ROCK2-Specific Inhibitor KD025 Suppresses Adipocyte Differentiation by Inhibiting Casein Kinase 2
Abstract
:1. Introduction
2. Results
2.1. Identification of Novel Targets of KD025
2.2. Binding and Inhibitory Activities of KD025 on CK2α
2.3. CK2α Shows Low Sequential and Structural Similarities with ROCK2
2.4. Downregulation of Adipocyte Differentiation ss Mediated by CK2 Inhibition
2.5. KD025 and CX-4945 Regulate the Intermediate Stage of Adipogenesis
2.6. CK2 Is a Key Regulator in Adipogenesis
3. Discussion
4. Materials and Methods
4.1. Inhibitors
4.2. Drug-Kinase Binding Assay
4.3. Dissociation Constant Measurement
4.4. Sequence Alignment
4.5. Structural Alignment
4.6. CK2 Activity Assay
4.7. Cell Culture
4.8. Oil Red O Staining
4.9. Quantitative Real-Time PCR (qRT-PCR)
4.10. Western Blot Analysis
4.11. Statistical Analysis
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Sample Availability
References
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Kinase | NCBI ID | Length (Residues) | Molecular Weight (kDa) | Kinase Domain # | Catalytic Loop | Activation Segment | PDB ID |
---|---|---|---|---|---|---|---|
ROCK1 | NP_005397.1 | 1354 | 158 | 76–338 | 194–206 | 216–244 | 6E9W |
ROCK2 | NP_004841.2 | 1388 | 161 | 92–354 | 210–222 | 216–244 | 7JOV |
CK2α | NP_001886.1 | 391 | 45 | 39–324 | 152–164 | 175–201 | 6YPN |
CK2α’ | NP_001887.1 | 350 | 41 | 40–325 | 153–165 | 176–202 | 6TGU |
Type | Gene | Primer | Primer Sequence (5′–3′) |
---|---|---|---|
ROCKs | Rock1 | forward | TGCTAACCAAAGATATTGAAATGCT |
reverse | TTTATTTCTTCCTCCTTCTTCAATTT | ||
Rock2 | forward | AATCTCATATGTGCCTTCTTAACAGA | |
reverse | CCCAATTCCATTGATCATTCTT | ||
CK2 | Csnk2a1 | forward | GCCGCCATATTGTCTGTGTG |
reverse | CCCTTTTTCTTCACACTGCGG | ||
Csnk2b | forward | TCCTTGGAAGCACAGCTCC | |
reverse | AGTCTTCATCCACCTCACAGA | ||
Adipogenic genes | Pparg | forward | TGCTGTTATGGGTGAAACTC |
reverse | CTGTGTCAACCATGGTAATT | ||
Cepba | forward | AGCTGCCTGAGAGCTCCTT | |
reverse | GACCCGAAACCATCCTCTG |
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Tran, N.N.Q.; Chun, K.-H. ROCK2-Specific Inhibitor KD025 Suppresses Adipocyte Differentiation by Inhibiting Casein Kinase 2. Molecules 2021, 26, 4747. https://doi.org/10.3390/molecules26164747
Tran NNQ, Chun K-H. ROCK2-Specific Inhibitor KD025 Suppresses Adipocyte Differentiation by Inhibiting Casein Kinase 2. Molecules. 2021; 26(16):4747. https://doi.org/10.3390/molecules26164747
Chicago/Turabian StyleTran, Nhu Nguyen Quynh, and Kwang-Hoon Chun. 2021. "ROCK2-Specific Inhibitor KD025 Suppresses Adipocyte Differentiation by Inhibiting Casein Kinase 2" Molecules 26, no. 16: 4747. https://doi.org/10.3390/molecules26164747
APA StyleTran, N. N. Q., & Chun, K. -H. (2021). ROCK2-Specific Inhibitor KD025 Suppresses Adipocyte Differentiation by Inhibiting Casein Kinase 2. Molecules, 26(16), 4747. https://doi.org/10.3390/molecules26164747