Aptamer Therapeutics in Cancers: New Advances and Future Trends

A special issue of Biomolecules (ISSN 2218-273X). This special issue belongs to the section "Molecular Medicine".

Deadline for manuscript submissions: 30 September 2024 | Viewed by 1502

Special Issue Editors


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Guest Editor
Institute Experimental Endocrinology and Oncology "Gaetano Salvatore" (IEOS), National Research Council (CNR), 80145 Naples, Italy
Interests: aptamers; targeted delivery; targeted therapy; non-coding RNAs; cancer

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Guest Editor
IRCCS SDN, 80100 Naples, Italy
Interests: aptamers; non-coding RNAs; cancer; targeted therapy; cancer diagnosis

Special Issue Information

Dear Colleagues,

Nucleic acid aptamers represent a revolutionary and winning approach in the field of precision anticancer medicine. Based on their unique three-dimensional shapes, aptamers recognize specific target molecules with high affinity, acting as selective inhibitory agents and/or carriers for targeted delivery. Therefore, aptamers allow the specific recognition of diseased tissues, strongly reducing the occurrence of undesirable off-target effects.

Due to their mode of action, they are called "chemical antibodies", but, thanks to their chemical nature, they exhibit many advantageous features over antibodies, including fast and easy production, high batch fidelity, high tissue penetration, low costs, easy chemical modification, low toxicity and immunogenicity.

To Date, many reports describe the application of aptamers or aptamer-based conjugates as anticancer drugs, also proposing multimodal approaches to improve therapeutic efficacy. Furthermore, several aptamer-based approaches have shown promise in clinical trials.

This Special Issue aims to summarize recent advances in aptamer-based technology and application in major cancer types, discussing advantages, limitations and possible improvements to optimize aptamer development in the near future.

We are pleased to invite you to participate in this Special Issue in Biomolecules by submitting an original or a review article relevant to the field.

I am looking forward to receiving your contributions.

Dr. Silvia Catuogno
Dr. Silvia Nuzzo
Guest Editors

Manuscript Submission Information

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Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • aptamers
  • cancer
  • targeted therapy
  • aptamer-based conjugates
  • aptamer-conjugated nanoparticles

Published Papers (1 paper)

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Research

18 pages, 6100 KiB  
Article
Selection of Aptamers for Use as Molecular Probes in AFM Detection of Proteins
by Maria O. Ershova, Amir Taldaev, Petr V. Konarev, Georgy S. Peters, Anastasia A. Valueva, Irina A. Ivanova, Sergey V. Kraevsky, Andrey F. Kozlov, Vadim S. Ziborov, Yuri D. Ivanov, Alexander I. Archakov and Tatyana O. Pleshakova
Biomolecules 2023, 13(12), 1776; https://doi.org/10.3390/biom13121776 - 12 Dec 2023
Viewed by 1096
Abstract
Currently, there is great interest in the development of highly sensitive bioanalytical systems for diagnosing diseases at an early stage, when pathological biomarkers are present in biological fluids at low concentrations and there are no clinical manifestations. A promising direction is the use [...] Read more.
Currently, there is great interest in the development of highly sensitive bioanalytical systems for diagnosing diseases at an early stage, when pathological biomarkers are present in biological fluids at low concentrations and there are no clinical manifestations. A promising direction is the use of molecular detectors―highly sensitive devices that detect signals from single biomacromolecules. A typical detector in this class is the atomic force microscope (AFM). The high sensitivity of an AFM-based bioanalysis system is determined by the size of the sensing element of an atomic force microscope―the cantilever―the radius of the curvature of which is comparable to that of a biomolecule. Biospecific molecular probe–target interactions are used to ensure detection system specificity. Antibodies, aptamers, synthetic antibodies, and peptides can be used as molecular probes. This study has demonstrated the possibility of using aptamers as molecular probes for AFM-based detection of the ovarian cancer biomarker CA125. Antigen detection in a nanomolar solution was carried out using AFM chips with immobilized aptamers, commercially available or synthesized based on sequences from open sources. Both aptamer types can be used for antigen detection, but the availability of sequence information enables additional modeling of the aptamer structure with allowance for modifications necessary for immobilization of the aptamer on an AFM chip surface. Information on the structure and oligomeric composition of aptamers in the solution was acquired by combining small-angle X-ray scattering and molecular modeling. Modeling enabled pre-selection, before the experimental stage, of aptamers for use as surface-immobilized molecular probes. Full article
(This article belongs to the Special Issue Aptamer Therapeutics in Cancers: New Advances and Future Trends)
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Planned Papers

The below list represents only planned manuscripts. Some of these manuscripts have not been received by the Editorial Office yet. Papers submitted to MDPI journals are subject to peer-review.

Title: Aptamer-guided gene therapy for cancer disease
Authors: Silvia Catuogno
Affiliation: Consiglio Nazionale delle Ricerche, Istituto di Endocrinologia ed Oncologia Sperimentale, Roma, Italy
Abstract: Gene therapy is a strategy capable of correcting genetic alterations in pathological conditions, and can provide successful approaches for the treatment of several human diseases, including cancer. Different methods have been proposed for cancer gene therapy, mainly aimed at inhibiting oncogenes or restoring the function of tumour suppressor genes. These include the use of small interfering RNAs, microRNAs, anti-microRNAs, CRISPR/Cas9 systems and epigenetic modifiers. Despite its great potential, the success of gene therapy for cancer treatment is closely related to the development of safe and effective delivery systems for tumor targeting. To this purpose, nucleic acid aptamers represent ideal tools. Aptamers are short single-stranded oligonucleotides able to bind almost any target of interest, often undergoing cell-specific internalization. So far, many examples of aptamer-nucleic acid conjugates for cancer gene-therapy have been described. In addition, their use as targeting moiety to decor vector systems has been widely reported. Here we summarize the state-of-the-art of aptamer applications for cancer gene therapy, providing key examples, and discussing their advantages and limitations.

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