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18 pages, 3067 KiB  
Article
LncRNA-Mediated Tissue-Specific Plastic Responses to Salinity Changes in Oysters
by Mengshi Zhang, Jinlong Zhao, Ao Li, Mingjie Zhao, Meitong Huo, Jinhe Deng, Luping Wang, Wei Wang, Guofan Zhang and Li Li
Int. J. Mol. Sci. 2025, 26(10), 4523; https://doi.org/10.3390/ijms26104523 - 9 May 2025
Viewed by 159
Abstract
Salinity is a key environmental factor influencing the survival of aquatic organisms, and transcriptional plasticity is a crucial emergency response to environmental changes. However, most transcriptomic studies on salinity responses have not explored the expression patterns and regulatory mechanisms across different tissues. The [...] Read more.
Salinity is a key environmental factor influencing the survival of aquatic organisms, and transcriptional plasticity is a crucial emergency response to environmental changes. However, most transcriptomic studies on salinity responses have not explored the expression patterns and regulatory mechanisms across different tissues. The Suminoe oyster (Crassostrea ariakensis), a sessile estuarine species that inhabits fluctuating salinity environments, provides an excellent model for studying the molecular basis of salinity response divergence. All eight tissues responded to acute salinity stresses and exhibited distinct tissue-specific expression patterns in both mRNA and long non-coding RNA (lncRNA) profiles across three salinity conditions. The hepatopancreas and striated muscle were identified as tissues specifically sensitive to hyper- and hypo-saline stress, respectively, based on the number, expression pattern, and plasticity of differentially expressed genes (DEGs). We established lncRNA-mRNA regulatory relationships that environmentally responsive lncRNAs enhanced DEGs’ expression and underpinning tissue-specific responses. Under moderate stress, the hepatopancreas and striated muscle initiated positive responses related to water transport and shell closure, respectively. Under severe stress, the hepatopancreas activated cellular resistance pathways, while the striated muscle experienced significant cell death. Our findings provide insights into lncRNA-mediated, tissue-specific environmental responses and lay the foundation for further research into the adaptive evolution of tissue-specific regulation. Full article
(This article belongs to the Section Molecular Biology)
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20 pages, 3372 KiB  
Article
Salinity as an Abiotic Stressor for Eliciting Bioactive Compounds in Marine Microalgae
by Adrián Macías-de la Rosa, Lorenzo López-Rosales, Antonio Contreras-Gómez, Asterio Sánchez-Mirón, Francisco García-Camacho and María del Carmen Cerón-García
Toxins 2024, 16(10), 425; https://doi.org/10.3390/toxins16100425 - 1 Oct 2024
Cited by 3 | Viewed by 1801
Abstract
This study investigated the impact of culture medium salinity (5–50 PSU) on the growth and maximum photochemical yield of photosystem II (Fv/Fm) and the composition of carotenoids, fatty acids, and bioactive substances in three marine microalgae (Chrysochromulina rotalis [...] Read more.
This study investigated the impact of culture medium salinity (5–50 PSU) on the growth and maximum photochemical yield of photosystem II (Fv/Fm) and the composition of carotenoids, fatty acids, and bioactive substances in three marine microalgae (Chrysochromulina rotalis, Amphidinium carterae, and Heterosigma akashiwo). The microalgae were photoautotrophically cultured in discontinuous mode in a single stage (S1) and a two-stage culture with salt shock (S2). A growth model was developed to link biomass productivity with salinity for each species. C. rotalis achieved a maximum biomass productivity (Pmax) of 15.85 ± 0.32 mg·L−1·day−1 in S1 and 16.12 ± 0.13 mg·L−1·day−1 in S2. The salt shock in S2 notably enhanced carotenoid production, particularly in C. rotalis and H. akashiwo, where fucoxanthin was the main carotenoid, while peridinin dominated in A. carterae. H. akashiwo also exhibited increased fatty acid productivity in S2. Salinity changes affected the proportions of saturated, monounsaturated, and polyunsaturated fatty acids in all three species. Additionally, hyposaline conditions boosted the production of haemolytic substances in A. carterae and C. rotalis. Full article
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22 pages, 10418 KiB  
Article
Update of the Interpretive Conceptual Model of Ladeira de Envendos Hyposaline Hydromineral System (Central Portugal): A Contribution to Its Sustainable Use
by José M. Marques, Paula M. Carreira, Pedro Caçador and Manuel Antunes da Silva
Sustainability 2024, 16(12), 5179; https://doi.org/10.3390/su16125179 - 18 Jun 2024
Viewed by 1204
Abstract
The aim of this paper is to describe the surveys performed in order to update the interpretive conceptual circulation model of the Ladeira de Envendos hyposaline hydromineral system (Central Portugal). The geology of the Ladeira de Envendos region is strongly controlled by the [...] Read more.
The aim of this paper is to describe the surveys performed in order to update the interpretive conceptual circulation model of the Ladeira de Envendos hyposaline hydromineral system (Central Portugal). The geology of the Ladeira de Envendos region is strongly controlled by the Amêndoa-Carvoeiro synform, of Ordovician-Silurian age, presenting continuous and aligned quartzite ridges on the NE flank, that form the basic structure of a set of inselbergs. The physico-chemical analysis of the Ladeira de Envendos natural mineral spring and borehole waters was provided by the Super Bock Group Enterprise (Concessionaire of the Ladeira de Envendos). Furthermore, two sampling campaigns took place to increase knowledge on the isotopic composition of the studied natural mineral waters. The stable (δ2H, δ18O) isotopic data indicate that local meteoric waters infiltrate around 400 m altitude and evolve to the natural mineral waters (of Cl-Na facies) through a NW–SE underground flow path ascribed to the highly fractured and permeable quartzite rocks. From recharge to discharge, the infiltrated meteoric waters acquire silica (±9 mg/L) due to water–quartzite rock interaction. These natural mineral waters emerge at temperatures around 21 °C, being the up flow of these waters controlled by the rock fractures and local faults. The natural mineral waters mean residence time range between 25 and 40 years, as indicated by the 3H content of these waters, enhancing an active recharge of this hydromineral system. The results obtained indicate existence of three hydrogeological subsystems, ascribed to three inselbergs, with similar groundwater circulation paths. These multi and interdisciplinary studies should be seen as an important contribution to the sustainable management of this type of natural mineral water resources. Full article
(This article belongs to the Special Issue Sustainable Development of Hydrogeology)
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13 pages, 2585 KiB  
Article
High Light Intensity and CO2 Enrichment Synergistically Mitigated the Stress Caused by Low Salinity in Pyropia yezoensis
by Hailong Wu, Chuchu Wang, He Li, Jiang Chen, Jiankai Zhang, Zixue Luo, Fangsheng Cheng and Juntian Xu
J. Mar. Sci. Eng. 2023, 11(11), 2193; https://doi.org/10.3390/jmse11112193 - 17 Nov 2023
Cited by 3 | Viewed by 1552
Abstract
Macroalgae, playing a crucial role in coastal marine ecosystems, are subject to multiple environmental challenges due to tidal and seasonal alterations. In this work, we investigated the physiological responses of Pyropia yezoensis to ocean acidification (ambient CO2 (AC: 400 μatm) and elevated [...] Read more.
Macroalgae, playing a crucial role in coastal marine ecosystems, are subject to multiple environmental challenges due to tidal and seasonal alterations. In this work, we investigated the physiological responses of Pyropia yezoensis to ocean acidification (ambient CO2 (AC: 400 μatm) and elevated CO2 (HC: 1000 μatm)) under changing salinity (20, 30 psu) and light intensities (50, 100 μmol photons m−2 s−1) by measuring the growth, pigment content, chlorophyll fluorescence, and soluble sugar content. The key results are the following: (1) P. yezoensis exhibited better growth under normal salinity (30 psu) compared to hyposaline conditions (20 psu). (2) Intermediate light intensity increased phycoerythrin content, ultimately enhancing thalli growth without significant changes to the contents of chlorophyll a and carotenoids. (3) Ocean acidification alleviated hyposaline stress by enhancing pigment production in P. yezoensis only at a salinity of 20 psu, highlighting the complex interplay of these environmental factors. These findings indicate that higher light intensities and elevated pCO2 levels could mitigate the stress caused by low salinity. Full article
(This article belongs to the Section Marine Ecology)
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16 pages, 4481 KiB  
Article
Mechanisms of Digestive Enzyme Response to Acute Salinity Stress in Juvenile Yellowfin Tuna (Thunnus albacares)
by Ninglu Zhang, Rui Yang, Zhengyi Fu, Gang Yu and Zhenhua Ma
Animals 2023, 13(22), 3454; https://doi.org/10.3390/ani13223454 - 9 Nov 2023
Cited by 13 | Viewed by 2112
Abstract
This study investigates the effect of a sudden change in salinity for 48 h on the digestive enzyme activity of juvenile yellowfin tuna. The treatment included a control salinity of 32‰ in natural seawater and an experimental salinity of 29‰. Acute stress experiments [...] Read more.
This study investigates the effect of a sudden change in salinity for 48 h on the digestive enzyme activity of juvenile yellowfin tuna. The treatment included a control salinity of 32‰ in natural seawater and an experimental salinity of 29‰. Acute stress experiments were carried out on 72 juvenile yellowfin tuna (646.52 ± 66.32 g) for 48 h to determine changes in digestive enzyme activity in different intestinal sections over time (0 h, 12 h, 24 h, 48 h). The activities of pepsin, trypsin, α-amylase, lipase, and chymotrypsin in the digestive organs (stomach, foregut, and pyloric ceca) of juvenile yellowfin tuna were measured. Pepsin and pancreatic protease in the experimental group were significantly lower than in the control group (p < 0.05). α-amylase showed a fluctuating trend of decreasing and then increasing, and its activity trend was pyloric ceca > foregut > stomach. The lipase activity of gastric tissues decreased at the beginning and then increased, reaching a minimum at 24 h (2.74 ± 1.99 U·g protein−1). The change of lipase in the pyloric ceca and foregut was increasing and then decreasing. The lipase activity trend was pyloric ceca > foregut > stomach. The chymotrypsin showed a decreasing and increasing trend and then stabilized at 48 h with a pattern of pyloric ceca > foregut > stomach. Similarly, the gut villi morphology was not significantly altered in the acutely salinity-stressed compared to the non-salinity-stressed. This study suggests that salinity may change the digestive function of juvenile yellowfin tuna, thereby affecting fish feeding, growth, and development. On the contrary, yellowfin tuna is highly adapted to 29‰ salinity. However, excessive stress may negatively affect digestive enzyme activity and reduce fish digestibility. This study may provide a scientific basis for a coastal aquaculture water environment for yellowfin tuna farming, which may guide the development and cultivation of aquaculture. Full article
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13 pages, 592 KiB  
Article
Effects of Ammonia and Salinity Stress on Non-Volatile and Volatile Compounds of Ivory Shell (Babylonia areolata)
by Chunsheng Liu, Yunchao Sun, Xin Hong, Feng Yu, Yi Yang, Aimin Wang and Zhifeng Gu
Foods 2023, 12(17), 3200; https://doi.org/10.3390/foods12173200 - 25 Aug 2023
Cited by 8 | Viewed by 1666
Abstract
In this study, the flavor compounds of ivory shell (Babylonia areolata) and their changes caused by ammonia and salinity stresses were studied. Ammonia stress improved the contents of free amino acids (FAAs), 5′-adenosine monophosphate (AMP), citric acid, and some mineral ions [...] Read more.
In this study, the flavor compounds of ivory shell (Babylonia areolata) and their changes caused by ammonia and salinity stresses were studied. Ammonia stress improved the contents of free amino acids (FAAs), 5′-adenosine monophosphate (AMP), citric acid, and some mineral ions such as Na+, PO43−, and Cl. The FAA contents decreased with increasing salinity, while the opposite results were observed in most inorganic ions (e.g., K+, Na+, Mg2+, Mn2+, PO43−, and Cl). Hyposaline and hypersaline stresses increased the AMP and citric acid contents compared to the control group. The equivalent umami concentration (EUC) values were 3.53–5.14 g monosodium glutamate (MSG)/100 g of wet weight, and the differences in EUC values among treatments were mainly caused by AMP. Hexanal, butanoic acid, and 4-(dimethylamino)-3-hydroxy- and (E, E)-3,5-octadien-2-one were the top three volatile compounds, and their profiles were significantly affected when ivory shells were cultured under different ammonia and salinity conditions. Full article
(This article belongs to the Section Foods of Marine Origin)
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18 pages, 6727 KiB  
Article
Interaction Network Construction and Functional Analysis of the Plasma Membrane H+-ATPase in Bangia fuscopurpurea (Rhodophyta)
by Haiqin Yao, Wenjun Wang, Yuan Cao, Zhourui Liang and Pengyan Zhang
Int. J. Mol. Sci. 2023, 24(8), 7644; https://doi.org/10.3390/ijms24087644 - 21 Apr 2023
Cited by 4 | Viewed by 1975
Abstract
Salinity is a serious threat to most land plants. Although seaweeds adapt to salty environments, intertidal species experience wide fluctuations in external salinities, including hyper- and hypo-saline stress. Bangia fuscopurpurea is an economic intertidal seaweed with a strong tolerance to hypo-salinity. Until now, [...] Read more.
Salinity is a serious threat to most land plants. Although seaweeds adapt to salty environments, intertidal species experience wide fluctuations in external salinities, including hyper- and hypo-saline stress. Bangia fuscopurpurea is an economic intertidal seaweed with a strong tolerance to hypo-salinity. Until now, the salt stress tolerance mechanism has remained elusive. Our previous study showed that the expression of B. fuscopurpurea plasma membrane H+-ATPase (BfPMHA) genes were the most upregulated under hypo-salinity. In this study, we obtained the complete sequence of BfPMHA, traced the relative expression of this BfPMHA gene in B. fuscopurpurea under hypo-salinity, and analyzed the protein structure and properties based on the gene’s sequence. The result showed that the expression of BfPMHA in B. fuscopurpurea increased significantly with varying hypo-salinity treatments, and the higher the degree of low salinity stress, the higher the expression level. This BfPMHA had typical PMHA structures with a Cation-N domain, an E1-E2 ATPase domain, a Hydrolase domain, and seven transmembrane domains. In addition, through the membrane system yeast two-hybrid library, three candidate proteins interacting with BfPMHA during hypo-saline stress were screened, fructose–bisphosphate aldolase (BfFBA), glyceraldehyde 3-phosphate dehydrogenase (NADP+) (phosphorylating) (BfGAPDH), and manganese superoxide dismutase (BfMnSOD). The three candidates and BfPMHA genes were successfully transferred and overexpressed in a BY4741 yeast strain. All of them significantly enhanced the yeast tolerance to NaCl stress, verifying the function of BfPMHA in salt stress response. This is the first study to report the structure and topological features of PMHA in B. fuscopurpurea and its candidate interaction proteins in response to salt stress. Full article
(This article belongs to the Section Molecular Biology)
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23 pages, 39243 KiB  
Article
A Study of the Metabolic Profiles of Penicillium dimorphosporum KMM 4689 Which Led to Its Re-Identification as Penicillium hispanicum
by Liliana E. Nesterenko, Roman S. Popov, Olesya I. Zhuravleva, Natalya N. Kirichuk, Viktoria E. Chausova, Kirill S. Krasnov, Mikhail V. Pivkin, Ekaterina A. Yurchenko, Marina P. Isaeva and Anton N. Yurchenko
Fermentation 2023, 9(4), 337; https://doi.org/10.3390/fermentation9040337 - 28 Mar 2023
Cited by 7 | Viewed by 2334
Abstract
Changes in cultivation conditions, in particular salinity and temperature, affect the production of secondary fungal metabolites. In this work, the extracts of fungus previously described as Penicillium dimorphosporum cultivated in various salinity and temperature conditions were investigated using HPLC UV/MS techniques, and their [...] Read more.
Changes in cultivation conditions, in particular salinity and temperature, affect the production of secondary fungal metabolites. In this work, the extracts of fungus previously described as Penicillium dimorphosporum cultivated in various salinity and temperature conditions were investigated using HPLC UV/MS techniques, and their DPPH radical scavenging and cytotoxicity activities against human prostate cancer PC-3 cells and rat cardiomyocytes H9c2 were tested. In total, 25 compounds, including 13 desoxyisoaustamide-related alkaloids and eight anthraquinones, were identified in the studied extracts and their relative amounts were estimated. The production of known neuroprotective alkaloids 5, 6 and other brevianamide alkaloids was increased in hypersaline and high-temperature conditions, and this may be an adaptation to extreme conditions. On the other hand, hyposalinity stress may induce the synthesis of unidentified antioxidants with low cytotoxicity that could be very interesting for future investigation. The study of secondary metabolites of the strain KMM 4689 showed that although brevianamide-related alkaloids and anthraquinone pigments are widely distributed in various fungi, these metabolites have not been described for P. dimorphosporum and related species. For this reason, the strain KMM 4689 was re-sequenced using the β-tubulin gene and ITS regions as molecular markers and further identified as P. hispanicum. Full article
(This article belongs to the Special Issue New Research on Fungal Secondary Metabolites)
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13 pages, 1727 KiB  
Article
Decreased Salinity Offsets the Stimulation of Elevated pCO2 on Photosynthesis and Synergistically Inhibits the Growth of Juvenile Sporophyte of Saccharina japonica (Laminariaceae, Phaeophyta)
by Wenze Zhang, Yunyun Shi, Lianghua He, Xinhua Chen, Fengxiao Hu, Yinrong Chen, Yun Pang, Sufang Li and Yaoyao Chu
Plants 2022, 11(21), 2978; https://doi.org/10.3390/plants11212978 - 4 Nov 2022
Cited by 4 | Viewed by 2461
Abstract
The combined effect of elevated pCO2 (Partial Pressure of Carbon Dioxide) and decreased salinity, which is mainly caused by freshwater input, on the growth and physiological traits of algae has been poorly assessed. In order to investigate their individual and interactive effects [...] Read more.
The combined effect of elevated pCO2 (Partial Pressure of Carbon Dioxide) and decreased salinity, which is mainly caused by freshwater input, on the growth and physiological traits of algae has been poorly assessed. In order to investigate their individual and interactive effects on the development of commercially farmed algae, the juvenile sporophytes of Saccharina japonica were cultivated under different levels of salinity (30, 25 and 20 psu) and pCO2 (400 and 1000 µatm). Individually, decreased salinity significantly reduced the growth rate and pigments of S. japonica, indicating that the alga was low-salinity stressed. The maximum quantum yield, Fv/Fm, declined at low salinities independent of pCO2, suggesting that the hyposalinity showed the main effect. Unexpectedly, the higher pCO2 enhanced the maximum relative electron transport rate (rETRmax) but decreased the growth rate, pigments and soluble carbohydrates contents. This implies a decoupling between the photosynthesis and growth of this alga, which may be linked to an energetic reallocation among the different metabolic processes. Interactively and previously untested, the decreased salinity offset the improvement of rETRmax and aggravated the declines of growth rate and pigment content caused by the elevated pCO2. These behaviors could be associated with the additionally decreased pH that was induced by the low salinity. Our data, therefore, unveils that the decreased salinity may increase the risks of future CO2-induced ocean acidification on the production of S. japonica. Full article
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13 pages, 858 KiB  
Article
High Ecophysiological Plasticity of Desmarestia aculeata (Phaeophyceae) Present in an Arctic Fjord under Varying Salinity and Irradiance Conditions
by Johanna Marambio, Nora Diehl and Kai Bischof
Biology 2022, 11(10), 1499; https://doi.org/10.3390/biology11101499 - 13 Oct 2022
Cited by 1 | Viewed by 1976
Abstract
The seaweed Desmarestia aculeata (Phaeophyceae) is distributed in the temperate zone of the North Atlantic up to the Arctic, where it is exposed to a high Arctic light regime and fluctuating salinity conditions resulting from glacial and terrestrial run-off. Information on how this [...] Read more.
The seaweed Desmarestia aculeata (Phaeophyceae) is distributed in the temperate zone of the North Atlantic up to the Arctic, where it is exposed to a high Arctic light regime and fluctuating salinity conditions resulting from glacial and terrestrial run-off. Information on how this species is able to thrive under current and future Arctic conditions is scarce. During the Arctic summer of 2019, D. aculeata was collected in Kongsfjorden, Svalbard (78.9° N, 11.9° E) to investigate its physiological and biochemical responses to variations in salinity (salinities: 34, 28 and 18) and daily cycles of irradiance (50–500 μmol photons m−2s−1) at 0 °C over 21 days. The species revealed effective short-term acclimation to both abiotic drivers. Maximal quantum yield of PSII (Fv/Fm) fluctuated with the light cycle at a salinity of 34, while the maximum relative electron transport rate (rETRmax) significantly differed between salinities of 28 and 18. Chlorophyll a and β-Carotene remained at high concentrations in all treatments showing pronounced acclimation during the experiment. High mannitol concentrations were measured throughout the experiment, while phlorotannins were high at low salinity. Hyposalinity and light are interacting drivers of the physiological and biochemical acclimation process for D. aculeata. Our experiment highlights the high ecophysiological plasticity of D. aculeata, suggesting that the species will likely be capable of withstanding future habitat changes in the Arctic. Full article
(This article belongs to the Special Issue Polar Ecosystem: Response of Organisms to Changing Climate)
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12 pages, 2297 KiB  
Article
Evaluation of Physiological State of Pen Shell Pinna nobilis (Linnaeus, 1758) by a Non-Invasive Heart Rate Recording under Short-Term Hyposalinity Test
by Rajko Martinović, Danijela Joksimović, José Rafael García-March, Nardo Vicente and Zoran Gačić
Micromachines 2022, 13(9), 1549; https://doi.org/10.3390/mi13091549 - 18 Sep 2022
Cited by 2 | Viewed by 2324
Abstract
A non-invasive laser fiber-optic method based on infrared sensors for heart rate (Hr) recording was applied to assess the physiological condition of Pinna nobilis. During 2017, the specimens of P. nobilis were sampled at three sites within the Boka Kotorska Bay, Montenegro [...] Read more.
A non-invasive laser fiber-optic method based on infrared sensors for heart rate (Hr) recording was applied to assess the physiological condition of Pinna nobilis. During 2017, the specimens of P. nobilis were sampled at three sites within the Boka Kotorska Bay, Montenegro and used for ex situ experiments with short-term reduction/restoration of ambient salinity to evaluate their physiological adaptive capacity based on heart rate recovery time (Trec). Mean Trec for specimens from Sv. Nedjelja (reference site), Dobrota and Sv. Stasije were 72 ± 3, 91 ± 7 and 117 ± 15 min, while the coefficients of variation (CV) were 0.12, 0.13 and 0.17, respectively. Resting heart rate (Hrrest) and Trec showed statistically significant differences between the groups of mussels from Dobrota and Sv. Stasije in comparison to the reference site. Statistically significant correlations were observed between Trec and shell length/width, which was not the case in comparison between Hrrest and shell length/width. The lower adaptive capacity within the P. nobilis specimens from Dobrota and Sv. Stasije in comparison to the reference site could occur due to stress induced by deterioration of environmental conditions, which could have led to impairment of the physiological state of the mussels evaluated by Hr. All the specimens of P. nobilis survived the experimental treatments; afterwards, they were successfully transplanted at the Dobrota site. The experimental unit with sensor technology applied in this study can provide Hr recording in real time and could have an application in monitoring the physiological/health state of P. nobilis individuals maintained in aquaria. Full article
(This article belongs to the Special Issue Biosensors for Biomedical and Environmental Applications)
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13 pages, 9307 KiB  
Article
Quaternary Evolutionary Stages of Selinitsa Cave (SW Peloponnese, Greece) Reveal Sea-Level Changes Based on 3D Scanning, Geomorphological, Biological, and Sedimentological Indicators
by Isidoros Kampolis, Stavros Triantafyllidis, Vasilios Skliros and Evangelos Kamperis
Quaternary 2022, 5(2), 24; https://doi.org/10.3390/quat5020024 - 16 Apr 2022
Cited by 4 | Viewed by 3999
Abstract
Significant evolutionary stages of Selinitsa Cave (SW Peloponnese, Greece) were revealed by 3D mapping, as well as geomorphological study of the cave and the nearby landscape. Four marine terraces were identified in the area of the coastal cave at 6, 10.7, 16.6, and [...] Read more.
Significant evolutionary stages of Selinitsa Cave (SW Peloponnese, Greece) were revealed by 3D mapping, as well as geomorphological study of the cave and the nearby landscape. Four marine terraces were identified in the area of the coastal cave at 6, 10.7, 16.6, and 30–32 m above sea level (asl), with the terrace at 16.6 m representing Marine Isotope Stage (MIS) 5. The widest karstified space of Selinitsa Cave clusters between 15.73 and 18.05 m above sea level (asl), with the peak lying at 16.4 m asl, corresponding to the level where the phreatic/epiphreatic zone was stable for a sufficient period of time. A tidal notch at 16.4 m asl at the cave entrance is correlated to the marine terrace at 16.6 m. Both features correspond to the sea-level stand at which intense karstification occurred. The tidal notch bears a horizontal arrangement of Lithophaga borings at the vertex. Sedimentological investigation of the Selinitsa fine-grained deposit revealed the paleohydrologic regime of the cave. It is characterized by “slack-water” facies, indicating very low water flow speeds, whereas the thickness of the deposit points to stable hydrological conditions for prolonged periods. The cave sediment height of 18.8 m asl indicates a flooding level higher than sea level. The overlying Plattenkalk flysch is most probably the major source of detritus, and the predominance of authigenic dolomite (>98% modal in the carbonate fraction) indicates a hyposaline environment related to mixing of sea water with percolating fresh water. The approach of this study shows the significance of 3D mapping, bio-geo-Relative Sea Level (RSL) indicators, and sedimentology in deciphering the paleogeographic evolution of coastal karstic systems and subsequently defining the paleoclimate regime of coastal areas in Greece and the eastern Mediterranean during the Late Quaternary. Full article
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24 pages, 1927 KiB  
Article
Transcriptomic and Proteomic Analysis of Marine Nematode Litoditis marina Acclimated to Different Salinities
by Yusu Xie and Liusuo Zhang
Genes 2022, 13(4), 651; https://doi.org/10.3390/genes13040651 - 7 Apr 2022
Cited by 9 | Viewed by 2918
Abstract
Salinity is a critical abiotic factor for all living organisms. The ability to adapt to different salinity environments determines an organism’s survival and ecological niches. Litoditis marina is a euryhaline marine nematode widely distributed in coastal ecosystems all over the world, although numerous [...] Read more.
Salinity is a critical abiotic factor for all living organisms. The ability to adapt to different salinity environments determines an organism’s survival and ecological niches. Litoditis marina is a euryhaline marine nematode widely distributed in coastal ecosystems all over the world, although numerous genes involved in its salinity response have been reported, the adaptive mechanisms underlying its euryhalinity remain unexplored. Here, we utilized worms which have been acclimated to either low-salinity or high-salinity conditions and evaluated their basal gene expression at both transcriptomic and proteomic levels. We found that several conserved regulators, including osmolytes biosynthesis genes, transthyretin-like family genes, V-type H+-transporting ATPase and potassium channel genes, were involved in both short-term salinity stress response and long-term acclimation processes. In addition, we identified genes related to cell volume regulation, such as actin regulatory genes, Rho family small GTPases and diverse ion transporters, which might contribute to hyposaline acclimation, while the glycerol biosynthesis genes gpdh-1 and gpdh-2 accompanied hypersaline acclimation in L. marina. This study paves the way for further in-depth exploration of the adaptive mechanisms underlying euryhalinity and may also contribute to the study of healthy ecosystems in the context of global climate change. Full article
(This article belongs to the Section Animal Genetics and Genomics)
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14 pages, 2958 KiB  
Article
Transcriptome Profiling Reveals a Divergent Adaptive Response to Hyper- and Hypo-Salinity in the Yellow Drum, Nibea albiflora
by Xiang Zhao, Zhicheng Sun, Tianxiang Gao and Na Song
Animals 2021, 11(8), 2201; https://doi.org/10.3390/ani11082201 - 25 Jul 2021
Cited by 11 | Viewed by 4197
Abstract
The yellow drum (Nibea albiflora) is an important marine economic fish that is widely distributed in the coastal waters of the Northwest Pacific. In order to understand the molecular regulatory mechanism of the yellow drum under salinity stress, in the present [...] Read more.
The yellow drum (Nibea albiflora) is an important marine economic fish that is widely distributed in the coastal waters of the Northwest Pacific. In order to understand the molecular regulatory mechanism of the yellow drum under salinity stress, in the present study, transcriptome analysis was performed under gradients with six salinities (10, 15, 20, 25, 30, and 35 psu). Compared to 25 psu, 907, 1109, 1309, 18, and 243 differentially expressed genes (DEGs) were obtained under 10, 15, 20, 30, and 35 psu salinities, respectively. The differential gene expression was further validated by quantitative real-time PCR (qPCR). The results of the tendency analysis showed that all DEGs of the yellow drum under salinity fluctuation were mainly divided into three expression trends. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis showed that the PI3K-Akt signaling pathway, Jak-STAT signaling pathway as well as the glutathione metabolism and steroid biosynthesis pathways may be the key pathways for the salinity adaptive regulation mechanism of the yellow drum. G protein-coupled receptors (GPCRs), the solute carrier family (SLC), the transient receptor potential cation channel subfamily V member 6 (TRPV6), isocitrate dehydrogenase (IDH1), and fructose-bisphosphate aldolase C-B (ALDOCB) may be the key genes in the response of the yellow drum to salinity stress. This study explored the transcriptional patterns of the yellow drum under salinity stress and provided fundamental information for the study of salinity adaptability in this species. Full article
(This article belongs to the Special Issue Animals' Transcriptome Response to Environment Change)
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13 pages, 576 KiB  
Article
Zooplankton Community Structure in Shallow Saline Steppe Inland Waters
by Katalin Zsuga, Zarina Inelova and Emil Boros
Water 2021, 13(9), 1164; https://doi.org/10.3390/w13091164 - 23 Apr 2021
Cited by 10 | Viewed by 3163
Abstract
Several shallow saline waters can be found in Central Asia in arid steppe climate, but our knowledge of their zooplankton community has been so far rather limited. The aim of our research was to provide data on the steppe zooplankton community in a [...] Read more.
Several shallow saline waters can be found in Central Asia in arid steppe climate, but our knowledge of their zooplankton community has been so far rather limited. The aim of our research was to provide data on the steppe zooplankton community in a large-scale regional study. Therefore, a baseline survey was carried out in 23 shallow inland waters of different salinity in Northern Kazakhstan. We measured the quantity and identified the taxonomic composition of zooplankton in the spring period and examined changes in community structure in correlation with salinity. Lesser salt concentration of the hyposaline–mesosaline waters was indicated by the presence of halophilic rotifer species: Brachionus asplanchnoides, Br. dimidiatus, Br. plicatilis. Mesosaline and hypersaline waters were indicated by the presence of halobiont crustaceans: Moina salina, Arctodiaptomus salinus, Cletocamptus retrogressus. Very high concentration of salt was indicated by presence of Artemia alone which is the only group, that can tolerate and adapt to this extreme environment. In the hypersaline waterbodies at over 79 gL−1 high TDS conditions a very simple tropical structure was found. Artemia playing monopolistic ecological function in the zooplankton community. We identified three characteristic groups of shallow inland saline waters based on their zooplankton composition. Full article
(This article belongs to the Special Issue Ecosystems of Inland Saline Waters)
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