Journal Description
Fishes
Fishes
is an international, peer-reviewed, scientific, open access journal published monthly online by MDPI. It covers fishes and aquatic animals research. The Iberian Society of Ichthyology (SIBIC) and the Brazilian Society of Aquaculture and Aquatic Biology (Aquabio) are affiliated with Fishes and their members receive a discount on the article processing charges.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubAg, FSTA, and other databases.
- Journal Rank: JCR - Q2 (Marine & Freshwater Biology)
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 15.7 days after submission; acceptance to publication is undertaken in 2.8 days (median values for papers published in this journal in the second half of 2023).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
- Testimonials: See what our editors and authors say about Fishes.
Impact Factor:
2.3 (2022);
5-Year Impact Factor:
2.4 (2022)
Latest Articles
Analysis of Driving Factors for Fluctuations in China’s Tuna Product Exports from 2002 to 2022
Fishes 2024, 9(5), 156; https://doi.org/10.3390/fishes9050156 (registering DOI) - 26 Apr 2024
Abstract
Tuna products are among the most popular seafoods in the world and widely traded across the globe. China is a major contributor to the worldwide tuna industry as both a producer and an exporter. Employing the Constant Market Share model, this study examines
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Tuna products are among the most popular seafoods in the world and widely traded across the globe. China is a major contributor to the worldwide tuna industry as both a producer and an exporter. Employing the Constant Market Share model, this study examines the factors influencing the variations in China’s tuna exports from 2002 to 2022, focusing on global, country, and product type levels. Results show that (1) China’s expanded tuna exporting trade is partially due to the rising worldwide demand for tuna, which is mostly prominent in China’s tuna exports to the USA, Vietnam, and Malaysia, as well as its exports of frozen tuna products. (2) China’s competitive edge in tuna exports has steadily strengthened in most of its principal exporting markets, especially in Japan and the fresh tuna markets. Nevertheless, the competitiveness structure of Chinese tuna exports has challenges in satisfying the diverse requirements of different nations (regions) for various types of tuna products. (3) The second-order effect has been the primary driver of the expansion in Chinese tuna exports, with its contribution rate consistently rising in recent years. In response to the changes in international and domestic tuna markets, China must implement strategies to maximize the potential of the tuna importing market, further improve its global competitiveness, enhance communication and coordination among domestic and international tuna stakeholders, and cultivate domestic tuna markets.
Full article
(This article belongs to the Special Issue Green Growth and Sustainable Development in Fishery and Aquaculture)
Open AccessArticle
Dynamic Changes of Environment and Gut Microbial Community of Litopenaeus vannamei in Greenhouse Farming and Potential Mechanism of Gut Microbial Community Construction
by
Hui Li, Shuwen Gu, Libao Wang, Wenjun Shi, Qi Jiang and Xihe Wan
Fishes 2024, 9(5), 155; https://doi.org/10.3390/fishes9050155 - 26 Apr 2024
Abstract
The aim of this study was to investigate the dynamic changes in the microbial communities of both the environment and gut of Litopenaeus vannamei, as well as to elucidate the mechanisms underlying microbial community assembly in greenhouse farming. 16S rDNA high-throughput sequencing
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The aim of this study was to investigate the dynamic changes in the microbial communities of both the environment and gut of Litopenaeus vannamei, as well as to elucidate the mechanisms underlying microbial community assembly in greenhouse farming. 16S rDNA high-throughput sequencing and bioinformatics methods were used to carry out the research on the community structure of the microorganisms under greenhouse culture conditions in water, sediment, and gut microorganisms; correlations pertaining to environmental factors; the feasibility of using Source Tracker; and the mechanisms of community construction. The results show that the dominant microorganisms in water, sediment, and gut farming in a greenhouse environment varied and were subject to dynamic change. A variety of beneficial microbiota such as Bacillus were found in the gut, whereas a variety of microorganisms such as Marivita and Pseudomonas, which function as nitrogen and phosphorus removers, were present in water. Source Tracker and environmental correlation analyses showed that changes in the gut were associated with eutrophication indicators (total nitrogen, total phosphorus, ammonia nitrogen) and changes in environmental microorganisms (in water and sediment). The results of the community-building mechanism analysis show that stochastic processes determine the community-building directions of environmental and gut microorganisms. These findings will help us to understand the microbiota characteristics of shrimp ponds under greenhouse farming conditions, and the complex interactions between the shrimp gut and the environmental microbiota and environmental variables, as well as revealing the changing rules of the gut microbiota.
Full article
(This article belongs to the Special Issue Aquaculture Ecology and the Environmental Microbiome)
Open AccessArticle
Hauling Snow Crab Traps in Eastern Canada: A Study Documenting Tension in Ropes
by
Genevieve Peck, Tomas Araya-Schmidt and Paul D. Winger
Fishes 2024, 9(5), 154; https://doi.org/10.3390/fishes9050154 - 26 Apr 2024
Abstract
Entanglement in commercial fishing gear is one of the main factors inhibiting the recovery of critically endangered North Atlantic right whales. Installing low-breaking-strength (LBS) components in the buoy lines and main lines of stationary fishing gear may be a viable solution for some
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Entanglement in commercial fishing gear is one of the main factors inhibiting the recovery of critically endangered North Atlantic right whales. Installing low-breaking-strength (LBS) components in the buoy lines and main lines of stationary fishing gear may be a viable solution for some fisheries. But is it an effective solution for deep-water trap fisheries? This study quantified in-line rope tensions observed during fishing operations for snow crab (Chionoecetes opilio) in Newfoundland and Labrador, Canada. We conducted a controlled fishing experiment in which we documented the loads experienced while hauling fleets of traps. The results showed that several factors contributed to the loads observed, including the components of the traps, the presence of crabs, and environmental conditions such as wind direction and wave height. According to the statistical models, the maximum tension from the estimated marginal means was 477.53 kgf in the buoy line and 987.99 kgf in the main line for the baited hauls, which exceeds the safe working load (154 kgf) of the proposed low-breaking-strength components. Our results suggest that LBS components are not a viable solution for this deep-water fishery.
Full article
(This article belongs to the Special Issue Advances in Crab Fisheries)
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Open AccessArticle
Population Structure Using Mitochondrial DNA for the Conservation of Liobagrus geumgangensis (Siluriformes: Amblycipitidae), an Endemic Freshwater Fish in Korea
by
Kang-Rae Kim, Mu-Sung Sung and Keun-Sik Kim
Fishes 2024, 9(5), 153; https://doi.org/10.3390/fishes9050153 - 25 Apr 2024
Abstract
Liobagrus geumgangensis is a novel Korean fish species endemic to the Geumgang and Mangyeonggang River basins on the Korean Peninsula. During a survey of L. geumgangensis, the discovery of Liobagrus mediadiposalis as a potential threat prompted an investigation into L. geumgangensis genetic
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Liobagrus geumgangensis is a novel Korean fish species endemic to the Geumgang and Mangyeonggang River basins on the Korean Peninsula. During a survey of L. geumgangensis, the discovery of Liobagrus mediadiposalis as a potential threat prompted an investigation into L. geumgangensis genetic diversity and structure. Three populations of L. geumagangensis and one population of L. mediadiposalis were investigated using a 1024-bp sequence in the cytb region of mitochondrial DNA. The Mangyeonggang River of L. geumagangensis displayed the lowest haplotype diversity (Hd) within a range of 0.000–0.337, with one to two haplotypes (h). The Jecheon region of the Geumgang River for L. geumagangensis population had the highest nucleotide diversity (π) and was within the range of 0.00000–0.00066. The h of L. mediadiposalis population was 3, the range of Hd was 0.292, and π was 0.00231. Tajima’s D (D) and Fu’s Fs (F) were negative and non-significant in the LgGJ population. The genetic structure of L. geumgangensis had no shared haplotypes among the three populations. The discovery of L. mediadiposalis in the Geumgang River suggests the necessity of non-habitat conservation and population management of fish farms to conserve L. geumgangensis.
Full article
(This article belongs to the Section Genetics and Biotechnology)
Open AccessArticle
Age, Growth, and Otolith Morphometrics of Trachinus draco (L., 1758) and Trachinus radiatus (Cuvier, 1829) in the Eastern Mediterranean
by
Vasiliki Nikiforidou, Chryssi Mytilineou, Athanasios Alexandropoulos and Aikaterini Anastasopoulou
Fishes 2024, 9(5), 152; https://doi.org/10.3390/fishes9050152 - 25 Apr 2024
Abstract
Trachinus draco and Trachinus radiatus are two bycatch species of low commercial value and no sufficient knowledge on their biological features. In the present study, the weight–length relationship, age, growth, and ten otolith morphometric variables of these species were investigated in the southwestern
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Trachinus draco and Trachinus radiatus are two bycatch species of low commercial value and no sufficient knowledge on their biological features. In the present study, the weight–length relationship, age, growth, and ten otolith morphometric variables of these species were investigated in the southwestern Aegean Sea for the first time. Positive allometric and isometric growth in the weight were defined in T. draco and T. radiatus. The weight–length relationship was described by the parameters α = 0.002415 and b = 3.35745 in T. draco and α = 0.007582 and b = 3.09452 in T. radiatus. The von Bertalanffy growth function parameters were L∞ = 44.51 cm, k = 0.15 year−1, and t0 = −1.31 years for T. draco and L∞ = 58.47 cm, k = 0.16 year−1, and t0 = −0.78 years for T. radiatus. Ten otolith variables (radius, length, width, area, perimeter, roundness, circularity, form factor, rectangularity, and ellipticity) showed a significant relationship with size for both species, except the ellipticity in T. radiatus. The mean values of all the otolith variables were higher in T. radiatus than in T. draco. The otolith of T. radiatus was found to become more rectangular with size as compared to the otolith of T. radiatus. The results of this work can support further research on the behavioral and ecological features of the two species.
Full article
(This article belongs to the Section Biology and Ecology)
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Open AccessArticle
Triple Attention Mechanism with YOLOv5s for Fish Detection
by
Wei Long, Yawen Wang, Lingxi Hu, Jintao Zhang, Chen Zhang, Linhua Jiang and Lihong Xu
Fishes 2024, 9(5), 151; https://doi.org/10.3390/fishes9050151 - 23 Apr 2024
Abstract
Traditional fish farming methods suffer from backward production, low efficiency, low yield, and environmental pollution. As a result of thorough research using deep learning technology, the industrial aquaculture model has experienced gradual maturation. A variety of complex factors makes it difficult to extract
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Traditional fish farming methods suffer from backward production, low efficiency, low yield, and environmental pollution. As a result of thorough research using deep learning technology, the industrial aquaculture model has experienced gradual maturation. A variety of complex factors makes it difficult to extract effective features, which results in less-than-good model performance. This paper proposes a fish detection method that combines a triple attention mechanism with a You Only Look Once (TAM-YOLO)model. In order to enhance the speed of model training, the process of data encapsulation incorporates positive sample matching. An exponential moving average (EMA) is incorporated into the training process to make the model more robust, and coordinate attention (CA) and a convolutional block attention module are integrated into the YOLOv5s backbone to enhance the feature extraction of channels and spatial locations. The extracted feature maps are input to the PANet path aggregation network, and the underlying information is stacked with the feature maps. The method improves the detection accuracy of underwater blurred and distorted fish images. Experimental results show that the proposed TAM-YOLO model outperforms YOLOv3, YOLOv4, YOLOv5s, YOLOv5m, and SSD, with a mAP value of 95.88%, thus providing a new strategy for fish detection.
Full article
(This article belongs to the Special Issue Construction and Application of Big Data Platform and Model for the Detection and Warning of Aquatic Diseases)
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Open AccessArticle
Enhancing Indoor Culture of Weather Loach (Misgurnus anguillicaudatus) and Caipira Lettuce (Lactuca sativa) in a Decoupled FLOCponics System
by
Junseong Park, Ju-ae Hwang, Jongryeol Choe, Donggil Lee and Hyeongsu Kim
Fishes 2024, 9(5), 150; https://doi.org/10.3390/fishes9050150 - 23 Apr 2024
Abstract
Interest in aquaponics (AP) is increasing due to its ability to minimize sewage and maximize feed efficiency in fish farming. However, owing to limitations of intensive cultures and a lack of nutrients such as NO3 for growing crops, AP requires the use
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Interest in aquaponics (AP) is increasing due to its ability to minimize sewage and maximize feed efficiency in fish farming. However, owing to limitations of intensive cultures and a lack of nutrients such as NO3 for growing crops, AP requires the use of artificial nutrients. Therefore, novel approaches are required to develop AP-intensive culturing methods. An AP system based on biofloc technology (BFT) called FLOCponics (FP) has been recommended. Here, the productivity of the weather loach (Misgurnus anguillicaudatus) in the FP system, BFT system, and flow-through systems (FTSs), as well as these systems’ effect on Caipira lettuce (Lactuca sativa) growth, was analyzed. To compare crop productivity, a hydroponic (HP) bed was installed. The growth rate of M. anguillicaudatus showed significant differences, at 51.1 ± 3.69% in the FP system, followed by 24.0 ± 4.16% in the BFT system and −14.3 ± 1.4% in the FTS. Its survival rates were better in the FP system (91.1 ± 2.64%) than in the BFT system (82.1 ± 10.98%) or the FTS (66.8 ± 2.75%) (p < 0.05). Total ammonia nitrogen and NO2−-N concentrations were stabilized in every plot during the experimental period. However, the NO3−-N concentration continuously increased in the BFT system but decreased in the FP system and was maintained. The shoot weight of the Caipira lettuce was 163.6 ± 8.65 g in the FP system and 149.6 ± 9.05 g in the HP system. In conclusion, FP system can provide a large amount of nutrients and improve the growth performance of both fish and crops in the FP system.
Full article
(This article belongs to the Special Issue Advances in Sustainable Aquaculture Production Systems)
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Open AccessArticle
A Fish-Based Tool for the Quality Assessment of Portuguese Large Rivers
by
António Tovar Faro, Maria Teresa Ferreira and João Manuel Oliveira
Fishes 2024, 9(5), 149; https://doi.org/10.3390/fishes9050149 - 23 Apr 2024
Abstract
Multimetric indices play a pivotal role in assessing river ecological quality, aligning with the European Water Framework Directive (EU WFD) requirements. However, indices developed specifically for large rivers are uncommon. Our objective was to develop a fish-based tool specifically tailored to assess the
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Multimetric indices play a pivotal role in assessing river ecological quality, aligning with the European Water Framework Directive (EU WFD) requirements. However, indices developed specifically for large rivers are uncommon. Our objective was to develop a fish-based tool specifically tailored to assess the ecological quality in Portuguese large rivers. Data were collected from seven sites in each of three Portuguese large rivers (Minho, Guadiana, and Tagus). Each site was classified using an environmental disturbance score, combining different pressure types, such as water chemistry, land use, and hydromorphological alterations. The Fish-based Multimetric Index for Portuguese Large Rivers (F-MMIP-LR) comprises four metrics: % native lithophilic individuals; % alien individuals; % migrant individuals; and % freshwater native individuals, representing compositional, reproductive, and migratory guilds. The index showed good performance in separating least- and most-disturbed sites. Least-disturbed sites were rated ‘high’ or ‘good’ by F-MMIP-LR, contrasting with no such classification for most-disturbed sites, highlighting index robustness. The three rivers presented a wide range of F-MMIP-LR values across the gradient of ‘bad’ to ‘high’, indicating that, on a large spatial extent, the biological condition was substantially altered. The F-MMIP-LR provides vital information for managers and decision-makers, guiding restoration efforts and strengthening conservation initiatives in line with the WFD.
Full article
(This article belongs to the Special Issue Biomonitoring and Conservation of Freshwater & Marine Fishes)
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Open AccessArticle
Assessing Prospects of Integrating Asian Carp Polyculture in Europe: A Nature-Based Solution under Climate Change?
by
Oksana Nekrasova, Mihails Pupins, Volodymyr Tytar, Leonid Fedorenko, Oleksandr Potrokhov, Arturs Škute, Andris Čeirāns, Kathrin Theissinger and Jean-Yves Georges
Fishes 2024, 9(4), 148; https://doi.org/10.3390/fishes9040148 - 22 Apr 2024
Abstract
Aquaculture’s role in addressing food security has grown, with a spotlight on Asian carp species. Polyculture, i.e. cultivating multiple fish species in a single system, is being increasingly adopted for its resource efficiency and economic benefits. This practice for Asian fish for food
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Aquaculture’s role in addressing food security has grown, with a spotlight on Asian carp species. Polyculture, i.e. cultivating multiple fish species in a single system, is being increasingly adopted for its resource efficiency and economic benefits. This practice for Asian fish for food and ornamental purposes is gaining traction in Europe despite their invasive potential. Rising temperatures due to climate change offer an opportunity for thermophilic Asian carps (Hypophthalmichthys molitrix and Aristichthys nobilis). Using GIS modeling (Maxent), we identified the possible settlement of Asian carp in Northern Europe amidst climate change. We analyzed carp global distribution centers, assessed the potential carp spread in Europe, and evaluated their potential suitability for polyculture systems. By 2050, H. molitrix may extend its range to 58–62° N latitude, with a potential 1.7-fold habitat increase, while A. nobilis, which are more heat-tolerant, may move north to 52–58° N latitude, with a 1.3-fold potential increase. Despite the slight ecological differences in their native habitats, niche modeling indicates that these carp can occupy similar niches in Europe (proven statistically). The eventuality of using Asian species for polyculture in Europe presents both opportunities and challenges in the face of a changing climate as long as invasion risks are prevented. Envisaging such polyculture, yet very carefully for the protection of ecosystems, can help food security.
Full article
(This article belongs to the Special Issue Biodiversity and Spatial Distribution of Fishes)
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Open AccessArticle
Environmental DNA Characterization of the Fish Species Composition in the Mukawa River and Adjacent Habitats
by
Hyojin Ahn and Michael J. Miller
Fishes 2024, 9(4), 147; https://doi.org/10.3390/fishes9040147 - 21 Apr 2024
Abstract
The diverse freshwater fish fauna of the Japanese archipelago is distributed among four main island landmasses, which include Hokkaido in the north, with many diadromous species. One relatively well-preserved river drainage along the southern coast of Central Hokkaido is the Mukawa River. Fish
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The diverse freshwater fish fauna of the Japanese archipelago is distributed among four main island landmasses, which include Hokkaido in the north, with many diadromous species. One relatively well-preserved river drainage along the southern coast of Central Hokkaido is the Mukawa River. Fish fauna surveys in the Mukawa River were mostly in downstream areas and the fish diversity is not well-documented among the upper, lower river, and coastal environments. Fish communities in the river, estuary, and sea were sampled using eDNA analysis to evaluate upstream and downstream species detections, and tidal and spatial detection variation near the river mouth. The number of species was higher at the river mouth and nearshore sites compared to the river and offshore. Fish detections reflected life history categories (freshwater resident, diadromous, brackish, or marine) and the environments. Similarity analysis showed that fish species compositions were divided into (1) upstream and midstream, (2) downstream and river mouth, (3) adjacent shore, and (4) offshore. Salmonid, cyprinid, loach, and sculpin species were detected in the river, compared to a mixture of species downstream and along the coast. This rapid assessment type study demonstrated that eDNA survey methodology would be effective for multiple river comparative surveys, seasonality studies, or evaluating possible effects of cross-river weirs or dams.
Full article
(This article belongs to the Section Biology and Ecology)
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Open AccessReview
Safety, Processing, and Utilization of Fishery Products
by
Upali Samarajeewa
Fishes 2024, 9(4), 146; https://doi.org/10.3390/fishes9040146 - 21 Apr 2024
Abstract
Global marine fish harvests have reached a plateau over the last decade, and efforts to increase aquaculture tend to face limitations in terms of water resources and contamination problems. Of the current fish harvest, at least 50% is discarded as waste. The current
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Global marine fish harvests have reached a plateau over the last decade, and efforts to increase aquaculture tend to face limitations in terms of water resources and contamination problems. Of the current fish harvest, at least 50% is discarded as waste. The current situation requires efforts to process, preserve, and utilize the fish capture to minimize waste. Chemical and microbiological contamination limit the utilization of harvested fish. There is a need to improve fish preservation to minimize spoilage and to process them into more appealing products. Instead of resorting to individual food-processing methods, the efficiency of processing could best be increased by a combination of conventional and modern processing methods or by combinations of modern processing methods. Fish waste is a rich source of oils containing essential fatty acids, polypeptides, and amino polysaccharides that could be utilized through the upscaling of current scientifically proven methods to new processing technologies. The separation of collagens, gelatins, bioactive peptides, edible fish oils, and chitosan form the primary stages in the utilization of fish waste. The products need purification to meet food quality and safety standards and to have desirable industrial characteristics. The diversity of information and products generated through new methods require advanced data handling and prediction systems, such as artificial intelligence, to address food safety and to derive the best out of fish processing and utilization.
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(This article belongs to the Section Processing and Comprehensive Utilization of Fishery Products)
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Biochemical Composition of Eggs, Larvae and Tissues of Macrobrachium tenellum Females Fed Diets with Different Lipid and Protein Levels
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Omar Alejandro Peña-Almaraz, Manuel Alejandro Vargas-Ceballos, Edilmar Cortés-Jacinto and Fernando Vega-Villasante
Fishes 2024, 9(4), 145; https://doi.org/10.3390/fishes9040145 - 21 Apr 2024
Abstract
One way to approach the nutritional requirements of native shrimp, necessary to consolidate their culture, is to know their biochemical composition. The effect of feeding two levels of lipids (4 and 12% L) and four levels of proteins (30, 35, 40 and 45%
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One way to approach the nutritional requirements of native shrimp, necessary to consolidate their culture, is to know their biochemical composition. The effect of feeding two levels of lipids (4 and 12% L) and four levels of proteins (30, 35, 40 and 45% P) in M. tenellum females was evaluated with respect to the biochemical composition of their eggs (EG), larvae (LR), gonad (GO) and hepatopancreas (HP). Total protein (TP), total carbohydrate (TC) and total lipid (TL) were estimated. In EG, L and P levels influence TP and TL; TP increases in diets higher than P35. In LR, there are no differences (p > 0.05) in TP and in TL, only diets L4P40 and L12P30 were different (p < 0.05). In GO, there is no trend in TP differences; in TC there was variation in the range of the data and TL was higher in L4P30 and L4P35. In HP, the diets with L4 obtained the highest TP values (p < 0.05); the L12 diets were higher in TL (p < 0.05). In general, diets with an inclusion of L12 showed the highest TP, TC and TL means, within this lipid level the P30 diet stood out; therefore, it is recommended to use a diet with L12P30 in the formulation of balanced feed for the species.
Full article
(This article belongs to the Special Issue Nutrition, Physiology and Metabolism of Crustaceans)
Open AccessArticle
Comparison of Bacterial Community Composition in Gut of Chinese Mitten Crabs from Three Distinct Rivers in Korea
by
Hyung-Eun An, Adeel Malik, Jeongho Lee, Min-Ho Mun, Kang Hyun Lee, Hah Young Yoo and Chang-Bae Kim
Fishes 2024, 9(4), 144; https://doi.org/10.3390/fishes9040144 - 20 Apr 2024
Abstract
The Chinese mitten crab (CMC) also known as Eriocheir sinensis has great significance in the aquaculture industry. The bacterial communities inhabiting the CMC’s gut may differ depending on the host habitat and can aid in their normal biological functioning. These microbes are also
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The Chinese mitten crab (CMC) also known as Eriocheir sinensis has great significance in the aquaculture industry. The bacterial communities inhabiting the CMC’s gut may differ depending on the host habitat and can aid in their normal biological functioning. These microbes are also known to have certain effects on their flavor. In this study, we utilized MiSeq high-throughput sequencing technology to explore the diversity of bacterial communities in the gut of CMCs from three different geographical locations in Korea: the Geum (GD), Han (HD), and Tamjin (TD) rivers. Although most of the environmental parameters were similar at the three sites, significant differences in conductivity (CDS), dissolved oxygen (DO), and salinity were observed. The results show that CMCs sampled from these locations exhibited distinct microbial composition and abundance. For example, the genus Candidatus Hepatoplasma displayed significantly higher abundance in CMCs from HD than those in the other locations, suggesting nutritional stress. Similarly, the crabs collected from TD showed a higher abundance of pathogenic Helicobacter than those from HD and GD sites. We also observed differences in the amino acid, nucleotide, and lactic acid concentrations between different tissues such as the muscle, hepatopancreas, and testis of CMCs. However, only small differences were observed when these characteristics were compared in CMCs from different locations. Our results offer important insights into the intestinal bacterial composition in CMCs which in turn may help in designing better culturing strategies for these important species of crabs.
Full article
(This article belongs to the Special Issue Aquaculture Ecology and the Environmental Microbiome)
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Open AccessArticle
Health Insights from Nematode Larval Characterization in Greater Lizardfish, Saurida tumbil (Bloch, 1795) (Teleostei, Synodontidae)
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Younes Ghahvei, Mohammad Mirzaei, Shahrzad Azizi, Shadi Hashemnia and Shokoofeh Shamsi
Fishes 2024, 9(4), 143; https://doi.org/10.3390/fishes9040143 - 20 Apr 2024
Abstract
Fish health is of significant ecological and economic importance. In response to public observations of parasite-like structures in a popular edible fish, this study aimed to characterize nematode larvae commonly found in the muscle and body cavity of Saurida tumbil (Bloch, 1795),
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Fish health is of significant ecological and economic importance. In response to public observations of parasite-like structures in a popular edible fish, this study aimed to characterize nematode larvae commonly found in the muscle and body cavity of Saurida tumbil (Bloch, 1795), a commercially important fish species inhabiting the Persian Gulf and Oman Sea. This fish, locally known as Hasoom, holds substantial culinary importance, being a staple in the diets of millions residing in countries around the Persian Gulf. A total of 458 Saurida tumbil specimens were obtained from fish markets between June 2022 and May 2023. Subsequent examination revealed the presence of a total of 6132 nematode larvae. Nematodes found in the body cavity were identified as belonging to the genus Hysterothylacium sp., family Raphidascarididae, while those in the muscle were identified as Anisakis sp. larval type, family Anisakidae. Histopathology results suggested that these parasites may have adverse health impacts on their fish host. Notably, both nematode genera were found in the third larval stage, which is known to be the infective stage for anisakidosis. Given the reported cases of anisakidosis among people living in the study region, it is strongly recommended that fish be properly cooked before consumption to mitigate health risks.
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(This article belongs to the Section Fish Pathology and Parasitology)
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Open AccessArticle
Using qPCR to Identify Potential Effects of Thermal Conditions during Embryogenesis on Mitochondrial DNA Copy Number in Juvenile Brown Trout Salmo trutta
by
Ann Erlandsson, Giedrė Ašmonaitė, Bror Jonsson and Larry Greenberg
Fishes 2024, 9(4), 142; https://doi.org/10.3390/fishes9040142 - 19 Apr 2024
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Changes in the number, structure, and function of mitochondria during the early life stages of animals can play an important role for an organism’s metabolic rate, growth, and health. Previous studies have shown that juvenile brown trout (Salmo trutta) subjected to
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Changes in the number, structure, and function of mitochondria during the early life stages of animals can play an important role for an organism’s metabolic rate, growth, and health. Previous studies have shown that juvenile brown trout (Salmo trutta) subjected to elevated temperatures during the embryonic stage respond phenotypically with a reduced metabolic rate. The aim of this study was to explore if embryonic temperature affects the mitochondria content of young brown trout and as such explains the previously found differences in metabolic rates. Here, we optimize a quantitative PCR (qPCR) method for the mitochondria cytochrome c oxidase subunit I gene, and then use the method as a proxy for mitochondrial DNA content. We hypothesize that young trout subjected to elevated temperatures during the embryonic stage respond phenotypically with a reduced mitochondrial DNA content. To test this hypothesis, we subjected brown trout to either control ambient (4.4 ± 1.5 °C) or elevated temperatures (7.1 ± 0.6 °C) during embryogenesis. Subsequently, we extracted DNA from liver and white muscle tissue of juvenile brown trout from the two different incubation temperature treatments and successively optimized qPCR for mitochondrial DNA. We found that the amount of mitochondria DNA in liver tissue was 18 times higher than in white muscle tissue, but there was no significant difference in mitochondria content in liver or muscle tissue between brown trout exposed to elevated and ambient control temperatures during embryogenesis. We conclude that reduced metabolic rate is not likely associated with mitochondria DNA content. We also suggest that qPCR is a simple and cost-effective method to quantify mitochondria DNA in frozen and partly degraded tissue from different treatment groups and a useful proxy for identification of differences in mitochondria number.
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Open AccessArticle
Comparison of Morphometric Parameters, Nutritional Composition, and Textural Properties of Seven Crustaceans Species
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Zhigang Yang, Qingqing Jiang, Wuxiao Zhang, Silei Xia, Hongyan Tian, Fei Liu, Wenping Yang, Yebing Yu, Yanmin Wu, Yongzhi Zhu, Zhiqiang Xu, Zemao Gu, Aimin Wang and Aqin Chen
Fishes 2024, 9(4), 141; https://doi.org/10.3390/fishes9040141 - 17 Apr 2024
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In order to study the muscle quality of different crustaceans, we aim to provide a comprehensive assessment of their muscle quality characteristics as a theoretical reference. In this work, seven major species of farmed and consumer crustaceans were selected, including crayfish (
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In order to study the muscle quality of different crustaceans, we aim to provide a comprehensive assessment of their muscle quality characteristics as a theoretical reference. In this work, seven major species of farmed and consumer crustaceans were selected, including crayfish (Procambarus clarkii), freshwater prawns (Macrobrachium rosenbergii), pacific white shrimp (Litopenaeus vannamei), black tiger shrimp (Penaeus monodon), kuruma prawns (Penaeus japonicus), river prawns (Macrobranchium nipponense), and Chinese shrimp (Penaeus chinensis). Their morphometric parameters, nutritional composition, textural properties, and physical and chemical indexes were comparatively analyzed. The results showed that the meat content (MC, about 14.78%) of crayfish was significantly lower than that of the other six species. By contrast, pacific white shrimp had the highest MC, although the MCs of black tiger shrimp, kuruma prawns, and Chinese shrimp are greater than 40%. All seven crustacean species were high in protein and low in fat, while pacific white shrimp had the highest crude protein, crude lipid, and crude ash content compared to the other crustaceans. The content of threonine (Thr) was the highest in crayfish. The content of methionine (Met) and lysine (Lys) was the highest in freshwater prawns. The content of isoleucine (Ile), leucine (Leu), and non–essential amino acid (NEAA) was the highest in pacific white shrimp. C18:2n-6 (linoleic acid, LA) was the highest in freshwater prawns and pacific white shrimp; C18:3n-3 (linolenic acid, LNA), C20:4n-6 (arachidonic acid, AA), unsaturated fatty acids (UFA), and monounsaturated fatty acids (MUFA) were all the highest in crayfish; and polyunsaturated fatty acids (PUFA) was the highest in freshwater prawns, but the content was not significantly different from crayfish, pacific white shrimp, black tiger shrimp, and Chinese shrimp. Pacific white shrimp had the highest values for hardness, cohesiveness, gumminess, and chewiness. The redness values of crayfish, black tiger shrimp, and Chinese shrimp were significantly higher than those of the other three species except kuruma prawns. Compared to other crustaceans, river prawns had the highest drip loss and cooking loss. Black tiger shrimp and Chinese shrimp had the lowest cooking loss rates. The research shows that the tail muscle of the seven species of crustaceans is rich in protein, essential amino acids, unsaturated fatty acids and low in fat, representing a high-quality protein. Among these crustaceans, the main essential amino acids and essential fatty acids in the tail muscle of pacific white shrimp, freshwater prawns, and crayfish are higher in content and better in nutritional value.
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Open AccessArticle
Two Genotypes of Streptococcus iniae Are the Causative Agents of Diseased Ornamental Fish, Green Terror Cichlid (Aequidens rivulatus)
by
Zhang Luo, Xiaohui Bai, Shuang Hao, Mengyu Wang, Yongjiang Wu and Hanchang Sun
Fishes 2024, 9(4), 140; https://doi.org/10.3390/fishes9040140 - 17 Apr 2024
Abstract
Green terror cichlid (Aequidens rivulatus) is a popular tropical freshwater ornamental fish. In 2021, an unknown disease was observed in cultured A. rivulatus in Tianjin, China, with a cumulative mortality rate of 25% within 7 days of onset. The main clinical
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Green terror cichlid (Aequidens rivulatus) is a popular tropical freshwater ornamental fish. In 2021, an unknown disease was observed in cultured A. rivulatus in Tianjin, China, with a cumulative mortality rate of 25% within 7 days of onset. The main clinical signs were scale loss, skin ulceration, and slight bleeding. Histopathological observation revealed obvious damage to the liver, spleen, and kidney of diseased fish. In addition, abundant granulomas were observed in the spleen and head kidney of the diseased fish. To define the potential pathogens from A. rivulatus, bacteria were isolated from the visceral tissue of diseased fish with conventional methods. An artificial infection experiment was carried out to prove the pathogenicity of the isolated bacteria. The strains HG-2021-1 and HG-2021-3 were isolated from diseased fish and identified as being responsible for the disease. They were identified as Streptococcus iniae based on physiological and biochemical tests, lctO gene detection, and 16S rRNA gene sequence analysis. According to the result of multilocus sequence typing (MLST), HG-2021-1 and HG-2021-3 belong to different genotypes of S. iniae. Furthermore, they were found to contain the virulence genes pgmA, scpI, cpsD, and pdi, and the median lethal dose (LD50) for A. rivulatus was 1.8 × 106 Colony-Forming Units (CFU)/mL and 6.6 × 106 CFU/mL, respectively. To our knowledge, this is the first report of fish coinfected by two genotypes of S. iniae.
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(This article belongs to the Special Issue Advances in Aquatic Diseases and Immunity in Aquaculture)
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Open AccessArticle
Natural Food Intake and Its Contribution to Tambaqui Growth in Fertilized and Unfertilized Ponds
by
Adriana Ferreira Lima, Anderson Guilherme Pereira dos Reis, Vladimir Eliodoro Costa and Wagner Cotroni Valenti
Fishes 2024, 9(4), 139; https://doi.org/10.3390/fishes9040139 - 16 Apr 2024
Abstract
Natural food available in ponds can complement formulated feed in fed aquaculture. This study elucidated the natural food intake and its contribution to tambaqui (Colossoma macropomum) growth in fertilized and unfertilized ponds, using stable isotope and stomach contents analyses. Additionally, it
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Natural food available in ponds can complement formulated feed in fed aquaculture. This study elucidated the natural food intake and its contribution to tambaqui (Colossoma macropomum) growth in fertilized and unfertilized ponds, using stable isotope and stomach contents analyses. Additionally, it described the impact of fertilization management on natural food availability, fish performance, and production costs. Tambaqui juveniles (93.8 ± 15.0 g) were stocked (0.55 fish/m2) in fertilized (Fert) and unfertilized (NoFert) ponds (600 m2) for a culture period of 10 months in quadruplicate. A lower food conversion ratio was observed in Fert ponds. The main natural food items ingested by tambaqui were insects, vegetables, and cladocerans. Plankton contributed 39.4% and 10.7% of muscle formation in Fert and NoFert ponds, respectively. Pond fertilization (2.45 g of nitrogen and 0.80 g of phosphorus per square meter every two weeks) did not significantly affect fish growth, survival, or productivity but had a slightly influence on water quality parameters. However, fertilization increased the zooplankton density (through phytoplankton) in the water, thereby increasing autochthonous food availability for tambaqui consumption. This species demonstrates the ability to alternate between natural food sources and commercial feed without compromising its development. Consequently, tambaqui exhibits suitability for farming within restorative and integrated aquaculture systems as well as intensive systems reliant on commercial feed.
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(This article belongs to the Special Issue Integrated Aquaculture and Monoculture of Low-Trophic Species)
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Open AccessArticle
The Effects of Dietary Fermented Soybean Residue on the Growth, Antioxidant Capacity, Digestive Enzyme Activities, and Microbial Compositions of the Intestine in Furong Crucian Carp (Furong Carp♀ × Red Crucian Carp♂)
by
Hongquan Wang, Zheming Zhang, Feilong Li, Liang Hu, Tiaoyi Xiao, Yurong Zhao and Mengxi Yang
Fishes 2024, 9(4), 138; https://doi.org/10.3390/fishes9040138 - 16 Apr 2024
Abstract
An 8-week feeding experiment aimed to investigate the effects of fermented soybean residue in diets on the growth performance, serum antioxidant parameters, intestinal digestive capacity, and microbial composition of the hindgut of Furong crucian carp. The feeds were formulated to contain 0%, 6%,
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An 8-week feeding experiment aimed to investigate the effects of fermented soybean residue in diets on the growth performance, serum antioxidant parameters, intestinal digestive capacity, and microbial composition of the hindgut of Furong crucian carp. The feeds were formulated to contain 0%, 6%, 12%, 18%, and 24% fermented soybean residue (CON, FSR6, FSR12, FSR18, and FSR24, respectively), respectively, to form five diets (crude protein: 33%; crude lipid: 5%). The results showed that incorporating 6% fermented soybean residue into the diet significantly increased the weight gain rate (WGR) and specific growth rate (SGR) and decreased the feed coefficient rate (p < 0.05). Through regression analysis of WGR and SGR, the optimal levels of the dietary fermented soybean residue of Furong crucian carp were determined to be 6.78% and 7.06%. Incorporating fermented soybean residue into the diet decreased the lipid content of the whole body and the levels of glucose, total cholesterol, and triglyceride in the serum of Furong crucian carp. The inclusion of 6% and 12% fermented soybean residue in the diet markedly increased the antioxidant capacity, intestinal amylase activity, and intestinal villous height of Furong crucian carp (p < 0.05). At the 6% level, fermented soybean residue significantly increased the abundance of Romboutsia and Clostridium_sensu_stricto_1 while significantly decreasing the abundance of Vibrio (p < 0.05), indicating that a 6% level of fermented soybean residue was beneficial for intestinal health. In conclusion, incorporating 6–7% fermented soybean residue into the diet of Furong crucian carp was recommended.
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(This article belongs to the Section Nutrition and Feeding)
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Open AccessFeature PaperArticle
Multi-Scale Coral Reef and Seascape Habitat Variables Combine to Influence Reef Fish Assemblages
by
Katie T. Sievers, Eva C. McClure, Rene A. Abesamis and Garry R. Russ
Fishes 2024, 9(4), 137; https://doi.org/10.3390/fishes9040137 - 15 Apr 2024
Abstract
While benthic characteristics of coral reef habitats are a major driver of the structure of coral reef fish assemblages, non-reef habitats adjacent to coral reefs (e.g., mangroves, seagrass beds, and macroalgal beds) can affect reef fish assemblages. Here, we investigate how reef fish
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While benthic characteristics of coral reef habitats are a major driver of the structure of coral reef fish assemblages, non-reef habitats adjacent to coral reefs (e.g., mangroves, seagrass beds, and macroalgal beds) can affect reef fish assemblages. Here, we investigate how reef fish assemblages respond to local-scale benthic habitats within a coral reef and larger-scale adjacent seascape features (habitats within 500 m of coral reefs) on Siquijor Island in the Philippines. We examined an abundance of species for the entire reef fish assemblage and within the assemblages of parrotfishes (subfamily Scarinae) and wrasses (family Labridae). Five distinct habitat types were identified in a cluster analysis, which incorporated benthic characteristics within coral reefs and habitats adjacent to coral reefs. We found that the diversity and structure of coral reef fish assemblages were affected by benthic characteristics within coral reefs and also by benthic habitat types adjacent to coral reefs. Individual species responses and juveniles of certain species demonstrated uniquely high abundances in habitat clusters characterized by the non-reef habitats surrounding coral reefs. Considering coral reef habitats and adjacent non-reef habitats as a holistic, interconnected seascape will provide better estimations of the drivers of the structures of coral reef fish assemblages.
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(This article belongs to the Special Issue Understanding and Managing the Spatial, Population and Ecological Dynamics of Coral Reef Fish)
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