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Article

Purification and Molecular Docking Study on the Angiotensin I-Converting Enzyme (ACE)-Inhibitory Peptide Isolated from Hydrolysates of the Deep-Sea Mussel Gigantidas vrijenhoeki

1
Jeju Bio Research Center, Korea Institute of Ocean Science and Technology (KIOST), Jeju 63349, Republic of Korea
2
Department of Marine Biotechnology, University of Science and Technology (UST), Daejeon 34113, Republic of Korea
3
Department of Pharmaceutical Engineering, Soonchunhyang University, Asan 31538, Republic of Korea
4
Department of Food Technology and Nutrition, Chonnam National University, Yeosu 59626, Republic of Korea
5
Marine Ecosystem and Biological Research Center, Korea Institute of Ocean Science and Technology (KIOST), Busan 49111, Republic of Korea
*
Author to whom correspondence should be addressed.
Mar. Drugs 2023, 21(8), 458; https://doi.org/10.3390/md21080458
Submission received: 27 July 2023 / Revised: 15 August 2023 / Accepted: 19 August 2023 / Published: 21 August 2023
(This article belongs to the Special Issue Enzyme Inhibitors from Marine Resources)

Abstract

:
The objective of this study was to prepare an angiotensin I-converting enzyme (ACE)-inhibitory peptide from the hydrothermal vent mussel, Gigantidas vrijenhoeki. The G. vrijenhoeki protein was hydrolyzed by various hydrolytic enzymes. The peptic hydrolysate exhibited the highest ACE-inhibitory activity and was fractionated into four molecular weight ranges by ultrafiltration. The <1 kDa fraction exhibited the highest ACE inhibitory activity and was found to have 11 peptide sequences. Among the analyzed peptides, KLLWNGKM exhibited stronger ACE inhibitory activity and an IC50 value of 0.007 μM. To investigate the ACE-inhibitory activity of the analyzed peptides, a molecular docking study was performed. KLLWNGKM exhibited the highest binding energy (−1317.01 kcal/mol), which was mainly attributed to the formation of hydrogen bonds with the ACE active pockets, zinc-binding motif, and zinc ion. These results indicate that G. vrijenhoeki-derived peptides can serve as nutritional and pharmacological candidates for controlling blood pressure.

1. Introduction

Hypertension is a major healthcare concern that increases the risk of death, stroke, myocardial infarction, arteriosclerosis, cerebral hemorrhage, and other vascular diseases and is affected by various factors, such as salt intake, smoking, stress, and obesity [1,2]. As part of the complex regulatory system of blood pressure, angiotensin I-converting enzyme (ACE) plays a key role in maintaining blood pressure via the renin-angiotensin-aldosterone system [3]. ACE converts the inactive decapeptide, angiotensin I, by cleaving a dipeptide from the C-terminus to produce an active octapeptide, angiotensin II, a potent vasoconstrictor [4,5]. Moreover, it induces the inactivation of bradykinin, an anti-hypertensive vasodilator, and promotes an increase in blood pressure [6,7]. Therefore, ACE inhibition has become a promising approach for maintaining blood pressure within the normal range.
Several synthetic inhibitors, such as captopril, enalapril, lisinopril, and alacepril, have been developed and used extensively for the management of hypertension and cardiovascular disorders [8,9]. However, the use of these synthetic inhibitors are often accompanied by obvious drug-associated adverse effects, including headaches, insomnia, fever, cough, skin rashes, and increased blood potassium levels [8,10]. Therefore, it has become increasingly necessary to develop therapeutic agents that are free from adverse side effects and to develop effective ACE inhibitors derived from natural sources for the treatment and prevention of hypertension.
Several studies have reported that marine organisms are good sources of protein and contain bioactive peptides with potential biological activities, such as osteoblast differentiation [11,12], anti-cancer [13], antioxidative [14], and anti-inflammatory activities [15]. In particular, bioactive peptides with ACE-inhibitory activity isolated from marine organisms, such as Takifugu bimaculatus [16], Ulva intestinalis [17], Paralichthys olivaceus [18], Mytilus edulis [19], and Perna viridis [20] have been widely reported. Therefore, research on ACE-inhibitory peptides is of considerable interest to the pharmaceutical industry, and marine organisms are regarded as a promising source of ACE-inhibitory peptides [7]. Gigantidas vrijenhoeki is a newly discovered hydrothermal vent mussel species, first reported in 2020, and is known to inhabit the Onnuri Vent Fiedl (OVF) Central Indian Ridge [21,22].
The objective of the present study was to prepare protein hydrolysates and ACE-inhibitory peptides from G. vrijenhoeki, and to identify any bioactive peptides with ACE-inhibitory activity. In addition, we investigated the interactions between the bioactive compounds and ACE using molecular simulations.

2. Results and Discussion

2.1. Approximate Chemical Composition of G. vrijenhoeki

The approximate chemical composition of G. vrijenhoeki is presented in Table 1. The major chemical component of G. vrijenhoeki was found to be protein, the content of which accounted for 65.83 ± 4.94% of the total dry weight. The lipid, moisture, ash, and carbohydrate contents of G. vrijenhoeki were 16.64 ± 0.89%, 2.28 ± 0.04%, 6.29 ± 1.19% and 8.96 ± 0.57%, respectively. Compared to previous studies, the protein content of G. vrijenhoeki was found to be higher or similar to Chlamys farreri (66.18%) [23], Mytilus coruscus (53.2%) [24], and Perna canaliculus (43.0%) [25]. Therefore, G. vrijenhoeki can be considered to be richer in protein compared to similar species.

2.2. Amino Acid Profile of G. vrijenhoeki

The amino acid composition of G. vrijenhoeki muscle is listed in Table 2. Glutamic acid (16.39%), aspartic acid (10.20%), glycine (9.01%), and arginine (8.53%) were dominant in G. vrijenhoeki muscle. The major amino acids in fish protein and shellfish hydrolysates are glutamic acid, aspartic acid, and glycine [26]. In particular, in Mytilidae, such as M. edulis, M. coruscus, P. viridis, and P. canaliculus, glutamic acid, aspartic acid, glycine, and arginine are abundant [20,25,27]. In addition, Ijarotimi et al. (2023) reported that glutamic acid serves as a precursor to arginine, which is a precursor for nitric oxide formation that acts as a vasodilator of the arteries, thus lowering blood pressure [28]. Other studies have also reported the ACE inhibitory activity of protein hydrolysates isolated from blue- and green-lipped mussels [19,29,30,31]. Therefore, G. vrijenhoeki could be a potential source of ACE inhibitory peptides.

2.3. Preparation of GVHs and Their ACE Inhibitory Activity

G. vrijenhoeki hydrolysates (GVHs) were obtained by enzymatic hydrolysis with nine proteases, including papain, alcalase, flavourzyme, neutrase, bromelain, protamax, pepsin, trypsin, and α-chymotrypsin, under optimal conditions. The nine hydrolysates were evaluated for their ability to inhibit ACE activity. Among all of the enzymatic hydrolysates, the peptic hydrolysate exhibited the highest level of activity relative to the other enzymatic hydrolysates, with an IC50 value of 0.266 mg/mL (Table 3). Compared to previous studies, the ACE inhibitory activity of enzymatic hydrolysates from G. vrijenhoeki was more effective than those of seahorse (0.81 mg/mL) [8], Yellowbelly (3.98 mg/mL) [9], scallop (10.28 mg/mL) [32], and blue mussel (1.13 mg/mL) [19] hydrolysates. Interestingly, oysters (0.40 mg/mL) [33] exhibit a similar ACE inhibitory activity.
The peptide hydrolysate from G. vrijenhoeki was fractionated by ultrafiltration using membranes of different pore sizes (1 kDa, 5 kDa, and 10 kDa) to obtain fractions of >10 kDa, 5–10 kDa, 1–5 kDa, and <1 kDa. Among all of the fractions, the <1 kDa fraction exhibited the highest ACE inhibitory activity, with an IC50 value of 0.025 mg/mL (Table 4). Heo et al. (2017) previously reported that the ACE inhibitory efficiency of a peptide is strongly influenced by the molecular weight thereof. In addition, it has been reported that low-molecular-weight fractions tend to have a more potent ACE inhibitory activity [34,35]. Based on these results, we selected the <1 kDa fraction for further experiments.

2.4. Identification of an ACE Inhibitory Peptide

The molecular masses of the ACE-inhibitory peptides were determined. The <1 kDa fraction was subjected to micro Q-TOF mass spectrometry (MS) and tandem MS analysis, and the results revealed that the fraction was composed of 11 peptides (Figure 1). A synthetic peptide with the same sequence was synthesized and evaluated to validate its ACE inhibitory activity. As shown in Table 5, G. vrijenhoeki peptide (GVP)-10 (IC50 = 0.007 μM) exhibited stronger ACE inhibitory activity, followed by GVP-7 (IC50 = 0.024 μM), GVP-4 (IC50 = 0.067 μM), GVP-2 (IC50 = 0.162 μM), GVP-3 (IC50 = 0.292 μM), GVP-9 (IC50 = 0.435 μM), GVP-8 (IC50 = 0.513 μM), GVP-5 (IC50 = 0.582 μM), GVP-11 (IC50 = 0.795 μM), GVP-6 (IC50 = 1.390 μM), and GVP-1 (IC50 = 2.955 μM). Several reports suggest that the main substrates comprising peptides, such as hydrophobic amino acid residues (aromatic or branched chain) at the C-terminus and positively charged amino acids, are effective for ACE inhibitory activity [1,4,7,30,33,35,36]. This may explain the strong inhibitory activity of GVP-10 (KLLWNGKM) and GVP-7 (ALRPKF), which consist of aromatic amino acids (methionine, M; phenylalanine, F) and positively charged amino acids (lysine, K) at the C-terminus of the analyzed peptide.

2.5. Analysis of Molecular Docking Study

Molecular docking studies are effective analytical tools for investigating ligand-protein interactions to understand structure-activity relationships. Therefore, we investigated whether ACE-inhibitory peptides could interact with ACE proteins and inhibit ACE activity, by performing molecular docking analysis using Discovery Studio (Figure 2). ACE consists of three main active site pockets (S1, S′1 and S′2). These pockets are major active sites in ACE and contain different residues. The S1 pocket includes Ala354, Glu384, and Tyr523 residues, the S1′ pocket includes the Glu162 residue, and the S′2 pocket consists of the Gln281, His353, Lys511, His513, and Tyr520 residues [37]. The HEXXH zinc-binding motif is also a main active site, consisting of the His383, Glu384, and His387 residues, and zinc ions [38]. As shown in Table 6, the relative binding energy between GVP-10 and ACE was the highest, indicating that its binding to ACE was the most stable. The binding energy value of GVP-10 was −1317.01 kcal/mol. It was found to interact with the S1 pocket (Ala354, Glu384, and Tyr523), S′2 pocket (Gln281, His353, Lys511, His513, and Tyr520), and zinc-binding motif (His383, His387, Glu411, and zinc ion). Glycine and aspartic acid of GVP-10 were located in the S1 pocket, forming hydrogen bonds with Ala354, Glu384, and Tyr523. Furthermore, methionine of GVP-10 shared hydrogen bond with Gln281, Lys511, His513, and Tyr520 in the S′2 pocket (Figure 2C). Based on these results, GVP-10 could directly interact with the active sites in the S1 and S′2 pockets, thus contributing to its competitive inhibition modalities [39]. In addition, GVP-10 interacted with a zinc-binding motif. Zinc ions play a key role in maintaining ACE activity, and residues in the zinc-binding motif bind to zinc ions to form tetrahedral coordinates [40]. Previous studies have shown that interactions between ACE-inhibitory peptides and the tetrahedral coordination of zinc ions can inhibit ACE activity [41,42]. Therefore, interactions with zinc ions can inhibit ACE inhibitory activity. Among the components of GVP-10, lysine formed a hydrogen bond with His383, and aspartic acid interacted with His411 and zinc ions through a hydrogen bond, facilitating interaction with the zinc-binding motif. Kaewsahnguan et al. (2021) reported that negatively charged amino acids in the ACE active site can interact with zinc ions to lower the catalytic rate through chelation of the critical zinc atom if enzymatic activity occurs [43].
As shown in Figure 2C, the aspartic acid of GVP-10 interacts with the zinc ion and residue Glu411, leading to the distortion of the tetrahedral geometry of ACE. Moreover, the 11 residues surrounding the ACE active site–Ser355, Ala356, Pro407, His410, Phe512, Ser516, Ser517, Val518, Pro519, Arg522, and Phe527 significantly contributed to the stabilization of the ACE inhibitory peptide-ACE complex.

3. Materials and Methods

3.1. Materials

A deep-sea mussel (G. vrijenhoeki) specimen was collected with a video-guided hydraulic grab (Oktopus, Hohenwestedt, Germany) apparatus from the ONNURI vent field in the Indian Ocean (11°14′55.92″ S, 66°15′15.10″ E, at 2014.5 m depth) using the R/V ISABU [21]. The collected sample was immediately rinsed with seawater, directly frozen in a deep freeze, and stored at −80 °C until extraction. Alcalase 2.4 L FG, Neutrase 0.8 L, Flavourzyme 500 MG, and Protamex were purchased from Novo Co. (Novozyme Nordisk, Bagasvaerd, Denmark). Pepsin, trypsin, α-chymotrypsin, bromelain, and papain were purchased from Sigma–Aldrich (St. Louis, MO, USA). All of the other chemicals and reagents used were of analytical grade.

3.2. Chemical Composition of G. vrijenhoeki

The chemical composition of G. vrijenhoeki was determined as described by Horwitz et al. [44]. Briefly, the crude protein and lipid contents were determined using the Kjeldahl and Soxhlet methods, respectively. The moisture content was determined by placing the sample in a dry oven, and crude ash was prepared at 550 °C in a dry-type furnace.

3.3. Amino Acid Composition of G. vrijenhoeki

The amino acid composition was analyzed according to a previously developed high-performance liquid chromatography (HPLC) method [14]. The samples were added to 30 mL of 6 N HCl and incubated for 24 h at 130 °C. The mixtures were filtered with a 0.45 μm syringe filter and used for HPLC analysis. The HPLC system used for the analysis consisted of an Ultimated3000 (Thermo Fisher Scientific, Waltham, MA, USA) and a FL detector 1260FLD (Agilent Technologies, Inc., Santa Clara, CA, USA). Analyses were performed in the binary gradient mode. An Inno C18 column (4.6 × 150 mm, 5 μm, YoungJin Biochrom, Gyeonggi, Korea) was used. The chromatogram was obtained using a fluorescence spectrophotometer at 340/450 nm and 266/305 nm and absorbance at 338 nm.

3.4. Preparation of Enzymatic Hydrolysates of G. vrijenhoeki

G. vrijenhoeki enzymatic hydrolysis was performed according to a previous method described by Lee et al. [45]. G. vrijenhoeki enzymatic hydrolysates were prepared using alcalase, neutrase, flavourzyme, protamex, pepsin, trypsin,-chymotrypsin, bromelain, and papain under optimal conditions (Table 7). Briefly, 1 g G. vrijenhoeki and 10 mg of each enzyme were mixed in 100 mL distilled water. The mixtures were then incubated in a shaking incubator for 24 h. After 24 h, the mixtures were incubated at 100 °C for 10 min to inactivate the enzyme, and the pH was adjusted to 7.0. The mixtures were clarified by centrifugation and filtered through Whatman filter paper. The filtered mixtures were lyophilized and kept at −80 °C for further experiments.

3.5. Preparation of Molecular Weight Fractionation

GVH was passed through ultrafiltration (UF) membranes (molecular weight cut-offs of 1 kDa, 5 kDa, and 10 kDa) using a laboratory-scale tangential flow filtration (TFF) system (Millipore, Burlington, MA, USA). GVH was subjected to molecular weight fractionation to obtain peptides with molecular weights <1 kDa (1 kDa or smaller), 1–5 kDa (between 1 and 5 kDa), 5–10 kDa (between 5 and 10 kDa), and >10 kDa (10 kDa and larger). All recovered fractions were lyophilized and stored at −80 °C until use.

3.6. Identification of ACE Inhibitory Peptide

The molecular masses and amino acid sequences of the purified peptides were determined using a quadrupole time-of-flight mass spectrometer (Micro Q-TOF III mass spectrometer, Bruker Daltonics, Bremen, Germany) coupled with an electrospray ionization (ESI) source. The fraction was separately infused into the electrospray source after being dissolved in distilled water containing 0.1% formic acid, and the molecular mass was determined from the doubly charged [M+2H]2 states in the mass spectrum. Following molecular mass determination, peptides were automatically selected for fragmentation, and sequence information was obtained by tandem mass spectrometry (MS) analysis.

3.7. Synthesis of the Purified Peptide

The peptide was chemically synthesized at the peptide synthesizer facility of PepTron Inc. (Daejeon, Korea). The peptides were synthesized using the Fmoc solid-phase method with a peptide synthesizer (PeptrEX-R48; Peptron, Inc., Deajeon, Korea). The synthetic peptides were purified using HPCL (Shimadzu, Kyoto, Japan) on a Capcell Pak C18 column (4.6 × 50 mm, 5 μm, Shiseido, Kyoto, Japan). The column was developed at a flow rate of 1.0 mL/min by a linear gradient of acetonitrile containing 0.1% trifluoroacetic acid. The identity of synthetic peptides was confirmed by liquid chromatography-mass spectroscopy (LC-MS) (Shimadzu, Japan), and the purity of the synthetic peptide was confirmed to be over 95%.

3.8. ACE Inhibitory Activity Assay

ACE inhibitory activity was measured using the Dojindo ACE Kit-WET kit (Dojindo Laboratories, Kumamoto, Japan), according to the manufacturer’s instructions. The ACE-inhibitory activity was calculated as follows:
A C E   i n h i b i t o r y   a c t i v i t y   ( % ) = A c o n t r o l A s a m p l e A c o n t r o l A b l a n k × 100 %
where Acontrol is the absorbance of the positive control, Ablank is the absorbance of the blank containing distilled water, and Asample is the absorbance of the sample. The IC50 value was determined as the concentration of inhibitor required to inhibit 50% of the ACE activity.

3.9. Molecular Docking Analysis

The molecular docking analysis was performed according to the method described by Kang et al. [46] with slight modifications. For molecular docking studies, the crystal structure of ACE (PDB code:1O86) was obtained from the protein data bank (PDB; https://www.rcsb.org/, accessed on 11 October 2022). The structures of the 11 peptides derived from GVH were drawn using the CDOCKER tool. Docking of bioactive peptides to ACE was performed using the Lib Dock tool in Discovery Studio 2022 (Biovia, San Diego, CA, USA).

3.10. Statistical Analysis

All quantitative data are presented as means ± standard deviation and represent at least three individual experiments conducted using fresh reagents. Statistical comparisons of the mean values were performed using analysis of variance (ANOVA) followed by Duncan’s multiple range test using SPSS software v29. Differences in mean values were considered statistically significant at * p < 0.05, ** p < 0.01.

4. Conclusions

In this study, G. vrijenhoeki protein was hydrolyzed using alcalase, neutrase, flavourzyme, protamex, pepsin, trypsin, α-chymotrypsin, bromelain, and papain, and their evaluated ACE inhibitory activity. Among enzymatic hydrolysates, peptic hydrolysate showed the highest ACE inhibitory activity compared to other hydrolysates. Subsequently, the peptic hydrolysate was fractionated by ultrafiltration and their fractions significantly improved the ACE inhibitory activity compared to hydrolysate. The low molecular weight fraction (>1 kDa) showed the highest ACE inhibitory activity and identified eleven ACE inhibitory peptides. Among the identified peptides, GVP-10 (KLLWNGKM) exhibited the strongest ACE inhibitory activity with an IC50 value of 0.007 μM. Molecular docking studies indicated that GVP-10 was able to bind to residues in the ACE-active pockets (S1 and S’2), interact with zinc-binding motifs, and coordinate with zinc ions. Based on these results, we propose that the ACE-inhibitory peptide isolated from the G. vrijenhoeki protein has a beneficial effect in regulating blood pressure.

Author Contributions

Writing an original draft and data curation, S.-Y.H.; Investigation and data acquisition; N.K., E.-A.K. and J.K.; Writing review & editing, S.-H.L. and G.A.; Conceptualization, J.H.O. and A.Y.S.; supervision and project administration, D.K. and S.-J.H. All authors have read and agreed to the published version of the manuscript.

Funding

This research was supported by Korea Institute of Marine Science & Technology (KIMST) funded by the Ministry of Oceans and Fisheries (20170411 and 21210466).

Data Availability Statement

Data is contained within the article.

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Heo, S.-Y.; Ko, S.-C.; Kim, C.S.; Oh, G.-W.; Ryu, B.; Qian, Z.J.; Kim, G.; Park, W.S.; Choi, I.-W.; Phan, T.T.V. A heptameric peptide purified from Spirulina sp. gastrointestinal hydrolysate inhibits angiotensin I-converting enzyme-and angiotensin II-induced vascular dysfunction in human endothelial cells. Int. J. Mol. Med. 2017, 39, 1072–1082. [Google Scholar] [CrossRef] [PubMed]
  2. Ko, S.-C.; Kim, J.-Y.; Lee, J.M.; Yim, M.-J.; Kim, H.-S.; Oh, G.-W.; Kim, C.H.; Kang, N.; Heo, S.-J.; Baek, K. Angiotensin I-Converting Enzyme (ACE) Inhibition and Molecular Docking Study of Meroterpenoids Isolated from Brown Alga, Sargassum macrocarpum. Int. J. Mol. Sci. 2023, 24, 11065. [Google Scholar] [CrossRef] [PubMed]
  3. Xu, Z.; Wu, C.; Sun-Waterhouse, D.; Zhao, T.; Waterhouse, G.I.; Zhao, M.; Su, G. Identification of post-digestion angiotensin-I converting enzyme (ACE) inhibitory peptides from soybean protein Isolate: Their production conditions and in silico molecular docking with ACE. Food Chem. 2021, 345, 128855. [Google Scholar] [CrossRef] [PubMed]
  4. Bhaskar, B.; Ananthanarayan, L.; Jamdar, S. Purification, identification, and characterization of novel angiotensin I-converting enzyme (ACE) inhibitory peptides from alcalase digested horse gram flour. LWT 2019, 103, 155–161. [Google Scholar] [CrossRef]
  5. Solanki, D.; Sakure, A.; Prakash, S.; Hati, S. Characterization of Angiotensin I-Converting Enzyme (ACE) inhibitory peptides produced in fermented camel milk (Indian breed) by Lactobacillus acidophilus NCDC-15. J. Food Sci. Technol. 2022, 59, 3567–3577. [Google Scholar] [CrossRef]
  6. Wang, J.; Hu, J.; Cui, J.; Bai, X.; Du, Y.; Miyaguchi, Y.; Lin, B. Purification and identification of a ACE inhibitory peptide from oyster proteins hydrolysate and the antihypertensive effect of hydrolysate in spontaneously hypertensive rats. Food Chem. 2008, 111, 302–308. [Google Scholar] [CrossRef]
  7. Ishak, N.H.; Shaik, M.I.; Yellapu, N.K.; Howell, N.K.; Sarbon, N.M. Purification, characterization and molecular docking study of angiotensin-I converting enzyme (ACE) inhibitory peptide from shortfin scad (Decapterus macrosoma) protein hydrolysate. J. Food Sci. Technol. 2021, 58, 4567–4577. [Google Scholar] [CrossRef]
  8. Shi, J.; Su, R.-Q.; Zhang, W.-T.; Chen, J. Purification and the secondary structure of a novel angiotensin I-converting enzyme (ACE) inhibitory peptide from the alcalase hydrolysate of seahorse protein. J. Food Sci. Technol. 2020, 57, 3927–3934. [Google Scholar] [CrossRef]
  9. Su, Y.; Chen, S.; Cai, S.; Liu, S.; Pan, N.; Su, J.; Qiao, K.; Xu, M.; Chen, B.; Yang, S. A novel angiotensin-I-converting enzyme (ACE) inhibitory peptide from Takifugu flavidus. Mar. Drugs 2021, 19, 651. [Google Scholar] [CrossRef]
  10. Ko, S.-C.; Jang, J.; Ye, B.-R.; Kim, M.-S.; Choi, I.-W.; Park, W.-S.; Heo, S.-J.; Jung, W.-K. Purification and molecular docking study of angiotensin I-converting enzyme (ACE) inhibitory peptides from hydrolysates of marine sponge Stylotella aurantium. Process Biochem. 2017, 54, 180–187. [Google Scholar] [CrossRef]
  11. Nguyen, M.H.T.; Qian, Z.-J.; Nguyen, V.-T.; Choi, I.-W.; Heo, S.-J.; Oh, C.H.; Kang, D.-H.; Kim, G.H.; Jung, W.-K. Tetrameric peptide purified from hydrolysates of biodiesel byproducts of Nannochloropsis oculata induces osteoblastic differentiation through MAPK and Smad pathway on MG-63 and D1 cells. Process Biochem. 2013, 48, 1387–1394. [Google Scholar] [CrossRef]
  12. Heo, S.Y.; Ko, S.C.; Nam, S.Y.; Oh, J.; Kim, Y.M.; Kim, J.I.; Kim, N.; Yi, M.; Jung, W.K. Fish bone peptide promotes osteogenic differentiation of MC3T3-E1 pre-osteoblasts through upregulation of MAPKs and Smad pathways activated BMP-2 receptor. Cell Biochem. Funct. 2018, 36, 137–146. [Google Scholar] [CrossRef] [PubMed]
  13. Ko, S.-C.; Heo, S.-Y.; Choi, S.-W.; Qian, Z.-J.; Heo, S.-J.; Kang, D.-H.; Kim, N.; Jung, W.-K. A heptameric peptide isolated from the marine microalga Pavlova lutheri suppresses PMA-induced secretion of matrix metalloproteinase-9 through the inactivation of the JNK, p38, and NF-κB pathways in human fibrosarcoma cells. J. Appl. Phycol. 2018, 30, 2367–2378. [Google Scholar] [CrossRef]
  14. Kang, N.; Kim, E.-A.; Kim, J.; Lee, S.-H.; Heo, S.-J. Identifying potential antioxidant properties from the viscera of sea snails (Turbo cornutus). Mar. Drugs 2021, 19, 567. [Google Scholar] [CrossRef] [PubMed]
  15. Marasinghe, C.K.; Jung, W.K.; Je, J.Y. Anti-inflammatory action of ark shell (Scapharca subcrenata) protein hydrolysate in LPS-stimulated RAW264. 7 murine macrophages. J. Food Biochem. 2022, 46, e14493. [Google Scholar] [CrossRef] [PubMed]
  16. Cai, S.; Pan, N.; Xu, M.; Su, Y.; Qiao, K.; Chen, B.; Zheng, B.; Xiao, M.; Liu, Z. ACE inhibitory peptide from skin collagen hydrolysate of Takifugu bimaculatus as potential for protecting HUVECs injury. Mar. Drugs 2021, 19, 655. [Google Scholar] [CrossRef] [PubMed]
  17. Sun, S.; Xu, X.; Sun, X.; Zhang, X.; Chen, X.; Xu, N. Preparation and identification of ACE inhibitory peptides from the marine macroalga Ulva intestinalis. Mar. Drugs 2019, 17, 179. [Google Scholar] [CrossRef]
  18. Oh, J.-Y.; Kim, E.-A.; Lee, H.; Kim, H.-S.; Lee, J.-S.; Jeon, Y.-J. Antihypertensive effect of surimi prepared from olive flounder (Paralichthys olivaceus) by angiotensin-I converting enzyme (ACE) inhibitory activity and characterization of ACE inhibitory peptides. Process Biochem. 2019, 80, 164–170. [Google Scholar] [CrossRef]
  19. Neves, A.C.; Harnedy, P.A.; FitzGerald, R.J. Angiotensin converting enzyme and dipeptidyl peptidase-iv inhibitory, and antioxidant activities of a blue mussel (Mytilus edulis) meat protein extract and its hydrolysates. J. Aquat. Food Prod. Technol. 2016, 25, 1221–1233. [Google Scholar] [CrossRef]
  20. Chakraborty, K.; Chakkalakal, S.J.; Joseph, D.; Asokan, P.; Vijayan, K. Nutritional and antioxidative attributes of green mussel (Perna viridis L.) from the southwestern coast of India. J. Aquat. Food Prod. Technol. 2016, 25, 968–985. [Google Scholar] [CrossRef]
  21. Ryu, T.; Kim, J.G.; Lee, J.; Yu, O.H.; Yum, S.; Kim, D.; Woo, S. First transcriptome assembly of a newly discovered vent mussel, Gigantidas vrijenhoeki, at Onnuri Vent Field on the northern Central Indian Ridge. Mar. Genom. 2021, 57, 100819. [Google Scholar] [CrossRef] [PubMed]
  22. Jang, S.-J.; Ho, P.-T.; Jun, S.-Y.; Kim, D.; Won, Y.-J. A newly discovered Gigantidas bivalve mussel from the Onnuri Vent Field in the northern Central Indian Ridge. Deep. Sea Res. Part I Oceanogr. Res. Pap. 2020, 161, 103299. [Google Scholar] [CrossRef]
  23. Wu, Z.X.; Hu, X.P.; Zhou, D.Y.; Tan, Z.F.; Liu, Y.X.; Xie, H.K.; Rakariyatham, K.; Shahidi, F. Seasonal variation of proximate composition and lipid nutritional value of two species of scallops (Chlamys farreri and Patinopecten yessoensis). Eur. J. Lipid Sci. Technol. 2019, 121, 1800493. [Google Scholar] [CrossRef]
  24. Li, G.; Li, J.; Li, D. Seasonal variation in nutrient composition of Mytilus coruscus from China. J. Agric. Food Chem. 2010, 58, 7831–7837. [Google Scholar] [CrossRef]
  25. Siriarchavatana, P.; Kruger, M.C.; Miller, M.R.; Tian, H.S.; Wolber, F.M. The preventive effects of greenshell mussel (Perna canaliculus) on early-stage metabolic osteoarthritis in rats with diet-induced obesity. Nutrients 2019, 11, 1601. [Google Scholar] [CrossRef]
  26. Je, J.-Y.; Park, S.Y.; Hwang, J.-Y.; Ahn, C.-B. Amino acid composition and in vitro antioxidant and cytoprotective activity of abalone viscera hydrolysate. J. Funct. Foods 2015, 16, 94–103. [Google Scholar] [CrossRef]
  27. Jeong, Y.-R.; Park, J.-S.; Nkurunziza, D.; Cho, Y.-J.; Chun, B.-S. Valorization of blue mussel for the recovery of free amino acids rich products by subcritical water hydrolysis. J. Supercrit. Fluids 2021, 169, 105135. [Google Scholar] [CrossRef]
  28. Ijarotimi, O.S.; Akinola-Ige, A.O.; Oluwajuyitan, T.D. Okra seeds proteins: Amino acid profile, free radical scavenging activities and inhibition of diabetes and hypertensive converting enzymes indices. Meas. Food 2023, 11, 100101. [Google Scholar] [CrossRef]
  29. Je, J.-Y.; Park, P.-J.; Byun, H.-G.; Jung, W.-K.; Kim, S.-K. Angiotensin I converting enzyme (ACE) inhibitory peptide derived from the sauce of fermented blue mussel, Mytilus edulis. Bioresour. Technol. 2005, 96, 1624–1629. [Google Scholar] [CrossRef]
  30. Jayaprakash, R.; Perera, C.O. Partial purification and characterization of bioactive peptides from cooked New Zealand green-lipped mussel (Perna canaliculus) protein hydrolyzates. Foods 2020, 9, 879. [Google Scholar] [CrossRef]
  31. Suo, S.-K.; Zhao, Y.-Q.; Wang, Y.-M.; Pan, X.-Y.; Chi, C.-F.; Wang, B. Seventeen novel angiotensin converting enzyme (ACE) inhibitory peptides from the protein hydrolysate of Mytilus edulis: Isolation, identification, molecular docking study, and protective function on HUVECs. Food Funct. 2022, 13, 7831–7846. [Google Scholar] [CrossRef] [PubMed]
  32. Zhang, L.; Liu, Y.; Lu, D.; Han, J.; Lu, X.; Tian, Z.; Wang, Z. Angiotensin converting enzyme inhibitory, antioxidant activities, and antihyperlipidaemic activities of protein hydrolysates from scallop mantle (Chlamys farreri). Int. J. Food Prop. 2015, 18, 33–42. [Google Scholar] [CrossRef]
  33. Xie, C.-L.; Kim, J.-S.; Ha, J.-M.; Choung, S.-Y.; Choi, Y.-J. Angiotensin I-converting enzyme inhibitor derived from cross-linked oyster protein. BioMed Res. Int. 2014, 2014, 379234. [Google Scholar] [CrossRef] [PubMed]
  34. Zhao, Y.; Li, B.; Dong, S.; Liu, Z.; Zhao, X.; Wang, J.; Zeng, M. A novel ACE inhibitory peptide isolated from Acaudina molpadioidea hydrolysate. Peptides 2009, 30, 1028–1033. [Google Scholar] [CrossRef]
  35. Ko, S.-C.; Kang, N.; Kim, E.-A.; Kang, M.C.; Lee, S.-H.; Kang, S.-M.; Lee, J.-B.; Jeon, B.-T.; Kim, S.-K.; Park, S.-J. A novel angiotensin I-converting enzyme (ACE) inhibitory peptide from a marine Chlorella ellipsoidea and its antihypertensive effect in spontaneously hypertensive rats. Process Biochem. 2012, 47, 2005–2011. [Google Scholar] [CrossRef]
  36. Li, Y.; Sadiq, F.A.; Fu, L.; Zhu, H.; Zhong, M.; Sohail, M. Identification of angiotensin I-converting enzyme inhibitory peptides derived from enzymatic hydrolysates of razor clam Sinonovacula constricta. Mar. Drugs 2016, 14, 110. [Google Scholar] [CrossRef]
  37. Li, X.; Feng, C.; Hong, H.; Zhang, Y.; Luo, Z.; Wang, Q.; Luo, Y.; Tan, Y. Novel ACE inhibitory peptides derived from whey protein hydrolysates: Identification and molecular docking analysis. Food Biosci. 2022, 48, 101737. [Google Scholar] [CrossRef]
  38. Lin, Z.; Lai, J.; He, P.; Pan, L.; Zhang, Y.; Zhang, M.; Wu, H. Screening, ACE-inhibitory mechanism and structure-activity relationship of a novel ACE-inhibitory peptide from Lepidium meyenii (Maca) protein hydrolysate. Food Biosci. 2023, 52, 102374. [Google Scholar] [CrossRef]
  39. Chen, J.; Ryu, B.; Zhang, Y.; Liang, P.; Li, C.; Zhou, C.; Yang, P.; Hong, P.; Qian, Z.J. Comparison of an angiotensin-I-converting enzyme inhibitory peptide from tilapia (Oreochromis niloticus) with captopril: Inhibition kinetics, in vivo effect, simulated gastrointestinal digestion and a molecular docking study. J. Sci. Food Agric. 2020, 100, 315–324. [Google Scholar] [CrossRef]
  40. Soleymanzadeh, N.; Mirdamadi, S.; Mirzaei, M.; Kianirad, M. Novel β-casein derived antioxidant and ACE-inhibitory active peptide from camel milk fermented by Leuconostoc lactis PTCC1899: Identification and molecular docking. Int. Dairy J. 2019, 97, 201–208. [Google Scholar] [CrossRef]
  41. Renjuan, L.; Xiuli, Z.; Liping, S.; Yongliang, Z. Identification, in silico screening, and molecular docking of novel ACE inhibitory peptides isolated from the edible symbiot Boletus griseus-Hypomyces chrysospermus. LWT 2022, 169, 114008. [Google Scholar] [CrossRef]
  42. Pan, D.; Cao, J.; Guo, H.; Zhao, B. Studies on purification and the molecular mechanism of a novel ACE inhibitory peptide from whey protein hydrolysate. Food Chem. 2012, 130, 121–126. [Google Scholar] [CrossRef]
  43. Kaewsahnguan, T.; Noitang, S.; Sangtanoo, P.; Srimongkol, P.; Saisavoey, T.; Reamtong, O.; Choowongkomon, K.; Karnchanatat, A. A novel angiotensin I-converting enzyme inhibitory peptide derived from the trypsin hydrolysates of salmon bone proteins. PLoS ONE 2021, 16, e0256595. [Google Scholar] [CrossRef] [PubMed]
  44. Horwitz, W.; Latimer, G.W., Jr. Official Methods of Analysis, 15th ed.; Association of Official Analytical Chemists: Gaithersburg, MD, USA, 1990. [Google Scholar]
  45. Lee, H.-G.; Kim, H.-S.; Oh, J.-Y.; Lee, D.-S.; Yang, H.-W.; Kang, M.-C.; Kim, E.-A.; Kang, N.; Kim, J.; Heo, S.-J. Potential antioxidant properties of enzymatic hydrolysates from Stichopus japonicus against hydrogen peroxide-induced oxidative stress. Antioxidants 2021, 10, 110. [Google Scholar] [CrossRef]
  46. Kang, N.; Heo, S.-Y.; Cha, S.-H.; Ahn, G.; Heo, S.-J. In Silico Virtual Screening of Marine Aldehyde Derivatives from Seaweeds against SARS-CoV-2. Mar. Drugs 2022, 20, 399. [Google Scholar] [CrossRef]
Figure 1. LC-MS chromatogram of <1 kDa fraction from G. vrijenhoeki protein.
Figure 1. LC-MS chromatogram of <1 kDa fraction from G. vrijenhoeki protein.
Marinedrugs 21 00458 g001
Figure 2. Predicted binding site of GVP-10 with ACE protein (A,B) and specific points of interaction between GVP-10 and ACE protein (C).
Figure 2. Predicted binding site of GVP-10 with ACE protein (A,B) and specific points of interaction between GVP-10 and ACE protein (C).
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Table 1. Approximate chemical composition of G. vrijenhoeki.
Table 1. Approximate chemical composition of G. vrijenhoeki.
Scientific NameProteinLipidMoistureAshCarbohydrate
G. vrijenhoeki65.83 ± 4.9416.64 ± 0.892.28 ± 0.046.29 ± 1.198.96 ± 0.57
Table 2. Total amino acids composition of G. vrijenhoeki.
Table 2. Total amino acids composition of G. vrijenhoeki.
Amino AcidContent (%)
Aspartic acid10.20
Glutamic acid16.39
Serine5.17
Histidine2.14
Glycine9.01
Threonine5.64
Arginine8.53
Alanine4.92
Taurine0.88
Tyrosine4.04
Valine4.61
Methionine2.73
Phenylalanine3.65
Isoleucine4.60
Leucine6.79
Lysine6.35
Proline4.35
Total100.000
Table 3. ACE inhibitory activity of enzymatic hydrolysates from G. vrijenhoeki.
Table 3. ACE inhibitory activity of enzymatic hydrolysates from G. vrijenhoeki.
EnzymeIC50 Value (mg/mL)
Papain0.401 ± 0.001 f
Alcalase0.319 ± 0.003 d
Flavourzyme0.780 ± 0.070 i
Neutrase0.417 ± 0.010 h
Bromelain0.402 ± 0.012 g
Protamax0.281 ± 0.011 b
Pepsin0.266 ± 0.004 a
Trypsin0.334 ± 0.001 e
α-chymotrypsin0.302 ± 0.001 c
The concentration of an inhibitor required to inhibit 50% of ACE activity. The values of IC50 were determined by triplicate individual experiments. Means with different letters are significantly different (p < 0.05).
Table 4. ACE inhibitory activity of molecular weight fractions of peptic hydrolysate from G. vrijenhoeki.
Table 4. ACE inhibitory activity of molecular weight fractions of peptic hydrolysate from G. vrijenhoeki.
Molecular Weight FractionIC50 Value (mg/mL)
Pepsin hydrolysates0.266 ± 0.004 e
<1 kDa0.025 ± 0.022 a
1–5 kDa0.060 ± 0.006 b
5–10 kDa0.067 ± 0.001 c
>10 kDa0.351 ± 0.039 d
The concentration of an inhibitor required to inhibit 50% of ACE activity. The values of IC50 were determined by triplicate individual experiments. Means with different letters are significantly different (p < 0.05).
Table 5. ACE inhibitory activity of peptides from G. vrijenhoeki peptic hydrolysate.
Table 5. ACE inhibitory activity of peptides from G. vrijenhoeki peptic hydrolysate.
PeptidePeptide SequenceMolecular Weight (Da)IC50 Value (μM)
GVP-1KLQE517.292.955 ± 0.165 k
GVP-2KVLH496.320.162 ± 0.002 d
GVP-3KVHL496.320.292 ± 0.013 e
GVP-4LVR387.270.067 ± 0.005 c
GVP-5PSLVG472.270.582 ± 0.008 h
GVP-6LNSL446.261.390 ± 0.011 j
GVP-7ALRPKF366.230.024 ± 0.017 b
GVP-8PGLADMR380.190.513 ± 0.002 g
GVP-9LLR401.280.435 ± 0.007 f
GVP-10KLLWNGKM495.280.007 ± 0.002 a
GVP-11YALPHAL392.720.795 ± 0.015 i
The concentration of an inhibitor required to inhibit 50% of ACE activity. The values of IC50 were determined by triplicate individual experiments. Means with different letters are significantly different (p < 0.05).
Table 6. Interaction between ACE inhibitory peptide and ACE from molecular docking simulation.
Table 6. Interaction between ACE inhibitory peptide and ACE from molecular docking simulation.
PeptidePeptide
Sequence
Binding
Energy
(kcal/mol)
ACE Residues
GVP-1KLQE−449.06Glu162, Gln281, His353, Ala354, His383, Lys511, Phe512, His513, Tyr520
GVP-2KVLH−992.454Glu162, Gln281, His353, Ala354, Ser355, His383, Glu384, His387, Glu411, Asp415, Asp453, Lys511, His513, Tyr523, Phe527, Zn2+
GVP-3KVHL−884.496Glu162, His353, Ala354, Ser355, His383, Glu384, His387, Asp415, Asp453, Lys511, Phe512, His513, Val518, Arg522, Tyr523, Phe523, Phe527, Zn2+
GVP-4LVR−570.048Glu162, Gln281, His353, Ala354, His383, Glu384, His387, Glu411, Asp415, Asp453, Lys454, Lys511, Tyr520, Tyr523, Phe527, Zn2+
GVP-5PSLVG−684.558His353, Ala354, Ser355, Ala356, His383, Glu384, His387, Phe391, His410, Glu411, Phe512, His513, Val518, Arg522, Tyr523, Phe527, Zn2+
GVP-6LNSL−607.594Glu162, His353, Ala354, Ser355, Ala356, His383, Glu384, His387, Phe391, Glu411, Lys511, Phe512, His513, Val518, Arg522, Tyr523, Zn2+
GVP-7ALRPKF−670.681Glu162, His353, Ala354, Ser355, Ala356, His383, Glu384, His387, Phe391, His410, Glu411, Asp415, Asp453, Lys511, Phe512, His513, Ser516, Val518, Tyr523, Phe527, Zn2+
GVP-8PGLADMR−565.024Gln281, His353, Ala354, Ser355, Ala356, His383, Glu384, His387, Phe391, Pro407, His410, Glu411, Asp415, Asp453, Lys454, Lys511, Phe512, His513, Val518, Tyr523, Phe527, Zn2+
GVP-9LLR−540.849Glu162, His353, Ala354, His383, Glu384, His357, Glu411, Asp415, Asp453, Lys454, Tyr523, Phe527, Zn2+
GVP-10KLLWNGKM−1317.01Gln281, His353, Ala354, Ser355, Ala356, His383, Glu384, His387, Pro407, His410, Glu411, Lys511, Phe512, His513, Ser516, Ser517, Val518, Pro519, Tyr520, Arg522, Tyr523, Phe527, Zn2+
GVP-11YALPHAL−782.256Gln281, His353, Ala354, Ser355, Ala356, His383, Glu384, His387, Phe391, Pro407, His410, Glu411, Asp415, Asp453, Lys454, Lys511, Phe512, His513, Val518, Tyr523, Phe527, Zn2+
Table 7. Optimal conditions of enzymatic hydrolysis for various enzymes.
Table 7. Optimal conditions of enzymatic hydrolysis for various enzymes.
EnzymeOptimal Conditions
pHTemp. (°C)
Alcalase8.050
Flavourzyme7.050
Neutrase6.050
Protamex6.040
Pepsin2.037
Trypsin8.037
α-chymotrypsin8.037
Bromelain7.050
Papain7.060
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Heo, S.-Y.; Kang, N.; Kim, E.-A.; Kim, J.; Lee, S.-H.; Ahn, G.; Oh, J.H.; Shin, A.Y.; Kim, D.; Heo, S.-J. Purification and Molecular Docking Study on the Angiotensin I-Converting Enzyme (ACE)-Inhibitory Peptide Isolated from Hydrolysates of the Deep-Sea Mussel Gigantidas vrijenhoeki. Mar. Drugs 2023, 21, 458. https://doi.org/10.3390/md21080458

AMA Style

Heo S-Y, Kang N, Kim E-A, Kim J, Lee S-H, Ahn G, Oh JH, Shin AY, Kim D, Heo S-J. Purification and Molecular Docking Study on the Angiotensin I-Converting Enzyme (ACE)-Inhibitory Peptide Isolated from Hydrolysates of the Deep-Sea Mussel Gigantidas vrijenhoeki. Marine Drugs. 2023; 21(8):458. https://doi.org/10.3390/md21080458

Chicago/Turabian Style

Heo, Seong-Yeong, Nalae Kang, Eun-A Kim, Junseong Kim, Seung-Hong Lee, Ginnae Ahn, Je Hyeok Oh, A Young Shin, Dongsung Kim, and Soo-Jin Heo. 2023. "Purification and Molecular Docking Study on the Angiotensin I-Converting Enzyme (ACE)-Inhibitory Peptide Isolated from Hydrolysates of the Deep-Sea Mussel Gigantidas vrijenhoeki" Marine Drugs 21, no. 8: 458. https://doi.org/10.3390/md21080458

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