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39 pages, 3122 KB  
Review
Designing Multifunctional Antibacterial Hydrogels: A Tri-Pillar Approach Based on Bacteriophages, Hydroxyapatite, and Electrospun Systems
by Jordi Puiggalí
Gels 2026, 12(4), 335; https://doi.org/10.3390/gels12040335 (registering DOI) - 17 Apr 2026
Abstract
The rapid emergence of antibiotic-resistant bacteria represents one of the most critical challenges in modern healthcare and has stimulated intense research into alternative antimicrobial strategies. Antibacterial hydrogels have emerged as versatile biomaterials due to their high water content, tunable physicochemical properties, and ability [...] Read more.
The rapid emergence of antibiotic-resistant bacteria represents one of the most critical challenges in modern healthcare and has stimulated intense research into alternative antimicrobial strategies. Antibacterial hydrogels have emerged as versatile biomaterials due to their high water content, tunable physicochemical properties, and ability to function as multifunctional platforms for drug delivery and tissue regeneration. This review analyzes recent advances in antibacterial hydrogel systems through a conceptual framework based on three complementary pillars: biological antibacterial agents, inorganic functional components, and structural material engineering. Biological strategies, particularly bacteriophage-based approaches, provide highly specific antibacterial activity capable of targeting multidrug-resistant pathogens and disrupting bacterial biofilms. Inorganic components such as hydroxyapatite nanoparticles contribute additional functionalities including drug adsorption, modulation of the ionic microenvironment, and osteoconductive behavior relevant for bone-related infections. Structural design strategies based on electrospinning enable the fabrication of fibrous architectures that enhance mechanical stability, regulate therapeutic release, and mimic extracellular matrix organization. The integration of these three pillars within multifunctional hydrogel platforms offers promising opportunities for developing advanced antibacterial biomaterials capable of addressing infection control while supporting tissue regeneration. Full article
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20 pages, 2363 KB  
Article
Rapid Optical Nanomotion-Based Antibiotic Susceptibility Testing of Kombucha-Associated Acetic Acid Bacteria and Escherichia coli
by Meritxell Moreno Córdoba, Vjera Radonicic, Sandor Kasas and Ronnie G. Willaert
Foods 2026, 15(8), 1395; https://doi.org/10.3390/foods15081395 - 16 Apr 2026
Abstract
Antimicrobial resistance in microorganisms associated with fermented foods is increasingly recognized, yet rapid methods to characterize antibiotic response dynamics remain limited. This study evaluates antibiotic susceptibility and physiological response patterns of kombucha-associated acetic acid bacteria and motile Escherichia coli using optical nanomotion detection [...] Read more.
Antimicrobial resistance in microorganisms associated with fermented foods is increasingly recognized, yet rapid methods to characterize antibiotic response dynamics remain limited. This study evaluates antibiotic susceptibility and physiological response patterns of kombucha-associated acetic acid bacteria and motile Escherichia coli using optical nanomotion detection (ONMD), a label-free technique that quantifies single-cell mechanical activity. Two cellulose-producing species (Komagataeibacter xylinus and K. rhaeticus), one non-cellulose-producing species (K. melaceti), and E. coli were exposed to ampicillin, ciprofloxacin, and chloramphenicol. Minimum inhibitory concentrations (MICs) were determined prior to time-resolved ONMD analysis. Susceptible strains exhibited progressive suppression of confined nanomotion consistent with MIC-defined susceptibility, whereas resistant profiles maintained sustained mechanical activity. Chloramphenicol initially induced persistent or increased nanomotion at 120 min; however, extending the observation to 180 min revealed delayed suppression in susceptible strains, demonstrating that bacteriostatic antibiotics require longer observation windows for accurate ONMD classification. In motile E. coli, ONMD revealed both intracellular nanomotion puncta and swimming trajectories, which were progressively attenuated following antibiotic exposure. These findings demonstrate that ONMD complements conventional susceptibility testing by resolving time-dependent suppression of both translational motility and intracellular nanomechanical activity at the single-cell level. Full article
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14 pages, 573 KB  
Article
Multifunctional Peptides from Equine Milk Lactoferrin: Evaluation of Antimicrobial Activity In Silico and In Vitro
by Meiramkul Narmuratova, Shara Atambayeva, Gulzhan Kaiyrmanova, Saltanat Orazova, Gulzhan Narmuratova and Bernard Faye
Animals 2026, 16(8), 1223; https://doi.org/10.3390/ani16081223 (registering DOI) - 16 Apr 2026
Abstract
The rapid global spread of antimicrobial resistance among pathogenic microorganisms poses a serious challenge to both human and animal health, underscoring the urgent need for new strategies to combat resistance. Antimicrobial peptides (AMPs), key components of the innate immune system, are promising candidates [...] Read more.
The rapid global spread of antimicrobial resistance among pathogenic microorganisms poses a serious challenge to both human and animal health, underscoring the urgent need for new strategies to combat resistance. Antimicrobial peptides (AMPs), key components of the innate immune system, are promising candidates because they disrupt the membranes of bacteria, fungi, and viruses, thereby reducing the risk of resistance development. Lactoferrin (LF), a multifunctional iron-binding glycoprotein abundant in mammalian milk, is a rich source of AMPs. Cationic peptide fragments such as lactoferricin and lactoferrampin exhibit more potent direct antimicrobial activity than the intact protein. Our previous studies have shown that peptides derived from Equine milk lactoferrin exhibit antihypertensive, anti-inflammatory, and anti-oncogenic activity in silico, highlighting their multifunctional bioactive potential. Building on these results, the present study aims to investigate the antimicrobial properties of these peptides. We used an integrated approach combining computer modeling and in vitro studies to identify and validate novel antimicrobial peptides from equine milk lactoferrin. Bioinformatics tools, including AMPScanner and CAMP, were used to predict antimicrobial domains, followed by experimental testing against Escherichia coli, Staphylococcus aureus, and Pseudomonas aeruginosa. The results showed that equine milk lactoferrin peptides possess potent and selective antimicrobial activity, with efficacy varying across bacterial species. These data expand the functional profile of lactoferrin-derived peptides, demonstrating their multifunctionality, and suggest that equine milk lactoferrin represents a promising natural source of antimicrobial agents, supporting alternative strategies to reduce antibiotic use in human and veterinary medicine. Full article
(This article belongs to the Section Equids)
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32 pages, 1953 KB  
Review
Electrospinning of Natural Polymeric Fibers with Essential Oils for the Control of Multidrug-Resistant Pathogens
by Deysi Alejandrina Cabrera Segura, Verónica Santacruz Vázquez, Sandra Mendoza, Santa Toxqui-López, Paulina Arellanes-Lozada and Claudia Santacruz Vázquez
Polymers 2026, 18(8), 972; https://doi.org/10.3390/polym18080972 - 16 Apr 2026
Abstract
Antimicrobial resistance (AMR) represents one of the major threats to global health, driven by the indiscriminate use of antibiotics and decline in the development of new therapeutic agents. In this context, essential oils (EOs) have emerged as innovative natural alternatives due to their [...] Read more.
Antimicrobial resistance (AMR) represents one of the major threats to global health, driven by the indiscriminate use of antibiotics and decline in the development of new therapeutic agents. In this context, essential oils (EOs) have emerged as innovative natural alternatives due to their broad-spectrum antimicrobial activity and low potential to induce bacterial resistance. However, their clinical application is limited by their volatility, low chemical stability, and rapid degradation. The incorporation of EOs into electrospun natural polymer fibers has emerged as an effective strategy to overcome these limitations, improving their stability, enabling controlled release, and enhancing their antimicrobial efficiency. This review focuses on the use of electrospun natural polymers for biomedical applications, highlighting their biocompatibility, biodegradability, and ability to mimic the extracellular matrix, thereby promoting cell interaction. Additionally, their high surface area and porous structure facilitate efficient encapsulation and controlled release of bioactive compounds. Recent advances in the development of these systems against clinically relevant multidrug-resistant pathogens are analyzed, along with the antimicrobial mechanisms of EOs. Finally, the factors influencing encapsulation and release efficiency, as well as the main challenges and future perspectives for clinical translation, are discussed. Full article
(This article belongs to the Special Issue Recent Advances in Electrospun Polymer Nanofibers)
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17 pages, 634 KB  
Review
Hypericin-Mediated Antimicrobial Photodynamic Therapy in Dentistry: A Systematic Review of Applications Against Oral Biofilms and Infections
by Radosław Turski, Maciej Dobrzyński, Aleksandra Warakomska, Magdalena Pietrzko, Iwona Gregorczyk-Maga, Dariusz Skaba and Rafał Wiench
Pharmaceutics 2026, 18(4), 491; https://doi.org/10.3390/pharmaceutics18040491 - 16 Apr 2026
Abstract
Background: Oral biofilms are a major etiological factor in dental caries, periodontal disease, peri-implantitis, and endodontic infections. Increasing antimicrobial resistance and the limitations of conventional therapies have intensified interest in antimicrobial photodynamic therapy (aPDT). Hypericin, a natural photosensitizer derived from Hypericum perforatum, [...] Read more.
Background: Oral biofilms are a major etiological factor in dental caries, periodontal disease, peri-implantitis, and endodontic infections. Increasing antimicrobial resistance and the limitations of conventional therapies have intensified interest in antimicrobial photodynamic therapy (aPDT). Hypericin, a natural photosensitizer derived from Hypericum perforatum, demonstrates potent reactive oxygen species generation and broad antimicrobial activity; however, its dental applications remain insufficiently synthesized. Objective: To systematically evaluate the antimicrobial efficacy, treatment parameters, safety, and clinical potential of hypericin-mediated aPDT against oral biofilms and infections in dentistry. Methods: This systematic review was conducted according to PRISMA 2020 and registered in PROSPERO CRD42024617727. Electronic searches of PubMed/MEDLINE, Embase, Scopus, and the Cochrane Library (January 2010 to December 2025) were performed. Studies assessing hypericin-mediated aPDT in oral or dental contexts were included. Methodological quality was evaluated using a predefined nine-domain risk-of-bias tool. Results: Eleven studies met the inclusion criteria. Hypericin-mediated aPDT demonstrated strong antimicrobial effects, achieving up to 99% planktonic inactivation and significant biofilm reduction across bacterial and fungal species. Activity was particularly pronounced against Gram-positive organisms, including Staphylococcus aureus and Enterococcus faecalis. However, efficacy against mature biofilms was variable and often dependent on formulation and irradiation parameters. Most studies showed moderate methodological quality, with frequent deficiencies in reporting light calibration and dosimetry. Advanced delivery systems, including liposomal and nanoparticle formulations, improved photodynamic performance. Conclusions: Hypericin-mediated aPDT shows promising antimicrobial activity against oral pathogens and biofilms, with favorable selectivity and safety profiles. Nevertheless, the evidence remains predominantly preclinical and heterogeneous. Standardized protocols and well-designed clinical trials are required before routine dental implementation can be recommended. Full article
(This article belongs to the Section Clinical Pharmaceutics)
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18 pages, 2840 KB  
Article
AUBFM01 Phage as a Therapeutic Candidate Against MDR Acinetobacter baumannii: Characterization, and Immune-Aware Profiling
by Dina Kabbara, Layane Nakib, Zahraa Shokor, Tasnime A. Abdo Ahmad, May F. Mrad, Ghassan G. Matar and Esber S. Saba
Microorganisms 2026, 14(4), 903; https://doi.org/10.3390/microorganisms14040903 - 16 Apr 2026
Abstract
Multidrug-resistant Acinetobacter baumannii is a major nosocomial pathogen for which bacteriophages are being explored as alternative antibacterial agents. In this study, we isolated and characterized AUBFM01, a lytic phage active against MDR A. baumannii, and performed an initial assessment of its interaction [...] Read more.
Multidrug-resistant Acinetobacter baumannii is a major nosocomial pathogen for which bacteriophages are being explored as alternative antibacterial agents. In this study, we isolated and characterized AUBFM01, a lytic phage active against MDR A. baumannii, and performed an initial assessment of its interaction with PMA-differentiated THP-1 macrophages. AUBFM01 was evaluated by host range testing, adsorption and one-step growth assays, lytic activity, stability testing, biofilm disruption, whole-genome sequencing, and flow cytometry-based macrophage profiling. The phage showed rapid adsorption, a short latent period of approximately 30 min, and a burst size of about 165 phage particles per infected cell. It remained stable under moderate temperature and near-neutral pH conditions and significantly reduced preformed A. baumannii biofilm biomass in vitro. Genomic analysis identified a 41,354-bp double-stranded DNA genome lacking detectable lysogeny-associated genes, antibiotic resistance determinants, and known bacterial virulence factors. In THP-1 macrophages, AUBFM01 exposure was associated with reduced cell viability and with enrichment of a resting/intermediate-like CD86-defined phenotype among the remaining cells, including after endotoxin reduction. These findings identify AUBFM01 as a lytic anti-Acinetobacter phage with antibiofilm activity and notable macrophage-associated effects that warrant further mechanistic and safety investigation. Full article
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28 pages, 6545 KB  
Article
Seasonal Dynamics of Skin Microbiota and Metabolites in Transhumant-Grazed Altay Sheep
by Xin Li, Zihang Qin, Haiyan Wang, Xinyu Tao, Jiangtao Xia, Yukang Zhao, Pengfei Yi, Yunxiao Ma, Xinhao Wang, Xuelian Ma, Na Li, Qi Zhong and Gang Yao
Microorganisms 2026, 14(4), 901; https://doi.org/10.3390/microorganisms14040901 - 16 Apr 2026
Abstract
To explore the seasonal variation patterns of the skin microecology of Altay sheep under transhumant grazing conditions, skin swabs were collected from 60 free-grazing Altay sheep at seasonal transition nodes in the Altay region. Metagenomic sequencing combined with untargeted metabolomics was used to [...] Read more.
To explore the seasonal variation patterns of the skin microecology of Altay sheep under transhumant grazing conditions, skin swabs were collected from 60 free-grazing Altay sheep at seasonal transition nodes in the Altay region. Metagenomic sequencing combined with untargeted metabolomics was used to characterize their bacterial community structure, functional pathways, and metabolite profiles. The results showed that the skin microecology of Altay sheep presented obvious seasonal variation patterns. In spring, 35 of the 39 highly abundant bacteria were environmentally derived, five proliferation-related pathways were significantly enriched, and the levels of five metabolites associated with microbial community regulation and skin barrier defense were elevated. In summer, the abundance of three skin symbiotic bacteria increased, the activities of eight pathways mainly related to biofilm formation were significantly enhanced, and the contents of five metabolites primarily associated with membrane lipid homeostasis and selective bacteriostasis increased. In autumn, the abundances of nine radiation-resistant and cold-tolerant strains increased, together with the elevated abundance of two opportunistic pathogens; five repair-related pathways were active, and the levels of four anti-inflammatory and repair-associated metabolites were synchronously increased. In winter, the abundance of two cold-tolerant strains increased, the activities of pathways related to nitrogen metabolism and energy synthesis were enhanced, and one lignan compound was identified as the key metabolite. These findings elucidate the seasonal dynamic patterns of the skin microecology of Altay sheep and provide a theoretical basis for research on the adaptive mechanisms and seasonal health management of Altay sheep and other sheep in alpine regions. Full article
(This article belongs to the Section Veterinary Microbiology)
14 pages, 1367 KB  
Article
Study on the Non-Target Metabolomics Effects of Tylosin on Pasteurella multocida
by Ting Zhang, Junhao Xiang, Yaoxin Tang, Xiubo Li and Yiming Liu
Vet. Sci. 2026, 13(4), 386; https://doi.org/10.3390/vetsci13040386 - 16 Apr 2026
Abstract
Pasteurella multocida (P. multocida) is not only the core pathogen of bovine respiratory disease (BRDC) but also a significant zoonotic agent, posing a dual threat to global animal husbandry and public health. This study utilized untargeted metabolomics to systematically dissect the [...] Read more.
Pasteurella multocida (P. multocida) is not only the core pathogen of bovine respiratory disease (BRDC) but also a significant zoonotic agent, posing a dual threat to global animal husbandry and public health. This study utilized untargeted metabolomics to systematically dissect the metabolic regulatory network of P. multocida in response to tylosin within a One Health framework. The results revealed significant “defense–growth” metabolic reprogramming: activation of amino sugar and nucleotide sugar pathways (e.g., CDP-glucose) indicated cell wall remodeling, while directional shifts in the phenylalanine–tyrosine network directed flux toward defensive secondary metabolites. Concurrently, amino acid disorders and the overactivation of the ABC transporter system exacerbated an internal energy crisis, characterized by a shift from respiration to glycolysis, ATP depletion, and ROS accumulation. SEM observations confirmed membrane integrity disruption and cytoplasmic leakage. Crucially, this metabolic stress and the transition into a “persister-like” dormant state are closely linked to the adaptive expression of antimicrobial resistance (AMR) genes. Under the selective pressure of tylosin, these metabolic perturbations may facilitate the emergence and horizontal transfer of resistance determinants, which can circulate through the animal–human–environment interface. By revealing the metabolic physiological basis of tylosin’s action and its role in inducing bacterial tolerance, this study provides critical theoretical insights for antimicrobial stewardship, aiming to mitigate the risk of AMR transmission and preserve the efficacy of macrolides for both veterinary and human medicine. Full article
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22 pages, 4238 KB  
Article
Bacillus velezensis LW-66: A Broad-Spectrum Biocontrol Agent Against Apple Tree Canker and Other Plant Fungal Diseases
by Dandan Liu, Wei Xiao, Wenwen Li, Shengli Li, Juanli Cheng and Jinshui Lin
Microorganisms 2026, 14(4), 889; https://doi.org/10.3390/microorganisms14040889 - 16 Apr 2026
Abstract
Plant fungal diseases, such as apple tree canker caused by Valsa mali, have caused severe losses in agricultural production. Traditional chemical fungicides induce drug resistance in pathogens and cause environmental pollution. Therefore, it is of substantial importance to screen efficient and environmentally [...] Read more.
Plant fungal diseases, such as apple tree canker caused by Valsa mali, have caused severe losses in agricultural production. Traditional chemical fungicides induce drug resistance in pathogens and cause environmental pollution. Therefore, it is of substantial importance to screen efficient and environmentally friendly bacterial strains as potential biocontrol agents. The tea rhizosphere harbors abundant microbial resources, and previous research has identified microorganisms with antifungal activity existing in this environment. Therefore, in this study, we isolated antagonistic bacteria with broad-spectrum biocontrol potential from tea rhizosphere soil. In this study, a strain with strong antagonistic activity against V. mali was isolated from tea rhizosphere soil. Based on morphological characteristics, 16S rRNA gene sequencing, and whole-genome analysis, the isolated strain was identified as Bacillus velezensis and designated as LW-66. This strain demonstrated broad-spectrum antifungal activity against various plant pathogenic fungi, including Valsa mali, Fusarium graminearum, Bipolaris sorokinianum, Alternaria solani, and Exserohilum turcicum. The active extract of B. velezensis maintained strong stability across a wide range of temperatures (25–90 °C) and pH values (2–8), with stability decreasing only when the temperature reached 100 °C or pH ≥ 10. In a preventive assay using detached apple branches inoculated with V. mali, the control efficacy of LW-66 against apple tree canker reached more than 90%. Additionally, in a therapeutic assay using V. mali-infected potted apple seedlings, the LW-66 bone-glue bacterial agent achieved a survival rate of up to 90%. Whole-genome analysis revealed that the genome of LW-66 contains 13 predicted secondary metabolite biosynthetic gene clusters, seven of which showed high homology (≥92% similarity) with known antimicrobial gene clusters, including surfactin, bacillaene, macrolactin H, fengycin, difficidin, bacillibactin, and bacilysin. These gene clusters may be connected to the broad-spectrum antifungal activity of B. velezensis, as well as its ability to disrupt hyphal morphology. The volatile organic compounds produced by LW-66 inhibited V. mali growth by 91.70%. Collectively, these findings demonstrate that B. velezensis LW-66 has a wide antimicrobial range and strong antagonistic effects against multiple plant pathogenic fungi. Therefore, B. velezensis shows promise as a biocontrol agent for managing fungal diseases in plants, providing a basis for developing LW-66-derived biocontrol products aimed at controlling diseases such as apple tree canker. Full article
(This article belongs to the Special Issue Advances in Fungal Plant Pathogens: Diagnosis, Resistance and Control)
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19 pages, 1395 KB  
Article
Carbon Dots and Their Functionalization with Photosensitizer Chlorin E6: Advancing Antibacterial Efficacy Through Enhanced Photodynamic Effects
by Siqi Wang, Colin P. McCoy, Peifeng Li, Yining Li, Yinghan Zhao, Gavin P. Andrews and Yi Ge
Pharmaceutics 2026, 18(4), 487; https://doi.org/10.3390/pharmaceutics18040487 - 15 Apr 2026
Abstract
Background/Objectives: Carbon dots (CDs) are promising antimicrobial nanomaterials owing to their biocompatibility, environmental friendliness, and tunable surface chemistry. This study aimed to synthesize nitrogen-doped CDs (AS-CDs) and develop a light-responsive antibacterial system through conjugation with chlorin e6 (Ce6). Methods: AS-CDs were [...] Read more.
Background/Objectives: Carbon dots (CDs) are promising antimicrobial nanomaterials owing to their biocompatibility, environmental friendliness, and tunable surface chemistry. This study aimed to synthesize nitrogen-doped CDs (AS-CDs) and develop a light-responsive antibacterial system through conjugation with chlorin e6 (Ce6). Methods: AS-CDs were synthesized by a microwave-assisted method using L-ascorbic acid and spermidine, followed by conjugation with Ce6. The materials were characterized by transmission electron microscopy, zeta potential analysis, and spectroscopic methods, and their antibacterial activity was evaluated against Escherichia coli, Staphylococcus aureus, and methicillin-resistant S. aureus (MRSA) under both dark and visible-light conditions. Cytotoxicity was assessed using HaCaT cells. Results: The AS-CDs exhibited a uniform nanoscale morphology with an average diameter of 6.3 nm and a positive surface charge of +15.6 mV, together with intrinsic broad-spectrum antibacterial activity. Ce6 conjugation further enhanced antibacterial efficacy under light irradiation, with the CDs-Ce6 conjugate achieving complete eradication of S. aureus and MRSA and marked inhibition of E. coli at 2.5 μg/mL. Cytotoxicity studies demonstrated low toxicity in HaCaT cells within the effective antibacterial concentration range. Conclusions: These findings highlight the potential of microwave-synthesized, photosensitizer-conjugated CDs as next-generation antimicrobial agents. This platform offers a cost-effective, sustainable, eco-friendly, and efficient platform for combating bacterial infections, with broader potential in pharmaceutical and biomedical applications. Full article
16 pages, 1227 KB  
Article
Antimicrobial Resistance Profiles of Gram-Negative Bacteria Isolated from Saker Falcons (Falco cherrug) in Western Romania
by Daiana-Ionela Cocoș, Oana-Maria Boldura, Eugenia Dumitrescu, Răzvan-Tudor Pătrînjan, Florin Muselin, Diana Brezovan, Janos Degi and Romeo Teodor Cristina
Antibiotics 2026, 15(4), 400; https://doi.org/10.3390/antibiotics15040400 - 15 Apr 2026
Abstract
Background/Objectives: The Saker Falcon (Falco cherrug) is an endangered raptor species of ecological and conservation relevance. Despite its status, data regarding its microbiota and the prevalence of antimicrobial resistance (AMR) remain scarce, especially in Eastern Europe. This single-facility study aims [...] Read more.
Background/Objectives: The Saker Falcon (Falco cherrug) is an endangered raptor species of ecological and conservation relevance. Despite its status, data regarding its microbiota and the prevalence of antimicrobial resistance (AMR) remain scarce, especially in Eastern Europe. This single-facility study aims to investigate the phenotypic and genotypic AMR profiles of Gram-negative bacteria isolated from captive Saker Falcons in Western Romania. Methods: Freshly voided fecal droppings were collected non-invasively from 40 clinically healthy Saker Falcons. Bacterial identification was performed using selective media and the VITEK® 2 system. Antimicrobial susceptibility testing (AST) was conducted on a representative subset of 12 isolates. Selected resistance-associated genes were screened by conventional PCR. Results: Escherichia coli was the most prevalent 60% (n = 24/40), followed by Hafnia alvei 10% (n = 4/40) and Pseudomonas spp. 10% (n = 4/40). AST revealed phenotypic resistance among Enterobacteriaceae primarily to ampicillin 20% (n = 2/10), tetracycline 20% (n = 2/10), fluoroquinolones and sulfonamides 10% (n = 1/10), while susceptibility to imipenem 90% (n = 9/10) and gentamicin 90% (n = 9/10) remained high. The targeted resistance-associated genes were detected in selected phenotypically resistant isolates. PCR screening detected blaZ and ampC in 62.5% (n = 5/8) of tested isolates, blaOXA-61 in 37.5% (n = 3/8), blaOXA-51 in 25% (n = 2/8), tetK in 37.5% (n = 3/8), and gyrA in 12.5% (n = 1/8). The isolate used as the negative control, pansusceptible in AST, was confirmed negative for all targeted genes. Conclusions: This single-facility study provides baseline data on AMR traits in Gram-negative bacteria associated with Saker Falcons in Western Romania. Given the limited scale and isolate-based design of the study, the findings should be interpreted cautiously, but they support further investigation of wildlife-associated AMR within a One Health context. Full article
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21 pages, 7663 KB  
Article
Bioactive Secondary Metabolites and Anti-Infective Properties of Two Sordariomycetes Taxa Characterized by HR-ESI-MS Technique
by Fatma A. Abo Nouh, Ahmed M. Abdel-Azeem, Tamer S. Abdelmoneim, Nivien A. Nafady, Saeed Mohammadi, Najeeb Ur Rehman, Hassan Moghtaderi, Moosa Al Hamadani, Saif Al-Housni, Usama Qayum and Abdullah M. S. Al-Hatmi
Microbiol. Res. 2026, 17(4), 81; https://doi.org/10.3390/microbiolres17040081 - 15 Apr 2026
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Abstract
The emergence of antimicrobial resistance and the increasing incidence of cancer have highlighted the urgent need to develop new drugs; therefore, the discovery of new bioactive molecules is an important goal for future research. In this study, freshwater fungi isolated from submerged Phragmites [...] Read more.
The emergence of antimicrobial resistance and the increasing incidence of cancer have highlighted the urgent need to develop new drugs; therefore, the discovery of new bioactive molecules is an important goal for future research. In this study, freshwater fungi isolated from submerged Phragmites australis from Egypt were screened for antimicrobial and cytotoxic activities. Using ITS1 and ITS4 primers, eight frequently occurring Sordariomycetes taxa were identified and were then selected for further evaluation of bioactivity. Ethyl acetate crude extracts (A–H) were evaluated for antimicrobial activity using the agar disk-diffusion method. Extracts A and E, derived from Chaetomium globosum SCUF0000404 (PX596738) and Chaetomium madrasense SCUF0000401 (PX596735), respectively, showed broad-spectrum activity at 100 mg/mL against bacterial pathogens, including Staphylococcus aureus ATCC 29213 (15.33 and 18.00 mm), Streptococcus pyogenes ATCC 19615 (11.00 mm), Escherichia coli ATCC 35218 (10.33 and 10.67 mm), Klebsiella pneumoniae ATCC 700603 (14.00 and 16.67 mm), and Pseudomonas aeruginosa ATCC 27853 (13.33 and 16.33 mm), and show antifungal activity against Candida albicans ATCC 14053 (20.33 mm), Candida krusei ATCC 6258 (15.67 and 15.33 mm), Trichosporon asahii AMS 187 (17.00 and 17.67 mm), Exserohilum rostratum AMS 1077 (34.00 and 33.67 mm), and Trichophyton indotineae AMS 180 (38.33 and 34.00 mm). Selective cytotoxic effects on the breast cancer cell line MDA-MB-231 were observed by extracts A and E at IC50 = 309 and 277 μg/mL, while non-selective cytotoxic effects on the normal HUVEC cell line were found with IC50 = 919 and 796 μg/mL, respectively. Characterization of the most effective extracts A and E by high-resolution electrospray ionization mass spectrometry (HR-ESI-MS) shows that they have a wide range of secondary metabolites, including cytochalasans, azaphilone alkaloids, steroids, terpenoids, flavonoids, and phenols. These findings underscore the chemical diversity and therapeutic potential of freshwater fungi from Egypt. Full article
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23 pages, 1098 KB  
Article
Genetic and Phenotypic Characteristics of Five Staphylococcus aureus Strains Isolated from Yakutian Cattle
by Ksenia Fursova, Daria Nikanova, Sergei Sokolov, Daria Sherman, Olga Artem’eva, Evgenia Kolodina, Anna Tiurina, Anatoly Sorokin, Timur Dzhelyadin, Varvara Romanova, Margarita Shchannikova, Andrei Pochtovyi, Vladimir Gushchin, Artem Ermakov, Natalia Zinovieva and Fedor Brovko
Animals 2026, 16(8), 1189; https://doi.org/10.3390/ani16081189 - 14 Apr 2026
Viewed by 197
Abstract
To date, the problem of mastitis in cattle remains relevant for both the industrial sector and scientific research. Despite numerous active investigations, the causes of this disease have not been fully established. It is postulated that several factors may be involved, such as [...] Read more.
To date, the problem of mastitis in cattle remains relevant for both the industrial sector and scientific research. Despite numerous active investigations, the causes of this disease have not been fully established. It is postulated that several factors may be involved, such as bacterial pathogens, animal husbandry practices, and weather and climatic conditions. In this study, we selected cows from farms in Yakutia to investigate microbial isolates present in the milk of cows affected by mastitis and treated with antibiotics. Five identified Staphylococcus aureus isolates were investigated using whole-genome sequencing (Illumina sequencing and nanopore sequencing), followed by analysis of virulence factors in the genomes and cultural properties of the isolates. The profile of S. aureus virulence genes (exotoxins, cytotoxins, superantigen-like proteins, adhesins) was identified via WGS. Hemolysin gene (hla) was detected in all isolates. An investigation of the cultural properties of the isolates, specifically through hemolysis of rabbit erythrocytes and Western blot analysis of the culture liquid of S. aureus, revealed different expression levels of alpha-hemolysin among the strains. One isolate (17-21) exhibited the highest secretion level of about 320 ± 37 ng, both in the hemolysis test and immunoblotting assay. An investigation of the isolates’ antibiotic resistance showed that all isolates exhibited multidrug resistance, as confirmed by the presence of antibiotic resistance genes in these isolates. One isolate (7-7) exhibited the broadest range of phenotypic resistance and was resistant to all tested antibiotics (except clindamycin). Phylogenetic analysis suggested that the evolution of these isolates occurred independently in their respective ecological niches, although their transfer from cattle to humans, and vice versa, is possible. Isolates 7-7, 18-22, 33-40, and 35-42 are most typical to Yakutian cattle, while isolate 17-21 might have been introduced from a different region. To the best of our knowledge, this is the first in-depth study into a range of S. aureus isolates associated with mastitis infection in Yakutian cattle. Full article
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42 pages, 2137 KB  
Review
Detection to Disruption: A Comprehensive Review of Bacterial Biofilms and Therapeutic Advances
by Pranay Amruth Maroju, Angad S. Sidhu, Amogh R. Motaganahalli, Robert E. Minto, Fatih Zor, Christine Kelley-Patteson, Rahim Rahimi, Aladdin H. Hassanein and Mithun Sinha
Antibiotics 2026, 15(4), 396; https://doi.org/10.3390/antibiotics15040396 - 13 Apr 2026
Viewed by 542
Abstract
Bacterial biofilms are structured microbial communities enclosed within a self-produced extracellular polymeric substance matrix composed of polysaccharides, proteins, extracellular DNA, and lipids. This matrix promotes adhesion, structural stability, and the development of heterogeneous microenvironments that restrict antimicrobial penetration and shield bacteria from host [...] Read more.
Bacterial biofilms are structured microbial communities enclosed within a self-produced extracellular polymeric substance matrix composed of polysaccharides, proteins, extracellular DNA, and lipids. This matrix promotes adhesion, structural stability, and the development of heterogeneous microenvironments that restrict antimicrobial penetration and shield bacteria from host immune responses. As a result, biofilms are major contributors to chronic, recurrent, device-related, and difficult-to-treat infections, posing a major challenge for clinical management and antimicrobial stewardship. This review summarizes current understandings of biofilm biology, its clinical relevance, including the stages of biofilm development, the composition and protective roles of the matrix, and the physiological heterogeneity that arises during maturation. It also examines key mechanisms underlying biofilm tolerance and resistance, such as limited antibiotic diffusion, and sequestration, enzymatic inactivation, efflux pump upregulation, persister cell formation, and horizontal gene transfer. In addition, it highlights important clinical settings in which biofilms are implicated, including cystic fibrosis, chronic wounds, osteomyelitis, implant- or device-associated infections, and breast implant illness, in which persistent implant-associated biofilms and the resulting chronic inflammatory milieu have been hypothesized to contribute to local and systemic manifestations in a subset of patients. The review further discusses conventional and emerging approaches for biofilm detection alongwith real-time monitoring. Biofilm-associated infections remain difficult to eradicate because persistence is driven by multiple interconnected protective mechanisms. Effective management therefore requires integrated strategies that combine accurate detection with multifaceted therapies, including antibiotics alongside matrix-disrupting enzymes, quorum-sensing inhibitors, bacteriophages, metabolic reactivators, and nanotechnology-based delivery systems. Advances in multi-omics and system-level modeling will be essential for developing next-generation strategies to prevent, monitor, and treat biofilm-associated disease. Full article
(This article belongs to the Special Issue Microbial Biofilms: Identification, Resistance and Novel Drugs)
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Review
Microbial Genomic Consortia in Prostate Cancer: Mechanistic Signaling, the Gut–Prostate Axis, and Translational Perspectives
by Eduardo Pérez-Campos Mayoral, Laura Pérez-Campos Mayoral, María Teresa Hernández-Huerta, Hector Alejandro Cabrera-Fuentes, Efrén Emmanuel Jarquín-González, Héctor Martínez-Ruiz, Margarito Martínez-Cruz, Carlos Romero-Diaz, Miriam Emily Avendaño-Villegas, Gabriel Mayoral-Andrade, Carlos Mauricio Lastre-Domínguez, Edgar Zenteno, María del Socorro Pina-Canseco, Primitivo Ismael Olivera González, Lucia Martínez-Martínez, Bernardo Rodrigo Santiago-Luna, Javier Vázquez-Pérez, Andrea Paola Cruz-Pérez, Diana Palmero-Alcántara, Tania Sinaí Santiago-Ramírez, Erico Briones-Guerash, Abelardo Augusto Ramírez-Davila, Juan de Dios Ruiz-Rosado and Eduardo Pérez-Camposadd Show full author list remove Hide full author list
Cancers 2026, 18(8), 1219; https://doi.org/10.3390/cancers18081219 - 12 Apr 2026
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Abstract
Background: Prostate cancer (PCa) arises from complex interactions among host genetics, androgen signaling, and microbial communities. Emerging genomic evidence supports the presence of microbial consortia within prostate tissue, suggesting that microbial genes, metabolites, and host–microbe interactions may contribute to chronic inflammation, oncogenic signaling, [...] Read more.
Background: Prostate cancer (PCa) arises from complex interactions among host genetics, androgen signaling, and microbial communities. Emerging genomic evidence supports the presence of microbial consortia within prostate tissue, suggesting that microbial genes, metabolites, and host–microbe interactions may contribute to chronic inflammation, oncogenic signaling, and therapeutic resistance. Methods: We conducted a narrative review using targeted searches of PubMed and Google Scholar for studies published between 2020 and 2025, complemented by selected mechanistic reports published in March 2026. Human studies and experimental research providing mechanistic insights into prostate models were prioritized. Due to the heterogeneous methodologies, evidence was synthesized qualitatively, with an emphasis on genomic and signaling perspectives. Results: Low-biomass microbial DNA is consistently detected in prostate tissue. Proteomic analyses of Corpora amylacea suggest a “fossil record” of past infections through sequestered microbial DNA and antimicrobial proteins, potentially priming tissue for long-term carcinogenic processes, although contamination remains a key limitation. Recurrent bacterial and viral signals, including Cutibacterium acnes, Escherichia coli, Pseudomonas, Acinetobacter, human papillomavirus, Epstein–Barr virus, and cytomegalovirus, appear to converge on a restricted set of tumor-relevant pathways, including TLR–NF-κB, MAPK, PI3K/AKT/mTOR, cGAS–STING, and p53/pRb disruption. These interactions may promote cytokine production, oxidative stress, DNA damage, epithelial–mesenchymal transition, extracellular matrix remodeling, immune evasion, and resistance to therapy. The gut–prostate axis further links intestinal dysbiosis and microbial metabolites with systemic IGF-1 signaling and castration resistance. Conclusions: Microbial genomic consortia in the prostate and gut may shape inflammatory, metabolic, and immune networks that influence PCa initiation and progression. However, most available data remain correlative and are limited by low-biomass sampling, contamination risk, and heterogeneous study designs. Future research should prioritize rigorous contamination control, longitudinal and prostate-specific mechanistic studies, and integrated multi-omic approaches to clarify causality and identify actionable microbial targets for prevention, diagnosis, and therapy. Full article
(This article belongs to the Section Molecular Cancer Biology)
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