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26 pages, 3010 KiB  
Article
Efficient Ionic Liquid-Based Leaching and Extraction of Metals from NMC Cathodes
by Jasmina Mušović, Danijela Tekić, Ana Jocić, Slađana Marić and Aleksandra Dimitrijević
Processes 2025, 13(6), 1755; https://doi.org/10.3390/pr13061755 - 2 Jun 2025
Viewed by 301
Abstract
The increasing demand for lithium-ion batteries (LIBs) and their limited lifespan emphasize the urgent need for sustainable recycling strategies. This study investigates the application of tetrabutylphosphonium-based ionic liquids (ILs) as alternative leaching agents for recovering critical metals, Li(I), Co(II), Ni(II), and Mn(II), from [...] Read more.
The increasing demand for lithium-ion batteries (LIBs) and their limited lifespan emphasize the urgent need for sustainable recycling strategies. This study investigates the application of tetrabutylphosphonium-based ionic liquids (ILs) as alternative leaching agents for recovering critical metals, Li(I), Co(II), Ni(II), and Mn(II), from spent NMC cathode materials. Initial screening experiments evaluated the leaching efficiencies of nine tetrabutylphosphonium-based ILs for Co(II), Ni(II), Mn(II), and Li(I), revealing distinct metal dissolution behaviors. Three ILs containing HSO4, EDTA2−, and DTPA3− anions exhibited the highest leaching performance and were selected for further optimization. Key leaching parameters, including IL and acid concentrations, temperature, time, and solid-to-liquid ratio, were systematically adjusted, achieving leaching efficiencies exceeding 90%. Among the tested systems, [TBP][HSO4] enabled near-complete metal dissolution (~100%) even at room temperature. Furthermore, an aqueous biphasic system (ABS) was investigated utilizing [TBP][HSO4] in combination with ammonium sulfate, enabling the complete extraction of all metals into the salt-rich phase while leaving the IL phase metal-free and potentially suitable for reuse, indicating the feasibility of integrating leaching and extraction into a continuous, interconnected process. This approach represents a promising step forward in LIB recycling, highlighting the potential for sustainable and efficient integration of leaching and extraction within established hydrometallurgical frameworks. Full article
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19 pages, 3850 KiB  
Article
Effects of Salinity Stress on Grasspea (Lathyrus sativus L.) and Its Wild Relatives: Morpho-Physiological Insights at the Seedling Stage
by Khawla Aloui, Outmane Bouhlal, Hasnae Choukri, Priyanka Gupta, Keltoum El Bouhmadi, Noureddine El Haddad, Khadija El Bargui, Fouad Maalouf and Shiv Kumar
Plants 2025, 14(11), 1666; https://doi.org/10.3390/plants14111666 - 30 May 2025
Viewed by 241
Abstract
Salinity is a critical abiotic stress influencing plant growth. However, its effect on grasspea (Lathyrus sativus L.) remains insufficiently explored. The present study screened 24 germplasm accessions representing 11 Lathyrus species at the seedling stage at 0, 100, and 150 mM NaCl [...] Read more.
Salinity is a critical abiotic stress influencing plant growth. However, its effect on grasspea (Lathyrus sativus L.) remains insufficiently explored. The present study screened 24 germplasm accessions representing 11 Lathyrus species at the seedling stage at 0, 100, and 150 mM NaCl concentrations using a hydroponic system. Our findings indicated that salt stress had a significant effect on all assessed traits, including a reduction in relative leaf water content and SPAD index, a decline in the length and biomass of shoots and roots, and an elevation in their corresponding dry contents. The grasspea accessions displayed a wide range of responses to salt stress. This variation allowed the identification of nine tolerant accessions at both stress levels, belonging to cultivated and wild relative species, specifically LAT 495, IG 65117, L.OCH, IG 65273, IG 64931, IG 114526, IG 64892, IG 66065, and IG 65018. Four accessions, namely IG 110632, IG 114531, IG 65133, and IG 66026, demonstrated tolerance only at 100 mM NaCl concentration. Through identifying these promising accessions, our research offers crucial insights for the initial screening of tolerant genotypes in grasspea, setting the stage for further studies to decipher the intricate mechanisms of salinity tolerance in these accessions. Full article
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18 pages, 2677 KiB  
Article
The Aerobic Denitrification Characteristics of a Halophilic Marinobacter sp. Strain and Its Application in a Full-Scale Fly Ash-Washing Wastewater Treatment Plant
by Mengyang Guo, Kai Liu, Hongfei Wang, Yilin Song, Yingying Li, Weijin Zhang, Jian Gao and Mingjun Liao
Microorganisms 2025, 13(6), 1274; https://doi.org/10.3390/microorganisms13061274 - 30 May 2025
Viewed by 194
Abstract
To date, the nitrogen metabolism pathways and salt-tolerance mechanisms of halophilic denitrifying bacteria have not been fully studied, and full-scale engineering trials with saline fly ash-washing wastewater have not been reported. In this study, we isolated and screened a halophilic denitrifying bacterium ( [...] Read more.
To date, the nitrogen metabolism pathways and salt-tolerance mechanisms of halophilic denitrifying bacteria have not been fully studied, and full-scale engineering trials with saline fly ash-washing wastewater have not been reported. In this study, we isolated and screened a halophilic denitrifying bacterium (Marinobacter sp.), GH-1, analyzed its nitrogen metabolism pathways and salt-tolerance mechanisms using whole-genome data, and explored its nitrogen removal characteristics under both aerobic and anaerobic conditions at different salinity levels. GH-1 was then applied in a full-scale engineering project to treat saline fly ash-washing leachate. The main results were as follows: (1) Based on the integration of whole-genome data, it is preliminarily hypothesized that the strain possesses complete nitrogen metabolism pathways, including denitrification, a dissimilatory nitrate reduction to ammonium (DNRA), and ammonium assimilation, as well as the following three synergistic strategies through which to counter hyperosmotic stress: inorganic ion homeostasis, organic osmolyte accumulation, and structural adaptations. (2) The strain demonstrated effective nitrogen removal under aerobic, anaerobic, and saline conditions (3–9%). (3) When applied in a full-scale engineering system treating saline fly ash-washing wastewater, it improved nitrate nitrogen (NO3-N), total nitrogen (TN), and chemical oxygen demand (COD) removal efficiencies by 31.92%, 25.19%, and 31.8%, respectively. The proportion of Marinobacter sp. increased from 0.73% to 3.41% (aerobic stage) and 2.86% (anoxic stage). Overall, halophilic denitrifying bacterium GH-1 can significantly enhance the nitrogen removal efficiency of saline wastewater systems, providing crucial guidance for biological nitrogen removal treatment. Full article
(This article belongs to the Section Environmental Microbiology)
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21 pages, 9801 KiB  
Article
Correction of a Traffic-Defective Missense ABCB11 Variant Responsible for Progressive Familial Intrahepatic Cholestasis Type 2
by Martine Lapalus, Elodie Mareux, Rachida Amzal, Emmanuelle Drège, Yosra Riahi, Sylvain Petit, Manon Banet, Thomas Falguières, Isabelle Callebaut, Bruno Figadère, Delphine Joseph, Emmanuel Gonzales and Emmanuel Jacquemin
Int. J. Mol. Sci. 2025, 26(11), 5232; https://doi.org/10.3390/ijms26115232 - 29 May 2025
Viewed by 102
Abstract
Progressive familial intrahepatic cholestasis type 2 (PFIC2) is a severe hepatocellular cholestasis due to biallelic variations in the ABCB11 (ATP-binding cassette B11) gene encoding the canalicular bile salt export pump (BSEP). Some missense variants identified in patients with PFIC2 do not traffic properly [...] Read more.
Progressive familial intrahepatic cholestasis type 2 (PFIC2) is a severe hepatocellular cholestasis due to biallelic variations in the ABCB11 (ATP-binding cassette B11) gene encoding the canalicular bile salt export pump (BSEP). Some missense variants identified in patients with PFIC2 do not traffic properly to the canalicular membrane. However, 4-phenybutyrate (4-PB) has been shown in vitro to partially correct the mis-trafficking of selected variants, resulting in an improvement of the medical conditions of corresponding PFIC2 patients. Herein, we report the ability of 4-PB analogous or homologous drugs and of non-4-PB related chemical correctors to rescue the canalicular expression and the activity of the folding-defective Abcb11R1128C variant. New compounds, either identified by screening a chemical library or designed by structural homology with 4-PB (or its metabolites) and synthesized, were evaluated in vitro for their ability to (i) correct the canalicular localization of Abcb11R1128C after transfection in hepatocellular polarized cell lines; (ii) restore the 3H-taurocholate transport of the Abcb11R1128C protein in Madin–Darby canine kidney (MDCK) cells stably co-expressing Abcb11 and the sodium taurocholate co-transporting polypeptide (Ntcp/Slc10A1). Glycerol phenylbutyrate (GPB), phenylacetate (PA, the active metabolite of 4-PB), 3-hydroxy-2-methyl-4-phenylbutyrate (HMPB, a 4-PB metabolite analog chemically synthesized in our laboratory) and 4-oxo-1,2,3,4-tetrahydro-naphthalene-carboxylate (OTNC, from the chemical library screening) significantly increased the proportion of canalicular Abcb11R1128C protein. GPB, PA, ursodeoxycholic acid (UDCA), alone or in combination with 4-PB, suberoylanilide hydroxamic acid (SAHA), C18, VX-445, and/or VX-661, significantly corrected both the traffic and the activity of Abcb11R1128C. Such correctors could represent new pharmacological insights for improving the condition of patients with ABCB11 deficiency due to missense variations affecting the transporter’s traffic. Full article
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
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19 pages, 2215 KiB  
Article
Multi-Method Combined Screening of Agarase-Secreting Fungi from Sea Cucumber and Preliminary Analyses on Their Agarases and Agar-Oligosaccharide Products
by Shuting He, Tiantian Lu, Xiaoyu Sun, Fangfang Ban, Longjian Zhou, Yayue Liu, Yan Feng and Yi Zhang
Microorganisms 2025, 13(6), 1235; https://doi.org/10.3390/microorganisms13061235 - 28 May 2025
Viewed by 77
Abstract
Agar can be degraded into agar-oligosaccharides by physical, chemical, and biological methods, but the further industrial application of agar-oligosaccharides has been limited by the environmental pollution of traditional agar-oligosaccharides preparation methods and the lack of novel agarase. In this study, we reported the [...] Read more.
Agar can be degraded into agar-oligosaccharides by physical, chemical, and biological methods, but the further industrial application of agar-oligosaccharides has been limited by the environmental pollution of traditional agar-oligosaccharides preparation methods and the lack of novel agarase. In this study, we reported the screening of 12 strains with agar-degrading activity from sea cucumber intestine and mucus using a combination of Gram’s iodine staining and 3,5-dinitrosalicylic acid (DNS) method, during which five fungal strains exhibited high agarase activity. Their production of different agarases and agar-oligosaccharides could be visualized by zymogram assay and thin-layer chromatography. A strain ACD-11-B with the highest agarase activity showed 99.79% similarity to Aspergillus sydowii CBS593.65 for ITS rDNA sequence. Strain ACD-11-B produced five possible agarases with predicted molecular weights of 180, 95, 43, 33, and 20 kDa, approximately. The optimal temperature and pH of the crude enzyme production by strain ACD-11-B were 40 °C and 6.0. The crude enzyme was stable at 30 °C, and Ca2+, K+, and Na+ could increase the activity of the crude enzyme. Its agarases demonstrated remarkable salt tolerance and substrate specificity, with neoagarobiose (NA2) identified as the main degradation product. These results indicate that the fungal strain ACD-11-B can secrete agarases with potential in industrial applications, making it a new producer strain for agarase production. Full article
(This article belongs to the Section Microbial Biotechnology)
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18 pages, 1103 KiB  
Review
Salinity Tolerance in Wheat: Mechanisms and Breeding Approaches
by Indrila Dey Traye, Nur Mohammod Oli, Xuelian Weng, Ke Li, Mohamed Suliman Eltyeb Suliman, Xiaoqian Guo, Guisheng Zhou, Guanglong Zhu and Yunji Xu
Plants 2025, 14(11), 1641; https://doi.org/10.3390/plants14111641 - 27 May 2025
Viewed by 150
Abstract
High salinity and other abiotic stressors severely limit the productivity of wheat (Triticum aestivum L.). Wheat is a moderately salt-tolerant crop, and its salinity tolerance has been extensively studied due to the fact that it is one of the most essential food [...] Read more.
High salinity and other abiotic stressors severely limit the productivity of wheat (Triticum aestivum L.). Wheat is a moderately salt-tolerant crop, and its salinity tolerance has been extensively studied due to the fact that it is one of the most essential food crops. It is essential to comprehend the mechanisms underlying salinity tolerance and create adaptable wheat types. In this paper, the morphological adaptations in wheat were first introduced under salinity stress, then the main physiological, biochemical and molecular reactions of wheat to salinity stress were summarized in detail. In addition, the advances in breeding approaches to salinity tolerance in wheat through germplasm evaluation, screening and gene editing were generally reviewed. Finally, proposals for further research or possible challenges in this process were also discussed. Our review will provide references for improving salt tolerance of wheat and for breeding salt-tolerant varieties. Full article
(This article belongs to the Section Crop Physiology and Crop Production)
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21 pages, 4042 KiB  
Article
Screening, Identification, and Application of Superior Starter Cultures for Fermented Sausage Production from Traditional Meat Products
by Zijie Dong, Longfei Wang, Yanzheng Ge, Yongqiang An, Xiaoxue Sun, Ke Xue, Haoyang Xie, Ran Wang, Junguang Li and Lishui Chen
Fermentation 2025, 11(6), 306; https://doi.org/10.3390/fermentation11060306 - 27 May 2025
Viewed by 275
Abstract
In this study, 43 strains of Staphylococcus spp. and 22 strains of lactic acid bacteria (LAB), isolated from six representative fermented meat products (domestic and international), were subjected to a comprehensive safety evaluation, including hemolytic activity, catalase test, hydrogen sulfide production, and antibiotic [...] Read more.
In this study, 43 strains of Staphylococcus spp. and 22 strains of lactic acid bacteria (LAB), isolated from six representative fermented meat products (domestic and international), were subjected to a comprehensive safety evaluation, including hemolytic activity, catalase test, hydrogen sulfide production, and antibiotic susceptibility screening. Nine strains were selected for secondary screening based on safety criteria, fermentation characteristics, and acid and salt tolerance tests. Two optimal strains were identified—Staphylococcus saprophyticus LH-5 and Latilactobacillus sakei OFN-11—demonstrating excellent compatibility and no mutual antagonism. Both strains were non hemolytic, catalase positive, susceptible to some of the antibiotic tested, and did not produce hydrogen sulfide, mucus, or gas. These favorable fermentation characteristics included lipase/protease production, amino acid decarboxylase negativity, and salt and acid tolerance. Application experiments in fermented sausages were analyzed for 55 volatile compounds, related to meaty, fruity, and fatty aroma profiles compared to commercial starter cultures. The formulation including the selected strains exhibited lower acidity than its commercial unterparts while maintaining superior sensory and physicochemical attributes. These findings suggest that the S. saprophyticus LH-5 and L. sakei OFN-11 consortium holds promising potential as a starter culture for fermented meat products, offering technological advantages to become a fermentation agent that meets the preferences of Chinese consumers. Full article
(This article belongs to the Section Fermentation for Food and Beverages)
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19 pages, 2884 KiB  
Article
Residual Impacts of Vermicompost-Derived Nutrients on a Strawberry–Corn Double Cropping System Under Plasticulture in South Florida
by Ivan Oyege and Maruthi Sridhar Balaji Bhaskar
Environments 2025, 12(5), 171; https://doi.org/10.3390/environments12050171 - 21 May 2025
Viewed by 418
Abstract
The increasing demand for sustainable agricultural practices necessitates strategies such as organic fertilizer alternatives and residual nutrient use to enhance crop productivity while maintaining soil health. This study investigates the residual effects of vermicompost on strawberry growth and physiology after a corn cropping [...] Read more.
The increasing demand for sustainable agricultural practices necessitates strategies such as organic fertilizer alternatives and residual nutrient use to enhance crop productivity while maintaining soil health. This study investigates the residual effects of vermicompost on strawberry growth and physiology after a corn cropping cycle. The objectives were to assess how different vermicompost application rates impact strawberry yield, biomass, chlorophyll content, and fruit quality. The experiment was conducted over six months, using raised beds previously cultivated with corn and treated with six nutrient management strategies, namely, V0 (control), VC1, VCT100, VC1+VCT50, VC3, and VC3+VCT50. Metrics such as SPAD values, Brix sugar content, and stomatal conductance were measured throughout the growing season to assess physiological responses. Soil and plant chemical concentrations were determined at the end of the study to evaluate nutrient status. Results showed that the VC1 treatment produced the highest yield (11,573 kg/acre) and biomass (38,364 kg/acre), with significantly improved fruit quality (Brix sugar content of 8.3%) compared to the control (6.8%). SPAD values declined over time and showed no statistically significant differences among treatments. In the surface soil, VC3+VCT50 exhibited the highest N, P, Mg, Na, organic matter, and cation exchange capacity (CEC), and it also resulted in the highest leaf N. Leaves had higher N, P, K, and Mg concentrations, while Fe, Mn, and Cu were more concentrated in roots. Spectral reflectance data indicated reduced chlorophyll content in the VC3+VCT50-treated plants. These findings suggest that moderate vermicompost applications, such as VC1, can significantly contribute to sustainable agriculture by enhancing strawberry productivity and reducing dependence on synthetic fertilizers. However, high-rate applications, especially VC3 and VC3+VCT50, reduced plant vigor and yield, possibly due to salinity stress and the high sodium content in the vermicompost used in this study. Such outcomes may vary depending on feedstock composition, highlighting the importance of salinity screening when using organic amendments in salt-sensitive crops like strawberries. Full article
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81 pages, 13040 KiB  
Review
Thermochemical Energy Storage Based on Salt Hydrates: A Comprehensive Review
by Tomasz Spietz, Rafał Fryza, Janusz Lasek and Jarosław Zuwała
Energies 2025, 18(10), 2643; https://doi.org/10.3390/en18102643 - 20 May 2025
Viewed by 335
Abstract
Thermal energy storage technologies are essential for balancing energy demand and supply. There are three main types: sensible heat, latent heat, and thermochemical energy storage. Among them, thermochemical energy storage offers the highest energy density (1–3 GJ/m3) and long-term storage capability. [...] Read more.
Thermal energy storage technologies are essential for balancing energy demand and supply. There are three main types: sensible heat, latent heat, and thermochemical energy storage. Among them, thermochemical energy storage offers the highest energy density (1–3 GJ/m3) and long-term storage capability. Salt hydrates have attracted attention as energy storage materials due to their low cost, wide availability, and operating temperatures being well-suited for residential and low-temperature applications. This review focuses on the use of salt hydrates in sorption-based thermochemical energy storage systems. It summarizes the current state of knowledge, including screening studies of various salt hydrates, their thermodynamic and operational limitations, advantages, and performance in composite materials. This review also covers recent projects and common reactor designs used in TCES applications. Based on the literature analysis, the most promising salt hydrates for sorption-based TCES systems include SrCl2, SrBr2, K2CO3, MgSO4, MgCl2, and CaCl2. Despite the high theoretical energy density of many salt hydrates, future work should focus on experimental studies in large-scale reactor systems to better evaluate the practical discharge behavior of the energy storage system beyond theoretical hydration enthalpies or small-scale thermal analyses. Full article
(This article belongs to the Section D: Energy Storage and Application)
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18 pages, 3579 KiB  
Article
Screening and Characterization of Marine Bacillus atrophaeus G4 Protease and Its Application in the Enzymatic Hydrolysis of Sheep (Ovis aries) Placenta for the Preparation of Antioxidant Peptides
by Wei Wang, Guoqing Peng, Jingjing Sun, Chengcheng Jiang, Jianhua Hao and Xiu Zhang
Molecules 2025, 30(10), 2217; https://doi.org/10.3390/molecules30102217 - 20 May 2025
Viewed by 206
Abstract
Proteolytic enzymes, which play a crucial role in peptide bond cleavage, are widely applied in various industries. In this study, protease-producing bacteria were isolated and characterized from marine sediments collected from the Yellow Sea, China. Comprehensive screening and 16S rDNA sequencing identified a [...] Read more.
Proteolytic enzymes, which play a crucial role in peptide bond cleavage, are widely applied in various industries. In this study, protease-producing bacteria were isolated and characterized from marine sediments collected from the Yellow Sea, China. Comprehensive screening and 16S rDNA sequencing identified a promising G4 strain as Bacillus atrophaeus. Following meticulous optimization of fermentation conditions and medium composition via response surface methodology, protease production using strain G4 was significantly enhanced by 64%, achieving a yield of 3258 U/mL. The G4 protease exhibited optimal activity at 50 °C and pH 7.5, demonstrating moderate thermal stability with 52% residual activity after 30-min incubation at 50 °C—characteristics typical of an alkaline protease. Notably, the enzyme retained over 79% activity across a broad pH range (6–11) and exhibited excellent salt tolerance, maintaining over 50% activity in a saturated NaCl solution. Inhibition by phenylmethylsulfonyl fluoride, a serine protease inhibitor, confirmed its classification as a serine protease. The enzyme’s potential in generating bioactive peptides was further demonstrated through hydrolysis of sheep (Ovis aries) placenta, resulting in a hydrolysate with notable antioxidant properties. The hydrolysate exhibited a 64% superoxide anion scavenging activity, surpassing that of reduced glutathione. These findings expand the current understanding of Bacillus atrophaeus G4 proteases and provide a foundation for innovative sheep placenta utilization with potential industrial applications. Full article
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19 pages, 7698 KiB  
Article
Environmental Assessment of a Heritage Forest Urban Park on the Densely Populated Coast of Versilia, Italy
by Roberto Giannecchini, Lisa Ghezzi, Simone Arrighi, Silvia Fornasaro, Stefania Giannarelli, Alessio Pardini and Riccardo Petrini
Water 2025, 17(10), 1466; https://doi.org/10.3390/w17101466 - 13 May 2025
Viewed by 324
Abstract
The present study focuses on the sources and spatial distribution of potentially toxic elements (PTEs) and organic pollutants in water, canal bed sediment, and soil in the Versiliana urban park, an inclusive green area near the coast in the densely populated Versilia Plain [...] Read more.
The present study focuses on the sources and spatial distribution of potentially toxic elements (PTEs) and organic pollutants in water, canal bed sediment, and soil in the Versiliana urban park, an inclusive green area near the coast in the densely populated Versilia Plain of Tuscany. Surface water and bed sediments from canals crossing the urban park were collected at 10 stations during four different surveys to account for hydrological seasonality. Groundwater was collected in a survey through 10 piezometers. Eleven shallow soil samples were also collected, with the aim of evaluating the potential release of pollutants. Groundwater ranged from Ca-HCO3, to NaCl, CaCl2, and Na-HCO3 water types, indicating conservative mixing and cation exchange processes during seawater intrusion. Most waters from canals belonged to the Ca-HCO3 hydrofacies; a salinization shift, due to hydraulic connection with saline groundwater and soil sea salt dissolution, is observed. The concentration of most PTEs in groundwater and canal water is below Italian regulatory thresholds, with the only exception being As, which exceeds the legal limit in some samples. In most sediments, Ni, Cr, Zn, and As exceed the threshold effect concentration, and in some cases, the probable effect concentration. Geogenic PTE sources are attributed to metalliferous mineralization that characterizes the upstream Versilia River basin catchment. However, local PTE inputs from vehicular emissions and local industrial activities have been highlighted. Arsenic in sediments originated from geogenic sources and from arsenical pesticides, as indicated by the analysis of organic compounds, highlighting the legacy of the use of organic pesticides that have settled in bed sediments, in particular malathion and metalaxyl. The arsenic risk-based screening level in soil is lower compared with the regulatory threshold and with the measured concentration. Full article
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18 pages, 2432 KiB  
Article
NAC Transcription Factor GmNAC035 Exerts a Positive Regulatory Role in Enhancing Salt Stress Tolerance in Plants
by Wanting Shi, Sixin Ye, Yiting Xin, Hongmiao Jin, Meiling Hu, Yueping Zheng, Yihua Zhan, Hongbo Liu, Yi Gan, Zhifu Zheng and Tian Pan
Plants 2025, 14(9), 1391; https://doi.org/10.3390/plants14091391 - 5 May 2025
Viewed by 401
Abstract
Soybean, a globally significant and versatile crop, serves as a vital source of both oil and protein. However, environmental factors such as soil salinization pose substantial challenges to its cultivation, adversely affecting both yield and quality. Enhancing the salt tolerance of soybeans can [...] Read more.
Soybean, a globally significant and versatile crop, serves as a vital source of both oil and protein. However, environmental factors such as soil salinization pose substantial challenges to its cultivation, adversely affecting both yield and quality. Enhancing the salt tolerance of soybeans can mitigate yield losses and promote the development of the soybean industry. Members of the plant-specific transcription factor family NAC play crucial roles in plant adaptation to abiotic stress conditions. In this study, we screened the soybean GmNAC family genes potentially involved in the salt stress response and identified 18 GmNAC genes that may function during the early stages of salt stress. Among these, the GmNAC035 gene exhibited a rapid increase in expression within one hour of salt treatment, with its expression being induced by abscisic acid (ABA) and methyl jasmonate (MeJA), suggesting its significant role in the soybean salt stress response. We further elucidated the role of GmNAC035 in soybean salt tolerance. GmNAC035, a nuclear-localized transcriptional activator, enhances salt tolerance when overexpressed in Arabidopsis, reducing oxidative damage and boosting the expression of stress-responsive genes. It achieves this by regulating key stress response pathways, including the SOS pathway, calcium signaling, and ABA signaling. These findings highlight the potential of GmNAC035 as a genetic engineering target to improve crop salt tolerance. Full article
(This article belongs to the Special Issue Crop Functional Genomics and Biological Breeding—2nd Edition)
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20 pages, 3683 KiB  
Article
Microbiota Analysis and Characterisation of the Novel Limosilactobacillus Strains Isolated from Dogs
by Ga-Yeong Lee, Hae-Yeon Jo, Muhammad Aleem Abbas, Ling Gui, Md Sekendar Ali, Seung-Jun Kim and Seung-Chun Park
Microorganisms 2025, 13(5), 1059; https://doi.org/10.3390/microorganisms13051059 - 1 May 2025
Viewed by 286
Abstract
Background/Objectives: The growing number of households with companion dogs raises concerns. Co-living environments between companion dogs and their owners are linked to a heightened risk of cross-infections from strains such as Escherichia coli (E. coli), Staphylococcus aureus (S. aureus), [...] Read more.
Background/Objectives: The growing number of households with companion dogs raises concerns. Co-living environments between companion dogs and their owners are linked to a heightened risk of cross-infections from strains such as Escherichia coli (E. coli), Staphylococcus aureus (S. aureus), Salmonella, and faecal coliforms. Therefore, this study aims to propose measures for healthy cohabitation by analysing the faecal microbiota of puppies and adult dogs. Methods: We isolated lactic acid bacteria (LAB) from their faeces and assessed their potential to inhibit E. coli, S. aureus, and Salmonella spp. Faecal samples from puppies (<2 months old) and adult dogs (>12 months old) were analysed and compared. Results: The analysis revealed that Lactobacillus dominated puppy faeces, while Bacteroidetes were more abundant in adult dogs. In total, 109 primary LAB candidates were isolated from faecal samples. These isolates underwent secondary screening for acid tolerance, bile salt resistance, acid production, heat resistance, protease activity, and antimicrobial activity against E. coli, S. aureus, and Salmonella spp. Five secondary LAB candidates with probiotic potential were further characterised via morphological and genetic analysis. All five strains were Lactobacillus reuteri, with L. reuteri JJ37, JJ68, JJ69, JJ71, and JJ77 emerging as the final probiotic candidates. Conclusions: They promote healthier cohabitation between dogs and their owners. Full article
(This article belongs to the Special Issue Advances in Veterinary Microbiology)
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19 pages, 33327 KiB  
Article
Genome-Wide Characterization and Analysis of the FH Gene Family in Medicago truncatula Under Abiotic Stresses
by Jiatong Wang and Chunyang Zhou
Genes 2025, 16(5), 555; https://doi.org/10.3390/genes16050555 - 1 May 2025
Viewed by 394
Abstract
Background: The formin family proteins play an important role in guiding the assembly and nucleation of linear actin and can promote the formation of actin filaments independently of the Arp2/3 complex. As a key protein that regulates the cytoskeleton and cell morphological structure, [...] Read more.
Background: The formin family proteins play an important role in guiding the assembly and nucleation of linear actin and can promote the formation of actin filaments independently of the Arp2/3 complex. As a key protein that regulates the cytoskeleton and cell morphological structure, the formin gene family has been widely studied in plants such as Arabidopsis thaliana and rice. Methods: In this study, we conducted comprehensive analyses, including phylogenetic tree construction, conserved motif identification, co-expression network analysis, and transcriptome data mining. Results: A total of 18 MtFH gene family members were identified, and the distribution of these genes on chromosomes was not uniform. The phylogenetic tree divided the FH proteins of the four species into two major subgroups (Clade I and Clade II). Notably, Medicago truncatula and soybean exhibited closer phylogenetic relationships. The analysis of cis-acting elements revealed the potential regulatory role of the MtFH gene in light response, hormone response, and stress response. GO enrichment analysis again demonstrated the importance of FH for reactions such as actin nucleation. Expression profiling revealed that MtFH genes displayed significant transcriptional responsiveness to cold, drought, and salt stress conditions. And there was a temporal complementary relationship between the expression of some genes under stress. The protein interaction network indicated an interaction relationship between MtFH protein and profilin, etc. In addition, 22 miRNAs were screened as potential regulators of the MtFH gene at the post-transcriptional level. Conclusions: In general, this study provides a basis for deepening the understanding of the physiological function of the MtFH gene and provides a reference gene for stress resistance breeding in agricultural production. Full article
(This article belongs to the Section Plant Genetics and Genomics)
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22 pages, 5187 KiB  
Article
Genome-Wide Analysis of the MsRCI2 Gene Family in Medicago sativa and Functional Characterization of MsRCI2B in Salt Tolerance
by Huiru Qiao, Depeng Zhang, Zizhao Zhang, Jing Meng, Pin He, Shichao Zhang, Yan Wang, Hua Cai and Yong Li
Int. J. Mol. Sci. 2025, 26(9), 4165; https://doi.org/10.3390/ijms26094165 - 27 Apr 2025
Viewed by 419
Abstract
The Rare Cold-Inducible 2 (RCI2) gene encodes a conserved hydrophobic peptide that plays a crucial role in ion homeostasis, membrane stability, and responses to abiotic stress. In this study, six members of the MsRCI2 gene family were identified in Medicago sativa [...] Read more.
The Rare Cold-Inducible 2 (RCI2) gene encodes a conserved hydrophobic peptide that plays a crucial role in ion homeostasis, membrane stability, and responses to abiotic stress. In this study, six members of the MsRCI2 gene family were identified in Medicago sativa L., all of which contain highly conserved PMP3 domains. Comparative collinearity analysis revealed syntenic relationships between M. sativa and M. truncatula, with each gene displaying distinct expression profiles under various stress conditions. Among them, MsRCI2B was significantly upregulated in response to salt stress. Alfalfa plants overexpressing MsRCI2B exhibited enhanced salt tolerance, as evidenced by increased antioxidant enzyme activities and reduced accumulation of malondialdehyde (MDA), hydrogen peroxide (H2O2), and superoxide anion (O2) compared to wild-type plants. Furthermore, the transgenic lines maintained better Na⁺/K⁺ homeostasis under salt stress, reflected by a lower Na⁺/K⁺ ratio and significantly elevated expression of key ion transport genes, including MsSOS1, MsAKT1, and MsNHX1. To elucidate the molecular mechanisms underlying MsRCI2B function, a yeast two-hybrid (Y2H) screen identified 151 potential interacting proteins. Gene Ontology (GO) enrichment analysis revealed that these interactors are mainly involved in antioxidant defense and ion transport. Further validation confirmed direct interactions between MsRCI2B and both calmodulin (CaM) and vacuola H⁺-ATPase (V-H⁺-ATPase), suggesting that MsRCI2B contributes to ion homeostasis through interactions with CaM and V-H⁺-ATPase, thereby promoting Na⁺/K⁺ balance and enhancing salt tolerance. These findings provide new insights into the role of MsRCI2B in salt stress responses and underscore its potential as a genetic target for enhancing salinity tolerance in forage crops. Full article
(This article belongs to the Special Issue Molecular and Physiological Analysis of Stress in Plants)
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