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Metabolites, Volume 10, Issue 8

2020 August - 36 articles

Cover Story: Metabolomics approaches are useful tools for the simultaneous detection of endogenous metabolites affected by drug use. We performed comparative metabolic profiling of three psychoactive stimulant drugs—MDMA, amphetamine, and the new psychoactive substance (NPS) mephedrone—using liquid chromatography–high-resolution mass spectrometry from plasma samples in controlled administration studies of humans. Various metabolites were identified as increased or decreased based on drug intake, and mainly belonged to energy metabolism, steroid biosynthesis, or amino acids. Linoleic acid and pregnenolone sulfate changed similarly in response to intake of all drugs. Overall, the profile of mephedrone was more similar to that of amphetamine than that of MDMA. These data can provide the basis for further targeted metabolome studies on pharmacological actions and the search for biomarkers of drug use. View this paper
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Articles (36)

  • Review
  • Open Access
238 Citations
13,015 Views
30 Pages

18 August 2020

Arbuscular mycorrhizal fungi (AMF) is among the most ubiquitous plant mutualists that enhance plant growth and yield by facilitating the uptake of phosphorus and water. The countless interactions that occur in the rhizosphere between plants and its A...

(This article belongs to the Section Environmental Metabolomics)
  • Article
  • Open Access
7 Citations
3,948 Views
14 Pages

L-Ascorbate Biosynthesis Involves Carbon Skeleton Rearrangement in the Nematode Caenorhabditis elegans

  • Yukinori Yabuta,
  • Ryuta Nagata,
  • Yuka Aoki,
  • Ayumi Kariya,
  • Kousuke Wada,
  • Ayako Yanagimoto,
  • Hiroka Hara,
  • Tomohiro Bito,
  • Naho Okamoto and
  • Fumio Watanabe
  • + 2 authors

17 August 2020

Ascorbate (AsA) is required as a cofactor and is widely distributed in plants and animals. Recently, it has been suggested that the nematode Caenorhabditis elegans also synthesizes AsA. However, its biosynthetic pathway is still unknown. To further u...

  • Review
  • Open Access
15 Citations
4,030 Views
15 Pages

14 August 2020

While immunotherapies for diverse types of cancer are effective in many cases, relapse is still a lingering problem. Like tumor cells, activated immune cells have an anabolic metabolic profile, relying on glycolysis and the increased uptake and synth...

(This article belongs to the Special Issue Advances in Lipidomics: Biomedicine, Nutrients and Methodology)
  • Article
  • Open Access
5 Citations
3,808 Views
16 Pages

Metabolomics Comparison of Hanwoo (Bos taurus coreanae) Biofluids Using Proton Nuclear Magnetic Resonance Spectroscopy

  • Jun Sik Eom,
  • Shin Ja Lee,
  • Hyun Sang Kim,
  • You Young Choi,
  • Sang Ho Kim,
  • Yoo Gyung Lee and
  • Sung Sill Lee

14 August 2020

The aim of this study was to identify the metabolomic profiles of rumen fluid, serum, and urine from Hanwoo (Bos taurus coreanae), using proton nuclear magnetic resonance (1H-NMR) spectroscopy. In all, 189, 110, and 188 metabolites were identified in...

  • Article
  • Open Access
11 Citations
3,613 Views
19 Pages

Associations of BMI and Body Fat with Urine Metabolome in Adolescents Are Sex-Specific: A Cross-Sectional Study

  • Christian Brachem,
  • Julia Langenau,
  • Leonie Weinhold,
  • Matthias Schmid,
  • Ute Nöthlings and
  • Kolade Oluwagbemigun

13 August 2020

Epidemiologic studies examining the relationship between body composition and the urine metabolome may improve our understanding of the role of metabolic dysregulation in body composition-related health conditions. Previous studies, mostly in adult p...

  • Article
  • Open Access
26 Citations
4,844 Views
14 Pages

Antibiotics Effects on the Fecal Metabolome in Preterm Infants

  • Laura Patton,
  • Nan Li,
  • Timothy J. Garrett,
  • J. Lauren Ruoss,
  • Jordan T. Russell,
  • Diomel de la Cruz,
  • Catalina Bazacliu,
  • Richard A. Polin,
  • Eric W. Triplett and
  • Josef Neu

13 August 2020

Within a randomized prospective pilot study of preterm infants born at less than 33 weeks’ gestation, weekly fecal samples from 19 infants were collected and metabolomic analysis was performed. The objective was to evaluate for differences in f...

  • Article
  • Open Access
20 Citations
4,079 Views
13 Pages

Identification of Human Sulfotransferases Active towards Silymarin Flavonolignans and Taxifolin

  • Jiří Vrba,
  • Barbora Papoušková,
  • Pavel Kosina,
  • Kateřina Lněničková,
  • Kateřina Valentová and
  • Jitka Ulrichová

12 August 2020

Natural phenolic compounds are known to be metabolized by phase II metabolic reactions. In this study, we examined the in vitro sulfation of the main constituents of silymarin, an herbal remedy produced from the fruits of the milk thistle. The study...

(This article belongs to the Section Pharmacology and Drug Metabolism)
  • Article
  • Open Access
6 Citations
6,880 Views
24 Pages

Metabolic Profiling Reveals Aggravated Non-Alcoholic Steatohepatitis in High-Fat High-Cholesterol Diet-Fed Apolipoprotein E-Deficient Mice Lacking Ron Receptor Signaling

  • Joselyn N. Allen,
  • Adwitia Dey,
  • Jingwei Cai,
  • Jingtao Zhang,
  • Yuan Tian,
  • Mary Kennett,
  • Yanling Ma,
  • T. Jake Liang,
  • Andrew D. Patterson and
  • Pamela A. Hankey-Giblin

11 August 2020

Non-alcoholic steatohepatitis (NASH) represents the progressive sub-disease of non-alcoholic fatty liver disease that causes chronic liver injury initiated and sustained by steatosis and necroinflammation. The Ron receptor is a tyrosine kinase of the...

  • Article
  • Open Access
16 Citations
3,614 Views
16 Pages

VenoMS—A Website for the Low Molecular Mass Compounds in Spider Venoms

  • Yvonne M. Forster,
  • Silvan Reusser,
  • Florian Forster,
  • Stefan Bienz and
  • Laurent Bigler

11 August 2020

Spider venoms are highly complex mixtures. Numerous spider venom metabolites are uniquely found in spider venoms and are of interest concerning their potential use in pharmacology, agriculture, and cosmetics. A nontargeted ultra-high performance high...

  • Review
  • Open Access
30 Citations
5,180 Views
28 Pages

Metabolomics in Radiation Biodosimetry: Current Approaches and Advances

  • Merriline M. Satyamitra,
  • David R. Cassatt,
  • Brynn A. Hollingsworth,
  • Paul W. Price,
  • Carmen I. Rios,
  • Lanyn P. Taliaferro,
  • Thomas A. Winters and
  • Andrea L. DiCarlo

11 August 2020

Triage and medical intervention strategies for unanticipated exposure during a radiation incident benefit from the early, rapid and accurate assessment of dose level. Radiation exposure results in complex and persistent molecular and cellular respons...

(This article belongs to the Special Issue Metabolomics/Lipidomics in Radiation Research)
  • Article
  • Open Access
49 Citations
5,025 Views
14 Pages

Comparative Metabolomic Analysis of Dendrobium officinale under Different Cultivation Substrates

  • Si-Min Zuo,
  • Hai-Dong Yu,
  • Weimin Zhang,
  • Qiuping Zhong,
  • Wenxue Chen,
  • Weijun Chen,
  • Yong-Huan Yun and
  • Haiming Chen

10 August 2020

Dendrobium officinale, a precious herbal medicine, has been used for a long time in Chinese history. The metabolites of D. officinale, regarded as its effective components to fight diseases, are significantly affected by cultivation substrates. In th...

(This article belongs to the Special Issue Metabolomics in Plant Environmental Physiology)
  • Review
  • Open Access
29 Citations
9,841 Views
13 Pages

9 August 2020

In hyperammonemic states, such as liver cirrhosis, urea cycle disorders, and strenuous exercise, the catabolism of branched-chain amino acids (BCAAs; leucine, isoleucine, and valine) is activated and BCAA concentrations decrease. In these conditions,...

(This article belongs to the Section Nutrition and Metabolism)
  • Article
  • Open Access
42 Citations
4,212 Views
12 Pages

Metabolomic Signature of Amino Acids, Biogenic Amines and Lipids in Blood Serum of Patients with Severe Osteoarthritis

  • Kaspar Tootsi,
  • Kadri Vilba,
  • Aare Märtson,
  • Jaak Kals,
  • Kaido Paapstel and
  • Mihkel Zilmer

8 August 2020

Metabolomic analysis is an emerging new diagnostic tool, which holds great potential for improving the understanding of osteoarthritis (OA)-caused metabolomic shifts associated with systemic inflammation and oxidative stress. The main aim of the stud...

(This article belongs to the Section Endocrinology and Clinical Metabolic Research)
  • Article
  • Open Access
18 Citations
4,242 Views
13 Pages

Changes of Exhaled Volatile Organic Compounds in Postoperative Patients Undergoing Analgesic Treatment: A Prospective Observational Study

  • Benjamin Löser,
  • Alina Grabenschröer,
  • Giovanni Pugliese,
  • Pritam Sukul,
  • Phillip Trefz,
  • Jochen K Schubert and
  • Wolfram Miekisch

7 August 2020

Assessment and treatment of postoperative pain can be challenging as objective examination techniques to detect and quantify pain are lacking. We aimed to investigate changes of exhaled volatile organic compounds (VOCs) in patients with postoperative...

  • Article
  • Open Access
12 Citations
3,795 Views
15 Pages

Differential Metabolomics Profiles Identified by CE-TOFMS between High and Low Intramuscular Fat Amount in Fattening Pigs

  • Masaaki Taniguchi,
  • Aisaku Arakawa,
  • Motohide Nishio,
  • Toshihiro Okamura,
  • Chika Ohnishi,
  • Kouen Kadowaki,
  • Kimiko Kohira,
  • Fumika Homma,
  • Kazunori Matsumoto and
  • Kazuo Ishii

7 August 2020

The amount of intramuscular fat (IMF) present in the loin eye area is one of the most important characteristics of high-quality pork. IMF measurements are currently impractical without a labor-intensive process. Metabolomic profiling could be used as...

(This article belongs to the Special Issue Metabolomic Applications in Animal Science)
  • Article
  • Open Access
37 Citations
5,707 Views
11 Pages

Metabolic Profiles of Whole, Parotid and Submandibular/Sublingual Saliva

  • Marco Meleti,
  • Eleonora Quartieri,
  • Rita Antonelli,
  • Margherita E. Pezzi,
  • Benedetta Ghezzi,
  • Maria Vittoria Viani,
  • Giacomo Setti,
  • Emanuela Casali,
  • Elena Ferrari and
  • Thelma A. Pertinhez
  • + 2 authors

6 August 2020

The detection of salivary molecules associated with pathological and physiological alterations has encouraged the search of novel and non-invasive diagnostic biomarkers for oral health evaluation. While genomic, transcriptomic, and proteomic profiles...

  • Article
  • Open Access
14 Citations
4,300 Views
19 Pages

A Multilevel Bayesian Approach to Improve Effect Size Estimation in Regression Modeling of Metabolomics Data Utilizing Imputation with Uncertainty

  • Christopher E. Gillies,
  • Theodore S. Jennaro,
  • Michael A. Puskarich,
  • Ruchi Sharma,
  • Kevin R. Ward,
  • Xudong Fan,
  • Alan E. Jones and
  • Kathleen A. Stringer

6 August 2020

To ensure scientific reproducibility of metabolomics data, alternative statistical methods are needed. A paradigm shift away from the p-value toward an embracement of uncertainty and interval estimation of a metabolite’s true effect size may le...

(This article belongs to the Special Issue Development and Application of Statistical Methods for Analyzing Metabolomics Data)
  • Review
  • Open Access
96 Citations
15,709 Views
20 Pages

Promoter Architecture and Promoter Engineering in Saccharomyces cerevisiae

  • Hongting Tang,
  • Yanling Wu,
  • Jiliang Deng,
  • Nanzhu Chen,
  • Zhaohui Zheng,
  • Yongjun Wei,
  • Xiaozhou Luo and
  • Jay D. Keasling

6 August 2020

Promoters play an essential role in the regulation of gene expression for fine-tuning genetic circuits and metabolic pathways in Saccharomyces cerevisiae (S. cerevisiae). However, native promoters in S. cerevisiae have several limitations which hinde...

(This article belongs to the Special Issue Metabolic Engineering and Synthetic Biology Volume 2)
  • Article
  • Open Access
108 Citations
8,169 Views
18 Pages

Target Analysis of Volatile Organic Compounds in Exhaled Breath for Lung Cancer Discrimination from Other Pulmonary Diseases and Healthy Persons

  • Michalis Koureas,
  • Paraskevi Kirgou,
  • Grigoris Amoutzias,
  • Christos Hadjichristodoulou,
  • Konstantinos Gourgoulianis and
  • Andreas Tsakalof

3 August 2020

The aim of the present study was to investigate the ability of breath analysis to distinguish lung cancer (LC) patients from patients with other respiratory diseases and healthy people. The population sample consisted of 51 patients with confirmed LC...

(This article belongs to the Section Advances in Metabolomics)
  • Review
  • Open Access
96 Citations
12,280 Views
19 Pages

Heat stress is one of the main threats to dairy cow production; in order to resist heat stress, the animal exhibits a variety of physiological and hormonal responses driven by complex molecular mechanisms. Heat-stressed cows have high insulin activit...

  • Article
  • Open Access
26 Citations
4,980 Views
17 Pages

An Integrated Metabolomics Study of Glucosinolate Metabolism in Different Brassicaceae Genera

  • Yu Liu,
  • Merja Rossi,
  • Xu Liang,
  • Hui Zhang,
  • Li Zou and
  • Choon Nam Ong

Glucosinolates are a group of plant secondary metabolites that can be hydrolyzed into a variety of breakdown products such as isothiocyanates, thiocyanates, and nitriles. These breakdown products can facilitate plant defense and function as attractan...

(This article belongs to the Special Issue Metabolites and Signaling Pathways)
  • Review
  • Open Access
49 Citations
9,800 Views
28 Pages

Metabolomic Biomarkers for Detection, Prognosis and Identifying Recurrence in Endometrial Cancer

  • Kelechi Njoku,
  • Caroline J.J Sutton,
  • Anthony D. Whetton and
  • Emma J. Crosbie

Metabolic reprogramming is increasingly recognised as one of the defining hallmarks of tumorigenesis. There is compelling evidence to suggest that endometrial cancer develops and progresses in the context of profound metabolic dysfunction. Whilst the...

  • Article
  • Open Access
10 Citations
4,127 Views
23 Pages

Metabolite Profiles of the Relationship between Body Mass Index (BMI) Milestones and Metabolic Risk during Early Adolescence

  • Wei Perng,
  • Mohammad L. Rahman,
  • Izzuddin M. Aris,
  • Gregory Michelotti,
  • Joanne E. Sordillo,
  • Jorge E. Chavarro,
  • Emily Oken and
  • Marie-France Hivert

Early growth is associated with future metabolic risk; however, little is known of the underlying biological pathways. In this prospective study of 249 boys and 227 girls, we sought to identify sex-specific metabolite profiles that mark the relations...

(This article belongs to the Special Issue Sex and Gender Differences in Metabolism)
  • Article
  • Open Access
44 Citations
4,681 Views
11 Pages

Plasma Metabolites Associate with All-Cause Mortality in Individuals with Type 2 Diabetes

  • Filip Ottosson,
  • Einar Smith,
  • Céline Fernandez and
  • Olle Melander

Alterations in the human metabolome occur years before clinical manifestation of type 2 diabetes (T2DM). By contrast, there is little knowledge of how metabolite alterations in individuals with diabetes relate to risk of diabetes complications and pr...

(This article belongs to the Section Endocrinology and Clinical Metabolic Research)
  • Article
  • Open Access
1 Citations
3,815 Views
19 Pages

Abiotic stresses are major factors that negatively affect plant growth and productivity. Plants have developed complex strategies to ensure their survival and reproduction under adverse conditions, activating mechanisms that involve changes at differ...

(This article belongs to the Special Issue Phenolic Compounds and Metabolome)
  • Article
  • Open Access
12 Citations
4,344 Views
13 Pages

Multiblock Analysis to Relate Polyphenol Targeted Mass Spectrometry and Sensory Properties of Chocolates and Cocoa Beans

  • Noémie Fayeulle,
  • Sébastien Preys,
  • Jean-Michel Roger,
  • Renaud Boulanger,
  • Clotilde Hue,
  • Véronique Cheynier and
  • Nicolas Sommerer

Chocolate quality is largely due to the presence of polyphenols and especially of flavan-3-ols and their derivatives that contribute to bitterness and astringency. The aim of the present work was to assess the potential of a quantitative polyphenol t...

(This article belongs to the Special Issue Phenolic Compounds and Metabolome)
  • Article
  • Open Access
7 Citations
3,628 Views
14 Pages

Evolution of Inflammatory and Oxidative Stress Markers in Romanian Obese Male Patients with Type 2 Diabetes Mellitus after Laparoscopic Sleeve Gastrectomy: One Year Follow-Up

  • Ariana Picu,
  • Laura Petcu,
  • Diana Simona Ştefan,
  • Grațiela Grădișteanu Pîrcălăbioru,
  • Manuela Mitu,
  • Daiana Bajko,
  • Daniela Lixandru,
  • Cristian Guja,
  • Octavian Savu and
  • Constantin Ionescu-Tîrgovişte
  • + 6 authors

Geography is one of the key drivers of the significant variation in the etiopathogenic profile and prevalence of type 2 diabetes mellitus (T2DM) and obesity, therefore geographically based data are fundamental for implementing the appropriate interve...

(This article belongs to the Special Issue Cardiometabolic Challenges-Present and Future)
  • Article
  • Open Access
11 Citations
3,913 Views
14 Pages

Preparative separation of three lycorine type alkaloids from Rhodolirum speciosum (Amaryllidaceae) was successfully carried out using pH-zone-refinement centrifugal partition chromatography (CPC) using the solvent system methyl-tert-butyl ether/aceto...

(This article belongs to the Special Issue Plant and Derived Natural Product Metabolomics)
  • Article
  • Open Access
31 Citations
7,264 Views
20 Pages

Comparative Untargeted Metabolomics Analysis of the Psychostimulants 3,4-Methylenedioxy-Methamphetamine (MDMA), Amphetamine, and the Novel Psychoactive Substance Mephedrone after Controlled Drug Administration to Humans

  • Andrea E. Steuer,
  • Daria Kaelin,
  • Martina I. Boxler,
  • Lisa Eisenbeiss,
  • Friederike Holze,
  • Patrick Vizeli,
  • Joanna Czerwinska,
  • Paul I. Dargan,
  • Vincenzo Abbate and
  • Thomas Kraemer
  • + 1 author

Psychoactive stimulants are a popular drug class which are used recreationally. Over the last decade, large numbers of new psychoactive substances (NPS) have entered the drug market and these pose a worldwide problem to human health. Metabolomics app...

(This article belongs to the Special Issue New Psychoactive Substances - Metabolism and Metabolomics)
  • Article
  • Open Access
9 Citations
4,875 Views
25 Pages

Profiling of Metabolomic Changes in Plasma and Urine of Pigs Caused by Illegal Administration of Testosterone Esters

  • Kamil Stastny,
  • Kristina Putecova,
  • Lenka Leva,
  • Milan Franek,
  • Petr Dvorak and
  • Martin Faldyna

The use of anabolic steroid hormones as growth promoters in feed for farm animals has been banned in the European Union since 1988 on the basis of Council Directive 96/22/EC. However, there is still ongoing monitoring and reporting of positive findin...

(This article belongs to the Special Issue Metabolomic Applications in Animal Science)
  • Article
  • Open Access
7 Citations
3,710 Views
15 Pages

Intake of probiotic cheese improves the intestinal health of humans and animals. However, metabolic changes in the intestines of dogs in response to the ingestion of probiotic cheese have not been evaluated. Thus, we aimed to determine the metabolic...

  • Review
  • Open Access
10 Citations
4,992 Views
15 Pages

The mevalonate pathway produces cholesterol and other compounds crucial for numerous cellular processes. It is well known that age and sex modulate this pathway in the liver. Recently, similar effects were also noted in different brain areas, suggest...

(This article belongs to the Special Issue Sex and Gender Differences in Metabolism)
  • Review
  • Open Access
66 Citations
9,622 Views
27 Pages

Metabolic Modelling as a Framework for Metabolomics Data Integration and Analysis

  • Svetlana Volkova,
  • Marta R. A. Matos,
  • Matthias Mattanovich and
  • Igor Marín de Mas

Metabolic networks are regulated to ensure the dynamic adaptation of biochemical reaction fluxes to maintain cell homeostasis and optimal metabolic fitness in response to endogenous and exogenous perturbations. To this end, metabolism is tightly cont...

(This article belongs to the Special Issue Animal and Cellular Models in Metabolomics Research)
  • Review
  • Open Access
45 Citations
7,035 Views
24 Pages

Corn (Zea mays L.) is an important cereal crop indigenous to the Americas, where its genetic biodiversity is still preserved, especially among native populations from Mesoamerica and South America. The use of metabolomics in corn has mainly focused o...

(This article belongs to the Section Plant Metabolism)
  • Article
  • Open Access
16 Citations
4,350 Views
19 Pages

Comprehensive Vitamer Profiling of Folate Mono- and Polyglutamates in Baker’s Yeast (Saccharomyces cerevisiae) as a Function of Different Sample Preparation Procedures

  • Lena Gmelch,
  • Daniela Wirtz,
  • Michael Witting,
  • Nadine Weber,
  • Lisa Striegel,
  • Philippe Schmitt-Kopplin and
  • Michael Rychlik

Folates are a group of B9 vitamins playing an important role in many metabolic processes such as methylation reactions, nucleotide synthesis or oxidation and reduction processes. However, humans are not able to synthesize folates de novo and thus rel...

  • Article
  • Open Access
14 Citations
3,615 Views
12 Pages

Metabolic Profiling Reveals Significant Perturbations of Intracellular Glucose Homeostasis in Enterovirus-Infected Cells

  • Zijiao Zou,
  • Jessica Oi-Ling Tsang,
  • Bingpeng Yan,
  • Kenn Ka-Heng Chik,
  • Chris Chun-Yiu Chan,
  • Jianli Cao,
  • Ronghui Liang,
  • Kaiming Tang,
  • Feifei Yin and
  • Kwok-Yung Yuen
  • + 4 authors

Enterovirus A71 (EV-A71) is a common cause of hand, foot, and mouth disease. Severe EV-A71 infections may be associated with life-threatening neurological complications. However, the pathogenic mechanisms underlying these severe clinical and patholog...

(This article belongs to the Special Issue Metabolomics in Human Tissues and Materials)
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Metabolites - ISSN 2218-1989