Search Results (3,834)

Arthrobotrys flagrans, a typical nematode-trapping fungus (NTF) that produces a three-dimensional adhesive network to capture nematodes, has excellent potential for the development of biocontrol agents against both plant and animal parasitic nematodes. Proteins containing the common fungal extracellular membrane (CFEM) domain are important for the nematodes’ trapping by A. flagrans. The loss of AfCFEM1 and AfCFEM3 resulted in a significant upregulation of proteins associated with fungal pathogenicity, forming a denser adhesive material on the trap surface and ultimately increasing nematode mortality. However, the disruption of AfCFEM2 led to the opposite result. Furthermore, the deletion of AfCFEM1-3 not only affected trap morphology, resulting in an increased proportion of irregular traps (i.e., trap cells not fused to the hyphae), but also led to a thinner cell wall of the traps. In addition, the compensatory effects among the CFEM family and other families were demonstrated. This study revealed that the AfCFEM1-3 genes in A. flagrans participated in the formation of traps, adhesive material and cell wall, and pathogenicity, providing new insights into the functions of AfCFEM in the process of nematode trapping by NTF. Full article

Turfgrass systems in European urban green spaces, including sports fields, golf courses, and residential lawns, must balance high performance with compliance with stricter pesticide regulations. This review examines Synergistic Pest Management (SPM), an advanced form of Integrated Pest Management (IPM) that integrates monitoring, biological, cultural, and targeted chemical strategies for sustainable control of major turfgrass pests. Focus is placed on key insect pests such as Tipula spp. larvae and chafer beetle grubs (Scarabaeidae) and fungal pathogens, including Microdochium nivale, Clarireedia spp., Laetisaria fuciformis, Gaeumannomyces graminis var. avenae, and Colletotrichum spp., which cause significant losses in Central Europe and similar regions. Effective combinations include entomopathogenic nematodes with fungi, endophyte-infected cultivars with optimized mowing and irrigation, and low-dose insecticides paired with biological agents. The review considers how soil conditions, environmental timing, and maintenance practices influence success. Practical tools such as decision-support matrices and a seasonal calendar are provided for regional use. SPM can reduce chemical inputs, enhance biodiversity, and improve turf resilience, but adoption is limited by biological sensitivity, product availability, costs, and technical demands. SPM aligns with EU Directive 2009/128 and offers a pathway to sustainable turfgrass pest management. Future efforts should focus on regional validation, practitioner training, and precision technologies. Full article

Plant viruses have been traditionally considered pathogens restricted to plant hosts. However, recent studies have shown that some plant viruses can infect and replicate in filamentous fungi and oomycetes, suggesting that their host range is broader than previously thought, and that their ecological interactions are more complex. In this study, we investigated the ability of the well-characterized positive-sense RNA plant virus Tobacco mosaic virus (TMV) to replicate in four major phytopathogenic fungi from different taxonomic groups: Botrytis cinerea, Fusarium oxysporum f. sp. lycopersici, Verticillium dahliae, and Monilinia fructicola. Using a recombinant TMV-based vector expressing a green fluorescent protein (TMV-GFP-1056) as reporter, we demonstrated that TMV can enter, replicate, and persist within the mycelia of B. cinerea and V. dahliae—at least through the first subculture. However, it cannot replicate in F. oxysporum f. sp. lycopersici and M. fructicola. RNA interference (RNAi) is a conserved eukaryotic epigenetic mechanism that provides an efficient defence against viruses. We explored the role of RNAi in the interaction between TMV and the mycelia of V. dahliae and B. cinerea. Our results revealed a strong induction of the Dicer-like 1 and Argonaute 1 genes, which are key compounds of the RNA silencing pathway. This RNAi-based response impaired TMV-GFP replication in both fungi. Notably, despite viral replication and RNAi activation, the virulence of V. dahliae and B. cinerea on their respective host plants remained unaffected. These findings reinforce the emerging recognition of cross-kingdom virus transmission and interactions, which likely play a crucial role in pathogen ecology and viral evolution. Understanding these virus–fungus interactions not only sheds light on RNAi interference silencing mechanisms but also suggests that plant viruses like TMV could serve as simple and effective tools for functional genomic studies in fungi, such as in V. dahliae and B. cinerea. Full article

Macrophage extracellular traps (METs), which are extracellular immune structures released by macrophages, consist primarily of double-stranded DNA, histones, elastase, matrix metalloproteinase, myeloperoxidase, and other components. Recent studies have found that various pathogens (such as bacteria, fungi, and parasites) and environmental pollutants could induce the formation of METs through different mechanisms to help the host resist infection. However, accumulating evidence suggests that METs play a double-edged role in immune response, enhancing host defense while potentially contributing to tissue damage under certain pathological conditions. This review summarizes the mechanisms underlying the formation of METs, including different pathways triggered by various pathogens and environmental pollutants. We also discussed the role of METs in respiratory diseases, autoimmune diseases, metabolic diseases, tumors, and transplantation and injury, as well as recent advances in MET-targeted drugs, aiming to provide new insights for improving treatment strategies of relevant diseases. Full article

Due to the severe hazard of aflatoxins (AFs) to humans, it is of great significance to detect the key aflatoxins, aflatoxin B₁ (AFB₁) and aflatoxin G₁ (AFG₁), in food and feed in simple, rapid, and semi-quantitative ways. The hybridoma clone 3A1 was prepared in this study, and anti-AFB₁ monoclonal antibody (mAb) with high specificity and affinity (9.38 × 10⁸ L/mol) from 3A1 was purified. The indirect competitive enzyme-linked immunosorbent assay (ic-ELISA) demonstrated that the linear detection range for AFB₁ was 0.029–1.526 ng/mL with a limits of determination (LOD) of 0.023 ng/mL. A latex microsphere-based immunochromatographic test strip (LM-ICTS) was constructed based on 3A1, which showed that the strip could detect AFB₁ (LOD: lower than 1.79 ng/mL) and AFG₁ (LOD: lower than 8.08 ng/mL), and the linear detection ranges for AFB₁ and AFG₁ are 1.79–48.46 ng/mL and 8.08–107.40 ng/mL, respectively. The average recoveries of intra-assay and inter-assay for peanuts were (98.4 ± 4.7)% and (92.6 ± 7.6)%, and the average coefficient of variation (CVs) were 4.38% and 8.15%, respectively. For sunflower seeds, the intra-assay and inter-assay recoveries were (94.4 ± 7.2)% and (89.2 ± 4.3)%, and the average CVs were 6.6% and 4.9%, respectively. In summary, the developed LM-ICTS exhibited excellent sensitivity and specificity, which provided a rapidly stable on-site detection choice for AFB₁ and AFG₁ to contaminated agricultural samples, including grain and feed. Full article

Invasive candidiasis (IC) in Latin America is undergoing a significant epidemiological shift, increasingly driven by non-albicans strains such as Candida tropicalis, Candida parapsilosis, and Candidozyma auris. These pathogens often exhibit multidrug resistance, which complicates treatment and increases mortality. Diagnostic limitations, particularly in rural and public hospitals, delay detection and hinder the provision of rapid care. Environmental pressures, such as climate change and the widespread use of azoles in agriculture, appear to favor the selection of resistant and thermotolerant strains. Migratory birds may also play a role in the environmental transmission of pathogenic fungi. These factors are amplified by socioeconomic inequalities that restrict access to diagnostics and first-line antifungals. To help mitigate this emerging challenge, a One Health-oriented framework combining integrated environmental surveillance, robust antifungal-stewardship programmers, broader diagnostic access, and coordinated cross-sector public health actions should be developed. Reinforcing these pillars could lessen the regional burden of IC and slow the advance of antifungal resistance. Full article

A recent study challenges a fundamental principle of eukaryotic biology that each nucleus houses a complete genome. Two plant pathogenic fungi, Sclerotinia sclerotiorum and Botrytis cinerea, exhibit a segregated pattern of haploid chromosome distribution across two or more nuclei within each cell. The unequal distribution of the genome between nuclei suggests a coordinated system of internuclear recognition and regulation of cellular functions, a phenomenon previously associated with communication between nuclei of opposite mating type in both ascomycetes and basidiomycetes. Thus, the new study not only shatters expectations about genome biology but also opens new research avenues for understanding fungal adaptation and nuclear behavior. Full article

The lotus–fish co-culture (LFC) system leverages plant–fish symbiosis to optimize aqua-culture environments, enhancing both economic and ecological yields. However, the eco-logical mechanisms of microbial communities in LFC systems remain poorly understood, particularly regarding the functional roles of fungi, archaea, and viruses. This study compared microbiota (viruses, archaea, fungi) in water, sediment, and fish (crucian carp) gut of LFC and intensive pond culture (IPC) systems using integrated metagenomic and environmental analyses. Results demonstrated that LFC significantly reduced concentrations of total nitrogen, total phosphorus, and nitrite nitrogen and chemical oxygen demand in water, and organic matter and total nitrogen in sediment compared to IPC. Community diversity analysis, LefSe, and KEGG annotation revealed suppressed viral diversity in LFC, yet increased complexity and stability of intestinal virus communities compared to IPC. Archaeal and functional analyses revealed significantly enhanced ammonia oxidation and OM decomposition in LFC versus IPC, promoting methane metabolism equilibrium and sediment organic matter decomposition. Moreover, crucian carp intestines in LFC harbored abundant Methanobacteria, which contributed to maintaining a low hydrogen partial pressure, suppressing facultative anaerobes and reducing intestinal infection risk. The abundance of fungi in sediment and crucian carp intestine in LFC was significantly higher than that in IPC, showing higher ecological self-purification ability and sustainability potential in LFC. Collectively, LFC's optimized archaeal–fungal networks strengthened host immunity and environmental resilience, while viral community suppression reduced pathogen risks. These findings elucidate microbiome-driven mechanisms underlying LFC’s ecological advantages, providing a framework for designing sustainable aquaculture systems through microbial community modulation. Full article

Constructed wetlands are increasingly recognised for their potential in wastewater treatment, particularly in the removal of pathogenic microorganisms. However, the mechanisms of removal are not fully understood. This study investigated the role of endophytic and rhizosphere fungi and associated secondary metabolites in the removal of pathogenic bacteria from wastewater. Endophytic and rhizosphere fungi were isolated from roots of wetland macrophytes (T. latifolia, C. papyrus and P. mauritianus) and screened for their antimicrobial effects on E. coli, Shigella spp., Salmonella spp. and Vibrio spp. Secondary metabolites were extracted from fungal isolates (broth cultures) and tested for their antibacterial activity as a possible mechanism of pathogen removal. Antimicrobial activity of the fungi and their metabolites, measured as zones of inhibition, was analysed using ANOVA at a 5% significance level. Active secondary metabolites were identified using GC-MS techniques. Four fungal isolates (three endophytic, one rhizospheric) from the genus Candida exhibited antimicrobial activity against E. coli, Salmonella spp., Shigella spp. and Vibrio spp. in vitro. There were significant differences in inhibition zones (p < 0.0001) between the different species of fungi. Fungus RTGRS did not show any antibacterial activity on Vibrio spp. and Shigella spp. but showed the highest zones of inhibition of 21.17 ± 0.75 against Salmonella spp. This study demonstrated that the selected wetland macrophytes harbour both endophytic and rhizosphere fungi that can produce bioactive compounds that have antimicrobial properties, inhibiting the growth of pathogenic bacteria E. coli, Salmonella spp., Shigella spp. and Vibrio spp., contributing to pathogen removal in CWs. The findings have implications for the design and operation of CWs, as it is important to select macrophytes that harbour fungi with antimicrobial properties. More research is needed on the use of these fungi in wastewater treatment in full-scale CWs. Full article

Intercropping with green manures is an effective practice for increasing agricultural production and reducing environmental issues. However, the effects of green manure type and intercropping patten on soil nutrient availability and microbial communities remains underexplored. In the present study, the impacts of three green manure–maize intercropping patterns on maize yield, rhizosphere nutrient availability, and soil fungal community were evaluated. Four treatments (three replicate plots for each) were involved, including a monoculture treatment (MC) as a control and three intercropping patterns as follows: maize–ryegrass (Lolium perenne L.) (IntL), maize–forage soybean (Fen Dou mulv 2, a hybrid soybean cultivar) (IntF), and maize–ryegrass–forage soybean (IntLF) intercropping. The results showed that all three intercropping patterns significantly increased maize yield and rhizosphere available phosphorus (AP) compared with MC. Intercropping shifted the dominant assembly process of the maize rhizosphere fungal community from stochastic to deterministic processes, shaping a community rich in arbuscular mycorrhizal fungi (AMF) and limited in plant pathogens, primarily Exserohilum turcicum. AP showed significant correlations with fungal community and AMF, while maize yield was negatively correlated with plant pathogens. In addition, the dual-species green manure intercropping pattern (IntLF) had the strongest positive effects on maize yield, AP content, and fungal community compared with single-species patterns (IntL and IntF). These results illustrate the advantages of planting diversification in boosting crop production by improving nutrient availability and soil health in the rhizosphere and suggest that the maize–ryegrass–forage soybean intercropping system is a potential strategy for improving soil fertility and health. Full article

Mexican culture offers a great variety of traditional maize-based fermented foods that are beneficial for human health. Atole agrio (sour atole), prepared from blue maize (Zea mays) in the state of Veracruz, has been scarcely studied as a potential functional food. The purpose of this study was to select endogenous potentially probiotic lactic acid bacteria (LAB) from freshly fermented blue maize atole agrio. Samples of spontaneously fermented atole agrio were used for the isolation of LAB on MRS agar. The abilities to tolerate acidic pH, bile salts, and sodium chloride, as well as surface hydrophobicity and aggregation capabilities, were used as criteria for probiotic potential. Selected LAB were identified using MALDI-TOF-MS. Finally, safety-related characterizations, such as hemolytic activity and antibiotic susceptibility, were performed. In the initial stages of fermentation, the presence of fungi, yeasts, coliform organisms, and LAB were detected, and in the final fermentation process, where the blue atole agrio reached a pH of 4, 49 isolates of LAB were obtained. Sixteen isolates showed high tolerance to pH 2, and seven of them showed tolerance to 3% bile salts and 4% sodium chloride. The seven isolates were identified as Pediococcus pentosaceus. Although the seven isolates showed low hydrophobicity to hexadecane and chloroform, they had medium autoaggregation and coaggregation with pathogens. The seven isolates showed notable antibacterial properties against Staphylococcus aureus, Salmonella enterica serovar Typhimurium, Escherichia coli, and Listeria monocytogenes, as well as good amylolytic capacity. All the P. pentosaceus strains were non-hemolytic, sensible to clindamycin and resistant to the other 11 antibiotics tested. Only subtle differences were found among the seven isolates, which can be considered potential candidates for probiotics. The freshly fermented blue maize atole agrio can be considered a functional food containing potentially probiotic LAB and the antioxidant phenolic compounds present in blue maize. Full article

The application of biochar and beneficial microorganisms has gained attention as a sustainable strategy to enhance soil health and plant resistance to pathogens. Trichoderma spp. play critical roles in nutrient mobilization, rhizosphere colonization, and suppression of soilborne diseases. However, little is known about the interactive effects of biochar and Trichoderma on the suppression of Fusarium equiseti (P1I3)-induced root rot in grapevine seedlings. In this study, we investigated the effects of two Trichoderma aureoviride strains (URM 6668 and URM 3734), with and without grapevine pruning-derived biochar (BVP), on disease severity, plant growth, and soil properties. Our results revealed that the combination of biochar and Trichoderma significantly reduced disease incidence and promoted biomass accumulation. Notably, BVP and T. aureoviride URM 3734 were the most effective at reducing leaf disease severity, resulting in a 53% decrease. Conversely, the combination of BVP and T. aureoviride URM 6668 led to the greatest reduction in root disease severity, with a 56% decrease. These findings suggest a synergistic relationship between biochar and beneficial fungi, reinforcing the role of organic soil amendments in promoting plant health. The integrated use of biochar and Trichoderma strains offers a viable, environmentally sound approach for managing grapevine root rot and enhancing seedling health in sustainable viticulture systems. Full article

Candida albicans, listed by WHO as a priority fungal (yeast) pathogen, can cause invasive infections resistant to drugs, thus demanding novel strategies of disinfection. This study examines the inactivation, reactivation in darkness, and susceptibility to fluconazole of an antifungal-resistant C. albicans strain through UVC photolysis, chemical oxidation, and photooxidation using hydrogen peroxide (H₂O₂), peroxydisulfate (PDS), or peroxymonosulfate (PMS). Tests were performed in deionized water over very short treatment times (0–80 s). Also, standardized CLSI methods for antifungal sensitivity studies and morphological microscopic views were carried out. The fungus disinfection order was UVC/H₂O₂ > UVC/PDS > UVC/PMS > UVC. The photooxidation processes followed pseudo-first-order kinetics, with the highest rate constant for the UVC/H₂O₂ process. Direct oxidation, photoinactivation, and attacks of radical species were responsible for the inactivation of the antifungal-resistant microorganism. The fluconazole susceptibility of yeasts was significantly decreased (from 64 to 8 µg mL⁻¹) by the action of UVC/H₂O₂. A low reactivation in the dark and strong changes in the yeast morphology were found, indicating that the use of UVC light and radical-based processes is an effective alternative for fluconazole-resistant yeasts and could be promising to deal with hospital wastewater loaded with resistant fungi. Full article

Conidiobolus coronatus (Entomophthorales), a fungal pathogen with a broad insect host range, is a promising candidate for biocontrol applications. We sequenced a C. coronatus strain isolated from a Rhopalomyia sp. cadaver using PacBio long-read sequencing to elucidate the molecular basis of its wide host adaptability. The newly assembled 44.21 Mb genome exhibits high completeness (BUSCO score: 93.45%) and encodes 11,128 protein-coding genes, with 23.1% predicted to mediate pathogen–host interactions. Comparative genomics with the aphid-obligate pathogen C. obscurus revealed significant expansions in gene families associated with host adaptation mechanisms, including host recognition, transcriptional regulation, degradation of host components, detoxification, and immune evasion. Functional annotation highlighted enrichment in cellular component organization and energy metabolism. Pfam annotation identified one hundred twenty-five seven-transmembrane receptors (putative GPCRs), sixty-seven fungus-specific transcription factors, three hundred sixty-one peptidases (one hundred ninety-eight serine proteases and one hundred three metalloproteases), one hundred twenty-seven cytochrome P450 monooxygenases (P450s), thirty-five cysteine-rich secretory proteins, and fifty-five tyrosinases. Additionally, four hundred thirty carbohydrate-active enzymes (CAZymes) across six major modules were characterized. Untargeted metabolomics detected 22 highly expressed terpenoids, consistent with terpenoid biosynthesis gene clusters in the genome. Collectively, these expansions underpin the broad host range of C. coronatus by enabling cross-host signal decoding and gene expression reprogramming, breaching diverse host physicochemical barriers, and expanding its chemical ecological niche. This study provides genomic insights into broad host adaptability in entomopathogenic fungi, facilitating further understanding of pathogen–host interactions. Full article

Invasive fungal infections (IFIs) are one of the most significant public health challenges worldwide. Yet, research and communication thereof were left behind for a long time, until the WHO published a priority pathogens list to guide research, development, and public health action in October 2022. Indeed, due to the rising number of immunocompromised patients at risk and the high level of morbidity, mortality, and economic burden they entail, especially in low- and middle-income countries, IFIs are a serious public health threat. Fungal infections due to dimorphic fungi face additional challenges such as limited knowledge outside of endemic areas and restricted availability of antifungal molecules in areas affected by these infections. The number of related deaths per year is estimated at 2.5 million, but non-governmental organisations make a wider estimation, due to the difficulties in early in vitro diagnostic and troublesome collection and analysis of epidemiological data. Despite this fact, the therapeutic toolbox addressing these infections remains limited, with only four main families of molecules available so far. The antifungal therapeutic supply is composed of very toxic polyenes, the weakly selective and nearly unused 5-fluorocytosine, and azoles, some of which are becoming increasingly inefficient against IFIs. In the 2000–2020s, the fourth arising family consisted of safer semisynthetic echinocandins. Unfortunately, nowadays, more and more fungal isolates encountered in intensive care units exhibit a low susceptibility to echinocandins or are even multiresistant. In this review, we expose the current treatments available to fight against invasive fungal infections. We recall the discovery and physico-chemical aspects of these substances leading to structure/activity and structure/properties relationships. We particularly focus on the to-date resistances and their molecular mechanisms. We finally list some of the most relevant antifungal drug candidates, as they were freshly overviewed by the World Health Organization in April 2025, highlighting the importance of the molecular dimension of this pursuit toward the expansion of the antifungal therapeutic toolbox. Full article