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Article

Isolation and Identification of a Urinary Biomarker for Lung Cancer: 27-Nor-5β-Cholestane-3α,7α,12α,24R,25S Pentol Glucuronide and Its Deuterated Analog

by
Burchelle Blackman
1,*,
Natarajan Raju
1,
Chandrasekhar Mushti
1,
Kelly Lane
1,2,
Daxeshkumar Patel
3,
Curtis Harris
3 and
Rolf E. Swenson
1,*
1
Chemistry and Chemical Synthesis Center, National Heart, Lung, and Blood Institute, National Institutes of Health, 9800 Medical Center Drive, Rockville, MD 20850, USA
2
AstraZeneca, 1 MedImmune Way, Gaithersburg, MD 20878, USA
3
Laboratory of Human Carcinogenesis, Center for Cancer Research, National Cancer Institute, Bethesda, MD 20892, USA
*
Authors to whom correspondence should be addressed.
Molecules 2024, 29(12), 2781; https://doi.org/10.3390/molecules29122781
Submission received: 6 May 2024 / Revised: 1 June 2024 / Accepted: 3 June 2024 / Published: 11 June 2024
(This article belongs to the Section Organic Chemistry)
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Versions Notes

Abstract

:
An untargeted metabolomic study identified four potential lung cancer diagnostic biomarkers in human urine. One of the potential biomarkers was an unidentified feature possessing a m/z value of 561+. “561+” was isolated from human urine and tentatively identified as 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronide with unknown C24,25 stereochemistry using 1H NMR and mass spectrometry. In a prior report, the C24,25 stereochemistry of the aglycone, 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol, was found to be 24S,25R through GC analysis of the acetonide-TMS derivative. An authentic sample was prepared and found not to have the same stereochemistry as ”561+”. To identify the C24,25 stereochemistry, four C24,C25 diastereoisomeric alcohols of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol were prepared from chiral amino acids. Using an LCMS method, the C24,C25 stereochemistry of the “561+” aglycone was determined to be 24R,25S. With the correct aglycone in hand, it was coupled with glucuronic acid to complete the first reported synthesis of 27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol glucuronide. Deuterium labeled 27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol was also synthesized for use as an internal standard for MS quantitation.

1. Introduction

Lung cancer, known as lung carcinoma, is the most common cause of cancer deaths in the United States [1]. This is primarily because most patients are diagnosed in advanced disease states. The 5-year survival rate is between 18% and 21% [1]. Early diagnosis and treatment lead to a better prognosis. An untargeted metabolomic study identified four potential urinary metabolite biomarkers for lung cancer diagnosis [2]. The four biomarkers, creatine riboside (CR), N-acetylneuraminic acid (NANA), cortisol sulfate, and the indeterminate feature “561+”, were found to correctly identify a patient’s cancer status (+/−cancer) [2]. When “561+” was isolated from human urine, m/z 561+ was discovered to be a fragment ion of m/z 615+ (see Supplementary Materials). By searching the chemical literature and MS databases for compounds with similar fragmentation patterns, “561+” was tentatively identified as 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronide of unknown C24,25 stereochemistry.
There are few reports of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol as the aglycone or the glucuronide in the literature. 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronide is the major bile alcohol found in human urine [3,4,5,6,7]. The presence of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol in urine has been associated with liver disease [3,4,5,6,7,8] and disorders of lipid [9] storage. Recently, 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronide, detected by LC/MS, was reported as a potential biomarker in serum for epithelium ovarian cancer by Wu and coworkers [10,11].
The prior reports did not disclose the absolute stereochemistry at C24 and C25. Therefore, in 2000, Une and coworkers [12] synthesized the four C24,C25 isomers of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol. By comparing the GC retention times of the acetonide-TMS derivatives, (24S,25R)-27-nor-5β-cholestane-3α,7α,12α,24,25-pentol was found to be the major bile alcohol, followed by a small amount of (24R,25R) in the urine of healthy individuals. This assignment was supported by the work of Dayal and coworkers [9], who assigned C24 as 24S based on lanthanide-induced circular dichroism Cotton effect measurements.
We intended to prepare an authentic standard 24S,25R pentol to confirm the identification of “561+” in our sample. During the course of our research, we discovered that the reported C24,C25 stereochemistry did not match “561+”. Now, we report the synthesis of the four 24,25 diastereoisomeric alcohols of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol employing a chiral pool approach and the identity of C24,C25 stereochemistry of “561+”.

2. Results and Discussion

Our approach for the synthesis of the four diastereoisomeric 27-nor-5β-cholestane-3α,7α,12α,24,25 pentols, 2a–d, is shown in Scheme 1. The stereochemistry of the C24 and C25 diols was derived from the chiral 2-amino-3-hydroxy butanoic acid. Coupling with D-glucuronic acid derivative 3, followed by deprotection would give the final compounds 1a–d. The side chain of 2a–d containing the C24 and C25 alcohols was introduced by a cross metathesis reaction of a suitably protected C22-alkene steroid (4) and chiral 3,4 dihydroxybut-1-ene (5a–d). Homochiral dihydroxybut-1-enes 5a–d were prepared from commercially available chiral 2-amino-3-hydroxy butanoic acids (6a–d). The C22-alkene steroid 4 was prepared from cholic acid by known methods [13,14].
The synthesis of the cross metathesis precursor alkene 5a began with the diazotization of L-allothreonine (6a) in water (Scheme 2), followed by the conversion of the carboxylic acid to a methyl ester with 7a trimethyl orthoformate [15]. Diol 7a was protected as dibenzyl ether 8a before reduction of the methyl ester with DIBAL-H to afford aldehyde 9a in 60% yield. Treatment of aldehyde 9a with methyltriphenylphosphonium iodide afforded alkene 5a in 80% yield. The remaining diastereoisomeric alkenes (5b–d) were prepared in a similar manner.
With the chiral alkenes 5a–d synthesized, alkene 4 was prepared using reported methods [13,14]. A cross-metathesis reaction (Scheme 3), using the 2nd generation Grubbs-Hoveyda catalyst [16,17], coupled alkenes 4 and 5a. The resulting mixtures of alkenes 10a was hydrogenated with palladium on carbon. Finally, global deprotection afforded aglycone 2a. The remaining diastereomeric aglycones 2b–d were prepared in a similar fashion.
Once the four diastereomeric aglycones 2a–d were prepared, we developed an LCMS method for stereochemical assignment that, unlike prior methods, does not require derivatization. Because the aglycone readily fragments in positive electrospray ionization mass spectrometry mode, the pseudomolecular ion m/z = 385.3+ was used to extract chromatograms for detection and quantitation (Figure 1).
We found that treating human urine from lung cancer patients containing 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronide with β-glucuronidase released the unexpected 24R,25S aglycone, 2a, rather than the expected 24S,25R aglycone, 2b (Figure 2). A small amount of 24S,25S aglycone, 2d, was also observed. Une and coworkers [12] reported a 9:1 mixture of diastereomeric aglycones in human urine, with 24S,25R, 2a, as the major isomer and 24R,25R, 2c, as the minor.
Starting from aglycone 2a, we prepared the corresponding glucuronide, 1a (Scheme 4). The fully protected pentol 10a, from the cross-metathesis reaction, was selectively deprotected at the C2 position to give alcohol 11. Treatment with trichloroacetimidate (3) affords fully protected glucuronide 12. Reduction of the C22 alkene followed by global deprotection completed the first total synthesis of 27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol glucuronide (1a).
Now that we have authentic standard 1a, the structure of “561+” was confirmed as 27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol glucuronide (1a) by LCMS (Figure 3). We also discovered that m/z 561+ is a fragment ion of the molecular ion m/z = 615.4+ (Figure 4).
To aid quantitation by mass spectrometry, the d4-aglycone 16 [18] was prepared from cholic acid-d4 following similar chemistry as reported for compound 2a (Scheme 5). Cholic acid-d4 was fully protected as the triacetate 13 using acetic anhydride in pyridine. Oxidative decarboxylation gave the cross-metathesis precursor 14. The cross metathesis of alkenes 14 and 5a afforded 15 as a mixture of alkenes. Simultaneous debenzylation and alkene reduction followed by removal of the acetate groups gave the d4-labeled 27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol (16) in five linear steps from commercially available starting materials.

3. Materials and Methods

3.1. Instrumentation

NMR spectra were recorded on a Varian 400 MHz instrument (400 MHz for 1H and 100 MHz for 13C), and all chemical shift values referred to δ TMS = 0.00 ppm (δ (1H)) and CDCl3 (δ (13C), 77.16 ppm). LC/MS data were secured from an Agilent 1200 LC/MS spectrometer. The HRMS analysis was achieved on a Waters Xevo G2-XS using ESI ionization.

3.2. Materials

All the chemicals and solvents were procured from Sigma Aldrich unless otherwise stated. Trichloroacetimidate was purchased from Toronto Chemicals Industries.

3.3. Isolation of “561+” from Urine from Lung Cancer Patients

561+ was purified from 500 mL of urine from lung cancer patients in three steps. First, 100–200 mL of the urine was centrifuged in 50 mL conical tubes at 3200× g for 10 min to pellet any particulate material. A 10 g Sep-Pak C18 was conditioned with 2 × 20 mL methanol followed by 2 × 20 mL water. The urine supernatant was loaded onto the conditioned Sep-Pak and washed sequentially with 2 × 20 mL water + 0.1% formic acid, 2 × 20 mL 50% methanol/50% water + 0.1% formic acid, and 20 mL 75% methanol/25% H2O + 0.1% formic acid. The ion of interest was then eluted with 3 × 20 mL methanol + 0.1% formic acid and dried by Speedvac. Next, 561+ was purified by HPLC using a Waters XBridge Prep C18 (10 µm, 10 × 250 mm) run at 4 mL/min at a gradient of 2–20% B (0–10 min), 20–95% B (10–37 min), and 95% B (37–42 min) (A = water + 0.1% formic acid, B = acetonitrile + 0.1% formic acid). 561+ was eluted in the second gradient, and fractions containing this ion were dried by Speedvac. Lastly, 561+ was further purified by analytical HPLC using a Waters XBridge C18 column (5 µm, 4.6 × 150 mm) run at 1 mL/min at a gradient of 50% B (0–3 min), 50–95% B (3–23 min), and 95% B (23–26 min) (A = H2O + 0.1% formic acid, B = Methanol + 0.1% formic acid). 561+ eluted late in the second gradient. The final compound was dried by Speedvac.

3.4. Synthesis

3.4.1. General Procedure for the Synthesis of Methyl Dihydroxybutyrates (7a–d)

Methyl (2S,3S)-2,3-dihydroxybutanoate (7a). To an ice-cold solution of L-allothreonine (11.9 g, 0.1 mol) in water (25.0 mL) and 2N sulfuric acid (51.0 mL, 0.102 mol), sodium nitrite in water (13.8 g, 0.101 mol in 20 mL) was added dropwise over a 1 h period at 0 °C with vigorous stirring. After the addition, the solution was allowed to come to room temperature and stirred for 20 h. All the volatiles were removed under reduced pressure at room temperature, then the residue was diluted with 1:1 MeOH/i-PrOH (20.0 mL) and filtered. The filtrate was concentrated again to a thick syrup, and the crude product was taken to the next step.
The crude dihydroxy acid (10.0 g) was dissolved in 250 mL of anhydrous methanol and stirred under argon. Trimethyl orthoformate (50 mL) was added, followed by IR-120 acid resin (50.0 g), and stirred at room temperature for 72 h. The resin was filtered and washed with methanol (3 × 50 mL), and the filtrates were combined and evaporated under reduced pressure to yield a brown oil. Chromatography of the crude ester using 220.0 g of flash silica (Teledyne-Isco) and elution with 6:4 ethyl acetate/hexanes yielded 7a as colorless oil. Yield: 4.8 g (35%). 1H NMR (400 MHz, CDCl3) δ 4.21 (d, J = 8 Hz, 1H), 4.03 (m, 1H), 3.72 (s, 3H), 3.10 (bs, 2H), 1.10 (d, J = 12 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 173.04, 74.60, 69.06, 52.39, 17.21.
Methyl (2R,3R)-2,3-dihydroxybutanoate (7b) [19,20,21]: 1H NMR (400 MHz, CDCl3) δ 4.22 (d, J = 3.6 Hz, 1H), 4.07–4.03 (m, 1H), 3.79 (s, 3H), 3.12 (s, 2H), 1.17 (d, J = 6.5 Hz, 3H); 13C NMR (101 MHz, CDCl3) δ 17.21, 52.32, 69.07, 74.54, 173.10. 13C NMR (101 MHz, CDCl3) δ 173.10, 74.54, 69.07, 52.53, 17.32.
Methyl (2S,3R)-2,3-dihydroxybutanoate (7c) [22]: 1H NMR (400 MHz, CDCl3) δ 4.09 (qd, J = 6.5, 2.7 Hz, 1H), 4.02 (d, J = 2.8 Hz, 1H), 3.82 (s, 3H), 2.87 (d, J = 4.9 Hz, 3H), 1.30 (d, J = 6.5 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 173.77, 74.38, 68.68, 52.78, 19.58.
Methyl (2R,3S)-2,3-dihydroxybutanoate (7d) [23]: 1H NMR (400 MHz, CDCl3) δ 4.12–4.03 (m, 1H), 4.02 (d, J = 2.7 Hz, 1H), 3.81 (s, 3H), 2.80 (bs, 2H), 1.30 (d, J = 6.5 Hz, 3H). 13C NMR (100 MHz, CDCl3) δ 19.57, 52.76, 68.47, 74.47, 173.79.

3.4.2. General Procedure for the Synthesis of Methyl-bis-O-benzylbutyrate (8a–d)

Methyl (2S,3S)-2,3-bis(benzyloxy)butanoate (8a). Sodium hydride (60% in oil, 2.88 g, 72.0 mmol) was suspended in 50.0 mL of anhydrous DMF and stirred under argon at −20 °C. The dihydroxy ester 7a (4.8 g, 35.8 mmol) in anhydrous DMF (50.0 mL) was added dropwise to the stirred suspension over a 1 h period. The stirring was continued for 1 h more at −20 °C, and benzyl bromide (12.31 g, 72.0 mmol) was added dropwise with stirring over 1 h. The reaction was continued for 2 h more after the addition at −20 °C. Saturated ammonium chloride (50 mL) was carefully added to the reaction mixture and diluted with 500 mL of water. The solution was extracted with ethyl acetate (3 × 150 mL). The combined extracts were washed with water (2 × 200 mL), saturated sodium chloride (1 × 200 mL), and dried over Na2SO4. The solution was filtered, concentrated under reduced pressure, and the resulting oil was purified using 120.0 g of flash silica. Elution with 10% ethyl acetate in hexanes yielded 8a as colorless oil. Yield: 2.8 g (25%). 1H NMR (400 MHz, CDCl3) δ 7.3 (m, 1H), 4.7 (AB q, 2H), 4.6 (m, 2H), 4.1 (d, 1H, J = 2 Hz), 3.9 (m, 1H), 3.77 (3H), 1.3 (d, J = 12 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 16.38, 51.91, 51.93, 71.29, 72.66, 75.83, 127.59, 127.54, 127.59, 127.68, 127.91, 128.06, 128.33, 128.41, 171.65.
Methyl (2R,3R)-2,3-bis(benzyloxy)butanoate (8b): 1H NMR (400 MHz, CDCl3) δ 7.44–7.22 (m, 1H), 4.73 (d, J = 11.9 Hz, 2H), 4.59–4.44 (m, 3H), 4.02 (d, J = 5.2 Hz, 1H), 3.88 (qd, J = 6.3, 5.2 Hz, 1H), 3.74 (s, 3H), 1.29 (d, J = 6.3 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 171.64, 138.24, 137.30, 128.37, 128.29, 128.03, 127.88, 127.64, 127.55, 81.03, 75.78, 72.63, 71.26, 51.90, 16.33.
Methyl (2S,3R)-2,3-bis(benzyloxy)butanoate (8c): 1H NMR (400 MHz, CDCl3) δ 7.41–7.17 (m, 1H), 4.81 (d, J = 11.9 Hz, 1H), 4.62 (d, J = 11.9 Hz, 1H), 4.57–4.41 (m, 2H), 3.96 (dd, J = 4.4, 1.1 Hz, 1H), 3.89 (td, J = 6.5, 4.7 Hz, 1H), 3.71 (s, 3H), 1.22 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 171.29, 138.33, 137.31, 128.35, 128.25, 128.18, 127.89, 127.83, 127.54, 81.34, 75.03, 72.84, 71.44, 51.80, 15.86.
Methyl (2R,3S)-2,3-bis(benzyloxy)butanoate (8d): 1H NMR (400 MHz, CDCl3) δ 7.37–7.23 (m, 1H), 4.81 (d, J = 12.0 Hz, 1H), 4.62 (d, J = 12.0 Hz, 1H), 4.53 (d, J = 12.0 Hz, 1H), 4.46 (d, J = 12.0 Hz, 1H), 3.95 (d, J = 4.5 Hz, 1H), 3.89 (td, J = 6.3, 4.4 Hz, 1H), 1.22 (d, J = 6.3 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 171.30, 138.33, 137.32, 128.36, 128.26, 128.19, 127.90, 127.85, 127.56, 81.33, 75.03, 72.85, 71.44, 51.82, 15.87.

3.4.3. General Procedure for the Synthesis of bis-O-Benzyl-1-butanal (9a–d)

(2S,3S)-2,3-bis(benzyloxy)butanal (9a). A solution of 2S, 3S-bis-O-benzyl ester 8a (6.0 g, 219.1 mmol) in anhydrous toluene (20.0 mL) was cooled to −70 °C under argon, and DIBAL (1M in toluene, 30.6 mL, 30.6 mmol) was added dropwise over a period of 1 h with vigorous stirring. After the addition, the reaction was continued for 1 h more at −70 °C and then carefully quenched with the dropwise addition of methanol (10.0 mL) at −70 °C. The reaction mixture was diluted with toluene (50.0 mL), and the organic layer was washed with 2M HCl until the toluene layer was clear of the aluminum salts. The organic layer was washed with water (3 × 50 mL) and dried (Na2SO4). The organic layer was filtered, concentrated under reduced pressure at RT, and the resulting oil was purified by a silica gel column (pre-packed 120.0 g, Teledyne-Isco). Elution with 10% ether in hexanes yielded aldehyde 9a as colorless oil. Yield: 3.2 g (59%). 1H NMR (400 MHz, CDCl3) δ 9.76 (d, J = 1.5 Hz), 7.39–7.22 (m, 10H), 5.95–5.81 (m, 1H), 5.39–5.26 (m, 2H), 4.67 (d, J = 12.1 Hz, 1H), 4.61 (s, 2H), 4.43 (d, J = 12.1 Hz, 1H), 3.79 (ddt, J = 7.5, 4.4, 0.9 Hz, 1H), 3.65 (qd, J = 6.3, 4.4 Hz, 1H), 1.22 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 16.24, 70.44, 70.46, 71.36, 77.18, 83.40, 118.83, 127.38, 127.40, 127.64, 127.66, 128.27, 128.30, 135.84, 138.73, 138.95.
(2R,3R)-2,3-bis(benzyloxy)butanal (9b): 1H NMR (400 MHz, CDCl3) δ 9.71 (d, J = 2.0 Hz, 1H), 7.40–7.26 (m, 10H), 4.72 (d, J = 11.8 Hz, 1H), 4.67–4.60 (m, 2H), 4.54 (d, J = 11.9 Hz, 1H), 3.92 (qd, J = 6.4, 4.3 Hz, 1H), 3.85 (dd, J = 4.3, 2.0 Hz, 1H), 1.30 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 202.61, 138.07, 137.32, 128.52, 128.41, 128.06, 128.04, 127.70, 127.63, 85.73, 75.32, 72.95, 71.17, 16.18.
(2S,3R)-2,3-bis(benzyloxy)butanal (9c): 1H NMR (400 MHz, CDCl3) δ 9.74 (d, J = 1.5 Hz, 1H), 7.41–7.20 (m, 10H), 4.79 (d, J = 12.0 Hz, 1H), 4.67–4.39 (m, 4H), 3.93 (qd, J = 6.4, 4.3 Hz, 1H), 3.78 (dd, J = 4.2, 1.5 Hz, 1H), 1.26 (d, J = 6.4 Hz, 4H). 13C NMR (101 MHz, CDCl3) δ 203.38, 137.89, 137.14, 128.51, 128.37, 128.18, 128.13, 127.80, 127.74, 85.43, 74.80, 73.21, 71.36, 15.70.
(2R,3S)-2,3-bis(benzyloxy)butanal (9d): 1H NMR (400 MHz, CDCl3) δ 9.76 (d, J = 1.5 Hz, 1H), 7.39–7.23 (m, 10H), 4.80 (d, J = 12.0 Hz, 1H), 4.67–4.45 (m, 3H), 3.94 (qd, J = 6.4, 4.3 Hz, 1H), 3.80 (dd, J = 4.2, 1.5 Hz, 1H), 1.28 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 202.65, 138.06, 137.31, 128.52, 128.41, 128.06, 128.02, 127.70, 127.64, 85.53, 75.30, 72.91, 71.21, 16.18.

3.4.4. General Procedure for the Synthesis of bis-O-Benzylbut-1-ene (5a–d)

((((2S,3R)-pent-4-ene-2,3-diyl)bis(oxy))bis(methylene))dibenzene (5a). Methyl triphenylphosphonium iodide (1.55 g, 3.84 mmol) in anhydrous THF (20 mL) was cooled to −78 °C under argon and stirred. n-BuLi (1.6 M in hexanes, 2.2 mL, 3.51 mmol) was added dropwise and stirred at −78 °C for 1 h, allowed to come to 0 °C, and stirred for an additional 1 h. The orange solution of the phosphorane was cooled back to −78 °C, and aldehyde 9a (0.9 g, 3.19 mmol) in anhydrous THF (5.0 mL) was added dropwise over 15 min and the reaction was stirred at −78 °C for 2 h, allowed to come to 0 °C, and the reaction was continued for 16 h more. Saturated ammonium chloride (5.0 mL) was added to quench the reaction and diluted with 50 mL of ethyl acetate. The organic layer was washed with water (3 × 25 mL), saturated sodium chloride (1 × 50 mL), and dried over Na2SO4. The solution was filtered, concentrated under reduced pressure at room temperature, and the residue chromatographed using 40 g of flash silica. Elution with 5% ethyl acetate in hexanes yielded olefin 5a as a colorless oil. Yield: 0.715 g (80%). 1H NMR (400 MHz, CDCl3) δ 7.39–7.18 (m, 10H), 5.87 (ddd, J = 17.3, 10.5, 7.5 Hz, 1H), 5.38–5.20 (m, 2H), 4.65 (dq, J = 12.1, 0.6 Hz, 1H), 4.59 (d, J = 0.5 Hz, 2H), 4.42 (dd, J = 12.1, 0.5 Hz, 1H), 3.78 (ddt, J = 7.5, 4.4, 1.0 Hz, 1H), 3.63 (qd, J = 6.4, 4.4 Hz, 1H), 1.21 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 138.97, 138.74, 135.86, 128.45, 127.79, 127.38, 118.81, 83.42, 77.19, 71.40, 70.44, 16.25.
((((2R,3S)-pent-4-ene-2,3-diyl)bis(oxy))bis(methylene))dibenzene (5b) [24] 1H NMR (400 MHz, CDCl3) δ 7.41–7.24 (m, 10H), 5.90 (ddd, J = 17.2, 10.5, 7.5 Hz, 1H), 5.41–5.25 (m, 2H), 4.68 (dd, J = 12.1, 0.6 Hz, 1H), 4.63 (d, J = 0.5 Hz, 2H), 4.45 (dd, J = 12.2, 0.5 Hz, 1H), 3.81 (ddt, J = 7.5, 4.3, 0.9 Hz, 1H), 3.66 (qd, J = 6.4, 4.4 Hz, 1H), 1.24 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 138.93, 138.71, 135.82, 128.27, 128.24, 127.63, 127.61, 127.37, 127.35, 118.79, 83.39, 77.15, 71.33, 70.44, 16.21.
((((2R,3R)-pent-4-ene-2,3-diyl)bis(oxy))bis(methylene))dibenzene (5c) 1H NMR (400 MHz, CDCl3) δ 7.39–7.25 (m, 10H), 5.94–5.78 (m, 1H), 5.38–5.26 (m, 1H), 4.65 (d, J = 11.9 Hz, 3H), 4.43 (d, J = 12.0 Hz, 1H), 3.86 (ddt, J = 7.5, 5.8, 1.0 Hz, 1H), 3.71–3.56 (m, 1H), 1.16 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 138.97, 138.67, 135.27, 128.27, 128.25, 127.67, 127.65, 127.40, 127.38, 118.64, 83.44, 76.84, 71.73, 70.58, 16.12.
((((2S,3S)-pent-4-ene-2,3-diyl)bis(oxy))bis(methylene))dibenzene (5d) 1H NMR (400 MHz, CDCl3) δ 7.34–7.08 (m, 10H), 5.75 (ddd, J = 16.7, 10.9, 7.5 Hz, 1H), 5.30–5.17 (m, 2H), 4.57 (d, J = 12.2 Hz, 3H), 4.35 (d, J = 12.0 Hz, 1H), 3.77 (ddt, J = 7.5, 5.8, 1.0 Hz, 1H), 3.66–3.48 (m, 1H), 1.08 (d, J = 6.4 Hz, 3H). 13C NMR (101 MHz, CDCl3) δ 138.97, 138.68, 135.28, 128.28, 127.64, 127.39, 118.66, 83.45, 76.84, 71.74, 70.59, 16.13.

3.4.5. General Procedure for the Synthesis of Bisbenzyl Aglycones (10a–d)

(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-17-((2R,5R,6S)-5,6-bis(benzyloxy)hept-3-en-2-yl)-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triyl triacetate (10a). Olefins 4 [25,26,27,28] (0.15 g, 0.31 mmol) and 5a (0.434 g, 1.55 mmol) were dissolved in 5.0 mL of benzene and degassed with argon for 5.0 min. Hoveyda-Grubb’s 2nd generation catalyst (97.0 mg, 10 mol%) was added to the mixture and refluxed under argon for 20 h. The crude reaction mixture was adsorbed onto 5.0 g of silica gel and dried under vacuum. The dry powder was loaded onto a loading cartridge and purified on a 24.0 g flash silica column. Elution with 25% ethyl acetate in hexanes yielded 10a as a pale brown gum that was contaminated with other olefinic side products. It was taken to the next step without further purification. Yield: 69.0 mg (30%, partially purified).

3.4.6. General Procedure for the Synthesis of 27-Nor-5β-Cholestane-3α,7α,12α,24,25 Pentol (2a–d)

(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-17-((2R,5R,6S)-5,6-dihydroxyheptan-2-yl)-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol (2a) [12]. Compound 10a (69.0 mg, 0.093 mmol) was hydrogenated using a balloon for 20 h in the presence of 10%Pd/C (14.0 mg) in methanol for 20 h at room temperature. The catalyst was filtered off, and the filtrate was concentrated into a paste. The crude hydrogenated product was refluxed with 1M KOH in methanol (6.0 mL, 60.0 equiv.) for 6 h. The pH of the deprotected product was adjusted to about 5.0 with IR-120 acid resin. The resin was filtered off, and the filtrate was concentrated into a paste and chromatographed using 12.0 g of flash silica. Elution with 10% methanol in chloroform yielded 2a as a colorless solid. Yield: 20.3 mg (50%). 1H NMR (400 MHz, CD3OD) δ 3.96 (t, J = 2.9 Hz, 1H), 3.79 (d, J = 3.1 Hz, 1H), 3.53 (td, J = 6.4, 5.5 Hz, 1H), 3.42–3.33 (m, 1H), 2.34–2.20 (m, 2H), 2.04–1.21 (m, 21H), 1.15 (d, J = 6.4 Hz, 3H), 1.12–1.05 (m, 1H), 1.02 (d, J = 6.5 Hz, 3H), 0.96 (dd, J = 14.1, 3.5 Hz, 1H), 0.91 (s, 3H), 0.72 (s, 3H). 13C NMR (101 MHz, CD3OD) δ 77.11, 74.17, 72.95, 71.96, 69.14, 47.51, 43.27, 43.05, 41.10, 40.54, 37.14, 36.55, 35.96, 33.36, 31.24, 30.46, 29.64, 28.86, 27.94, 24.30, 23.21, 18.63, 18.05, 13.06. HRMS (ESI) calcd for C26H46O4Na [M + Na]+ 461.3243; found 461.3228.
(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-17-((2R,5S,6R)-5,6-dihydroxyheptan-2-yl)-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol (2b) [12]: 1H NMR (400 MHz, CD3OD) δ 3.96 (t, J = 3.0 Hz, 1H), 3.79 (q, J = 3.0 Hz, 1H), 3.68 (s, 1H), 3.56 (dd, J = 6.4, 5.1 Hz, 1H), 3.41–3.23 (m, 3H), 2.34–2.16 (m, 2H), 2.04–1.17 (m, 18H), 1.14 (d, J = 6.4 Hz, 3H), 1.12–1.05 (m, 1H), 1.03 (d, J = 6.6 Hz, 3H), 0.96 (dd, J = 14.1, 3.4 Hz, 1H), 0.91 (s, 3H), 0.71 (s, 3H). 13C NMR (101 MHz, CD3OD) δ 76.09, 72.68, 71.46, 70.27, 67.66, 46.87, 46.01, 41.78, 41.56, 39.61, 39.05, 36.09, 35.08, 32.14, 29.76, 29.21, 28.17, 27.37, 26.46, 22.83, 21.74, 16.81, 16.71, 11.59. HRMS (ESI) calcd for C26H46O4Na [M + Na]+ 461.3243; found 461.3227.
(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-17-((2R,5R,6R)-5,6-dihydroxyheptan-2-yl)-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol (2c) [12]: 1H NMR (400 MHz, CD3OD) δ 3.96 (t, J = 3.0 Hz, 1H), 3.79 (q, J = 3.0 Hz, 1H), 3.63–3.52 (m, 1H), 3.41–3.33 (m, 1H), 3.32–3.23 (m, 4H), 2.34–2.19 (m, 2H), 2.03–1.22 (m, 15H), 1.13 (d, J = 6.4 Hz, 3H), 1.07 (dd, J = 12.0, 6.0 Hz, 3H), 0.98 (d, J = 3.4 Hz, 3H), 0.94 (d, J = 3.4 Hz, 3H), 0.91 (s, 3H), 0.72 (s, 3H). 13C NMR (101 MHz, CD3OD) δ 75.56, 72.69, 71.47, 70.20, 67.66, 46.04, 41.79, 41.57, 39.61, 39.05, 35.67, 35.07, 34.49, 34.43, 31.72, 29.76, 28.69, 28.16, 27.37, 26.46, 22.82, 21.74, 17.61, 16.54, 11.59. HRMS (ESI) calcd for C26H46O4Na [M + Na]+ 461.3243; found 461.3232.
(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-17-((2R,5S,6S)-5,6-dihydroxyheptan-2-yl)-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol (2d) [12]: 1H NMR (400 MHz, CD3OD) δ 4.01–3.92 (m, 1H), 3.81 (q, J = 3.0 Hz, 1H), 3.61 (qd, J = 6.4, 4.9 Hz, 1H), 3.45–3.30 (m, 3H), 3.26 (ddd, J = 8.2, 5.0, 3.1 Hz, 1H), 3.01 (s, 1H), 2.87 (d, J = 0.7 Hz, 1H), 2.36–2.20 (m, 2H), 2.06–1.19 (m, 17H), 1.15 (d, J = 6.4 Hz, 3H), 1.13–1.06 (m, 1H), 1.04 (d, J = 6.6 Hz, 3H), 0.98 (dd, J = 14.2, 3.5 Hz, 1H), 0.93 (s, 3H). 13C NMR (101 MHz, CD3OD) δ 76.62, 75.40, 73.91, 71.60, 50.79, 49.94, 45.72, 45.50, 43.55, 42.99, 40.02, 39.01, 38.42, 38.37, 35.98, 33.70, 32.81, 32.11, 31.31, 30.40, 26.76, 25.68. HRMS (ESI) calcd for C26H46O4Na [M + Na]+ 461.3243; found 461.3230.

3.4.7. Synthesis of 27-Nor-5β-Cholestane-3α,7α,12α,24,25 Pentol Glucuronides (1a)

(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-17-((2R,5R,6S)-5,6-bis(benzyloxy)hept-3-en-2-yl)-3-hydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthrene-7,12-diyl diacetate (11). A solution of 10a (0.15 g, 0.2 mmol) in methanol was stirred with potassium carbonate (70.0 mg, 0.5 mmol) for 6 h at RT. Analysis by LC/MS indicated the complete consumption of the starting material. The solution was concentrated and chromatographed over 12.0 g of flash silica. Elution with 2% methanol in dichloromethane yielded 11 as a colorless gum. Yield: 0.12 g (85%). It was taken to the next step without further purification. 1H NMR (400 MHz, CDCl3) δ 7.37–7.27 (m, 10H), 7.27–7.21 (m, 4H), 5.52–5.35 (m, 2H), 5.08 (d, J = 3.0 Hz, 1H), 4.89 (d, J = 3.2 Hz, 1H), 4.64 (s, 1H), 4.60 (d, J = 4.3 Hz, 3H), 4.38 (d, J = 12.2 Hz, 1H), 3.70–3.56 (m, 2H), 3.55–3.45 (m, 1H), 2.14 (s, 5H), 2.07 (s, 4H), 2.04–1.88 (m, 3H), 1.85 (dt, J = 11.9, 6.0 Hz, 1H), 1.80–1.70 (m, 3H), 1.64 (d, J = 7.7 Hz, 3H), 1.62 (d, J = 5.0 Hz, 3H), 1.54–1.39 (m, 3H), 1.38–0.93 (m, 13H), 0.91 (s, 4H), 0.74 (s, 3H). 13C NMR (101 MHz, CDCl3) δ 170.59, 141.72, 128.21, 127.59, 127.31, 125.00, 83.09, 75.26, 71.73, 71.38, 70.81, 69.87, 47.17, 45.02, 43.46, 41.03, 39.30, 38.67, 37.75, 34.86, 34.30, 31.35, 30.46, 29.03, 27.73, 25.61, 22.83, 22.55, 21.62, 20.23, 16.42, 12.50.
(2R,3R,4S,5S,6S)-2-(((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-7,12-diacetoxy-17-((2R,5R,6S)-5,6-bis(benzyloxy)hept-3-en-2-yl)-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-3-yl)oxy)-6-(methoxycarbonyl)tetrahydro-2H-pyran-3,4,5-triyl tribenzoate (12). Alcohol 11 (0.12 g, 0.17 mmol) and trichloroacetimidate of 3,4,5-tribenzoylglucuronic acid methyl ester, 3 (0.319 g, 0.48 mmol) were dissolved in 5.0 mL of anhydrous dichloromethane and stirred with 2.0 g of 4Å mol sieves for 1 h. The solution was cooled to −40 °C, and TMS triflate (11.0 mg, 0.048 mmol, 10 mol%) was added and stirred under argon for 2 h, allowed to come to RT, and continued for 16 more hours. The reaction was quenched with 1.0 mL of triethylamine, adsorbed onto 5.0 g of silica gel, and dried to a powder. The crude product with silica was loaded onto an empty cartridge, connected to another cartridge of 24.0 g of flash silica gel, and chromatographed. Elution with 10% ethyl acetate in toluene yielded the product contaminated with sugar impurities that were found to be difficult to separate using column chromatography. The partially purified material was taken to the next step without further purification. Yield: 30.0 mg (14.6%, impure).
(2S,3S,4S,5R,6S)-6-(((3R,5R,7R,8R,9S,10S,12S,13R,14S,17R)-17-((2R,5R,6S)-5,6-dihydroxyheptan-2-yl)-7,12-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-3-yl)oxy)-3,4,5-trihydroxytetrahydro-2H-pyran-2-carboxylic acid (1a). A solution of the partially purified glycosylated product 12 (30.0 mg, 0.025 mmol) in methanol (5.0 mL) was hydrogenated at RT using a balloon filled with hydrogen in the presence of 10%Pd/C (10.0 mg) for 20 h. The crude product was filtered off the catalyst and concentrated into a paste. It was redissolved in dioxane (5.0 mL) and refluxed with 1M LiOH (3.0 mL) for 6 h. The pH was adjusted to about 8.0 with AG® 1-X8 acid resin and filtered. The filtrate was purified by preparative HPLC [conditions: column—10 × 150 Waters C18 OBD; 10.0 micron; 130 Å solvent A—water; solvent B—methanol with 0.05% ammonium hydroxide; detection @ 210 nm; initial gradient—20% B for 5 min; 20–100% B over 50 min; elution rate—10.0 mL/min]. 3.0 mL fractions were collected and analyzed by LC/MS [conditions: Agilent Zorbax C8; 300 Å; 3.5 microns; 4.6 × 50 mm; solvent A—water; solvent B—5 mM ammonium acetate in methanol; gradient—50–100%B over 4.0 min and 3 more min at 100%B]. Fractions with the product were pooled and freeze died to yield the required product 1a as colorless fluffy solid. Yield: 8.0 mg, 52% for two steps). 1H NMR (400 MHz, CD3OD) δ 4.40 (d, J = 7.7 Hz, 1H), 3.96 (t, J = 2.9 Hz, 1H), 3.79 (m, 1H), 3.64 (m, 1H), 3.55 (m, 2H), 3.48–3.34 (m, 4H), 3.17 (m, 1H), 2.30 (m, 2H), 1.86 (m, 8H), 1.47 (m, 10H), 1.35–1.24 (m, 2H), 1.15 (d, J = 6.4 Hz, 3H), 1.10 (dt, J = 11.9, 6.0 Hz, 1H), 1.02 (d, J = 6.5 Hz, 3H), 0.91 (s, 3H), 0.71 (s, 3H). 13C NMR (101 MHz, CD3OD) δ 11.56, 16.58, 17.14, 21.67, 22.84, 26.11, 26.44, 27.39, 28.13, 28.99, 31.88, 34.39, 34.62, 34.81, 35.68, 37.00, 39.56, 41.59, 41.72, 46.04, 67.68, 70.48, 72.31, 72.72, 73.58, 74.83, 75.64, 76.41, 78.21, 100.45, 175.02. HRMS (ESI) calcd for C32H55O11 [M + H]+ 615.3745; found 615.3748

3.4.8. Synthesis of d4-Labeled Aglycone

3,7,12-Triacetyl cholic acid-d4 (13). Cholic acid-d4 (2.00 g, 1 Eq, 4.85 mmol) in pyridine (4.83 g, 4.94 mL, 12.6 Eq, 61.1 mmol) was cooled to 0 °C, and acetic anhydride (10.7 g, 9.92 mL, 21.7 Eq, 105 mmol) was added and stirred. DMAP (195 mg, 0.33 Eq, 1.60 mmol) was added to the reaction mixture and stirred at room temperature overnight. The reaction mixture was concentrated at room temperature under vacuum, diluted with ethyl acetate, washed three times with 1M HCL and water, and dried over MgSO4. The solution was filtered and concentrated, and the residue was chromatographed over flash silica gel. Elution with 60:40 hexanes:ethyl acetate yielded 15 (1.6 g, 3.0 mmol, 61%) as colorless gum. 1H NMR (400 MHz, CDCl3) δ 5.09 (s, 1H), 4.91 (d, J = 3.2 Hz, 1H), 4.56 (s, 1H), 2.39 (ddd, J = 15.3, 9.9, 5.0 Hz, 1H), 2.25 (ddd, J = 16.0, 9.6, 6.8 Hz, 1H), 2.14 (s, 3H), 2.11–2.02 (m, 8H), 2.02–1.91 (m, 2H), 1.88 (dd, J = 11.9, 7.4 Hz, 2H), 1.85–1.53 (m, 8H), 1.53–1.22 (m, 8H), 1.18–0.99 (m, 2H), 0.91 (s, 3H), 0.83 (d, J = 6.5 Hz, 3H), 0.73 (s, 3H).
(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-17-((R)-but-3-en-2-yl)-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triyl-2,2,4,4-d4 triacetate (14). Triacetyl cholic acid-d4, 13 (1.6 g, 1 Eq, 3.0 mmol) in anhydrous benzene (63 mL) was refluxed with pyridine (0.61 g, 0.62 mL, 2.6 Eq, 7.7 mmol), copper (II) acetate (0.47 g, 0.88 Eq, 2.6 mmol) and lead tetraacetate (11 g, 8.4 Eq, 25 mmol) under argon for 2 h. The reaction mixture was cooled, and 1N HCl was added to precipitate the excess lead. The salts were filtered and washed with benzene, and the combined filtrates were washed with water and 5% NaOH (aq) to remove unreacted starting material. The organic layer was dried over MagSO4, filtered, and evaporated into a paste. The residue was chromatographed over flash silica gel. Elution with 25% ethyl acetate in hexanes yielded 14 (0.5 g, 1 mmol, 30%) as colorless foam. 1H NMR (400 MHz, CDCl3) δ 5.70–5.56 (m, 1H), 5.09 (s, 1H), 4.95–4.86 (m, 2H), 4.83 (dd, J = 10.1, 1.9 Hz, 1H), 4.56 (s, 1H), 2.15 (s, 3H), 2.06 (d, J = 11.7 Hz, 7H), 2.00–1.82 (m, 2H), 1.81–1.59 (m, 6H), 1.58 (d, J = 10.2 Hz, 1H), 1.58–1.47 (m, 1H), 1.48 (d, J = 4.7 Hz, 1H), 1.40 (dd, J = 12.2, 8.0 Hz, 1H), 1.32–1.22 (m, 1H), 1.16–1.01 (m, 2H), 0.95–0.89 (m, 6H), 0.75 (s, 3H). 13C NMR (101 MHz, CDCl3) δ 170.50, 170.31, 144.39, 112.17, 77.19, 75.27, 75.25, 73.89, 70.72, 47.19, 45.03, 43.42, 40.79, 40.30, 37.76, 34.46, 34.31, 31.21, 29.01, 27.32, 25.62, 22.81, 22.55, 21.56, 21.46, 21.41, 19.55, 12.46.
24R,25S-bisbenzyl aglycone-2,2,4,4-d4 (15). Starting from alkene 14, aglycone 15 was synthesized in a similar manner as 10a–d.
2,2,4,4-d4-27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol (16). Starting from crude protected aglycone 15, aglycone 16 was synthesized in a similar manner as 2a. 1H NMR (400 MHz, CD3OD) δ 3.96 (t, J = 2.9 Hz, 1H), 3.79 (q, J = 3.0 Hz, 1H), 3.54 (qd, J = 6.3, 5.4 Hz, 1H), 3.34 (d, J = 1.5 Hz, 1H), 2.24 (td, J = 11.5, 6.5 Hz, 1H), 2.02–1.68 (m, 6H), 1.60–1.25 (m, 11H), 1.15 (d, J = 6.4 Hz, 3H), 1.14–1.05 (m, 1H), 1.02 (d, J = 6.4 Hz, 3H), 0.96 (d, J = 14.3 Hz, 1H), 0.91 (s, 3H), 0.72 (s, 3H). 13C NMR (101 MHz, CD3OD) δ 75.64, 72.69, 71.24, 70.48, 67.66, 46.04, 41.62, 41.57, 39.62, 35.66, 34.89, 34.44, 34.39, 31.88, 28.98, 28.17, 27.38, 26.48, 22.82, 21.73, 17.16, 16.58, 11.59. HRMS (ESI+, m/z): [M + Na]+ Calcd for C26H42D4O5Na [M + Na]+ 465.3594, found 465.3493

3.5. LCMS Methods

3.5.1. Detection of 27-Nor-5β-Cholestane-3α,7α,12α,24,25 Pentol Glucuronide in Urine Samples

Liquid chromatography/mass spectrometry analysis was performed on a Waters Acquity UPLC® coupled to a Waters Xevo Q-ToF quadruple time of flight mass spectrometer operating in electrospray ionization (ESI) in positive or negative mode. The capillary and sampling cone voltages were set to 3000 and 20 V, respectively. Source and desolvation temperatures were set to 120 °C and 450 °C, respectively, and the cone and desolvation gas flows were set to 50 and 800 L/hour, respectively. To maintain mass accuracy, leucine enkephalin was injected at a concentration of 200 pg/μL in 50% acetonitrile/water containing 0.1% formic acid at a rate of 10 μL/min. Data were acquired in continuum mode from 50 to 1000 m/z. The analytes were separated by reverse phase chromatography on an Acquity UPLC® BEH C18 (1.7 μm, 2.1 × 50 mm) column. Chromatographic separation was achieved with water (A) and acetonitrile (B) each containing 0.1% formic acid. Gradient elution, with a flow rate of 0.500 mL/min, began with an initial hold of 2% B for 0.5 min, then increased to 20% B from 0.5 to 4.0 min, 20–95% B from 4.0 to 8.0 min, 95–100% B from 8.0–8.10 min, hold for 1 min at 100%, then return to initial conditions (2% B) in 0.10 min. The column temperature was maintained at 40 °C in a column oven. Identification was performed in either positive (pseudomolecular ions) or negative mode (Table 1). Because the glucuronides readily fragment in ESI+ mode (Figure 4), it is recommended to use ESI− mode for identification and quantitation.

3.5.2. Resolution of C24,C25 Diastereomers of 27-Nor-5β-Cholestane-3α,7α,12α,24,25 Pentol in Urine Samples

Preparation of Urine Samples for Detection of 27-Nor-5β-Cholestane-3α,7α,12α,24,25 Pentol

50 μL of urine, 200 μL of 200 mM sodium acetate buffer (pH 3.8), and 5000 units of β-glucuronidase were incubated together for 4 h at 37 °C. The reaction was terminated by adding an equal volume of acetonitrile and centrifuged at 18,000× g for 20 min at 4 °C. A 20 μL sample was transferred to an LC/MS vial for analysis.

LC/MS Method for Resolution of C24,C25 Diastereomers 27-Nor-5β-Cholestane-3α,7α,12α,24,25 Pentol

Liquid chromatography/mass spectrometry analysis was performed on a Waters Acquity UPLC® coupled to a Waters Xevo Q-ToF quadruple time of flight mass spectrometer operating in electrospray ionization (ESI) in positive mode. The capillary and sampling cone voltages were set to 3000 and 20 V, respectively. Source and desolvation temperatures were set to 120 °C and 450 °C, respectively, and the cone and desolvation gas flows were set to 50 and 800 L/hour, respectively. To maintain mass accuracy, leucine enkephalin was injected at a concentration of 200 pg/μL in 50% acetonitrile/water containing 0.1% formic acid at a rate of 10 μL/min. Data were acquired in profile mode from 50 to 1200 m/z. The analytes were separated by reverse phase chromatography on a Phenomenex Synergi-Hydro (2.5 μm, 2.0 × 100 mm) column. Chromatographic separation was achieved with water (A) and acetonitrile (B) each containing 0.1% formic acid. Gradient elution, with a flow rate of 0.400 mL/min, began with an initial hold of 40% B for 0.3 min, increased to 50%B over 6 min, held for 0.65 min at 95%, then returned to initial conditions (40%B) in 0.10 min. The column temperature was maintained at 40 °C in a column oven. Due to significant amounts of insource fragmentation, analytes were identified using pseudomolecular ions m/z 385.3+, 403.3+, and 461.3+ (M + Na) and retention time.

4. Conclusions

An untargeted metabolomic study identified four features, including “561+”, as potential biomarkers for the early detection of lung cancer in urine. We isolated “561+” from human urine and tentatively identified it as 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronide of unknown C24,25 stereochemistry using 1H NMR and mass spectrometry. The four diastereomeric aglycones 2a–d were synthesized and resolved using LC/MS to determine the C24,25 stereochemistry. The treatment of human urine from lung cancer patients containing 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronide with β-glucuronidase released an aglycone with the 24R,25S stereochemistry and a small amount of 24S,25S, which is opposite to the reported C24,C25 stereochemistry in normal patients. We coupled 24R,25S aglycone to the glucuronide to complete the first reported synthesis of 27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol glucuronide (1a). The structure of “561+” was confirmed as 1a by LCMS. The d4-labeled aglycone 16 was also prepared to assist with mass spectrometry quantitation.
Our C24,25 assignments are opposite to those reported by Une and coworkers [12]. However, the identification of the C24 position as R agrees with the reported C24 stereochemistry of the structurally related bile alcohol, 5β-Ranol, the major bile constituent of the bullfrog Rana catesbeina [29]. The biochemical origin of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol is unknown but mostly likely involves the alternative or aberrant pathway for the biosynthesis of bile acids [30]. In this pathway, Dayal [31] has shown that 3α,7α,12α,25-cholestane-5β-tetrol is converted to a mixture of 24R and 24S 3α,7α,12α, 24,25-cholestane-5β-tetrols, with the 24R isomer being predominant. Only the 24R tetrol is converted to cholic acid, resulting in the detection of 3α,7α,12α, 24S,25-cholestane-5β-tetrol in the urine and bile of patients with cerebrotendinous xanthomatosis (CTX) disease [31]. It is possible that metabolic changes that occur with lung cancer prevent the conversion of 27-nor-5β-cholestane-3α,7α,12α,24R,25S pentol to cholic acid, causing it to be excreted as glucuronide. Additional studies are needed to understand the biochemical pathways involved.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/molecules29122781/s1, 1H and 13C spectra for prepared compounds.

Author Contributions

Conceptualization, C.H. and R.E.S.; funding acquisition, C.H.; investigation, B.B., N.R., C.M., K.L. and D.P.; methodology, B.B., N.R. and C.M.; project administration, B.B.; supervision, C.H. and R.E.S.; writing—original draft, B.B.; writing—review and editing, B.B. All authors have read and agreed to the published version of the manuscript.

Funding

This research was supported by the Intramural Research Program of the NIH, NCI/CCR.

Institutional Review Board Statement

Not Applicable.

Informed Consent Statement

Not Applicable.

Data Availability Statement

The original contributions presented in the study are included in the article/supplementary material, further inquiries can be directed to the corresponding authors. In addition, they are openly available in Figshare (https://figshare.com): DOI: 10.25444/nhlbi.25733652.

Conflicts of Interest

The authors declare no conflicts of interest.

References

  1. Siegel, R.L.; Miller, K.D.; Fuchs, H.E.; Jemal, A. Cancer Statistics, 2021. CA A Cancer J. Clin. 2021, 71, 7–33. [Google Scholar] [CrossRef]
  2. Haznadar, M.; Cai, Q.; Krausz, K.W.; Bowman, E.D.; Margono, E.; Noro, R.; Thompson, M.D.; Mathe, E.A.; Munro, H.M.; Steinwandel, M.D.; et al. Urinary Metabolite Risk Biomarkers of Lung Cancer: A Prospective Cohort Study. Cancer Epidemiol. Biomark. Prev. 2016, 25, 978–986. [Google Scholar] [CrossRef]
  3. Kuwabara, M.; Ushiroguchi, T.; Kihira, K.; Kuramoto, T.; Hoshita, T. Identification of bile alcohols in urine from healthy humans. J. Lipid Res. 1984, 25, 361–368. [Google Scholar] [CrossRef]
  4. Ichimiya, H.; Yanagisawa, J.; Nakayama, F. Significance of Bile Alcohol in Urine of a Patient with Cholestasis: Identification of 5beta-Cholestane-3alpha,7alpha,12alpha,26,27-pentol (5beta-Cyprinol) and 5beta-Cholestane-3alpha,7alpha,12alpha,26-tetrol (27-Deoxy-5beta-cyprinol). Chem. Pharm. Bull. 1984, 32, 2874–2877. [Google Scholar] [CrossRef]
  5. Karlaganis, G.; Karlaganis, V.; Sjövall, J. Identification of 27-nor-5 beta-cholestane-3 alpha,7 alpha,12 alpha,24 xi, 25 xi,26-hexol and partial characterization of the bile alcohol profile in urine. J. Lipid Res. 1984, 25, 693–702. [Google Scholar] [CrossRef]
  6. Ludwig-Köhn, H.; Henning, H.V.; Sziedat, A.; Mattael, D.; Spiteller, G.; Reiner, J.; Egger, H.J. The identification of urinary bile alcohols by gas chromatography–mass spectrometry in patients with liver disease and in healthy individuals. Eur. J. Clin. Investig. 1983, 13, 91–98. [Google Scholar] [CrossRef]
  7. Kuroki, S.; Shimazu, K.; Kuwabara, M.; Une, M.; Kihira, K.; Kuramota, T.; Hoshita, T. Identification of bile alcohols in human bile. J. Lipid Res. 1985, 26, 230–240. [Google Scholar] [CrossRef]
  8. Nakagawa, M.; Une, M.; Takenaka, S.; Tazawa, Y.; Nozaki, S.; Imanaka, T.; Kuramota, T. Urinary bile alcohol profiles in healthy and cholestatic children. Clin. Chim. Acta 2001, 314, 101–106. [Google Scholar] [CrossRef]
  9. Dayal, B.; Tint, G.S.; Toome, V.; Batta, A.K.; Shefer, S.; Salen, G. Synthesis and structure of 26 (or 27)-nor-5β-cholestane-3α,7α,12α,24S,25ξ-pentol isolated from the urine and feces of a patient with sitosterolemia and xanthomatosis. J. Lipid Res. 1985, 26, 298–305. [Google Scholar] [CrossRef]
  10. Chen, J.; Zhang, X.; Cao, R.; Lu, X.; Zhao, S.; Fekete, A.; Huang, Q.; Schmitt-Kopplin, P.; Wang, Y.; Xu, Z.; et al. Serum 27-nor-5beta-cholestane-3,7,12,24,25 pentol glucuronide discovered by metabolomics as potential diagnostic biomarker for epithelium ovarian cancer. J. Proteome Res. 2011, 10, 2625–2632. [Google Scholar] [CrossRef]
  11. Xu, G.; Chen, J.; Xu, C.; Cao, R.; Lu, X.; Zhang, X.; Wang, Y. Kit for Detecting 27-nor-5B-cholestane-3,7,12,25 Pentol Glucuronide in Serum and Using Method Thereof. WO20111140800A1, 17 November 2011. [Google Scholar]
  12. Une, M.; Takenaka, S.; Kuramota, T.; Fujimura, K.; Hoshita, T.; Kihira, K. Structural and biosynthetic studies of a principal bile alcohol, 27-nor-5β-chlolestane-3α,7α,12α,24,25 pentol, in human urine. J. Lipid Res. 2000, 41, 1562–1567. [Google Scholar] [CrossRef] [PubMed]
  13. Bhattarai, K.M.; Davis, A.P.; Perry, J.J.; Walter, C.J.; Menzer, S.; Williams, D.J. A New Generation of “Cholaphanes”:  Steroid-Derived Macrocyclic Hosts with Enhanced Solubility and Controlled Flexibility. J. Org. Chem. 1997, 62, 8463–8473. [Google Scholar] [CrossRef] [PubMed]
  14. Kenji, K.; Taiju, K.; Takahiko, H. New Bile Alcohols—Synthesis of (22R)- and (22S)-5β-Cholestane-3α,7α,12α,22,25-pentols. Steroids 1976, 27, 383–393. [Google Scholar] [CrossRef] [PubMed]
  15. Kammertoens, K.; Quancard, J.; Schlapbach, A.; Simic, O.; Tintelnot-Blomley, M.; Woollam, G. Novel Pyrazolo Pyrimidine Derivatives. WO2017081641, 18 May 2017. [Google Scholar]
  16. Chatterjee, A.K.; Sanders, D.P.; Grubbs, R.H. Synthesis of Symmetrical Trisubstituted Olefins by Cross Metathesis. Org. Lett. 2002, 4, 1939–1942. [Google Scholar] [CrossRef]
  17. Jin, J.; Chen, Y.; Li, Y.; Wu, J.; Dai, W.-M. Total Synthesis of Amphidinolide Y by Formation of Trisubstituted (E)-Double Bond via Ring-Closing Metathesis of Densely Functionalized Alkenes. Org. Lett. 2007, 9, 2585–2588. [Google Scholar] [CrossRef] [PubMed]
  18. Kihira, K.; Kosaka, D.; Une, M.; Hiraoka, T.; Kajiyama, G.; Hoshita, T. Syntheses of deuterium-labeled bile alcohols. J. Label. Compd. Radiopharm. 1987, 24, 1421. [Google Scholar] [CrossRef]
  19. Aidhen, I.S.; Satyamurthi, N. Synthesis of a stable, storable and differentially protected acyclic precursor of D-amicetose and its conversion to 4-O-benzyl-protected D-amicetose. Indian J. Chem. 2008, 47B, 1851–1857. [Google Scholar] [CrossRef]
  20. Ley, S.V.; Dixon, D.J.; Guy, R.T.; Palomero, M.A.; Polara, A.; Rodriguez, F.; Sheppard, T.D. Studies on the generation of enolate anions from butane-2,3-diacetal protected glycolic acid derivatives and subsequent highly diastereoselective coupling reactions with aldehydes and acid chlorides. Org. Biomol. Chem. 2004, 2, 3618–3627. [Google Scholar] [CrossRef]
  21. Mahalingam, S.M.; Sathyamurthi, N.; Aidhen, I.S. Simple and highly convenient two-step practical procedure for the synthesis of optically pure methyl D-erythro-2,3-dihydroxybutanoate. Adv. Synth. Catal. 2005, 347, 715–717. [Google Scholar] [CrossRef]
  22. Huang, J.; Corey, E.J. A Mechanistically Guided Design Leads to the Synthesis of an Efficient and Practical New Reagent for the Highly Enantioselective, Catalytic Dihydroxylation of Olefins. Org. Lett. 2003, 5, 3455–3458. [Google Scholar] [CrossRef]
  23. Corey, E.J.; Jardine, P.D.; Virgil, S.; Yuen, P.W.; Connell, R.D. Enantioselective vicinal hydroxylation of terminal and E-1,2-disubstituted olefins by a chiral complex of osmium tetroxide. An effective controller system and a rational mechanistic model. J. Am. Chem. Soc. 1989, 111, 9243–9244. [Google Scholar] [CrossRef]
  24. Hatakeyama, S.; Sakurai, K.; Takano, S. Enantio- and Stereoselective Synthesis of 2,6-Dideoxyhexoses from Divinylcarbinol. Tetrahedron Lett. 1986, 27, 4485. [Google Scholar] [CrossRef]
  25. Ajdacic, V.; Nikolic, A.; Kerner, M.; Wipf, P.; Opsenica, I.M. Reevaluation of the Palladium/Carbon-Catalyzed Decarbonylation of Aliphatic Aldehydes. Synlett 2018, 29, 1781–1785. [Google Scholar]
  26. Omura, K.; Adachi, Y.; Kobayashi, Y.; Sekiguchi, S.; Zhou, B.; Iida, T. Chemical Synthesis of the Epimeric (23R)- and (23S)-Fluoro Derivatives of Bile Acids via Horner-Wadsworth-Emmons Reaction. Lipids 2015, 50, 919–926. [Google Scholar] [CrossRef]
  27. Omura, K.; Ohsaki, A.; Zhou, B.; Kushida, M.; Mitsuma, T.; Kobayashi, A.; Hagey, L.R.; Hofmann, A.F.; Iida, T. Improved Chemical Synthesis, X-Ray Crystallographic Analysis, and NMR Characterization of (22R)-/(22S)-Hydroxy Epimers of Bile Acids. Lipids 2014, 49, 1169–1180. [Google Scholar] [CrossRef]
  28. Tochtrop, G.P.; DeKoster, G.T.; Cistola, D.P.; Covey, D.F. A Simple Efficient Synthesis of [23,24]-13C2-Labeled Bile Salts as NMR Probes of Protein-Ligand Interactions. Bioorg. Med. Chem. Lett. 2002, 12, 433–435. [Google Scholar] [CrossRef]
  29. Kihira, K.; Noma, Y.; Tsuda, K.; Watanabe, T.; Yamamoto, Y.; Une, M.; Hoshita, T. Absolute configuration at C-24 of 5 beta-ranol, a principal bile alcohol of the bullfrog. J. Lipid Res. 1988, 27, 393–397. [Google Scholar] [CrossRef]
  30. Sarenac, T.M.; Mikov, M. Bile Acid Synthesis: From Nature to the Chemical Modification and Synthesis and Their Applications as Drugs and Nutrients. Front. Pharmacol. 2018, 9, 939. [Google Scholar] [CrossRef]
  31. Shefer, S.; Cheng, F.W.; Dayal, B.; Hauser, S.; Tint, G.S.; Salen, G.; Mosbach, E.H. A 25-hydroxylation pathway of cholic acid biosynthesis in man and rat. J. Clin. Investig. 1976, 57, 897–903. [Google Scholar] [CrossRef] [PubMed]
Molecules 29 02781 sch001
Scheme 1. Retrosynthetic analysis for 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronides 1a–d.
Scheme 1. Retrosynthetic analysis for 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol glucuronides 1a–d.
Molecules 29 02781 sch001
Molecules 29 02781 sch002
Scheme 2. Synthesis of chiral alkene 5a.
Scheme 2. Synthesis of chiral alkene 5a.
Molecules 29 02781 sch002
Molecules 29 02781 sch003
Scheme 3. Synthesis of chiral aglycone 2a from intermediate 4 [13,14] which is derived from cholic acid.
Scheme 3. Synthesis of chiral aglycone 2a from intermediate 4 [13,14] which is derived from cholic acid.
Molecules 29 02781 sch003
Molecules 29 02781 g001
Figure 1. ESI+ mass spectrum of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol. Pseudomolecular ion m/z = 385.3+ used for detection and quantitation is marked with an asterisk (*). The peaks marked with an arrow are additional fragment ions derived from the parent molecular ion m/z = 439.3+ ([M + H]+).
Figure 1. ESI+ mass spectrum of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol. Pseudomolecular ion m/z = 385.3+ used for detection and quantitation is marked with an asterisk (*). The peaks marked with an arrow are additional fragment ions derived from the parent molecular ion m/z = 439.3+ ([M + H]+).
Molecules 29 02781 g001
Molecules 29 02781 g002
Figure 2. Stereochemistry of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol released from human urine treated with β-glucuronidase. ESI+ mass extracted chromatograms at m/z 358.5+. (A) Untreated urine. (B) Urine treated with β-glucuronidase. (C) Mixture of the four diastereoisomeric aglycones 2a–d.
Figure 2. Stereochemistry of 27-nor-5β-cholestane-3α,7α,12α,24,25 pentol released from human urine treated with β-glucuronidase. ESI+ mass extracted chromatograms at m/z 358.5+. (A) Untreated urine. (B) Urine treated with β-glucuronidase. (C) Mixture of the four diastereoisomeric aglycones 2a–d.
Molecules 29 02781 g002
Molecules 29 02781 sch004
Scheme 4. Synthesis of 1a.
Scheme 4. Synthesis of 1a.
Molecules 29 02781 sch004
Molecules 29 02781 g003
Figure 3. Comparison of LCMS retention times between “561+” in urine vs. standard 1a. (A) ESI-extracted mass chromatograms at m/z = 613.34+ (M − H). (B) ESI+ extracted mass chromatograms at m/z = 615.34 (M + H).
Figure 3. Comparison of LCMS retention times between “561+” in urine vs. standard 1a. (A) ESI-extracted mass chromatograms at m/z = 613.34+ (M − H). (B) ESI+ extracted mass chromatograms at m/z = 615.34 (M + H).
Molecules 29 02781 g003
Molecules 29 02781 g004
Figure 4. Identification of “561+”. (A) ESI− mass spectrum; (B) ESI+ mass spectrum. Peaks marked with an asterisk (*) are fragment ions derived from m/z 615.3+; (C) ESI+ MS/MS of m/z 615.34.
Figure 4. Identification of “561+”. (A) ESI− mass spectrum; (B) ESI+ mass spectrum. Peaks marked with an asterisk (*) are fragment ions derived from m/z 615.3+; (C) ESI+ MS/MS of m/z 615.34.
Molecules 29 02781 g004
Molecules 29 02781 sch005
Scheme 5. Synthesis of 16.
Scheme 5. Synthesis of 16.
Molecules 29 02781 sch005
Table 1. ESI+ and ESI− ions used for identification and quantitation of 27-nor-5β-Cholestane-3α,7α,12α,24,25 pentol glucuronide.
Table 1. ESI+ and ESI− ions used for identification and quantitation of 27-nor-5β-Cholestane-3α,7α,12α,24,25 pentol glucuronide.
CompoundMolecular FormulaExact MassPositive Quantitation Ion(s)
(Pseudomolecular Ions)		Negative Quantitation Ion, M-H
27-nor-5β-Cholestane-3α,7α,12α,24,25 pentol glucuronideC32H54O11614.3666385.3, 403.3, 561.3, 579.3, 597.3613.3
27-nor-5β-Cholestane-3α,7α,12α,24,25 pentol glucuronide-2,2,4,4-d4C32H50D4O11618.3917389.3, 407.3, 565.3, 583.3, 601.3 617.3
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Blackman, B.; Raju, N.; Mushti, C.; Lane, K.; Patel, D.; Harris, C.; Swenson, R.E. Isolation and Identification of a Urinary Biomarker for Lung Cancer: 27-Nor-5β-Cholestane-3α,7α,12α,24R,25S Pentol Glucuronide and Its Deuterated Analog. Molecules 2024, 29, 2781. https://doi.org/10.3390/molecules29122781

AMA Style

Blackman B, Raju N, Mushti C, Lane K, Patel D, Harris C, Swenson RE. Isolation and Identification of a Urinary Biomarker for Lung Cancer: 27-Nor-5β-Cholestane-3α,7α,12α,24R,25S Pentol Glucuronide and Its Deuterated Analog. Molecules. 2024; 29(12):2781. https://doi.org/10.3390/molecules29122781

Chicago/Turabian Style

Blackman, Burchelle, Natarajan Raju, Chandrasekhar Mushti, Kelly Lane, Daxeshkumar Patel, Curtis Harris, and Rolf E. Swenson. 2024. "Isolation and Identification of a Urinary Biomarker for Lung Cancer: 27-Nor-5β-Cholestane-3α,7α,12α,24R,25S Pentol Glucuronide and Its Deuterated Analog" Molecules 29, no. 12: 2781. https://doi.org/10.3390/molecules29122781

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