez-Varela, Oscar Casanova-Carvajal, Angel Luis Alvarez and Ana Lorena Urbano-Bojorge
Life 2025, 15(4), 643; https://doi.org/10.3390/life15040643 - 14 Apr 2025
Cited by 1 | Viewed by 1558
Abstract
Background: Glioblastoma multiforme (GBM) is an aggressive brain tumor with a poor prognosis. Traditional diagnosis relies on invasive biopsies, which pose surgical risks. Advances in artificial intelligence (AI) and machine learning (ML) have improved non-invasive GBM diagnosis using magnetic resonance imaging (MRI), offering [...] Read more.
Background: Glioblastoma multiforme (GBM) is an aggressive brain tumor with a poor prognosis. Traditional diagnosis relies on invasive biopsies, which pose surgical risks. Advances in artificial intelligence (AI) and machine learning (ML) have improved non-invasive GBM diagnosis using magnetic resonance imaging (MRI), offering potential advantages in accuracy and efficiency. Objective: This review aims to identify the methodologies and technologies employed in AI-based GBM diagnostics. It further evaluates the performance of AI models using standard metrics, highlighting both their strengths and limitations. Methodology: In accordance with the preferred reporting items for systematic reviews and meta-analyses (PRISMA) guidelines, a systematic review was conducted across major academic databases. A total of 104 articles were identified in the initial search, and 15 studies were selected for final analysis after applying inclusion and exclusion criteria. Outcomes: The  included studies indicated  that the signal T1-weighted imaging (T1WI) is the most frequently used MRI modality in AI-based GBM diagnostics. Multimodal approaches integrating T1WI with diffusion-weighted imaging (DWI) and apparent diffusion coefficient (ADC) have demonstrated improved classification performance. Additionally, AI models have shown potential in surpassing conventional diagnostic methods, enabling automated tumor classification and enhancing prognostic predictions. Full article
(This article belongs to the Section Medical Research)
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13 pages, 1554 KB  
Article
Predictive Potential of Contrast-Enhanced MRI-Based Delta-Radiomics for Chemoradiation Responsiveness in Muscle-Invasive Bladder Cancer
by Kohei Isemoto, Yuma Waseda, Motohiro Fujiwara, Koichiro Kimura, Daisuke Hirahara, Tatsunori Saho, Eichi Takaya, Yuki Arita, Thomas C. Kwee, Shohei Fukuda, Hajime Tanaka, Soichiro Yoshida and Yasuhisa Fujii
Diagnostics 2025, 15(7), 801; https://doi.org/10.3390/diagnostics15070801 - 21 Mar 2025
Cited by 1 | Viewed by 1345
Abstract
Background/Objectives: Delta-radiomics involves analyzing feature variations at different acquisition time-points. This study aimed to assess the utility of delta-radiomics feature analysis applied to contrast-enhanced (CE) and non-contrast-enhanced (NE) T1-weighted images (WI) in predicting the therapeutic response to chemoradiotherapy (CRT) in patients diagnosed [...] Read more.
Background/Objectives: Delta-radiomics involves analyzing feature variations at different acquisition time-points. This study aimed to assess the utility of delta-radiomics feature analysis applied to contrast-enhanced (CE) and non-contrast-enhanced (NE) T1-weighted images (WI) in predicting the therapeutic response to chemoradiotherapy (CRT) in patients diagnosed with muscle-invasive bladder cancer (MIBC). Methods: Forty-three patients with non-metastatic MIBC (cT2–4N0M0) who underwent partial or radical cystectomy after induction CRT were, retrospectively, reviewed. Pathological complete response (pCR) to CRT was defined as the absence of residual viable tumor cells in the cystectomy specimen. Identical volumes of interest corresponding to the index bladder cancer lesions on CE- and NE-T1WI on pre-therapeutic 1.5-T MRI were collaboratively delineated by one radiologist and one urologist. Texture analysis was performed using “LIFEx” software. The subtraction of radiological features between CE- and NE-T1WI yielded 112 delta-radiomics features, which were utilized in multiple machine-learning algorithms to construct optimal predictive models for CRT responsiveness. Additionally, the predictive performance of the radiomics model constructed using CE-T1WI alone was assessed. Results: Twenty-one patients (49%) achieved pCR. The best-performing delta-radiomics model, employing the “Extreme Gradient Boosting” algorithm, yielded an area under the receiver operating characteristic curve (AUC) of 0.85 (95% confidence interval [CI]: 0.75–0.95), utilizing four signal intensity-based delta-radiomics features. This outperformed the best model derived from CE-T1WI alone (AUC: 0.63, 95% CI: 0.50–0.75), which incorporated two morphological features and one signal intensity-based radiomics feature. Conclusions: Delta-radiomics analysis applied to pre-therapeutic CE- and NE-MRI demonstrated promising predictive ability for CRT responsiveness prior to treatment initiation. Full article
(This article belongs to the Special Issue Diagnosis and Prognosis of Urological Diseases)
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14 pages, 3121 KB  
Article
Application of Radiomics in Predicting the Prognosis of Medulloblastoma in Children
by Jiashu Chen, Wei Yang, Zesheng Ying, Ping Yang, Yuting Liang, Chen Liang, Baojin Shang, Hong Zhang, Yingjie Cai, Xiaojiao Peng, Hailang Sun, Wenping Ma and Ming Ge
Children 2025, 12(3), 387; https://doi.org/10.3390/children12030387 - 20 Mar 2025
Viewed by 890
Abstract
Background and Purpose: Medulloblastoma (MB) represents the predominant intracranial neoplasm observed in pediatric populations, characterized by a five-year survival rate ranging from 60% to 80%. Anticipating the prognostic outcome of medulloblastoma in children prior to surgical intervention holds paramount significance for informing treatment [...] Read more.
Background and Purpose: Medulloblastoma (MB) represents the predominant intracranial neoplasm observed in pediatric populations, characterized by a five-year survival rate ranging from 60% to 80%. Anticipating the prognostic outcome of medulloblastoma in children prior to surgical intervention holds paramount significance for informing treatment modalities effectively. Radiomics has emerged as a pervasive tool in both prognostic anticipation and therapeutic management across diverse tumor spectra. This study aims to develop a radiomics-based prediction model for the prognosis of children with MB and to validate the contribution of radiomic features in predicting the prognosis of MB when combined with clinical features. Materials and Methods: Patients diagnosed with medulloblastoma at our hospital from December 2012 to March 2022 were randomly divided into a training cohort (n = 40) and a test cohort (n = 41). Regions of interest (ROIs) were manually drawn on T1-weighted images (T1WI) along the boundary of the tumor, and radiomic features were extracted. Radiomic features related to survival prognosis were selected and used to construct a radiomics model. The patients were classified into two different risk stratifications according to the Risk-score calculated from the radiomics model. The log-rank test was used to test the difference in survival between the two stratifications to verify the classification value of the radiomics model. Clinical features related to the prognosis were used to construct a clinical model or clinical–radiomics model together with the radiomic features. Then, the clinical model, radiomics model, and clinical–radiomics model were compared to validate the improvement of radiomics in predicting the prognosis of medulloblastoma. The performance of the three models was evaluated with the C-index and the time-dependent AUC. Overall survival (OS) was defined as the time from receiving the operation to death or last follow-up. Results: A total of 81 children were included in this study. A total of five prognostic radiomic features were selected. The radiomics model could discriminate different risk hierarchies with good performance power in the training and testing datasets (training set p= 0.0009; test set p = 0.0286). Six clinical features associated with prognosis (duration of disease, risk hierarchy, dissemination, radiology, chemotherapy, and last postoperative white blood cell (WBC) level in CSF) were selected. The radiomic–clinical molecular features had better predictive value for OS (C-index = 0.860; Brier score: 0.087) than the radiomic features (C-index = 0.762; Brier score: 0.073) or clinical molecular characteristics (C-index = 0.806; Brier score: 0.092). Conclusions: Radiomic features based on T1-weighted imaging have predictive value for pediatric medulloblastoma. Radiomics has incremental value in predicting the prognosis of MB, and clinical–radiomics models have a better predictive effect than clinical models. Full article
(This article belongs to the Section Pediatric Surgery)
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13 pages, 1533 KB  
Article
Development and Validation of an MRI-Based Brain Volumetry Model Predicting Poor Psychomotor Outcomes in Preterm Neonates
by Joonsik Park, Jungho Han, In Gyu Song, Ho Seon Eun, Min Soo Park, Beomseok Sohn and Jeong Eun Shin
J. Clin. Med. 2025, 14(6), 1996; https://doi.org/10.3390/jcm14061996 - 15 Mar 2025
Viewed by 1004
Abstract
Background/Objectives: Infant FreeSurfer was introduced to address robust quantification and segmentation in the infant brain. The purpose of this study is to develop a new model for predicting the long-term neurodevelopmental outcomes of very low birth weight preterm infants using automated volumetry [...] Read more.
Background/Objectives: Infant FreeSurfer was introduced to address robust quantification and segmentation in the infant brain. The purpose of this study is to develop a new model for predicting the long-term neurodevelopmental outcomes of very low birth weight preterm infants using automated volumetry extracted from term-equivalent age (TEA) brain MRIs, diffusion tensor imaging, and clinical information. Methods: Preterm infants hospitalized at Severance Children’s Hospital, born between January 2012 and December 2019, were consecutively enrolled. Inclusion criteria included infants with birth weights under 1500 g who underwent both TEA MRI and Bayley Scales of Infant and Toddler Development, Second Edition (BSID-II), assessments at 18–24 months of corrected age (CA). Brain volumetric information was derived from Infant FreeSurfer using 3D T1WI of TEA MRI. Mean and standard deviation of fractional anisotropy of posterior limb of internal capsules were measured. Demographic information and comorbidities were used as clinical information. Study cohorts were split into training and test sets with a 7:3 ratio. Random forest and logistic regression models were developed to predict low Psychomotor Development Index (PDI < 85) and low Mental Development Index (MDI < 85), respectively. Performance metrics, including the area under the receiver operating curve (AUROC), accuracy, sensitivity, precision, and F1 score, were evaluated in the test set. Results: A total of 150 patient data were analyzed. For predicting low PDI, the random forest classifier was employed. The AUROC values for models using clinical variables, MR volumetry, and both clinical variables and MR volumetry were 0.8435, 0.7281, and 0.9297, respectively. To predict low MDI, a logistic regression model was chosen. The AUROC values for models using clinical variables, MR volumetry, and both clinical variables and MR volumetry were 0.7483, 0.7052, and 0.7755, respectively. The model incorporating both clinical variables and MR volumetry exhibited the highest AUROC values for both PDI and MDI prediction. Conclusions: This study presents a promising new prediction model utilizing an automated volumetry algorithm to distinguish long-term psychomotor developmental outcomes in preterm infants. Further research and validation are required for its clinical application. Full article
(This article belongs to the Section Clinical Pediatrics)
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14 pages, 1342 KB  
Article
Distinguishing Low Expression Levels of Human Epidermal Growth Factor Receptor 2 in Breast Cancer: Insights from Qualitative and Quantitative Magnetic Resonance Imaging Analysis
by Yiyuan Shen, Xu Zhang, Jinlong Zheng, Simin Wang, Jie Ding, Shiyun Sun, Qianming Bai, Caixia Fu, Junlong Wang, Jing Gong, Chao You and Yajia Gu
Tomography 2025, 11(3), 31; https://doi.org/10.3390/tomography11030031 - 10 Mar 2025
Viewed by 1508
Abstract
Background: The discovery of novel antibody–drug conjugates for low-expression human epidermal growth factor receptor 2 (HER2-low) breast cancer highlights the inadequacy of the conventional binary classification of HER2 status as either negative or positive. Identification of HER2-low breast cancer is crucial for selecting [...] Read more.
Background: The discovery of novel antibody–drug conjugates for low-expression human epidermal growth factor receptor 2 (HER2-low) breast cancer highlights the inadequacy of the conventional binary classification of HER2 status as either negative or positive. Identification of HER2-low breast cancer is crucial for selecting patients who may benefit from targeted therapies. This study aims to determine whether qualitative and quantitative magnetic resonance imaging (MRI) features can effectively reflect low-HER2-expression breast cancer. Methods: Pre-treatment breast MRI images from 232 patients with pathologically confirmed breast cancer were retrospectively analyzed. Both clinicopathologic and MRI features were recorded. Qualitative MRI features included Breast Imaging Reporting and Data System (BI-RADS) descriptors from dynamic contrast-enhanced MRI (DCE-MRI), as well as intratumoral T2 hyperintensity and peritumoral edema observed in T2-weighted imaging (T2WI). Quantitative features were derived from diffusion kurtosis imaging (DKI) using multiple b-values and included statistics such as mean, median, 5th and 95th percentiles, skewness, kurtosis, and entropy from apparent diffusion coefficient (ADC), Dapp, and Kapp histograms. Differences in clinicopathologic, qualitative, and quantitative MRI features were compared across groups, with multivariable logistic regression used to identify significant independent predictors of HER2-low breast cancer. The discriminative power of MRI features was assessed using receiver operating characteristic (ROC) curves. Results: HER2 status was categorized as HER2-zero (n = 60), HER2-low (n = 91), and HER2-overexpressed (n = 81). Clinically, estrogen receptor (ER), progesterone receptor (PR), hormone receptor (HR), and Ki-67 levels significantly differed between the HER2-low group and others (all p < 0.001). In MRI analyses, intratumoral T2 hyperintensity was more prevalent in HER2-low cases (p = 0.009, p = 0.008). Mass lesions were more common in the HER2-zero group than in the HER2-low group (p = 0.038), and mass shape (p < 0.001) and margin (p < 0.001) significantly varied between the HER2 groups, with mass shape emerging as an independent predictive factor (HER2-low vs. HER2-zero: p = 0.010, HER2-low vs. HER2-over: p = 0.012). Qualitative MRI features demonstrated an area under the curve (AUC) of 0.763 (95% confidence interval [CI]: 0.667–0.859) for distinguishing HER2-low from HER2-zero status. Quantitative features showed distinct differences between HER2-low and HER2-overexpression groups, particularly in non-mass enhancement (NME) lesions. Combined variables achieved the highest predictive accuracy for HER2-low status, with an AUC of 0.802 (95% CI: 0.701–0.903). Conclusions: Qualitative and quantitative MRI features offer valuable insights into low-HER2-expression breast cancer. While qualitative features are more effective for mass lesions, quantitative features are more suitable for NME lesions. These findings provide a more accessible and cost-effective approach to noninvasively identifying patients who may benefit from targeted therapy. Full article
(This article belongs to the Special Issue Imaging in Cancer Diagnosis)
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20 pages, 6430 KB  
Article
Usefulness of Deep Learning Techniques Using Magnetic Resonance Imaging for the Diagnosis of Meningioma and Atypical Meningioma
by Jun-Ho Hwang, Seung Hoon Lim and Chang Kyu Park
Information 2025, 16(3), 188; https://doi.org/10.3390/info16030188 - 28 Feb 2025
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Abstract
This study aimed to implement an artificial intelligence (AI) model capable of diagnosing meningioma and atypical meningioma during deep learning using magnetic resonance imaging (MRI). The experimental method was to acquire MRI scans of meningiomas and atypical meningiomas using the T2 weighted imaging [...] Read more.
This study aimed to implement an artificial intelligence (AI) model capable of diagnosing meningioma and atypical meningioma during deep learning using magnetic resonance imaging (MRI). The experimental method was to acquire MRI scans of meningiomas and atypical meningiomas using the T2 weighted imaging (T2WI), T1 weighted imaging (T1WI), contrast enhanced T1WI (CE-T1WI), and contrast enhanced fluid attenuated inversion recovery (CE-FLAIR) methods. The MRI results, according to each method, were categorized into two classes for diagnosing either meningioma or atypical meningioma. The CE-FLAIR images tended to have lower learning performance compared to other methods, but all methods showed excellent diagnostic performance. We confirmed that deep learning is a useful method for diagnosing meningioma and atypical meningioma. When using MRI, if the accuracy and loss rate are improved by applying deep learning optimized for medical images, it will be possible to implement a brain tumor diagnosis model with better learning performance. Full article
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15 pages, 5248 KB  
Article
Multiparametric Magnetic Resonance Imaging Findings of the Pancreas: A Comparison in Patients with Type 1 and 2 Diabetes
by Mayumi Higashi, Masahiro Tanabe, Katsuya Tanabe, Shigeru Okuya, Koumei Takeda, Yuko Nagao and Katsuyoshi Ito
Tomography 2025, 11(2), 16; https://doi.org/10.3390/tomography11020016 - 7 Feb 2025
Viewed by 2451
Abstract
Background/Objectives: Diabetes-related pancreatic changes on MRI remain unclear. Thus, we evaluated the pancreatic changes on MRI in patients with both type 1 diabetes (T1D) and type 2 diabetes (T2D) using multiparametric MRI. Methods: This prospective study involved patients with T1D or T2D who [...] Read more.
Background/Objectives: Diabetes-related pancreatic changes on MRI remain unclear. Thus, we evaluated the pancreatic changes on MRI in patients with both type 1 diabetes (T1D) and type 2 diabetes (T2D) using multiparametric MRI. Methods: This prospective study involved patients with T1D or T2D who underwent upper abdominal 3-T MRI. Additionally, patients without impaired glucose metabolism were retrospectively included as a control. The imaging data included pancreatic anteroposterior (AP) diameter, pancreas-to-muscle signal intensity ratio (SIR) on fat-suppressed T1-weighted image (FS-T1WI), apparent diffusion coefficient (ADC) value, T1 value on T1 map, proton density fat fraction (PDFF), and mean secretion grade of pancreatic juice flow on cine-dynamic magnetic resonance cholangiopancreatography (MRCP). The MR measurements were compared using one-way analysis of variance and the Kruskal–Wallis test. Results: Sixty-one patients with T1D (n = 7) or T2D (n = 54) and 21 control patients were evaluated. The pancreatic AP diameters were significantly smaller in patients with T1D than in patients with T2D (p < 0.05). The average SIR on FS-T1WI was significantly lower in patients with T1D than in controls (p < 0.001). The average ADC and T1 values of the pancreas were significantly higher in patients with T1D than in patients with T2D (p < 0.01) and controls (p < 0.05). The mean secretion grade of pancreatic juice flow was significantly lower in patients with T1D than in controls (p = 0.019). The average PDFF of the pancreas was significantly higher in patients with T2D than in controls (p = 0.029). Conclusions: Patients with T1D had reduced pancreas size, increased pancreatic T1 and ADC values, and decreased pancreatic juice flow on cine-dynamic MRCP, whereas patients with T2D had increased pancreatic fat content. Full article
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