Isolation and Structure Identification of Novel Brominated Diketopiperazines from Nocardia ignorata—A Lichen-Associated Actinobacterium
Abstract
:1. Introduction
2. Results and Discussion
2.1. Chemical Profiling of Extracts and Purification
2.2. Structural Determination of Diketopiperazines 6 and 7
2.2.1. Structural Analysis
2.2.2. Synthesis
2.3. Cytotoxic Activity
3. Materials and Methods
3.1. General Experimental Procedures
3.2. Microorganism
3.3. Fermentation of Nocardia ignorata DP94
3.4. Mass Spectrometry Analysis
3.5. Extraction and Isolation
3.6. Biological Assays: Cytotoxic Activities
3.7. Preparation of l-Bromo-Tyrosine (10)
3.8. Protection of the Amine Group (11)
3.9. Condensation of the Amino Acids
3.10. Deprotection and Cyclization
3.11. Analytical Data
4. Conclusions
Supplementary Materials
Acknowledgments
Author Contributions
Conflicts of Interest
References
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- Sample Availability: Samples of the compounds 6, 7, 13a and 13b are available from the authors.
No. | 6 | 7 | ||
---|---|---|---|---|
δH (J in Hz) | δC | δH (J in Hz) | δC | |
1 | - | - | - | - |
2 | - | 167.3 | - | 166.7 |
3 | 4.14, t (4.7) | 59.8 | 4.38, td (4.7, 2.0) | 57.7 |
4 | - | - | - | - |
5 | - | 171.1 | - | 170.7 |
6 | 2.82, m | 59.3 | 4.07, ddd (10.9, 6.3, 2.0) | 60.0 |
7 | 1.70, m | 29.9 | 1.25, m | 29.5 |
2.12, m | 2.13, m | |||
8 | 1.95, m 1.70, m | 22.5 | 1.84, m | 22.6 |
9 | 3.36, m | 46.2 | 3.38, m | 45.9 |
3.56, m | 3.57, m | |||
10 | 2.88, dd (13.9, 4.9) | 39.7 | 2.99, dd (14.2, 4.7) | 37.1 |
3.09, dd (13.9, 4.9) | 3.13, dd (14.2, 4.7) | |||
11 | - | 128.9 | - | 129.6 |
12 | 6.98, dd (8.2, 2.1) | 131.3 | 7.03, dd (8.3, 2.2) | 131.4 |
13 | 6.83, d (8.2) | 117.2 | 6.81, d (8.3) | 116.9 |
14 | - | 110.8 | - | 110.6 |
15 | - | 155.0 | - | 154.5 |
16 | 7.29, d (2.1) | 135.5 | 7.35, d (2.2) | 135.4 |
Compounds | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 13a | 13b | |
---|---|---|---|---|---|---|---|---|---|---|---|
IC50 (µg/mL) | HaCaT | >200 | >200 | >200 | >200 | >200 | >200 | >200 | 79 ± 6 | >200 | 7 ± 2.5 |
B16 | >200 | >200 | >200 | >200 | >200 | >200 | >200 | 72 ± 6 | >200 | 18 ± 5 |
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Noël, A.; Ferron, S.; Rouaud, I.; Gouault, N.; Hurvois, J.-P.; Tomasi, S. Isolation and Structure Identification of Novel Brominated Diketopiperazines from Nocardia ignorata—A Lichen-Associated Actinobacterium. Molecules 2017, 22, 371. https://doi.org/10.3390/molecules22030371
Noël A, Ferron S, Rouaud I, Gouault N, Hurvois J-P, Tomasi S. Isolation and Structure Identification of Novel Brominated Diketopiperazines from Nocardia ignorata—A Lichen-Associated Actinobacterium. Molecules. 2017; 22(3):371. https://doi.org/10.3390/molecules22030371
Chicago/Turabian StyleNoël, Alba, Solenn Ferron, Isabelle Rouaud, Nicolas Gouault, Jean-Pierre Hurvois, and Sophie Tomasi. 2017. "Isolation and Structure Identification of Novel Brominated Diketopiperazines from Nocardia ignorata—A Lichen-Associated Actinobacterium" Molecules 22, no. 3: 371. https://doi.org/10.3390/molecules22030371
APA StyleNoël, A., Ferron, S., Rouaud, I., Gouault, N., Hurvois, J. -P., & Tomasi, S. (2017). Isolation and Structure Identification of Novel Brominated Diketopiperazines from Nocardia ignorata—A Lichen-Associated Actinobacterium. Molecules, 22(3), 371. https://doi.org/10.3390/molecules22030371