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Article

Investigation of Grignard Reagent as an Advanced Base for Aza-Claisen Rearrangement

1
College of Pharmacy, Research Institute of Pharmaceutical Sciences, Gyeongsang National University, Jinju daero, Jinju, Gyeongnam 52828, Korea
2
Division of Life Science, Division of Applied Life Science (BK21 Plus), Research Institute of Natural Science, Gyeongsang National University, Jinju 52828, Korea
*
Author to whom correspondence should be addressed.
Molecules 2019, 24(24), 4597; https://doi.org/10.3390/molecules24244597
Submission received: 7 November 2019 / Revised: 9 December 2019 / Accepted: 12 December 2019 / Published: 16 December 2019

Abstract

:
Employing iPrMgCl as an advanced base instead of lithium hexamethyldisilazane (LHMDS) resulted in dramatic improvements in aza-Claisen rearrangement. This advance is considered responsible for the increased bulkiness of the alkoxide moiety (including magnesium cation and ligands), followed by a resultant conformational change of the transition state. To support this hypothesis, various substrates of aza-Claisen rearrangement were prepared and screened. In addition, a molecular dynamic simulation study was performed to investigate and compare the structural stability of reaction intermediates.

1. Introduction

Azacycles, nitrogen containing cyclic molecules, has important biological activity and synthetic utility [1]. Various conversions of azacycle skeletons have contributed to the construction of alkaloid frameworks and the development of important synthetic methodologies (the aza-Cope rearrangement [2], transannulation [3], Diels–Alder cycloaddition [4], and so on [5]). However, their synthetic applications require further development to improve chemical yields, handling, and substrate generality. Aza-Claisen rearrangement (ACR) is one of these methodologies [6]. The [3,3]-sigmatropic rearrangement of nitrogen containing a diene moiety serves as a robust platform to introduce various alkaloid skeletons into natural products or active pharmaceutical ingredients (APIs) [7]. More importantly, with ACR employed, chiral communication and induction of remote stereogenic centers were also reported in a highly selective manner [8,9] (Figure 1). However, this type of rearrangement also requires harsh reaction conditions and at times results in low yields [10].
ACR proceeds through deprotonation, [3,3]-sigmatropic rearrangement, and protonation, as shown in Figure 2. For this process, both a strong base for deprotonation of α-hydrogen in an amide group and a high temperature for thermal rearrangement are required [11,12]. However, this reaction condition also permits sigma-bond rotation in amide enolate to hamper generation of the desired conformation. If the undesired conformation exists as a major form, ACR would be impossible (low conversion), and an ensuing side reaction would occur (side product). Because the oxygen–metal bond may play an important role in this enolate conformation, it can be presumed that the cation of a base determines a successful ACR process. Actually, it was shown that lithium hexamethyldisilazane (LHMDS) and iPrMgCl gave different results in the ACR of an API synthesis [13].
Inspired by this base-dependent ACR, we tried to apply this methodology to a more general substrate. It was expected that controlling an amide enolate conformation’s equilibrium through various enolate moieties, including metal cations and ligands, would mitigate the undesired side reaction in accelerated ACR processes. Based on this hypothesis, a simple ACR substrate was designed to screen bases.

2. Results

To prove the efficiency of the cation-dependent ACR, large amounts of substrate were pursued in a short time. In addition, cyclic ACR substrate was favored over acyclic because the ACR of cyclic substrates proceeds with fewer entropic/geometric issues [12]. Commercially available methyl pipecolinate 1 was subjected to the sequential Schotten–Baumann amidation [14] to create amide 2, which was converted to aldehyde 3 via diisobuylaluminum hydride (DIBAL) reduction. Finally, Wittig methylenation afforded allyl amide 4 an excellent yield, as depicted in Scheme 1.
Various conditions were screened to effectively convert allyl amide 4 to the ring-expanded lactam 5, as shown in Table 1. As expected, bulky Grignard reagents, such as iPrMgCl or tBuMgBr, exhibited greater efficiency than LHMDS, the standard base for ACR [15,16] (entries 1, 2, 4). In contrast, sp2-hybridized carbanion, such as 2-mesitylMgBr, produced a lower yield than LHMDS [17] (entry 3). Relatively small Grignard reagents were also not effective, likely because of the nucleophilic substitution of Grignard reagents. Although sodium and potassium cations are larger than lithium cations, employing NaHMDS or KHMDS as a base also generated worse results than LHMDS (entries 7, 8): in these cases, rather than the ACR adduct 5, an unidentified side product was obtained soon after the base was added. By contrast, iPrMgCl improved the ACR process, but other reaction conditions, such as the solvent and temperature, needed to be further optimized. The screening of representative solvents (benzene, tetrahydrofuran (THF), n-decane) is depicted in entries 9–11. The use of benzene improved results slightly; however, polar or extremely nonpolar solvents did not. Lastly, an ACR carried out at room temperature with benzene yielded no reaction (entry 12). Replacing iPrMgCl with iPrMgBr showed similar results, as shown in entry 13.
The optimized ACR conditions were applied to various substrates, as shown in Scheme 2. The reduction of known ester 6 [18] provided primary alcohol 7, which was protected by a tert-butyldiphenylsilyl (TBDPS) group. The silyl ether 8 was treated with trifluoroacetic acid (TFA) to generate amine salt, which was transformed uneventfully into butyryl amide 9. To verify the bulkiness of allyl side chain 9, TBDPS was converted into tert-butyldimethylsilyl (TBS) or triethylsilyl (TES) through tetra-n-butylammonium fluoride (TBAF)/AcOH deprotection followed by a corresponding silyl protection. This straightforward synthesis enabled TBS or TES to substitute for ACR substrates 11 and 12 in an excellent yield. Amide substitution was also attempted. After acidic deprotection of the tert-butyloxycarbonyl (Boc) group of carbamates 8, as described above, a concomitant acylation with alkynyl or aromatic functionality was also executed, employing N-ethyl-N′-(3-dimethylaminopropyl)carbodiimide hydrochloride(EDCI)/4-dimethylaminopyridine (DMAP) amidation conditions. After two uneventful procedures, desired substrates 13 and 14 were produced.
Amide substituent derivatization was also carried out, as shown in Scheme 3. Williamson etherification of the primary alcohol 7, followed by sequential Boc deprotection/amidation, afforded differently substituted amides 1618 in a straightforward manner. These three derivatives were expected to prove the substituent effect of amide moiety.
Finally, acyclic substrate 21 was prepared from p-methoxybenzyl amines 19 through an amidation/crotylation sequence. Thus, with the various substrates in hand, iPrMgCl mediated ACR (Scheme 4).
The ACR of various substrates is summarized in Scheme 5. As expected, the employment of iPrMgCl/benzene converted each of the substrates into the requisite lactams/amides more efficiently than in conventional conditions (LHMDS/toluene). Of note, superior results occurred in some cases, such as sterically demanded substrates 13 and 14, as well as labile TES-protected substrate 12. ACR under the treatment of acyclic amide 21 with iPrMgCl also yielded impressive results. Moreover, the LHMDS base did not produce the desired free amide 21’ at all. In fact, a brief comparison of the alkene-substituted ACR substrate showed that the larger the substituent of the allylic side chain, the worse the product yield. Based on this tendency, the increased bulkiness of the side chain could cause the desired ACR process to occur. Similarly, the results from amide analogs 1618 also supported this hypothesis. Consequently, increased repulsion of the allylic side chain with amide enolate is thought to be responsible for the low yield of ACR, but this obstacle can be overcome by employing iPrMgCl as a base.
To verify the structure of macrolactams, ACR product 14’ was crystallized. Figure 3 represents the structure of 14’, which features the 1,2-anti-configured side chain and the 10-membered lactam framework. The crystal structure below shows that ACR proceeded as designed.
From a mechanistic point of view, it was hypothesized that reactive conformation would explain the pivotal role of iPrMgCl. For example, in the case of amide 17, a reactive enolate had to be generated and arranged for the desired [3,3]-sigmatropic rearrangement to occur. While desired conformer 17-A might produce a corresponding ACR product, the undesired conformer 17-B might lead to no ACR process. The portion of the undesired conformer 17-B that resulted from the substrate 17 could be lessened when the Grignard base was used instead of LHMDS, as steric repulsion of the alkenyl side chain with Cl-Mg-O complex (in 17-D) made it more unstable than the Li-O complex did (in 17-B). This repulsion might give rise to the rapid conversion of the undesired conformer 17-D to the desired conformer 17-C, which would result in the ACR process (Scheme 6).
To investigate the structural stability of the reaction intermediates and their conformations (17-A through 17-D), molecular dynamics (MD) simulations were carried out for 10 ns. To monitor the structural stability of each conformation, the C-C-C-O dihedral angles were measured during the simulations (Figure 4).
In the case of lithium enolate (Figure 5), MD results clearly showed that the desired Li-conformer 17-A is very unstable: it did not stay in one state for long (Figure 5A,B). In contrast, the conformation of 17-B was stable, maintaining the C-C-C-O dihedral angle at 60° (Figure 5A,C).
However, in the case of magnesium enolate from amide 17, the structural stability of both conformations showed similar fluctuation patterns (Figure 6A). The most common dihedral angles (i.e., conformation) of 16-C were 110° (Figure 6A,B), while those of 17-D were –110° (Figure 6A,C). The instability of undesired conformer 17-D would explain the rapid conversion of desired conformer 17-C in the corresponding ACR product.

3. Materials and Methods

3.1. General Information

Unless noted otherwise, all starting materials and reagents were obtained from commercial suppliers and were used without further purification. Tetrahydrofuran was distilled from sodium benzophenone ketyl. Dichloromethane was freshly distilled from calcium hydride. All solvents used for routine isolation of products and chromatography were reagent grade. Air- and moisture-sensitive reactions were performed under argon atmosphere. Flash column chromatography was performed using silica gel 60 (230–400 mesh, Merck, Darmstadt, Germany) with the indicated solvents. Thin-layer chromatography was performed using 0.25 mm silica gel plates (Merck). 1H-NMR data were reported in the order of chemical shift, multiplicity (s, singlet; d, doublet; t, triplet; q, quartet; m, multiplet and/or multiple resonance), number of protons, and coupling constant in hertz (Hz).

3.1.1. Methyl 1-butyrylpiperidine-2-carboxylate (2)

To a solution of methyl pipecolinate hydrochloride 1 (3.9 g, 22 mmol) in THF (40 mL), a solution of Na2CO3 (11 g, 110 mmol) in H2O was added at 0 °C. After addition of n-butyryl chloride (2.7 mL, 26 mmol) at 0 °C, the reaction mixture was stirred for 24 h. After filtration of insoluble solids, reaction mixture was extracted EtOAc twice. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:1) to afford methyl ester 2 (4.1 g, 89%) as a colorless oil. IR (KBr) νmax 2953, 2869, 1741, 1648, 1426, 1322 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 5.25 (d, 1H, J = 5.2 Hz), 4.47–4.40, 3.65–3.61 (m, 1H), 3.57 (s, 3H), 3.09 (dt, 1H, J = 2.8, 12.8 Hz), 2.48–2.47, 2.18–2.03 (m, 2H), 2.24 (t, 2H, J = 7.6 Hz), 1.59–1.43 (m, 4H), 1.36–1.13 (m, 2H), 0.83 (t, 3H, J = 7.6 Hz); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 172.7, 172.3, 171.6, 171.1, 55.7, 52.0, 51.7, 51.4, 43.1, 38.9, 35.0, 34.7, 27.0, 26.3, 25.0, 24.3, 20.7, 20.6, 18.2, 13.5; LRMS (FAB) m/z 214 (M + H+); HRMS (FAB) calcd for C11H20NO3 (M + H+): 214.1443, found 214.1448.

3.1.2. 1-Butyrylpiperidine-2-carbaldehyde (3)

To a solution of methyl ester 2 (850 mg, 4.0 mmol) in CH2Cl2 (10 mL), DIBAL (1.0 M in toluene, 8.0 mL, 8.0 mmol) was added at –78 °C and stirred for 3 h. Then, 15% sodium potassium tartrate solution (10 mL) was added to reaction mixture and stirred for 12 h at room temperature. Reaction mixture was extracted CH2Cl2 twice. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:1) to afford aldehyde 3 (300 mg, 41%) as a colorless oil. IR (KBr) νmax 2939, 2869, 1731, 1643, 1425 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 9.62 (s), 9.45 (s, 1H), 5.33 (d, J = 5.2 Hz), 5.07–5.05 (m, 1H), 4.62–4.58 (m), 4.35–4.33 (m), 3.72–3.64 (m, 2H), 3.08 (dt, 1H, J = 2.8, 11.6 Hz), 2.35–2.13 (m, 4H), 1.68–1.53 (m, 5H), 1.43–1.18 (m, 2H), 0.89 (t, 3H, J = 7.2 Hz); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 201.0, 200.2, 173.1, 62.3, 58.9, 51.9, 51.6, 44.1, 43.3, 35.2, 35.0, 26.5, 25.3, 24.5, 23.2, 20.9, 20.8, 18.5, 13.7; LRMS (FAB) m/z 184 (M + H+); HRMS (FAB) calcd for C10H18NO2 (M + H+): 184.1338, found 184.1340.

3.1.3. 1-(2-Vinylpiperidin-1-yl)butan-1-one (4)

To a suspension of methyl triphenylphosphonium bromide (850 mg, 2.4 mmol) in THF (5 mL), KOtBu (1.0 M in THF, 2.2 mL, 2.2 mmol) was added at 0 °C and stirred for 30 min. After addition of aldehyde 2 (290 mg, 1.6 mmol) in THF (2 mL), reaction mixture was stirred for 10 min and quenched with addition of H2O. Reaction mixture was extracted EtOAc twice. Organic layers were dried over MgSO4, filtered, evaporated and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:2 to 1:1) to afford allyl amide 4 (220 mg, 77%) as a colorless oil. IR (KBr) νmax 2937, 2867, 1645, 1425, 1244 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 5.71–5.68 (m, 1H), 5.17 (m, 1H), 5.34 (bs), 3.61–3.58 (m, 1H), 5.02–4.98 (m, 1H), 4.48 (bs, 1H), 3.08 (t, J = 11.6 Hz), 2.60 (t, 1H, J = 11.6 Hz), 2.32–2.20 (m, 2H), 1.79–1.76 (m, 1H), 1.66–1.40 (m, 6H), 1.34 (m, 1H), 0.93–0.89 (m, 3H); 13C-NMR (CDCl3, 100 MHz) δ 172.4, 171.7, 153.5, 136.5, 116.2, 115.8, 54.4, 51.6, 49.5, 43.3, 41.7, 37.2, 35.5, 35.3, 35.0, 30.0, 28.3, 26.3, 25.2, 19.5, 18.8, 13.9; LRMS (FAB) m/z 182 (M + H+); HRMS (FAB) calcd for C11H20NO (M + H+): 182.1545, found 182.1543.

3.1.4. (E)-3-ethyl-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (5)

Procedure A; To a solution of allyl amide 4 (29 mg, 0.15 mmol) in toluene (1 mL), iPrMgCl (2.0 M in THF, 0.15 mL, 0.30 mmol) was added at reflux condition. After stirring at same temperature for 30 min, reaction mixture was cooled down to room temperature and quenched with brine and extracted with EtOAc. Organic layers were dried over MgSO4, filtered, evaporated and purified by column chromatography on silica gel (EtOAc:n-hexane = 2:1) to afford lactam 5 (22 mg, 78%) as an amorphous solid.
Procedure B; To a solution of allyl amide 4 (29 mg, 0.15 mmol) in toluene (2 mL), LHMDS (1.0 M in n-hexane, 0.30 mL, 0.30 mmol) was added at reflux condition. After stirring at same temperature for 12 h, reaction mixture was cooled down to room temperature and quenched with brine and extracted with EtOAc. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 2:1) to afford lactam 5 (18 mg, 62%) as an amorphous solid. IR (KBr) νmax 3315, 2925, 2441, 1637, 1550, 1451 cm−1; 1H-NMR (CD3OD, 300 MHz) δ 7.37 (bs, 1H), 5.38–5.16 (m, 2H), 3.49–3.41 (m, 1H), 2.69–2.62 (m, 1H), 2.17–2.10 (m, 1H), 2.07 -1.97 (m, 2H), 1.82–1.74 (m, 3H), 1.67–1.52 (m, 2H), 1.40–1.37 (m, 1H), 1.30–1.19 (m, 2H), 0.77 (t, 3H, J = 3.9 Hz); 13C-NMR (CDCl3, 75 MHz) δ 174.8, 134.5, 127.7, 52.7, 40.2, 37.3, 32.8, 29.7, 29.0, 24.1, 12.4; LRMS (FAB) m/z 182 (M + H+); HRMS (FAB) calcd for C11H20NO (M + H+): 182.1545, found 182.1543.

3.1.5. (E)-tert-butyl 2-(3-hydroxyprop-1-enyl)piperidine-1-carboxylate (7)

To a solution of unsaturated ester 6 (2.9 g, 10 mmol) in THF (20 mL), DIBAL (1.0 M in toluene, 22 mL, 22 mmol) was added at 0 °C and stirred for 30 min. 15% sodium potassium tartrate solution was added to reaction mixture and stirred for 5 h at room temperature. Reaction mixture was extracted EtOAc twice. Organic layers were dried over MgSO4, filtered, evaporated and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:1) to afford primary alcohol 7 (2.0 g, 81%) as a colorless oil. IR (KBr) νmax 3443, 2936, 2862, 1690, 1515, 1415, 1367 cm−1; 1H-NMR (CDCl3, 500 MHz, mixture of rotamers) δ 5.64–5.56 (m, 2H), 4.74 (b, 1H) 5.58–5.54 (m, 1H), 4.10–4.09 (m, 2H), 3.88 (d, 2H, J = 13.5 Hz), 2.77 (t, 1H, J = 12.5 Hz), 2.21 (b, 1H), 1.72–1.58 (m, 2H), 1.54–1. 52 (m, 2H), 1.40 (s, 9H); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 171.0, 155.2, 130.4, 129.6, 128.6, 79.3, 62.8, 60.2, 51.4, 50.3, 39.6, 29.0, 28.3, 25.3, 20.8, 19.3, 18.9, 14.0; LRMS (FAB) m/z 242 (M + H+); HRMS (FAB) calcd for C13H24NO3 (M + H+): 242.1756, found 242.1752.

3.1.6. (E)-tert-butyl 2-(3-(tert-butyldiphenylsilyloxy)prop-1-enyl)piperidine-1-carboxylate (8)

To a solution of alcohol 7 (920 mg, 3.8 mmol) in dimethylformamide (DMF, 8 mL), imidazole (390 mg, 5.7 mmol), and TBDPSCl (0.99 mL, 3.8 mmol) were added at 0 °C and stirred for 12 h. After addition of H2O, reaction mixture was diluted with EtOAc and washed with H2O three times. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane=1:10 to 1:5) to afford TBDPS ether 8 (1.4 g, 77%) as a colorless oil. IR (KBr) νmax 3431, 2934, 2857, 1692, 1469, 1424 cm−1; 1H-NMR (CDCl3, 300 MHz, mixture of rotamers) δ 7.67–7.65 (m, 4H), 7.42–7.32 (m, 6H), 5.66 (dd, 1H, J = 4.8, 15.6 Hz), 5.58–5.54 (m, 1H), 4.76 (s, 1H), 4.20 (dd, 2H, J = 1.5, 4.4 Hz), 3.90 (d, 1H, J = 12Hz), 2.76 (t, 1H, J = 12.7 Hz), 1.67–1.40 (m, 6H), 1.42 (s, 9H), 1.03 (s, 9H); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 170.9, 15.2, 135.4, 133.6, 130.0, 129.5, 128.6, 127.5, 79.0, 64.0, 60.2, 29.3, 28.3, 26.7, 25.4, 20.8, 19.4, 19.1, 14.0; LRMS (FAB) m/z 480 (M + H+).

3.1.7. (E)-1-(2-(3-(tert-butyldiphenylsilyloxy)prop-1-enyl)piperidin-1-yl)butan-1-one (9)

To a solution of TBDPS ether 8 (62 mg, 0.13 mmol) in CH2Cl2 (2 mL), trifluoroacetic acid (2 mL) was added and stirred for 30 min. After evaporation of reaction mixture, the residue was dissolved in CH2Cl2 (2 mL) and treated with iPr2NEt (0.1 mL) and n-butyryl chloride (0.05 mL) at 0 °C and stirred for 12 h. Reaction mixture was quenched with H2O and extracted with CH2Cl2 twice. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:3 to 1:2) to afford butyryl amide 9 (55 mg, 95%) as a colorless oil. IR (KBr) νmax 2935, 2858, 1732, 1644, 1427, 1238 cm−1; 1H-NMR (CDCl3, 500 MHz, mixture of rotamers) δ 7.68–7.62 (m, 4H), 7.43–7.36 (m, 6H), 5.68 (b, 1H), 5.55 (d, 1H, J = 15.5 Hz), 4.52 (b, 1H), 4.23 (s, 1H), 3.70–3.59 (m, 1H), 3.07, 2.60 (m, 1H), 2.31 (t, 2H, J = 7.5 Hz), 2.33–2.24 (m, 1H), 1.75 (m, 1H), 1.69–1.35 (m, 7H), 1.06 (s, 9H), 0.96 (t, 3H, J = 7.5 Hz); 13C-NMR (CDCl3, 125MHz) δ 177.3, 135.5, 135.4, 133.5, 130.7, 129.6, 128.2, 127.6, 64.0, 63.7, 53.7, 48.7, 37.2, 35.8, 35.6, 35.1, 30.4, 28.9, 26.7, 26.4, 25.3, 19.5, 19.1, 18.9, 18.2, 13.9, 13.6; LRMS (FAB) m/z 450 (M + H+); HRMS (FAB) calcd for C28H40NO7Si (M + H+): 450.2828, found 450.2832.

3.1.8. (E)-1-(2-(3-hydroxyprop-1-enyl)piperidin-1-yl)butan-1-one (10)

To a solution of n-butyrl amide 9 (370 mg, 0.82 mmol) in THF (10 mL), acetic acid (0.1 mL, 1.6 mmol) and TBAF (1.0 M in THF, 1.2 mL, 1.2 mmol) were added and stirred for 30 min. After addition of aq. NaHCO3, reaction mixture was extracted with EtOAc three times. Organic layers were dried over MgSO4, filtered, evaporated and purified by column chromatography on silica gel (EtOAc:MeOH = 20:1) to afford primary alcohol 10 (160 mg, 92%) as a colorless oil. IR (KBr) νmax 3398, 2936, 2865, 1620, 1436, 1253 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 5.66–5.58 (m, 2H), 5.31, 4.49 (bs, 1H), 4.43, 3.39 (d, 1H, J = 12.8 Hz), 3.09, 2.60 (t, 1H, J = 12.4 Hz), 2.26 (t, 2H, J = 7.2 Hz), 2.26–2.19 (m, 1H), 1.74 (m, 1H), 1.64–1.54 (m, 7H), 1.34 (m, 1H), 0.90 (t, 3H, J = 6.0 Hz); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 175.6, 172.4, 171.9, 131.2, 130.9, 129.3, 128.8, 62.9, 62.5, 53.6, 48.8, 41.8, 37.2, 35.5, 35.1, 30.2, 28.7, 26.1, 25.2, 19.4, 18.8, 13.9; LRMS (FAB) m/z 212 (M + H+); HRMS (FAB) calcd for C12H22NO2 (M + H+): 212.1651, found 212.1644.

3.1.9. (E)-1-(2-(3-(tert-butyldimethylsilyloxy)prop-1-enyl)piperidin-1-yl)butan-1-one (11)

To a solution of alcohol 10 (72 mg, 0.34 mmol) in CH2Cl2 (2 mL), iPr2NEt (0.2 mL) and TBSOTf (0.05 mL) were added at 0 °C and stirred for 12 h. After addition of H2O, reaction mixture was extracted with CH2Cl2. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:3 to 1:2) to afford TBS ether 11 (110 mg, 99%) as a colorless oil. IR (KBr) νmax 2934, 2857, 1645, 1539, 1424 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 5.59–5.49 (m, 2H), 5.35 (bs), 3.59–3.57 (m, 1H), 4.49–4.45 (m, 1H), 4.13 (s, 2H), 3.09, 259 (bs, 1H), 2.26 (t, 1H, J = 5.6 Hz), 2.20 (bs, 1H), 1.73 (m, 1H), 1.64–1.50 (m, 6H), 1.34 (b, 1H), 0.90 (t, 3H, J = 4.6 Hz), 0.85 (s, 9H), 0.00 (s, 6H); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 172.2, 171.5, 131.1, 128.0, 127.8, 63.3, 62.9, 53.6, 48.6, 41.7, 37.2, 35.5, 35.1, 30.3, 28.8, 26.3, 25.8, 25.3, 19.5, 18.8, 18.2, 13.9; LRMS (FAB) m/z 326 (M + H+); HRMS (FAB) calcd for C18H36NO2Si (M + H+): 326.2515, found 326.2520.

3.1.10. (E)-1-(2-(3-(triethylsilyloxy)prop-1-enyl)piperidin-1-yl)butan-1-one (12)

To a solution of alcohol 10 (100 mg, 0.47 mmol) in CH2Cl2 (2 mL), iPr2NEt (0.17 mL, 0.95 mmol) and TESCl (1.0 M in THF, 0.62 mL, 0.62 mmol were added at 0 °C and stirred for 2 h. After addition of H2O, reaction mixture was extracted with CH2Cl2. Organic layers were dried over MgSO4, filtered, evaporated and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:3 to 1:2) to afford TES ether 12 (120 mg, 78%) as a colorless oil. IR (KBr) νmax 2955, 1645, 1537, 1458, 1118 cm−1; 1H-NMR (CDCl3, 300 MHz, mixture of rotamers) δ 5.57–5.36 (m, 2H), 4.50 (b, 1H), 4.13 (s, 2H), 3.57–3.47 (m), 3.41–3.37 (m, 1H), 3.10 (t, J = 12.0 Hz), 2.60 (t, 1H, J = 12.0 Hz), 2.27 (t, 2H, J = 7.5 Hz), 1.74–1.35 (m, 7H), 0.92 (t, 9H, J = 8.1 Hz), 0.57 (q, 6H, J = 8.1 Hz); LRMS (FAB) m/z 326 (M + H+); HRMS (FAB) calcd for C18H36NO2Si (M + H+): 326.2515, found 326.2519.

3.1.11. (E)-1-(2-(3-(tert-butyldiphenylsilyloxy)prop-1-enyl)piperidin-1-yl)hex-5-yn-1-one (13)

To a solution of TBDPS ether 8 (72 mg, 0.15 mmol) in CH2Cl2 (1 mL), trifluoroacetic acid (1 mL) was added and stirred for 30 min. After evaporation of reaction mixture, the residue was dissolved in CH2Cl2 (2 mL) and treated with EDCI (57 mg, 0.3 mmol), DMAP (37 mg, 0.3 mmol) and 5-hexynoic acid (33 μL, 0.3 mmol) at 0 °C and stirred for 12 h. Reaction mixture was quenched with H2O and extracted with CH2Cl2 twice. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:3 to 1:2) to afford 5-hexynyl amide 13 (62 mg, 87%) as a colorless oil. IR (KBr) νmax 3300, 2935, 2857, 1642, 1428, 1256 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 7.66–7.60 (m, 4H), 7.42–7.24 (m, 6H), 5.71–5.63 (m, 1H), 5.57–5.50 (m, 1H), 4.53–4.45 (m, 1H), 4.11 (d, 2H, J = 7.2 Hz), 3.69–3.60 (m, 1H), 3.08–3.02 (m, 1H), 2.47–2.44 (m, 2H), 2.32 (b, 2H), 1.94–1.51 (m, 9H), 1.12 (s, 9H); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 135.6, 135.4, 133.5, 130.8, 129.6, 127.6, 83.8, 68.8, 63.8, 31.9, 31.4, 30.4, 28.9, 26.7, 26.3, 23.9, 19.5, 19.2 18.0; LRMS (FAB) m/z 474 (M + H+); HRMS (FAB) calcd for C30H40NO7Si(M + H+): 474.2828, found 474.2816.

3.1.12. (E)-1-(2-(3-(tert-butyldiphenylsilyloxy)prop-1-enyl)piperidin-1-yl)hex-5-yn-1-one (14)

To a solution of TBDPS ether 8 (1.0 g, 2.1 mmol) in CH2Cl2 (10 mL), trifluoroacetic acid (5 mL) was added and stirred for 1 h. After addition of aq. Na2CO3, reaction mixture was extracted with CH2Cl2. Organic layers were dried over MgSO4, filtered, evaporated, and dissolved in CH2Cl2 (20 mL). To this solution, 3-phenylpropionic acid (0.5 g, 3.6 mmol), EDCI (0.7 g, 3.6 mmol) and DMAP (0.9 g, 7.2 mmol) were added and stirred for 12 h. Reaction mixture was quenched with aq. NH4Cl and extracted with CH2Cl2. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:5) to afford amide 14 (0.9 g, 83% for 2 steps) as a pale yellow oil. 1H-NMR (CDCl3, 300 MHz, mixture of rotamers) δ 7.77–7.63 (m, 4H), 7.49–7.35(m, 6H), 7.33–7.18 (m, 5H), 5.74–5.43 (m, 2H), 4.50 (s, 1H), 4.25 (s, 2H), 3.46 (m, 1H), 3.00 (t, 2H, J = 7.8, 15.9 Hz), 2.67 (t, 2H, J = 7.5, 15.6 Hz), 1.48 (m, 6H), 1.07 (m, 10H); 13C-NMR (CDCl3, 125 MHz, mixture of rotamers) δ 71.6, 170.9, 141.3, 135.5, 134.7, 134.6, 133.6, 130.9, 129.7(2), 129.6, 128.5, 128.4, 128.0, 127.8, 127.6, 127.4(2) 126.1, 77.3, 77.2, 77.0, 76.8, 64.1, 63.7, 53.9, 49.1, 41.8, 37.6, 34.9, 31.7, 30.3, 26.8, 26.2, 25.9, 25.8, 25.2, 19.5, 19.2, 18.6, 18.5. LRMS (EI) m/z 512 (M + H+); HRMS (EI) calcd for C33H41O2NSi (M+): 511.2907, found 511.2903.

3.1.13. (E)-tert-butyl 2-(3-(benzyloxy)prop-1-enyl)piperidine-1-carboxylate (15)

To a solution of alcohol 7 (690 mg, 3.2 mmol) in THF (15 mL), TBAI (120 mg, 0.32 mmol), NaH (60% mineral oil, 150 mg, 3.7 mmol) and benzyl bromide (0.42 mL, 3.5 mmol) were added at 0 °C and stirred for 12 h at room temperature. After addition of H2O, reaction mixture was extracted with EtOAc twice. Organic layers were dried over MgSO4, filtered, evaporated and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:10 to 1:5) to afford benzyl ether 15 (920 mg, 86%) as a colorless oil. IR (KBr) νmax 2935, 2857, 1691, 1453, 1409, 1365 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 7.31–7.22 (m, 5H), 5.68–5.55 (m, 2H), 4.80 (s, 1H), 4.48 (d, 2H, J = 4.8 Hz), 4.01–4.00 (m, 2H), 3.92 (d,1H, J = 13.2 Hz), 2.80 (t, 1H, J = 11.6 Hz), 1.72–1.62 (m, 2H), 1.60–1.50 (m, 2H), 1.47–1.31 (m, 2H), 1.43 (s, 9H); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 155.0, 138.1, 131.8, 128.2, 127.5, 127.4, 79.1, 72.3, 71.7, 70.2, 66.1, 39.6, 28.9, 28.3, 25.3, 19.4; LRMS (FAB) m/z 332 (M + H+); HRMS (FAB) calcd for C20H30NO3 (M + H+): 332.2226, found 332.2226.

3.1.14. (E)-1-(2-(3-(benzyloxy)prop-1-enyl)piperidin-1-yl)propan-1-one (16)

Benzyl ether 15 (120 mg, 0.36 mmol) was converted to propyl amide 16 (75 mg, 72%) using same procedure as described in Section 3.1.7. IR (KBr) νmax 2936, 2857, 1644, 1538, 1426, 1251 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 7.33–7.11 (m, 5H), 5.70–5.55 (m, 2H), 5.39 (bs), 3.60 (d, 1H, J = 11.8 Hz), 4.48 (s, 2H), 4.48 (bs, 1H), 3.97 (d, 2H, J = 5.8 Hz), 3.09 (t, J = 12.3 Hz), 2.62 (t, 1H, J = 12.3 Hz), 2.34–2.27 (m, 2H), 1.79–1.76 (m, 1H), 1.63–1.52 (m, 4H), 1.27 (m, 1H), 1.09 (t, 3H, J = 6.0 Hz); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 173.0, 172.4, 138.1, 131.4, 130.9, 128.3, 128.0, 127.6, 126.9, 72.2, 72.0, 70.3, 69.9, 53.5, 48.8, 41.6, 37.3, 30.1, 28.5, 26.7, 26.2, 25.2, 19.6, 9.4, 9.0; LRMS (FAB) m/z 288 (M + H+); HRMS (FAB) calcd for C18H26NO2 (M + H+): 288.1964, found 288.1956.

3.1.15. (E)-1-(2-(3-(benzyloxy)prop-1-enyl)piperidin-1-yl)butan-1-one (17)

Benzyl ether 15 (140 mg, 0.42 mmol) was converted to butyl amide 17 (97 mg, 77%) using same procedure as described in Section 3.1.7. IR (KBr) νmax 2935, 2858, 1641, 1425, 1362 cm−1; 1H-NMR (CDCl3, 400 MHz, mixture of rotamers) δ 7.33–7.23 (m, 5H), 5.70–5.60 (m, 2H), 5.39 (bs), 3.60 (d, 1H, J = 9.0 Hz), 4.48 (m, 3H), 4.01 (d, 2H, J = 3.2 Hz), 3.09 (t, J = 12.3 Hz), 2.58 (t, 1H, J = 12.3 Hz), 2.31–2.21 (m, 2H), 1.79–1.76 (m, 1H), 1.67–1.58 (m, 6H), 1.36 (m, 1H), 0.93 (t, 3H, J = 7.2 Hz); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 176.6, 172.3, 171.8, 138.1, 137.9, 131.4, 130.9, 128.3, 127.7, 127.6, 72.2, 71.9, 70.3, 69.9, 53.6, 48.7, 41.8, 37.2, 35.8, 35.5, 35.1, 30.2, 28.6, 26.2, 25.2, 19.6, 19.4, 18.8, 18.6, 18.2, 13.9, 13.5; LRMS (FAB) m/z 302 (M + H+); HRMS (FAB) calcd for C19H28NO2 (M + H+): 302.2120, found 302.2120.

3.1.16. (E)-1-(2-(3-(benzyloxy)prop-1-enyl)piperidin-1-yl)pentan-1-one (18)

Benzyl ether 15 (190 mg, 0.57 mmol) was converted to pentyl amide 18 (99 mg, 55%) using same procedure as described in Section 3.1.7. IR (KBr) νmax 2933, 2858, 1642, 1424, 1263 cm−1; 1H-NMR (CD3OD, 400 MHz, mixture of rotamers) δ 7.32–7.23 (m, 5H), 5.80–5.56 (m, 2H), 5.29 (bs), 4.67 (bs, 1H), 4.49 (s, 2H), 4.40 (d, J = 12.3 Hz), 3.73 (d, 1H, J = 12.4 Hz), 4.01 (d, 2H, J = 3.2 Hz), 3.15 (t, J = 12.9 Hz), 2.58 (t, 1H, J = 12.5 Hz), 2.45–2.25 (m, 2H), 1.82 (b, 1H), 1.68–1.53 (m, 6H), 1.39–1.20 (m, 3H), 0.93–0.86 (m, 3H); 13C-NMR (CDCl3, 100 MHz, mixture of rotamers) δ 176.4, 172.4, 1719, 138.1, 131.4, 131.0, 128.3, 128.0, 127.5, 72.0, 70.3, 69.9, 53.7, 48.7, 41.8, 37.3, 33.6, 33.3, 32.9, 30.2, 28.6, 27.5, 26.8, 26.3, 25.2, 22.5, 22.1, 19.6, 14.0, 13.6; LRMS (FAB) m/z 316 (M + H+); HRMS (FAB) calcd for C20H30NO2 (M + H+): 316.2277, found 316.2278.

3.1.17. N-(4-methoxybenzyl)butyramide (20)

To a solution of 4-methoxybenzylamine 19 (300 mg, 2.2 mmol) in CH2Cl2 (10 mL), Et3N (0.4 mL, 2.8 mmol) and n-butyryl chloride (0.25 mL, 2.4 mmol) were at 0 °C and stirred for 5 h at room temperature. Reaction mixture was quenched with H2O and extracted with CH2Cl2 twice. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:1) to afford para-nethoxyl benzyl (PMB) amide 20 (320 mg, 71%) as a white amorphous solid. IR (KBr) νmax 3290, 2959, 1632, 1554, 1513 cm−1; 1H-NMR (CDCl3, 400 MHz) δ 7.17 (d, 2H, J = 8.6 Hz), 6.83 (d, 2H, J = 8.6 Hz), 4.85 (s, 1H), 4.26 (s, 2H), 3.72 (s, 3H), 2.17 (t, 2H, J = 7.2 Hz), 1.67–1.58 (m, 2H), 0.92 (t, 3H, J = 7.3Hz); 13C-NMR (CDCl3, 100 MHz) δ 176.4, 161.0, 132.8, 130.6, 115.6, 56.4, 44.4, 39.7, 21.1, 14.8; LRMS (FAB) m/z 208 (M + H+); HRMS (FAB) calcd for C12H18NO2 (M + H+): 208.1338, found 208.1334.

3.1.18. N-(but-2-enyl)-N-(4-methoxybenzyl)butyramide (21)

To a solution of PMB amide 20 (115 mg, 0.55 mmol) in DMF (3 mL), NaH (60% mineral oil, 26 mg, 0.66 mmol) and trans-crotyl bromide (0.10 mL, 0.83 mmol) were added at 0 °C and stirred for 2 h at room temperature. After dilution with EtOAc and reaction mixture was washed with H2O 3 times. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:3) to afford crotyl amide 21 (128 mg, 87%) as a colorless oil. IR (KBr) νmax 2962, 1645, 1513, 1459, 1248 cm−1; 1H-NMR (CDCl3, 400 MHz, mixtures of rotamers) δ 7.14–7.12 (m, 2H), 6.85–6.78 (m, 2H), 5.60–5.45 (m, 1H), 5.44–5.27 (m, 1H), 4.46 (s), 4.39 (s, 2H), 3.99 (d, J = 6.8 Hz), 3.79 (d, 1H, J = 6.8 Hz), 3.87 (d, J = 6.0 Hz), 3.68 (d, 1H, J = 6.0 Hz), 3. 76 (s), 3.74 (s, 3H), 2.32–2.27 (m, 2H), 1.71–1.50 (m, 5H), 0.96–0.84 (m, 3H); 13C-NMR (CDCl3, 100 MHz, mixtures of rotamers) δ 172.9, 172.8, 158.8, 158.7, 130.0, 129.8, 129.4, 128.8, 128.7, 128.1, 127.7, 127.5, 127.4, 127.3, 125.9, 125.8, 125.5, 114.1, 113.7, 55.1, 49.4, 49.1, 48.1, 47.3, 47.0, 46.7, 43.4, 41.2, 35.1, 34.9, 18.7, 17.6, 17.5, 13.9, 12.8; LRMS (FAB) m/z 262 (M + H+); HRMS (FAB) calcd for C16H24NO2 (M + H+): 262.1807, found 262.1800.

3.1.19. (Rac-3S,4R,E)-4-((tert-butyldiphenylsilyloxy)methyl)-3-ethyl-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (9’)

TBDPS ether 9 (27 mg, 0.060 mmol) was converted to macrolactam 9’ as an amorphous solid using Procedure A (13 mg, 48%) or Procedure B (2 mg, 7.5%). IR (KBr) νmax 3300, 2929, 1645, 1541, 1458 cm−1; 1H-NMR (CDCl3, 300 MHz) δ 7.58–7.56 (m, 4H), 7.36–7.29 (m, 6H), 5.49–5.36 (m, 2H), 4.89 (d, 1H, J = 9.0 Hz), 3.71–3.56 (m, 3H), 2.77 (dd, 1H, J = 6.9, 12.9 Hz), 2.13 (m, 2H), 1.97 (dt, 2H, J = 7.2, 11.6 Hz), 1.89–1.13 (m, 7H), 1.00 (s, 3H), 0.76 (t, 3H, J = 7.2 Hz); 13C-NMR (CDCl3, 75MHz) δ 174.8, 135.6, 133.6, 133.2, 130.4, 129.7, 127.6, 63.7, 53.5, 49.0, 40.3, 33.1, 29.8, 26.9, 26.8, 21.4, 19.4, 12.8; LRMS (FAB) m/z 450 (M + H+); HRMS (FAB) calcd for C28H40NO7Si (M + H+): 450.2828, found 450.2832.

3.1.20. (Rac-3S,4R,E)-4-((tert-buyldimethylsilyloxy)methyl)-3-ethyl-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (11’)

TBS ether 11 (48 mg, 0.15 mmol) was converted to macrolactam 11’ as an amorphous solid using Procedure A (33 mg, 69%) or Procedure B (12 mg, 25%). IR (KBr) νmax 3294, 2928, 2857, 1644, 1550 cm−1; 1H-NMR (CDCl3, 400 MHz) δ 5.43–5.36 (m, 2H), 4.97 (d, 1H, J = 5.2 Hz), 3.71–3.62 (m, 3H), 2.80 (dd, 1H, J = 6.0, 10.8 Hz), 2.21–2.13 (m, 2H), 1.97 (dt, 1H, J = 3.1, 6.5 Hz), 1.92–1.86 (m, 1H), 1.81–1.76 (m, 1H), 1.71–1.62 (m, 2H), 1.49–1.42 (m, 2H), 1.24–1.17 (m, 1H), 0.87 (s, 9H), 0.84 (t, 3H, J = 5.8 Hz), 0.01 (s, 3H), 0.01 (s, 3H); 13C-NMR (CD3OD, 100 MHz) δ 178.4, 134.3, 133.3, 65.4, 54.8, 51.6, 42.0, 34.4, 31.4, 27.2, 23.1, 20.0, 13.9, −4.3, −4.5; LRMS (FAB) m/z 326 (M + H+); HRMS (FAB) calcd for C18H36NO2Si (M + H+): 326.2515, found 326.2514.

3.1.21. (Rac-3S,4R,E)-4-((triethylsilyloxy)methyl)-3-ethyl-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (12’)

TES ether 12 (40 mg, 0.12 mmol) was converted to macrolactam 12’ as an amorphous solid using Procedure A (31 mg, 69%). IR (KBr) νmax 3299, 2926, 1646, 1553, 1453, 137 cm−1; 1H-NMR (CDCl3, 400 MHz) δ 5.45–5.35 (m, 2H), 5.00 (d, 1H, J = 8.3 Hz), 3.71–3.60 (m, 3H), 2.80 (dd, 1H, J = 7.6, 13.7 Hz), 2.21–2.00 (m, 2H), 1.96 (dt, 1H, J = 4.0, 10.2 Hz), 1.92–1.87 (m, 1H), 1.81–1.67 (m, 3H), 1.50–1.42 (m, 2H), 1.25–1.16 (m, 1H), 0.92 (t, 9H, J = 8.0 Hz), 0.84 (t, 3H, J = 7.2 Hz), 0.56 (q, 6H, J = 8.0 Hz); 13C-NMR (CDCl3, 100 MHz) δ 174.9, 133.0, 130.5, 77.2, 62.5, 53.1, 49.0, 40.3, 33.1, 29.7, 21.4, 12.8, 6.7, 4.3; LRMS (FAB) m/z 326 (M + H+); HRMS (FAB) calcd for C18H36NO2Si (M + H+): 326.2515, found 326.2519.

3.1.22. (Rac-3S,4R,E)- 3-(but-3-ynyl)-4-((tert-butyldiphenylsilyloxy)methyl)-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (13’)

Hexynyl amide 13 (22 mg, 46 μmol) was converted to macrolactam 13’ as an amorphous solid using Procedure A (12 mg, 55%). IR (KBr) νmax 3303, 2928, 2857, 1645, 1541, 1430 cm−1; 1H-NMR (CDCl3, 300 MHz,) δ 7.67–7.63 (m, 4H), 7.44–7.33 (m, 6H), 5.51 (dd, 1H, J = 8.7, 15.6 Hz), 5.46–5.36 (m, 1H), 5.01 (d, 1H, J = 9.6 Hz), 3.71 (d, 2H, J =2.7 Hz), 3.67 (m, 1H), 2.81 (dd, 1H, J = 7.5, 13.2 Hz), 2.44 (dd, 1H, J = 3.0, 10,8 Hz), 2.29–2.15 (m, 3H), 2.10–1.47 (m, 8H), 1.23 (m, 1H), 1.05 (s, 9H); 13C-NMR (CDCl3, 75 MHz) δ 174.1, 135.7, 135.6, 133.5, 133.4, 130.0, 129.7, 129.6, 127.7, 84.0, 68.6, 63.4, 50.0, 48.9, 40.3, 33.1, 27.0, 26.9, 19.3, 17.0; LRMS (FAB) m/z 474 (M + H+); HRMS (FAB) calcd for C30H40NO7 Si (M + H+): 474.2828, found 474.2832.

3.1.23. (Rac-3S,4R,E)- 3-benzyl-4-((tert-butyldiphenylsilyloxy)methyl)-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (14’)

Phenylethyl amide 14 (1.0 g, 1.9 mmol) was converted to macrolactam 14’ as an amorphous solid using Procedure A (0.94 g, 94%). 1H-NMR (CDCl3, 500 MHz) δ 7.62–7.59 (m, 4H), 7.37–7.25 (m, 6H), 7.14–7.02 (m, 5H), 5.46–5.36 (m, 2H), 4.82 (d, 1H, J = 8.0 Hz), 3.84–3.75 (m, 2H), 3.51 (ddd, 1H, J = 9.0, 12.5, 17.0 Hz), 2.93 (dd, 1H, J = 12.0, 14.0 Hz), 2.61 (dd, 2H, J = 2.5, 13.5Hz), 2.57 (dd, 1H, J = 11.5, 19Hz), 2.39 (ddd, 1H, J = 2.5, 10.5, 13Hz), 2.24 (dd, 1H, J = 8.5, 18.5, Hz), 2.14 (dd, 1H, J = 3.5, 12.5, Hz) 1.83–1.71 (m, 2H), 1.63 (d, 1H, J = 7.0 Hz), 1.40 (dd, 1H, J = 11.5, 23.0 Hz), 1.06–0.99 (m, 9H); 13C-NMR (CDCl3, 125MHz) δ173.9, 141.0, 140.7, 135.7, 133.5, 129.9, 128.9, 128.5, 127.7, 127.0, 125.9, 65.2, 63.6, 53.8, 49.0, 40.3, 34.3, 33.1, 29.8, 27.0, 19.4; LRMS (EI) m/z 512 (M + H+); HR-MS (EI) calcd for C33H41O2NSi (M+): 511.2907, found 511.2908.

3.1.24. (Rac-3S,4R,E)- 4-(benzyloxymethyl)-3-methyl-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (16’)

Propyl amide 16 (20 mg, 70 μmol) was converted to macrolactam 16’ as an amorphous solid using Procedure A (16 mg, 80%) or Procedure B (7 mg, 35%). IR (KBr) νmax 3312, 2924, 1644, 1550, 1452, 1367 cm−1; 1H-NMR (CD3OD, 300 MHz) δ 7.33–7.24 (m, 5H), 5.52–5.31 (m, 2H), 4.48 (q, 2H, J = 12.0 Hz), 3.54 (d, 2H, J = 4.5 Hz), 3.57–3.47 (m, 1H), 2.73 (dd, 1H, J = 6.9, 13.5 Hz), 2.37–2.12 (m, 3H), 1.93–1.72 (m, 3H), 1.51–1.27 (m, 2H), 1.05 (d, 3H, J = 6.3 Hz); 13C-NMR (CDCl3, 100 MHz) δ 175.6, 138.2, 133.8, 130.3, 128.3, 127.6, 127.5, 126.9, 73.2, 69.7, 48.5, 45.0, 40.1, 33.0, 29.6, 13.6; LRMS (FAB) m/z 288 (M + H+); HRMS (FAB) calcd for C18H26NO2 (M + H+): 288.1964, found 288.1956.

3.1.25. (Rac-3S,4R,E)-4-(benzyloxymethyl)-3-ethyl-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (17’)

Butyryl amide 17 (20 mg, 66 μmol) was converted to macrolactam 17’ as an amorphous solid using Procedure A (14 mg, 70%) or Procedure B (3 mg, 15%). IR (KBr) νmax 2926, 2856, 2421, 1637, 1457 cm–1; 1H-NMR (CD3OD, 300 MHz) δ 7.24–7.15 (m, 5H), 5.41–5.22 (m, 2H), 4.38 (q, 2H, J = 12.0 Hz), 3.44 (d, 2H, J = 4.0 Hz), 3.45–3.44 (m, 1H), 2.66 (m, 1H), 2.16–2.02 (m, 3H), 1.78–1.18 (m, 7H), 0.73 (t, 3H, J = 7.2 Hz); 13C-NMR (CD3OD, 75 MHz) δ 178.2, 140.5, 134.5, 133.3, 130.1, 129.7, 129.4, 74.9, 72.3, 55.0, 42.0, 33.9, 31.4, 23.1, 21.4, 14.9, 13.8.; LRMS (FAB) m/z 302 (M + H+); HRMS (FAB) calcd for C19H28NO2 (M + H+): 302.2120, found 302.2121.

3.1.26. (Rac-3S,4R,E)- 4-(benzyloxymethyl)-3-propyl-3,4,7,8,9,10-hexahydroazecin-2(1H)-one (18’)

Pentyryl amide 18 (44 mg, 0.14 mmol) was converted to macrolactam 18’ as an amorphous solid using Procedure A (29 mg, 66%). IR (KBr) νmax 3304, 2927, 2858, 1645, 1543, 1453 cm−1; 1H-NMR (CD3OD, 300 MHz) δ 7.23–7.15 (m, 5H), 5.42–5.22 (m, 2H), 4.43 (d, 1H, J = 12.0 Hz), 4.33 (d, 2H, J = 12.0 Hz), 3.47–3.43 (m, 2H), 2.63 (m, 1H), 2.30–2.04 (m, 2H), 1.78–0.99 (m, 10H), 0.77 (t, 3H, J = 6.9 Hz); 13C-NMR (CDCl3, 100 MHz) δ 174.8, 138.3, 133.4, 130.3, 128.3, 127.6 (2C), 73.1, 69.9, 67.6, 51.5, 47.2, 40.2, 33.0, 30.4, 29.7, 21.4, 14.1; LRMS (FAB) m/z 316 (M + H+); HRMS (FAB) calcd for C20H30NO2 (M + H+): 316.2277, found 316.2272.

3.1.27. 2-Ethyl-N-(4-methoxybenzyl)-3-methylpent-4-enamide (21’)

To a solution of crotyl amide 21 (44 mg, 0.18 mmol) in toluene (2 mL), iPrMgCl (2.0 M in THF, 0.18 mL, 0.36 mmol) was added at reflux condition. After stirring at same temperature for 12 h, additional iPrMgCl (2.0 M in THF, 0.18 mL, 0.36 mmol) was added at same temperature. Reaction mixture was refluxed 5 h and cooled down to room temperature and quenched with brine and extracted with EtOAc. Organic layers were dried over MgSO4, filtered, evaporated, and purified by column chromatography on silica gel (EtOAc:n-hexane = 1:3) to afford lactam 21’ (18 mg, 36%) as an amorphous solid. IR (KBr) νmax 3305, 2965, 1646, 1514, 1459 cm−1; 1H-NMR (CDCl3, 500 MHz) δ 7.18 (d, 2H, J = 7.6 Hz), 6.83 (d, 2H, J = 7.6 Hz), 5.79–5.72 (m, 1H), 5.59 (bs, 1H), 5.00–4.92 (m, 2H), 4.32 (d, 2H, J = 14 Hz), 3.77 (s, 3H), 2.40–2.34 (m, 1H), 1.83–1.77 (m, 1H), 1.71–1.48 (m, 3H), 1.11 (d, 3H, J = 5.5 Hz), 0.87 (t, 3H, J = 5.9 Hz); 13C-NMR (CDCl3, 125 MHz) δ 174.1, 158.9, 141.6, 130.5, 129.2, 114.2, 114.0, 55.3, 55.2, 42.8, 40.1, 23.0, 17.5, 12.2; LRMS (FAB) m/z 262 (M + H+); HRMS (FAB) calcd for C16H24NO2 (M + H+): 262.1807, found 262.1804.

3.2. Molecular Dynamics Simulations

In order to investigate and compare the structural stability of the reaction intermediate of the compounds, MD simulations were performed for 10 ns with GROMACS 5.1.5 using optimized potentials for liquid simulations—all-atom (OPLS-AA) [19]. The OPLS-AA force field was utilized to explain the interactions that involved lithium. Our ligand topology for the OPLS-AA force field was generated from the LigParGen server [20]. We have modified the parameter file for the oxygen–metal interaction since the original OPLS-AA force field did not provide it. The systems were solvated in the dodecahedron water box with tip3p water model, and then neutralized with the counter ions [21]. Each solvated system was energy minimized through steepest descent algorithm at 10,000 steps and maximum force lower than 1000 kJ/mol. In two equilibration steps, firstly the equilibration of each system was subjected to number of particles, volume, and temperature (NVT) equilibration at 100 ps at 300 K using Berendsen thermostat algorithm [22]. Secondly, the equilibration of each system was conducted using number of particles, pressure, and temperature (NPT) equilibration for 100 ps of 1 bar using the Parrinello–Rahman barostat [23]. The Linear Constraint Solver for Molecular Simulations (LINCS) algorithm [24] was used to restrain bond and heavy atom bonds. The settle algorithm [25] was utilized to restrict the geometry of water molecules. We calculated the long-range electrostatic interaction and a cut-off distance of 1.2 nm using the Particle Mesh Ewald (PME) algorithm [26]. MD simulations were conducted for 10 ns, saving the coordinate data for every 5 ps.

4. Conclusions

iPrMgCl is an advanced base of ACR. In addition, it is superior to the classic LHMDS/toluene condition when the sterically demanded substrate is subjected to ACR. The improvement of the aspect of reactions is derived from the relative stability of the desired conformation for ACR. MD simulations were carried out to investigate the structural stability of the reaction intermediates. The results of C-C-C-O dihedral angle analysis clearly showed that the structural stability of the intermediates was highly related to the portion of the product in the reaction. More detailed mechanistic investigations using other substrates, as well as their applications to the synthesis of bioactive molecules or natural products, will be discussed in due course.

Author Contributions

S.-M.P. conceived the hypothesis, supervised the project, and wrote the manuscript. B.R.S. and M.W.H. performed the synthesis of molecules. D.K. and C.P. performed molecular dynamics studies. K.W.L. supervised the molecular dynamics study and partly wrote the manuscript.

Funding

This research was supported by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the ministry of Education, Science, and Technology (NRF-2016R1C1B2006699).

Conflicts of Interest

The authors declare no conflict of interest.

Abbreviations

THFTetrahydrofuran
DIBALDiisobuylaluminum hydride
LHMDSLithium hexamethyldisilazane
LHMDSPotassium hexamethyldisilazane
Boctert-Butyloxycarbonyl
TBDPStert-Butyldiphenylsilyl
TFATrifluoroacetic acid
DMFDimethylformamide
TBAFTetra-n-butylammonium fluoride
TBStert-Butyldimethylsilyl
TfTrifluoromethanesulfonate
TESTriethylsilyl
EDCIN-Ethyl-N′-(3-dimethylaminopropyl)carbodiimide hydrochloride
DMAP4-Dimethylaminopyridine
BnBenzyl
TBAITetra-n-butylammonium iodide
PMBpara-Methoxyl benzyl

References

  1. Amirkia, V.; Heinrich, M. Alkaloids as Drug leads—A Predictive Structural and Biodiversity-Based Analysis. Phytochem. Lett. 2014, 10, XLVIII–LIII. [Google Scholar] [CrossRef] [Green Version]
  2. Earley, W.G.; Jacobsen, J.E.; Madin, A.; Meier, G.P.; O’Donnell, C.J.; Oh, T.; Old, D.W.; Overman, L.E.; Sharp, M.J. Aza-Cope Rearrangement—Mannich Cyclizations for the Formation of Complex Tricyclic Amines: Stereocontrolled Total Synthesis of (±)-Gelsemine. J. Am. Chem. Soc. 2005, 127, 18046–18053. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  3. Moon, H.; An, H.; Sim, J.; Kim, K.; Paek, S.; Suh, Y. Efficient Strategy for the Stereoselective Synthesis of 2, 3-Disubstituted Benzo [A] Quinolizidine Alkaloids: Concise Synthesis of (−)-Protoemetinol. Tetrahedron Lett. 2015, 56, 608–611. [Google Scholar] [CrossRef]
  4. Kretzschmar, M.; Hofmann, F.; Moock, D.; Schneider, C. Intramolecular Aza-Diels–Alder Reactions of ortho-Quinone Methide Imines: Rapid, Catalytic, and Enantioselective Assembly of Benzannulated Quinolizidines. Angew. Chem. Int. Ed. 2018, 57, 4774–4778. [Google Scholar] [CrossRef] [PubMed]
  5. Crossley, S.W.; Shenvi, R.A. A Longitudinal Study of Alkaloid Synthesis Reveals Functional Group Interconversions as Bad Actors. Chem. Rev. 2015, 115, 9465–9531. [Google Scholar] [CrossRef]
  6. Majumdar, K.C.; Bhattacharyya, T.; Chattopadhyay, B.; Sinha, B. Recent Advances in the Aza-Claisen Rearrangement. Synthesis 2009, 2117–2142. [Google Scholar] [CrossRef]
  7. Martín Castro, A.M. Claisen Rearrangement Over the Past Nine Decades. Chem. Rev. 2004, 104, 2939–3002. [Google Scholar] [CrossRef]
  8. Lee, Y.; Jung, J.; Kim, S.; Jung, J.; Paek, S.; Kim, N.; Chang, D.; Lee, J.; Suh, Y. First Total Synthesis and Structural Confirmation of Fluvirucinine A2 Via an Iterative Ring Expansion Strategy. Org. Lett. 2010, 12, 2040–2043. [Google Scholar] [CrossRef]
  9. Nubbemeyer, U. Recent advances in charge-accelerated Aza-Claisen rearrangements. In Natural Products Synthesis II; Springer: Berlin, Germany, 2005; pp. 149–213. [Google Scholar]
  10. Jung, J.; Kim, S.; Suh, Y. Advances in Aza-Claisen-Rearrangement-Induced Ring-Expansion Strategies. Asian J. Org. Chem. 2017, 6, 1117–1129. [Google Scholar] [CrossRef]
  11. Tsunoda, T.; Sasaki, O.; Itô, S. Aza-Claisen Rearrangement of Amide Enolates. Stereoselective Synthesis of 2, 3-Disubstituted Carboxamides. Tetrahedron Lett. 1990, 31, 727–730. [Google Scholar] [CrossRef]
  12. Suh, Y.; Kim, S.; Jung, J.; Shin, D.; Min, K.; Koo, B.; Kim, H. Asymmetric Total Synthesis of Fluvirucinine A1. Angew. Chem. Int. Ed. 1999, 38, 3545–3547. [Google Scholar] [CrossRef]
  13. Paek, S.; Kim, N.; Shin, D.; Jung, J.; Jung, J.; Chang, D.; Moon, H.; Suh, Y. A Concise Total Synthesis of (+)-Tetrabenazine and (+)-α-Dihydrotetrabenazine. Chem. Eur. J. 2010, 16, 4623–4628. [Google Scholar] [CrossRef] [PubMed]
  14. Sonntag, N.O. The Reactions of Aliphatic Acid Chlorides. Chem. Rev. 1953, 52, 237–416. [Google Scholar] [CrossRef]
  15. Moon, H.; Yoon, H.; Lim, C.; Jang, J.; Yi, J.; Lee, J.; Lee, J.; Na, Y.; Son, W.; Kim, S. Asymmetric Synthesis of (−)-6-Desmethyl-Fluvirucinine A1 Via Conformationally-Controlled Diastereoselective Lactam-Ring Expansions. Molecules 2018, 23, 2351. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  16. Jang, J.; Jung, J.; Ahn, J.; Sim, J.; Chang, D.; Kim, D.; Suh, Y. Asymmetric Formal Synthesis of Schulzeines A and C. Org. Biomol. Chem. 2012, 10, 5202–5204. [Google Scholar] [CrossRef]
  17. Arnold, R.T.; Searles, S. A New Rearrangement of Allylic Esters. J. Am. Chem. Soc. 1949, 71, 1150–1151. [Google Scholar] [CrossRef]
  18. Sato, T.; Yamazaki, T.; Nakanishi, Y.; Uenishi, J.; Ikeda, M. A New Entry to 9-Azabicyclo [3.3. 1] Nonanes using Radical Translocation/Cyclisation Reactions of 2-(but-3-Ynyl)-1-(O-Iodobenzoyl) Piperidines. J. Chem. Soc. Perkin Trans. 1 2002, 1438–1443. [Google Scholar] [CrossRef]
  19. Abraham, M.J.; Murtola, T.; Schulz, R.; Páll, S.; Smith, J.C.; Hess, B.; Lindahl, E. GROMACS: High Performance Molecular Simulations through Multi-Level Parallelism from Laptops to Supercomputers. SoftwareX 2015, 1, 19–25. [Google Scholar] [CrossRef] [Green Version]
  20. Dodda, L.S.; Cabeza de Vaca, I.; Tirado-Rives, J.; Jorgensen, W.L. LigParGen Web Server: An Automatic OPLS-AA Parameter Generator for Organic Ligands. Nucleic Acids Res. 2017, 45, W331–W336. [Google Scholar] [CrossRef] [Green Version]
  21. Jorgensen, W.L.; Chandrasekhar, J.; Madura, J.D.; Impey, R.W.; Klein, M.L. Comparison of Simple Potential Functions for Simulating Liquid Water. J. Chem. Phys. 1983, 79, 926–935. [Google Scholar] [CrossRef]
  22. Berendsen, H.J.; Postma, J.V.; van Gunsteren, W.F.; DiNola, A.; Haak, J.R. Molecular Dynamics with Coupling to an External Bath. J. Chem. Phys. 1984, 81, 3684–3690. [Google Scholar] [CrossRef] [Green Version]
  23. Parrinello, M.; Rahman, A. Polymorphic Transitions in Single Crystals: A New Molecular Dynamics Method. J. Appl. Phys. 1981, 52, 7182–7190. [Google Scholar] [CrossRef]
  24. Hess, B.; Bekker, H.; Berendsen, H.J.; Fraaije, J.G. LINCS: A Linear Constraint Solver for Molecular Simulations. J. Comput. Chem. 1997, 18, 1463–1472. [Google Scholar] [CrossRef]
  25. Miyamoto, S.; Kollman, P.A. Settle: An Analytical Version of the SHAKE and RATTLE Algorithm for Rigid Water Models. J. Comput. Chem. 1992, 13, 952–962. [Google Scholar] [CrossRef]
  26. Darden, T.; York, D.; Pedersen, L. Particle Mesh Ewald: An N Log (N) Method for Ewald Sums in Large Systems. J. Chem. Phys. 1993, 98, 10089–10092. [Google Scholar] [CrossRef] [Green Version]
Sample Availability: Samples of the compounds 1-21’ are available from the authors.
Figure 1. Aza-Claisen rearrangement (ACR) through amide enolate and its stereochemical outcome.
Figure 1. Aza-Claisen rearrangement (ACR) through amide enolate and its stereochemical outcome.
Molecules 24 04597 g001
Figure 2. Equilibrium of an amide enolate conformation.
Figure 2. Equilibrium of an amide enolate conformation.
Molecules 24 04597 g002
Scheme 1. Preparation of substrate for ACR. DIBAL: diisobuylaluminum hydride; THF: tetrahydrofuran.
Scheme 1. Preparation of substrate for ACR. DIBAL: diisobuylaluminum hydride; THF: tetrahydrofuran.
Molecules 24 04597 sch001
Scheme 2. Preparation of various substrates in alkene moiety. TFA: trifluoroacetic acid; TBAF: tetra-n-butylammonium fluoride; EDCI: N′-(3-dimethylaminopropyl)carbodiimide hydrochloride; DMAP: 4-dimethylaminopyridine; TBS: tert-butyldimethylsilyl.
Scheme 2. Preparation of various substrates in alkene moiety. TFA: trifluoroacetic acid; TBAF: tetra-n-butylammonium fluoride; EDCI: N′-(3-dimethylaminopropyl)carbodiimide hydrochloride; DMAP: 4-dimethylaminopyridine; TBS: tert-butyldimethylsilyl.
Molecules 24 04597 sch002
Scheme 3. Preparation of various ACR substrates in amide moiety. TBAI: tetra-n-butylammonium iodide.
Scheme 3. Preparation of various ACR substrates in amide moiety. TBAI: tetra-n-butylammonium iodide.
Molecules 24 04597 sch003
Scheme 4. Preparation of acyclic ACR substrates. DMF: tetra-n-butylammonium fluoride; PMB: para-nethoxyl benzyl.
Scheme 4. Preparation of acyclic ACR substrates. DMF: tetra-n-butylammonium fluoride; PMB: para-nethoxyl benzyl.
Molecules 24 04597 sch004
Scheme 5. Comparison of ACR conditions using various substrates.
Scheme 5. Comparison of ACR conditions using various substrates.
Molecules 24 04597 sch005
Figure 3. Crystal structure of macrolactam 14’.
Figure 3. Crystal structure of macrolactam 14’.
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Scheme 6. Mechanistic view of cation-dependent ACR.
Scheme 6. Mechanistic view of cation-dependent ACR.
Molecules 24 04597 sch006
Figure 4. 2D and 3D structures of four different conformations of 19 compound. (A) Sketch of trans, cis conformations and C-C-C-O dihedral angle. 3D structure of each compound in (B) Group1 and (C) Gruop2.
Figure 4. 2D and 3D structures of four different conformations of 19 compound. (A) Sketch of trans, cis conformations and C-C-C-O dihedral angle. 3D structure of each compound in (B) Group1 and (C) Gruop2.
Molecules 24 04597 g004
Figure 5. Comparison of structural stability of trans and cis conformations of Group1 compound. (A) Dihedral angle in CCCO of trans and cis conformations. Cartoon of structure superposition of every nano second frames of cluster obtained from (B) trans (green) and (C) cis conformations (pink).
Figure 5. Comparison of structural stability of trans and cis conformations of Group1 compound. (A) Dihedral angle in CCCO of trans and cis conformations. Cartoon of structure superposition of every nano second frames of cluster obtained from (B) trans (green) and (C) cis conformations (pink).
Molecules 24 04597 g005
Figure 6. Comparison of structural stability of trans and cis conformations in Group2 compound. (A) Dihedral angle in CCCO of trans and cis conformations. Cartoon of structure of the most popular clusters obtained from (B) trans (yellow) and (C) cis conformations (blue).
Figure 6. Comparison of structural stability of trans and cis conformations in Group2 compound. (A) Dihedral angle in CCCO of trans and cis conformations. Cartoon of structure of the most popular clusters obtained from (B) trans (yellow) and (C) cis conformations (blue).
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Table 1. Screening of ACR conditions. LHMDS: lithium hexamethyldisilazane.
Table 1. Screening of ACR conditions. LHMDS: lithium hexamethyldisilazane.
Molecules 24 04597 i001
EntryBaseSolventResult (%) a
1LHMDStoluene62
2iPrMgCltoluene78
32-MesitylMgBrtoluene53
4t-BuMgBrtoluene64
5n-PropylMgBrtoluene21
6EtMgBrtoluene31
7NaHMDStoluene- b
8KHMDStoluene- b
9iPrMgClbenzene84
10iPrMgClTHF23
11iPrMgCln-decane43
12iPrMgClbenzene cno reaction
13iPrMgClbenzene81
a Isolation yield; b Unidentified side product was obtained in 1 min.; c Reaction was carried out at the room temperature.

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Song, B.R.; Ha, M.W.; Kim, D.; Park, C.; Lee, K.W.; Paek, S.-M. Investigation of Grignard Reagent as an Advanced Base for Aza-Claisen Rearrangement. Molecules 2019, 24, 4597. https://doi.org/10.3390/molecules24244597

AMA Style

Song BR, Ha MW, Kim D, Park C, Lee KW, Paek S-M. Investigation of Grignard Reagent as an Advanced Base for Aza-Claisen Rearrangement. Molecules. 2019; 24(24):4597. https://doi.org/10.3390/molecules24244597

Chicago/Turabian Style

Song, Bo Reum, Min Woo Ha, Donghwan Kim, Chanin Park, Keun Woo Lee, and Seung-Mann Paek. 2019. "Investigation of Grignard Reagent as an Advanced Base for Aza-Claisen Rearrangement" Molecules 24, no. 24: 4597. https://doi.org/10.3390/molecules24244597

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