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Article

Transmission of Cryphonectria Hypovirus 1 (CHV1) to Cryphonectria radicalis and In Vitro and In Vivo Testing of Its Potential for Use as Biocontrol Against C. parasitica

1
Forest Research, Plant Pathology Department, Alice Holt Lodge, Wrecclesham GU104LH, Surrey, UK
2
Institute of Forest Protection and Wildlife Management, University of Zagreb Faculty of Forestry and Wood Technology, Svetošimunska Cesta 23, 10000 Zagreb, Croatia
3
Forest Research, Tree Health Diagnostics and Advisory Service (THDAS), Alice Holt Lodge, Wrecclesham GU104LH, Surrey, UK
*
Author to whom correspondence should be addressed.
Int. J. Mol. Sci. 2024, 25(22), 12023; https://doi.org/10.3390/ijms252212023
Submission received: 15 October 2024 / Revised: 4 November 2024 / Accepted: 6 November 2024 / Published: 8 November 2024
(This article belongs to the Special Issue Biocontrol of Plant Diseases and Insect Pests)

Abstract

:
Cryphonectria hypovirus 1 (CHV1) is successful in controlling Cryphonectria parasitica, the causal agent of chestnut blight, but little is known regarding its transmission to other fungi, for example the European Cryphonectria radicalis. In this study, CHV1 was transmitted (circa 200,000–800,000 copies/microliter) to seven C. radicalis isolates from infected C. parasitica. Reverse transmission to virus-free C. parasitica (European 74 testers collection) was achieved, although it was less successful (250–55,000 copies/µL) and was dependent on the vegetative compatibility (VC) group. In C. radicalis, the virus infection led to colony colour change from pink to white and smaller colonies, dependent on the virus concentration. The virus was concentrated in the colony edges, and vertically transmitted to 77% of conidia. However, several in vitro experiments demonstrated that C. radicalis was always outcompeted by the blight fungus, only suppressing the pathogen between its 25–50% inoculum level. It presented good secondary capture only when acting as a pioneer. Two types of in planta assays (individual and challenge inoculations) were undertaken. Cryphonectria radicalis behaved as a saprotroph, while chestnut blight fungus behaved as an aggressive pathogen, and lesions after treatment with C. radicalis were no smaller in general, only when using cut branches. Overall, the results showed that infected C. radicalis was unable to control cankers.

1. Introduction

Chestnut blight caused by the fungus Cryphonectria parasitica (Murrill) M. E. Barr. was first introduced from Asia into North America in the late nineteenth century, with a first outbreak in the New York Zoo, killing over 3.5 billion American chestnut trees (Castanea dentata (Marsh.) Borkh.) in 50 years [1], almost leading to the extinction of this highly susceptible tree species. In Europe, it was first observed on the susceptible sweet chestnut (Castanea sativa Mill.) in Italy in 1938 [2], and since then, the pathogen has been introduced multiple times to most continental European countries [3] and England [4,5,6,7,8,9,10]. Symptoms include crown dieback, rapid-growing cankers on the trunk and/or branches, epicormic growth below cankers, orange fungal sporulation erupting through swollen lenticels, and often whitish, pale mycelial fans beneath the bark.
Cryphonectria hypovirus 1 (CHV1) is a type of virus belonging to the Hypoviridae family [11,12]. Hypoviruses are RNA viruses located in the cytoplasm membrane vesicles of their fungal hosts, without a coat protein, which replication form is dsRNA [13] and their main mode of transmission to other isolates/fungi occurs horizontally via hyphal anastomosis and vertically via conidia. Cryphonectria hypovirus 1 acts as a biocontrol agent of chestnut blight in Europe and some parts of North America (Virginia, Wisconsin, Maryland), and it is released there because it causes reduced C. parasitica growth, pigmentation, sporulation, and virulence [14].
In England, CHV1 was detected for the first time in November 2017 [6] and since then, low levels of the presence and concentration of this virus have been recorded in the environment. Some isolates collected in England have been subsequently infected by a high concentration of CHV1 through transmissions [8,9] from highly infected C. parasitica isolates from continental Europe of the same/most proximate VCG. As a result of these transmissions, Forest Research now hold a bank of hypovirulent isolates suitable for deployment in field trials on infected sites. However, their deployment in England is subject to regulatory consent, which is still to be received, due to C. parasitica being a regulated quarantine pest (even in its attenuated form when infected with the hypovirus). The complicated regulatory position, and the general high diversity of the vegetative compatibility types of C. parasitica in England [6], are likely to make the effective biocontrol of C. parasitica in Britain challenging. Therefore, there is a need for a more comprehensive knowledge of other potential biocontrol agents which could potentially serve as alternative ‘vehicles’ for the virus, to aid effective management of the disease.
Considering this, a few Cryphonectria radicalis (Schw. ex Fries) Barr. [15] isolates were found to be naturally infected with the virus in a previous study in England [7]. The tasks of the present study were: (i) transmit the mycovirus during horizontal transmission assays into seven isolates of C. radicalis, the closely related saprotrophic (or very mild pathogen) native (European lineage) species; (ii) investigate the impacts of this mycovirus infection on C. radicalis fungal phenotype; and (iii) determine both in vitro and in planta the competitive interactions between the fungus C. parasitica and the infected and non-infected C. radicalis isolates.

2. Results

2.1. Isolates

Most of the fungal cultures obtained from lesions, during Forestry Commission surveillance for C. parasitica, represented isolates of C. parasitica (511 isolates). However, the non-pathogenic native species, C. radicalis, was confirmed as well (29 isolates). These twenty-nine C. radicalis isolates are indicated in Table 1, some of which were preserved and used in this study.

2.2. Transmissions

CHV1 was initially transmitted from C. parasitica isolate WAR706, gained by past transmissions [8], into C. radicalis isolate ABB154 (which previously tested negative for the virus) with a final concentration of 333,833.11 viral copies per microliter (Table 2). Absence of traces of the C. parasitica donor in the final C. radicalis colony, subcultured from the most distal part of the recipient culture, was proven by negative results from dual hydrolysis real-time PCR for C. parasitica [16], while the 1:10 to 1:10,000 positive controls amplified well.
From the infected isolate ABB154, C. radicalis, the virus was transmitted to other six un-infected C. radicalis cultures with final concentrations ranging between circa 200,000 to nearly 800,000 viral copies per microliter (Table 3).
When crossing back to a collection of C. parasitica VCGs (EU1 to EU74), each highly infected C. radicalis culture transmitted the virus predominantly to only one VCG indicated in Table 4. Virus loads differed with the most successful transmission from FRA135 to EU62 (final concentration circa 55,000 copies/µL). The least successful was from BOS158 to EU9 (only 250 copies/µL).
We detected that EU16 harbors itself the mycovirus because it was positive among all crosses, and because it was positive after obtaining a new EU16 plug from −80 °C which was positive for the CHV1 virus following the same molecular procedure and timings explained in material and methods.

2.3. Colony Colour, Area, Colony Parts, Conidiation and Conidia Transmission

The CHV1 mycovirus infection of seven C. radicalis isolates led to colony colour change from pink to white, passing through an intermediate stage between colours (Figure 1). Cycle threshold (Ct) value negatively correlated with colony colour (Pearson correlation coefficient −0.855, p < 0.0001) (Table 5). As Ct values increased, the binary notation system decreased (0 pink, 1 intermediate, 2 white). The loss of colony colour (pink pigment) was also negatively correlated with colony growth area. White colonies (without the pigment) expressed the smallest growth (Pearson correlation coefficient −0.737, p < 0.0001).
Ct value also negatively correlated with colony type (0, non-infected control, 1 subbed from the centre, 2 subbed from the edge) meaning that the virus was more concentrated in the youngest parts of the colony at the edge than in the centre (Pearson correlation coefficient −0.830, p < 0.0001) (Table 5). Convergently, with lower Ct values, the colonies were smaller in area (Pearson correlation coefficient 0.843, p < 0.0001) (Table 5).
CHV1 infection did not affect C. radicalis sporulation rate in a significant manner (Pearson correlation coefficient 0.374, p = 0.095) (Table 5).
However, the virus was present in C. radicalis conidia. Indeed around 77% of the single spore cultures of C. radicalis obtained harboured the virus with a relatively high viral concentration (Table 6). The isolates that provided the most vertical transmission in this way were LES358 and LES362, while BHE156 only transmitted the virus to 40% of its conidia.

2.4. Competition

Overall, at the end of the whole experiment, Cryphonectria parasitica always outcompeted C. radicalis (Relative Crowding Coefficients > 1) (Figure 2). The RCC was always greater when using uninfected controls of C. radicalis. The fact that, during this trial, LES362 contained the highest concentration of CHV1 and thus would be slower growing, may explain why C. parasitica outcompeted this isolate slightly better than the less-infected BOS158.
Cryphonectria radicalis outcompeted the pathogen at the more favourable pathogen ratios of 50% and below (LES362), and 25% and below (BOS158). The standard error bars where the lines intersect (Figure 2) were always shorter when using infected C. radicalis, which might be explained by a degree of virus transmission occurring, especially when using BOS158 which has earlier been shown to be compatible with the competing C. parasitica culture (WAR706, VCG EU9).

2.5. Primary Capture

The area of new substrate colonised by each fungus in pairwise combinations was always smaller than the area occupied by the same fungus grown in isolation (t-test always significant) (Figure 3), except in the case of virus-infected BOS158 for which there were no differences in C. parasitica (WAR706, VCG EU9) growing alone or in combination (Figure 3G, t = 1.65, p = 0.15) or BOS 158 growing alone or in combination (Figure 3H, t = 2.17, p = 0.08).

2.6. Secondary Capture

When acting as a pioneer, C. radicalis almost totally outcompeted chestnut blight fungus (Figure 4F), more when it was virus-free (Figure 4G–J). However, when acting as a competitor, it was always almost totally overgrown by C. parasitica (Figure 4A–E).

2.7. Relative Virulence

At the end of the trial, all the branch segment material was dead (Table S1). The presence and number of epicormic shoots increased with the lesion area. The presence of perithecia increased with the presence of stromata. Perithecia presence was associated with certain C. radicalis isolates (ABB154, LES358, BOS157, BOS158). The lesion area of virus-free C. parasitica (WAR706, EU9) was significantly greater than all the other isolates tested. The lesion area of all C. radicalis isolates were not significantly different from the controls (Figure 5).
Although all saplings were also dead by the end of the experiment, neither stromata nor perithecia were observed in the saplings (Table S1). A similar virulence pattern was observed to the branch segment trial, although virus-free C. parasitica lesion areas were smaller in the sapling trial (Figure 5). In a split-plot by isolate (Figure 6), there were no significant differences in virulence among any of the C. radicalis infected isolates and their respective virus-free controls, which provides further evidence that CHV1 infection does not induce a reduction of virulence in C. radicalis, in contrast with the effect it induces in C. parasitica.

2.8. Biocontrol Potential

The results of Assay II are represented in Table S2 and Figure 7.
Not all the branch segments were dead by the end of this experiment. Branch death frequency, and the presence of stromata increased with the lesion area (Table S2). In the challenge treatment using isolate BOS157, the lesion area was larger than those of the control (Figure 8), while four isolate treatments (LES358, LES362, BOS158 and BHE156) resulted in smaller lesions than the control.
Most, but not all saplings were dead at the end of the trial, but perithecia were never observed. Although virus concentration in C. radicalis was negatively correlated to the lesion area induced by C. parasitica, there were no significant differences in the lesion area observed between the virus-infected isolate treatments and the PDA control (Figure 7).
After repeating the same procedure but only using targeted VC-groups (see Table 4 for the respective selected combinations), the results are represented in Table S3 and Figure 8. In this case, the branch segments, after the same time, were still alive in some parts, and the saplings were chlorotic but predominantly alive. The branches treated with all virus-infected C. radicalis isolates had smaller lesion areas than the controls (Figure 8), but there were no significant differences when considering the saplings. There were several logical relationships found in the branch segments. For example, there were positive correlations between the lesion area and dead/alive status and the presence of stromata. It was also observed here that as the inoculum viral concentration increased, the more likely the branches were to be partially alive.

3. Discussion

Cryphonectria hypovirus 1 is known to induce hypovirulence in C. parasitica by reducing its growth, colour, sporulation and subsequent virulence when infecting both cut branches and saplings [8]. Therefore, the virus is used in Europe and some parts of the USA (inoculated in Virginia, Wisconsin, and Maryland) for chestnut blight control [14]. The virus has been introduced into continental Europe, and the UK (detected in England by Forest Research for the first time in November 2017), often associated with C. parasitica from countries in eastern Asia [17,18,19], known to be the geographical origin of the fungus. Those introductions are most likely to have occurred through trade in chestnut tree planting material within Europe and/or the importation of Asiatic planting stock often intended for use in resistance breeding programmes against the chestnut ink disease caused by Phytophthora x cambivora and Phytophthora cinnamomi. Six genetically distinct CHV1 subtypes have been identified in Europe (I, D, E, F1, F2 and G) [20,21]. Subtype I (also known as the Italian subtype), which is the only subtype that has been detected in England [6,7] (haplotype E-5 as used in the present study), is the most widespread due to its mild hypovirulence.
The VCG system in C. parasitica modulates CHV1 transmission by hyphal recognition and anastomosis, and thus determines the outcome of an epidemic [22]. It is regulated by six vic genes each with two possible alleles [23]. The VCG of a C. parasitica isolate causing canker on a tree must be determined before inoculating in the field with a hypovirulent isolate of a compatible VC group [14].
The main objective of this study was to determine the possibility and biological effects of transmitting CHV1 to C. radicalis, a possibility that was suspected to be feasible since its detection in two apparently naturally infected C. radicalis isolates in 2019 and 2020 in the London area [7]. In those two isolates, probably due to their low viral concentration (around 10–20 ng/µL only), there were no obvious phenotypic differences between CHV1-infected and isogenic CHV1-free isolates, gained by single spore culturing, of C. radicalis isolated from the wider environment. There is a certain level of CHV1 virus flow between the two species (C. parasiticaC. radicalis), like that of CHV1 between C. parasitica and C. nitschkei, sympatric in chestnut trees in East Asia [24].
However, after experimental interspecific cross-transfer to new recipient isolates (this study), CHV1 was quite easily transmitted vertically via around 77% asexual spores and horizontally to other strains of C. radicalis via hyphal contact and anastomosis.
CHV1-infected C. radicalis isolates exhibited a higher load of the virus in the younger colony parts (edges), reduced growth, and reduced colour phenotype, depending on virus concentration. Sectorial reduced growth has been shown in other fungi infected by different mycoviruses, e.g., Beauveria bassiana [25], Colletotrichum fructicola [26], Cryphonectria carpinicola [27], Cryphonectria parasitica [14], Macrophomina phaseolina [28], Fusarium equiseti [29]. To the best of our knowledge, this is the first successful transmission of CHV1 from C. parasitica to C. radicalis by co-cultivation [30]. In contrast, in previous transmissions to C. radicalis of other mycoviruses such as CnFGV1 (Cryphonectria naterciae FusagraVirus 1), the mycelium morphology and growth rate of virus-infected strains were unaffected compared to the virus-free isogenic strains [27].
The reverse transmission back to C. parasitica proved to be very difficult, and the in vitro and in planta results showed that infected C. radicalis isolates were unable to control cankers and are not suitable as biocontrol agents, at least when using chestnut saplings. In the cut branch assay, there were some promising results but until a proper characterisation method is developed of the vegetative incompatibility system in C. radicalis, we cannot conclude much more. Such future work would require sequence data generation from the different C. radicalis vic loci and the design of specific primers and sensitivity testing. Also, it would be interesting to determine the mating type system in C. radicalis because some isolates in the present study (directly producing perithecia during the plant trials) could be heterokaryons regarding mating types.
Future research should also focus on the secondary capture capabilities of C. radicalis when acting as a pioneer in chestnut plant material. It could potentially be used as a preventative treatment, for instance on neighbouring trees or in a woodland following removal of an infected tree, even if it cannot be used as a treatment for a tree if it is already infected.
Until then, the biocontrol potential of the CHV1-infected British isolates of C. parasitica was experimentally verified again and found to be dependent on the inoculum compatibility and on the virus concentration, both when using saplings and branches. The consistency of the plant material and the controlled conditions used in our assays gave us high confidence in our observations and the conclusions that could be drawn from the data in relation to the efficacy of those artificially (by previous co-culture [8]) infected English isolates. The unsuitability of CHV1-infected C. radicalis to act as an effective biocontrol agent against C. parasitica further highlights the need for exploration of the field biocontrol capabilities of hypovirulent C. parasitica isolates in the UK. This remains the only known biocontrol option with potential.

4. Materials and Methods

4.1. Sampling, Isolation and Preservation

Around 80 sites were intensively surveyed by the Forestry Commission from January 2017 to March 2024 in southern and mid-England (UK).
In the field, C. sativa trees were examined for the presence of typical blight symptoms. Edges of lesions were sampled by lifting small sections of the bark with a sharp chisel. Bark panels (5 × 8 cm2) were excised at the margin of each lesion. Bark samples were doubled-bagged and labelled with their Ordnance Survey (OS) grid coordinates.
In the laboratory, the panels were surface disinfected with 70% ethanol and isolations from the edge of lesions made onto 2% malt extract agar (MEA, 20 g/L malt extract, Oxoid, Basingstoke, UK) amended with 0.25 g/L of streptomycin sulphate salt (Sigma-Aldrich (St. Louis, MO, USA), (MA+S)). After 4 days at 20 °C in the dark, colonies were transferred to potato dextrose agar (PDA; 39 g/L potato dextrose, Oxoid) and incubated at 25 °C for 7 days before they were identified by ITS1-5.8S-ITS2 rDNA sequencing and sequences deposited in NCBI GenBank. Six plugs of each representative isolate were deposited in mapped triplicate cryotubes at the THDAS culture collection at −80 °C in 800 µL glycerol 22%, after first vortexing and flash-freezing the filled tubes through liquid nitrogen.

4.2. Direct and Reverse Transmissions of the CHV1 Virus

Initially, there was an attempt to transmit the CHV1 virus from the three highly infected C. parasitica isolates FTC687 (EU10, 415.95 ng/µL), WAR706 (EU9, 428.41 ng/µL) [8] and HYD574 (EU2, 588.52 ng/µL), gained indeed by past transmissions, into nine (ABB154, LES358, LES362, FRA135, BOS157, BOS158, BHE156, HAY113, and BOS159) isolates of C. radicalis (previously tested as negative for the virus). Mycelium plugs (0.5 cm in diameter) were taken from the centre of 7-day-old colonies of C. parasitica (donor) and C. radicalis (recipient) isolates. Then, the plugs of each isolate pair (recipient and donor) were placed 5 mm apart on a PDA in a 9 cm Petri dish, with three replicate pairings per plate forming a triangle. The plates were incubated for 7 days in the dark at 25 °C. After pairing, a toothpick method colony reverse-transcription PCR, without the needs of RNA isolation or electrophoresis, previously published by our team [8], was used. Viral concentration in the recipient was calculated.
One isolate (ABB154) tested positive for the CHV1 virus, confirmed by the absence of C. parasitica mycelium growing underneath by the real-time method described by Chandelier et al. (2019) [16], and the virus was further transmitted from ABB154 to six other C. radicalis isolates using the same methodology.
Then, from all the infected C. radicalis cultures arising from the previous transmission assays, an identical trial was implemented but, on this occasion, there was an attempt to transmit the mycovirus back to the seventy-four collection of virulent, virus-free C. parasitica isolates (EU1-74) European testers. Samples were processed as above.

4.3. Pigmentation, Spatial Differences in Viral Concentration Within Colony, Growth Rate, Sporulation Rate, and Vertical Transmission by Conidia

To determine if pigmentation changes may have occurred after virus infection and to discern whether the virus was more concentrated in the middle of the colonies, a 0.5 cm plug was taken with a flamed sterilised metallic borer from the centre and edge of the seven infected-C. radicalis isolates and isogenic non-infected controls to PDA plates (three replicates) and incubated at 25 °C for 7 days.
After this time, culture plate photographs were taken, colour (0—pink usual C. radicalis appearance; 1—intermediate; 2—white) were assigned to each culture, and the concentration of the CHV1 virus tested using the method described by Romon-Ochoa et al. [8].
For determining the growth rate, after those 7 days of incubation, colonies of C. radicalis were not completely circular, the colony areas were traced onto tracing paper and measured (in mm2) using the American Phytopathological Society Assess 2.0 program following manufacturer’s instructions.
To test the vertical transmission of the virus, single spore isolates were prepared by diluting 1:10 the product of vortexing a 0.5 cm mycelial plug (from the centre of each colony) into 100 µL of sterile distilled water. Sixty microliters were spread on new PDA with a sterile disposable spreader and incubated for 4 days under same conditions as above. After subculturing the five smallest and most discrete starting colonies onto new PDA, the single conidia colonies were tested for the virus after 7 days of incubation using the same molecular method [8].
Sporulation rate was obtained first by drawing an asterisk through the entire diameter of the plate with a scalpel in each colonised PDA plate, then adding 4 mL of Tween80 0.01%, and shaking at 180 rpm, at 20 °C, for 20 min in an orbital shaker (IncuShake MAXI, SciQuip, Newtown, Shropshire, UK). The concentration of conidia (conidia/mL) was calculated by using a Neubauer chamber hemocytometer together with a manual counter device.

4.4. In Vitro Differential Competition

For an assessment of competition in vitro, the two C. radicalis isolates with the highest (LES362) and lowest (BOS158) concentrations of the virus were selected, along with an isogenic uninfected control isolate per code. Competition between these isolates and the virus-free C. parasitica isolate WAR706 (VCG EU9) was assessed using de Wit replacement series [31,32]. In each pairwise combination, disks (0.5 cm in diameter) of colonised agar were aseptically removed from one-week-old actively growing colonies of each fungal isolates and randomly inoculated on plates of PDA at ratios of 0:1, 0.25:0.75, 0.5:0.5, 0.75:0.25, and 1:0 within a central grid of 4 cm × 5 cm (20 squares of 1 cm2 each) in a 9 cm diameter Petri dish. Each inoculum proportion treatment was replicated two times, and all plates were incubated at 25 °C in the dark. After 1 week, the areas occupied by each fungus were traced on transparent tracing paper and measured using APS Assess 2.0 program as indicated in Section 4.3. ANOVA was performed to test for deviations from linearity in the relationships between area colonised by each species and its inoculum proportion. Relative crowding coefficients (RCC) were calculated for each pairwise comparison. The RCC of species A to B was defined as ((area occupied by fungus A at 0.5:0.5)/(area occupied by fungus B at 0.5:0.5))/((area occupied by fungus A at 1:0)/(area occupied by fungus B at 1:0)). An RCC of 1 indicates equal competition, an RCC > 1 indicates that species A is outcompeting species B, and an RCC < 1 indicates that species B is outcompeting species A.

4.5. Primary Resource Capture

To quantify the ability of C. parasitica and virus-free and virus-infected C. radicalis (same isolates previously used) to colonise new substrate in pairwise combinations, one mycelial plug (0.5 cm in diameter) was taken from actively growing colonies of each fungus and placed face down on opposite sides of 9 cm Petri dishes of PDA (n = 2 plates for each pairwise combination). After 4 days at 25 °C in the dark and at 4 days intervals for 12 days thereafter, the area colonised by each fungus was measured as above and compared using a t-test comparison of paired-means with the mean area occupied by the same fungus grown in isolation.

4.6. Secondary Resource Capture

To quantify the ability of C. parasitica and virus-free and virus-infected C. radicalis to colonise a previously partially occupied substrate by other competing species, in a series of two opposite experiments per pairwise combination, one mycelial plug of the secondary competitor was placed one centimetre from the growing edge of a 4-days-old colony of the pioneer fungal species in each of two 9 cm Petri dishes (per combination) of PDA and incubated at 25 °C in the dark. Growing areas were recorded as above and added to the total at 4 days intervals for 12 days, and the mean colonised area by each fungus was analysed by ANOVA throughout the time of competition.

4.7. In Planta Experiments

Two types of bioassays (I, individual inoculations and II, challenge inoculations) were performed, each using two types of plant material: branch segments and saplings.
Sweet chestnut tree saplings (C. sativa) of approximately 1.5 m height and approximately 2 cm diameter at the root collar, were purchased from an English nursery free of the disease (Delamere, Plant Passport GB-S00/45) and grown in the nursery facility at Forest Research (Alice Holt) from May 2021 to May 2024. They were moved to a biosafety level 3 incubator (MLR-352-PE, PHCBI, Loughborough, Leicestershire, UK) at Forest Research’s Holt quarantine laboratory and acclimated to the incubator for a week with temperature-control (25/20 °C, day/night), circa 60% relative humidity, with a photoperiod of 16 h of light (3 bulbs on, 550 µmol/cm2).
Sweet chestnut branch segments (circa 2 cm diam.) were collected from a disease-free area (Haslemere) and cut into 25 cm lengths and stored for one week until use in a cold store (4 °C).
All plant material was provided with 10 mL tap water twice a week (on Mondays and Fridays). All inoculations were performed using mycelial plugs taken from actively growing cultures after seven days on PDA. The viral content in all isolates was re-checked at that point following the real-time procedure of Romon-Ochoa et al. [8].
For assay I (individual inoculations), the seven different virus-infected C. radicalis isolates, their isogenic virus-free controls plus C. parasitica EU9 (WAR706, virus-infected and virus-free) and PDA controls were inoculated. After inoculation, the holes (the inoculations were made by removing a bark disc (5 mm diam.) using a sterile cork borer) were sealed with LacBalsam (Compo, Eggenfelden, Germany). Two replicates were used. Thus, a total of 34 lesion areas per plant material type were measured after 45 days. At the time of harvesting, the length and width of the cankers, and their respective growth rate per day, were measured, and the canker area was calculated using the ellipse formula A = L/2 × W/2 × pi, where area equals half-length per half-width per pi number. For the branch segments, four branches were randomly held in buckets distributed across a map of 8.5 buckets (34 branches).
For assay II (challenge inoculations to estimate biocontrol potential), a total of 16 saplings and 16 branch segments were used. In the case of the branches, three branches were randomly placed in buckets distributed across a map of 5.3 buckets (16 branches). Two weeks following primary inoculations with virulent C. parasitica WAR706 (EU9), challenge inoculations were made with the seven virus-infected C. radicalis strains and PDA as a negative control. Eight inoculations, regularly distributed along the periphery of a virulent canker, were carried out. After secondary inoculation, the holes were sealed with sterile water-soaked sterile cotton, parafilm and aluminium foil. At the time of challenge, the length and width of the original cankers were measured. Canker expansion after the biocontrol treatments was measured after 45 days.
In all the assays, other phenotypic features were also recorded using a binary scoring system. These were the alive/chlorotic/dead status and the presence/absence of epicormic growth or callusing. The diameter of the stem at and above any callus (if present) was also measured with a calliper. At the end of the experiment, all lesions were sampled to verify virus content. Four bark samples (top, two from the centre, and bottom of the lesion) were taken using a biopsy needle (diameter 1.6 mm, Microlance 3, BD, Huesca, Spain), placed on MA+S, and incubated for 4 days at 20 °C. Mycelium was transferred onto PDA and incubated at 25 °C in the dark for 7 days, before being tested using the same real-time molecular method as above [8].
The whole procedure of assay II was repeated but only using targeted VCGs (see Table 4 for the respective selected combinations). Statistical analyses were conducted in SPSS (version 13.0). Analysis of Variance (ANOVA) (Type 2 F tests) was used to determine the significance of fixed effects. Estimated marginal means with pairwise contrasts (Tukey’s corrections) were used to show significant differences within fixed effects.

5. Conclusions

We characterised the biological features of the virus CHV1 artificially cross-infecting Cryphonectria radicalis. CHV1 is readily transmitted vertically via around 77% asexual spores and horizontally to other strains of C. radicalis via hyphal contact, while the reverse transmission back to C. parasitica proved to be very difficult. CHV1-infected C. radicalis isolates exhibited a higher viral load in the younger colony parts (edges), with reduced growth and reduced colour phenotype, all dependent on virus concentration. However, overall, several in vitro and in planta results showed that infected C. radicalis was unable to control cankers and is not suitable as biocontrol agent, at least until a characterisation method for the vegetative incompatibility system in C. radicalis is developed.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/ijms252212023/s1.

Author Contributions

Supervision, P.R.-O., M.B. and L.W.; funding acquisition, P.R.-O.; methodology, P.R.-O., P.S., J.K.O., C.G., A.P.-S. and A.L.; formal analyses, P.R.-O. and A.L.; writing–original draft, P.R.-O. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by DEFRA, British government’s Department for Environment, Food and Rural Affairs (project 192401-1001). The APC was also funded by DEFRA.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

The datasets generated and analysed during the current study are deposited in the FR THDAS repository and are available upon reasonable request.

Acknowledgments

The authors thank all Forestry Commission tree health officers for their surveillance work from which the different isolates used in the present study arise. The authors also thank two anonymous additional reviewers for their very constructive comments on the manuscript prior to submission. Daniel Rigling and Carolina Cornejo from the Swiss Federal Institute for Forest, Snow, and Landscape Research (WSL) in Switzerland, and Cecile Robin from Equipe Genetique et Ecologie des Maladies de la Foret in France (INRA), kindly provided the European testers (EU1-74).

Conflicts of Interest

The authors declare no conflicts of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript; or in the decision to publish the results.

References

  1. Anagnostakis, S.L. Chestnut blight: The classical problem of an introduced pathogen. Mycologia 1987, 79, 23–37. [Google Scholar] [CrossRef]
  2. Biraghi, A. Il cancro del castagno causato da Endothia parasitica. Ital. Agric. 1946, 7, 406. [Google Scholar]
  3. EPPO. Cryphonectria parasitica. Bull. EPPO 2005, 35, 295–298. [Google Scholar] [CrossRef]
  4. Hunter, G.; Wylder, B.; Jones, B.; Webber, J.F. First finding of Cryphonectria parasitica causing chestnut blight on Castanea sativa trees in Britain. New Dis. Rep. 2013, 27, 1. [Google Scholar] [CrossRef]
  5. Forestry Commission. Sweet Chestnut Blight (Cryphonectria parasitica). 2019. Available online: https://www.forestresearch.gov.uk/tools-and-resources/pest-and-disease-resources/sweet-chestnut-blight-cryphonectria-parasitica/ (accessed on 1 June 2024).
  6. Pérez-Sierra, A.; Romon-Ochoa, P.; Gorton, C.; Lewis, A.; Rees, H.; van der Linde, S.; Webber, J. High vegetative compatibility diversity of Cryphonectria parasitica infecting sweet chestnut (Castanea sativa) in Britain indicates multiple pathogen introductions. Plant Pathol. 2019, 68, 727–737. [Google Scholar] [CrossRef]
  7. Romon-Ochoa, P.; Kranjec Orlovic, J.; Gorton, C.; Lewis, A.; van der Linde, S.; Pérez-Sierra, A. New detections of chestnut blight in Britain during 2019–2020 reveal high Cryphonectria parasitica diversity and limited spread of the disease. Plant Pathol. 2021, 71, 793–804. [Google Scholar] [CrossRef]
  8. Romon-Ochoa, P.; Forster, J.; Chitty, R.; Gorton, C.; Lewis, A.; Eacock, A.; Kupper, Q.; Rigling, D.; Pérez-Sierra, A. Canker development and biocontrol potential of CHV1 infected English isolates of Cryphonectria parasitica is dependent on the virus concentration and the compatibility of the fungal inoculums. Viruses 2022, 14, 2678. [Google Scholar] [CrossRef]
  9. Romon-Ochoa, P.; Smith, O.; Lewis, A.; Kupper, Q.; Shamsi, W.; Rigling, D.; Pérez-Sierra, A.; Ward, L. Temperature effects on the Cryphonectria hypovirus 1 accumulation and recovery within its fungal host, the chestnut blight pathogen Cryphonectria parasitica. Viruses 2023, 15, 1260. [Google Scholar] [CrossRef]
  10. Romon-Ochoa, P.; Samal, P.; Gorton, C.; Lewis, A.; Chitty, R.; Eacock, A.; Krzywinska, E.; Crampton, M.; Pérez-Sierra, A.; Biddle, M.; et al. Cryphonectria parasitica detections in England, Jersey, and Guernsey during 2020–2023 reveal newly affected areas and infections by the CHV1 mycovirus. J. Fungi 2023, 9, 1036. [Google Scholar] [CrossRef]
  11. Choi, G.H.; Nuss, D.L. Hypovirulence of chestnut blight fungus conferred by an infectious viral cDNA. Science 1992, 257, 800–803. [Google Scholar] [CrossRef]
  12. Hillman, B.I.; Suzuki, N. Viruses of the chestnut blight fungus, Cryphonectria parasitica. Adv. Virus Res. 2004, 63, 423–472. [Google Scholar] [PubMed]
  13. Fahima, T.; Kazmierczak, P.; Hansen, D.R.; Pfeiffer, P.; van Alfen, N.K. Membrane-associated replication of an unencapsidated double-strand RNA of the fungus, Cryphonectria parasitica. Virology 1993, 195, 81–89. [Google Scholar] [CrossRef] [PubMed]
  14. Rigling, D.; Prospero, S. Cryphonectria parasitica, the causal agent of chestnut blight: Invasion history, population biology and disease control. Mol. Plant Path. 2018, 19, 7–20. [Google Scholar] [CrossRef] [PubMed]
  15. Hoegger, P.J.; Rigling, D.; Holdenrieder, O.; Heiniger, U. Cryphonectria radicalis: Rediscovery of a lost fungus. Mycologia 2002, 94, 105–115. [Google Scholar] [CrossRef] [PubMed]
  16. Chandelier, A.; Massot, M.; Fabreguettes, O. Early detection of Cryphonectria parasitica by real-time PCR. Eur. J. Plant Pathol. 2019, 153, 135–152. [Google Scholar] [CrossRef]
  17. Liu, Y.-C.; Dynek, J.N.; Hillman, B.I.; Milgroom, M.G. Diversity of viruses in Cryphonectria parasitica and C. nitschkei in Japan and China, and partial characterization of a new chrysovirus species. Mycol. Res. 2007, 111, 433–442. [Google Scholar] [CrossRef]
  18. Peever, T.L.; Liu, Y.-C.; Wang, K.; Hillman, B.I.; Foglia, R.; Milgroom, M.G. Incidence and diversity of double-stranded RNAs occurring in the chestnut blight fungus, Cryphonectria parasitica, in China and Japan. Phytopathology 1998, 88, 811–817. [Google Scholar] [CrossRef]
  19. Park, S.-M.; Kim, J.-M.; Chung, H.-J.; Lim, J.-Y.; Kwon, B.-R.; Lim, J.-G.; Kim, J.-A.; Kim, M.-J.; Cha, B.-J.; Lee, S.-H.; et al. Occurrence of diverse dsRNA in a Korean population of the chestnut blight fungus Cryphonectria parasitica. Phytopathology 2008, 112, 1220–1226. [Google Scholar] [CrossRef]
  20. Gobbin, D.; Hoegger, P.J.; Heiniger, U.; Rigling, D. Sequence variation and evolution of Cryphonectria hypovirus 1 (CHV-1) in Europe. Virus Res. 2003, 97, 39–46. [Google Scholar] [CrossRef]
  21. Rigling, D.; Borst, N.; Cornejo, C.; Supatashvili, A.; Prospero, S. Genetic and phenotypic characterization of Cryphonectria hypovirus 1 from Eurasian Georgia. Viruses 2018, 10, 687. [Google Scholar] [CrossRef]
  22. Bryner, S.F.; Rigling, D. Temperature-dependent genotype-by-genotype interaction between a pathogenic fungus and its hyperparasitic virus. Am. Nat. 2011, 177, 65–74. [Google Scholar] [CrossRef] [PubMed]
  23. Cornejo, C.; Sever, B.; Kupper, Q.; Prospero, S.; Rigling, D. A multiplexed genotyping assay to determine vegetative incompatibility and mating type in Cryphonectria parasitica. Eur. J. Plant Pathol. 2019, 155, 81–91. [Google Scholar] [CrossRef]
  24. Liu, Y.C.; Linder-Basso, D.; Hillman, B.I.; Kaneko, S.; Milgroom, M.G. Evidence of interspecies transmission of viruses in natural populations of filamentous fungi in the genus Cryphonectria. Mol. Ecol. 2013, 12, 1619–1628. [Google Scholar] [CrossRef] [PubMed]
  25. Kotta-Loizou, I.; Coutts, R.H.A. Studies on the virome of the entomopathogenic fungus Beauveria bassiana reveal novel dsRNA elements and mild hypervirulence. PLoS Pathog. 2017, 13, e1006183. [Google Scholar] [CrossRef]
  26. Zhai, L.; Zhang, M.; Hong, N.; Xiao, F.; Fu, M.; Xiang, J.; Wang, G. Identification and characterization of a novel hepta-segmented dsRNA virus from the phytopathogenic fungus Colletotrichum fructicola. Front. Microbiol. 2018, 9, 754. [Google Scholar] [CrossRef]
  27. Cornejo, C.; Hisano, S.; Braganza, H.; Suzuki, N.; Rigling, D. A new double-stranded RNA mycovirus in Cryphonectria naterciae is able to cross the species barrier and is deleterious to a new host. J. Fungi 2021, 7, 861. [Google Scholar] [CrossRef]
  28. Wang, J.; Ni, Y.; Liu, X.; Zhao, H.; Xiao, Y.; Xiao, X.; Li, S.; Liu, H. Divergent RNA viruses in Macrophomina phaseolina exhibit potential as virocontrol agents. Virus Evol. 2021, 7, veaa095. [Google Scholar] [CrossRef]
  29. Mahillon, M.; Decroës, A.; Caulier, S.; Tiendrebeogo, A.; Legrève, A.; Bragard, C. Genomic and biological characterization of a novel partitivirus infecting Fusarium equiseti. Virus Res. 2021, 297, 198386. [Google Scholar] [CrossRef]
  30. Chen, B.; Choi, G.H.; Nuss, D.L. Attenuation of fungal virulence by synthetic infectious hypovirus transcripts. Science 1994, 264, 1762–1764. [Google Scholar] [CrossRef]
  31. Romon, P.; Troya, M.; Fernandez de Gamarra, M.E.; Eguzkitza, A.; Iturrondobeitia, J.C.; Goldarazena, A. Fungal communities associated with pitch canker disease of Pinus radiata caused by Fusarium circinatum in northern Spain: Association with insects and pathogen-saprophytes antagonistic interactions. Can. J. Plant Pathol. 2008, 30, 241–253. [Google Scholar] [CrossRef]
  32. Klepzig, K.D.; Wilkens, R.T. Competitive interactions among symbiotic fungi of the southern pine beetle. Appl. Environ. Microbiol. 1997, 63, 621–627. [Google Scholar] [CrossRef] [PubMed]
Figure 1. Pictures of 7 days old cultures of the seven CHV1 mycovirus infected C. radicalis isolates (subbed from the centre or the edge) and the respective non-infected isogenic cultures, with indication of the copy number of the virus.
Figure 1. Pictures of 7 days old cultures of the seven CHV1 mycovirus infected C. radicalis isolates (subbed from the centre or the edge) and the respective non-infected isogenic cultures, with indication of the copy number of the virus.
Ijms 25 12023 g001
Figure 2. Differential competition of chestnut blight fungus, Cryphonectria parasitica EU9 vegetative compatibility group, interactions with Cryphonectria radicalis isolates LES362 and BOS158, non-infected or infected (highlighted in grey) by the CHV1 mycovirus. The significance of the decrease of C. parasitica growth areas as its proportion is lower and indicated by the p-value. Relative Crowding Coefficient, when over one, C. parasitica is outcompeting C. radicalis. See Section 4.4 for experimental details.
Figure 2. Differential competition of chestnut blight fungus, Cryphonectria parasitica EU9 vegetative compatibility group, interactions with Cryphonectria radicalis isolates LES362 and BOS158, non-infected or infected (highlighted in grey) by the CHV1 mycovirus. The significance of the decrease of C. parasitica growth areas as its proportion is lower and indicated by the p-value. Relative Crowding Coefficient, when over one, C. parasitica is outcompeting C. radicalis. See Section 4.4 for experimental details.
Ijms 25 12023 g002
Figure 3. Primary resource capture capabilities of chestnut blight fungus, Cryphonectria parasitica EU9 vegetative compatibility group (A,C,E,G), interaction with Cryphonectria radicalis isolates LES362 and BOS158, non-infected or infected (highlighted in grey) by the CHV1 mycovirus (B,D,F,H). The significance of the decrease of each fungus growth areas in pairwise confrontation with the other fungus is indicated by the p-value of a paired-samples t-test. See Section 4.5 for experimental details. Continuous and dashed lanes respectively indicate the area colonised of each species growing in isolation or confronted with the other species.
Figure 3. Primary resource capture capabilities of chestnut blight fungus, Cryphonectria parasitica EU9 vegetative compatibility group (A,C,E,G), interaction with Cryphonectria radicalis isolates LES362 and BOS158, non-infected or infected (highlighted in grey) by the CHV1 mycovirus (B,D,F,H). The significance of the decrease of each fungus growth areas in pairwise confrontation with the other fungus is indicated by the p-value of a paired-samples t-test. See Section 4.5 for experimental details. Continuous and dashed lanes respectively indicate the area colonised of each species growing in isolation or confronted with the other species.
Ijms 25 12023 g003
Figure 4. Secondary resource capture capabilities of chestnut blight fungus, Cryphonectria parasitica EU9 vegetative compatibility group (A,F), interaction with Cryphonectria radicalis isolates LES362 and BOS158, non-infected or infected (highlighted in grey) by the CHV1 mycovirus (BE,GJ), when acting as a pioneer or a competitor. See Section 4.6 for experimental details.
Figure 4. Secondary resource capture capabilities of chestnut blight fungus, Cryphonectria parasitica EU9 vegetative compatibility group (A,F), interaction with Cryphonectria radicalis isolates LES362 and BOS158, non-infected or infected (highlighted in grey) by the CHV1 mycovirus (BE,GJ), when acting as a pioneer or a competitor. See Section 4.6 for experimental details.
Ijms 25 12023 g004
Figure 5. Lesion area (mean ± SE) produced by virus-infected and virus-free C. parasitica and C. radicalis or PDA control. Lettering indicates significant differences by treatment. (A) Branch segments; (B) saplings. See Section 4 last epigraph for experimental details.
Figure 5. Lesion area (mean ± SE) produced by virus-infected and virus-free C. parasitica and C. radicalis or PDA control. Lettering indicates significant differences by treatment. (A) Branch segments; (B) saplings. See Section 4 last epigraph for experimental details.
Ijms 25 12023 g005
Figure 6. Lesion area (mean ± SE) produced by virus-infected (white bars) and virus-free (black bars) C. parasitica and C. radicalis or PDA control (white bar). Lettering indicates significant differences by treatment. (A) Branch segments; (B) saplings. See Section 4 last epigraph for experimental details.
Figure 6. Lesion area (mean ± SE) produced by virus-infected (white bars) and virus-free (black bars) C. parasitica and C. radicalis or PDA control (white bar). Lettering indicates significant differences by treatment. (A) Branch segments; (B) saplings. See Section 4 last epigraph for experimental details.
Ijms 25 12023 g006
Figure 7. Lesion area (mean ± SE) by primary inoculation and challenge inoculation (assay II) with virus or without virus (control) using branches (A,B) or saplings (C,D). Different lettering indicates significant differences between the different challenge inoculations results. See Section 4 last epigraph for experimental details.
Figure 7. Lesion area (mean ± SE) by primary inoculation and challenge inoculation (assay II) with virus or without virus (control) using branches (A,B) or saplings (C,D). Different lettering indicates significant differences between the different challenge inoculations results. See Section 4 last epigraph for experimental details.
Ijms 25 12023 g007
Figure 8. Lesion area (mean ± SE) by primary inoculation and challenge inoculation (assay II repeated, targeted) with virus or without virus (control) using branches (A,B) or saplings (C,D). Different lettering indicates significant differences between the different challenge inoculations results. See Section 4 last epigraph for experimental details.
Figure 8. Lesion area (mean ± SE) by primary inoculation and challenge inoculation (assay II repeated, targeted) with virus or without virus (control) using branches (A,B) or saplings (C,D). Different lettering indicates significant differences between the different challenge inoculations results. See Section 4 last epigraph for experimental details.
Ijms 25 12023 g008
Table 1. Isolates of the genus Cryphonectria used in this study.
Table 1. Isolates of the genus Cryphonectria used in this study.
#HostCollection IDYearCHV1
Detection (ng/µL)
Culture PreservedReferenceCounty GenBank Accession Number
C. parasitica
1Castanea sativaFTC6872020415.95Yes[8], this studyLondon
2C. sativaWAR7062021428.41Yes [8], this studyDevon
3C. sativaHYD5742019588.52Yes[8], this studyLondon
C. radicalis
1C. sativaCHI712017 No -London
2C. sativaHAY1132017 No -Devon
3C. sativaLES129a2017 No -London
4C. sativaBLA1342017 No -London
5C. sativaFRA1352017 YesThis studyLondonPQ373832
6C. sativaBOS1432017 No -London
7C. sativaBOS1442017 No -London
8C. sativaABB1542017 YesThis studyLondonPQ373833
9C. sativaBHE1562017 YesThis studyLondonPQ373834
10C. sativaBOS1572017 YesThis studyLondonPQ373835
11C. sativaBOS1582017 YesThis studyLondonPQ373836
12C. sativaBOS1592017 Yes-London
13C. sativaLES3582018 YesThis studyLondonPQ373837
14C. sativaLES3622018 YesThis studyLondonPQ373838
15C. sativaLES4122018 No -London
16C. sativaLES4152018 No-London
17C. sativaTAD4292019 No-Surrey
18C. sativaLES4502019 No-London
19C. sativaDEN4982019 No -London
20C. sativaJAC5652019 No -London
21C. sativaJAC56620198.8Yes[7]LondonMT256128
22C. sativaKEN590202019.6Yes [7]LondonMT256129
23C. sativaWCP6092020 No-London
24C. sativaACO7012021 No-Somerset
25C. sativaACO7032021 No-Somerset
26C. sativaKEN7192021 No-London
27C. sativaPOWP7332021 No-Devon
28C. sativaPOWP7342021 No-Devon
29C. sativaWATL7392021 No-London
Table 2. Cycle threshold (Ct) values and concentration (viral copies/µL) among crosses of three highly CHV1 virus infected Cryphonectria parasitica isolates against a collection of nine un-infected Cryphonectria radicalis cultures.
Table 2. Cycle threshold (Ct) values and concentration (viral copies/µL) among crosses of three highly CHV1 virus infected Cryphonectria parasitica isolates against a collection of nine un-infected Cryphonectria radicalis cultures.
Infected C. parasitica Isolate
C. radicalisFTC687
EU10
WAR706
EU9
HYD574
EU2
ABB154-
0
24.33
333,833.11 copies/µL *
-
0
LES358-
0
-
0
-
0
LES362-
0
-
0
-
0
FRA135-
0
-
0
-
0
BOS157-
0
-
0
-
0
BOS158-
0
-
0
-
0
BHE156-
0
-
0
-
0
HAY113-
0
-
0
-
0
BOS159-
0
-
0
-
0
* See article [8] for copy number calculation regression equation.
Table 3. Cycle threshold (Ct) values and concentration (viral copies/µL) among crosses of the CHV1 virus infected Cryphonectria radicalis isolate ABB154 against the other six un-infected Cryphonectria radicalis cultures.
Table 3. Cycle threshold (Ct) values and concentration (viral copies/µL) among crosses of the CHV1 virus infected Cryphonectria radicalis isolate ABB154 against the other six un-infected Cryphonectria radicalis cultures.
Infected C. radicalis
C. radicalisABB154
LES35825.30
173,075.38 *
LES36223.94
434,745.69
FRA13525.04
206,398.18
BOS15723.54
570,009.84
BOS15823.05
794,328.23
BHE15624.41
316,227.76
* See article [8] for copy number calculation regression equation.
Table 4. Cycle threshold (Ct) values and concentration (viral copies/µL) among crosses of seven CHV1 virus infected-Cryphonectria radicalis isolates against the collection of EU1-74 vegetative compatibility groups of Cryphonectria parasitica.
Table 4. Cycle threshold (Ct) values and concentration (viral copies/µL) among crosses of seven CHV1 virus infected-Cryphonectria radicalis isolates against the collection of EU1-74 vegetative compatibility groups of Cryphonectria parasitica.
Infected C. radicalis Isolate
C. parasitica VCGABB154LES358LES362FRA135BOS157BOS158BHE156
EU1
EU2
EU3
EU4
EU5
EU6
EU7
EU8
EU9 35
242.82 copies/µL *
EU10
EU11
EU12
EU13
EU14
EU15
EU1624.24
354,813.38 copies/µL
33.47
684.37 copies/µL
23.88
452,774.91 copies/µL
22.98
832,891.12 copies/µL
32.73
1129.64 copies/µL
24.7
259,839.92 copies/µL
34.6
318.37 copies/µL
EU17
EU18
EU19
EU20 30.11
6660.84 copies/µL
EU21
EU22
EU23
EU24
EU25
EU26
EU27
EU28
EU29
EU30
EU31
EU32
EU33 30.49
5149.49 copies/µL
EU34
EU35
EU36
EU37
EU38
EU39
EU40
EU41
EU42
EU43
EU4429.24
12,006.37 copies/µL
EU45
EU46
EU47
EU48
EU49 29.00
14,125.37 copies/µL
EU50
EU51
EU52
EU53
EU54
EU55
EU56
EU57
EU58
EU59
EU60
EU61
EU62 26.97
55,854.58 copies/µL
27.09
51,494.95 copies/µL
EU63
EU64
EU65
EU66
EU67
EU68
EU69
EU70
EU71
EU72
EU73
EU74
* See article [8] for copy number calculation regression equation.
Table 5. Colony growth rate (mm2) and colouration among the seven CHV1 virus-infected C. radicalis isolates (subbed from centre or edge), and isogenic control lanes.
Table 5. Colony growth rate (mm2) and colouration among the seven CHV1 virus-infected C. radicalis isolates (subbed from centre or edge), and isogenic control lanes.
C. radicalis IsolateTypeType
Binary
Colour (0 Pink, 1 Intermediate, 2 White)Growth Area (mm2)Sporulation Rate (Conidia/µL)Cycle Threshold (Ct) ValueCHV1 Virus Concentration (Copies/µL)
ABB154Non-infected control006361.72710,000- *0
Infected centre124295.634,600,00024.49299,550.87
Infected edge222081.45660,00023.79481,230.27
LES358 Non-infected control004896.841,600,000-0
Infected centre124464.902,650,00023.21712,756.48
Infected edge213820.381,450,00023.16737,304.79
LES362 Non-infected control006361.721,150,000-0
Infected centre122818.38900,00022.72993,250.57
Infected edge222891.293,500,00022.72993,250.57
FRA135 Non-infected control005202.921,820,000-0
Infected centre113320.241,650,00025.36166,183.62
Infected edge212104.342,550,00016.7158,170,913.29
BOS157 Non-infected control006361.721,220,000-0
Infected centre114247.15500,00023.71508,021.80
Infected edge222514.202,950,00022.77960,180.63
BOS158 Non-infected control006361.721,220,000-0
Infected centre113313.504,600,00023.26689,025.49
Infected edge212320.322,300,00023.68518,448.81
BHE156Non-infected control006361.722,300,000-0
Infected centre113295.203,050,00023.99420,270.98
Infected edge212174.221,850,00023.79481,230.27
Pearson coefficient ** −0.830−0.8550.8430.374N/A−0.049
p 0.00010.00010.00010.095N/A0.833
* See article [8] for copy number calculation regression equation. ** Correlation analysis against cycle threshold values. Significant correlations highlighted in grey.
Table 6. Cycle threshold (Ct) values and concentration (viral copies/µL) among the five smallest replicate single spore cultures of the seven CHV1 virus-infected C. radicalis isolates.
Table 6. Cycle threshold (Ct) values and concentration (viral copies/µL) among the five smallest replicate single spore cultures of the seven CHV1 virus-infected C. radicalis isolates.
Infected C. radicalis Isolate
Single Spore CultureABB154LES358LES362FRA135BOS157BOS158BHE156Mean
122.77
960,180.63 *
13.86
400,812,425.40
23.07
783,641.89
13.26
601,743,994.60
-
0
24.43
311,973.45
-
0
223.90
446,683.59
23.67
521,971.82
25.43
158,489.31
-
0
23.27
684,374.97
24.35
399,341.95
-
0
3-
-
25.75
127,609.30
17.09
44,971,893.81
27.92
29,352.63
28.28
23,001.95
27.71
33,838.55
26.35
84,998.59
427.29
44,971.89
24.54
289,577.42
12.80
821,685,990.30
26.95
56,616.25
30.60
4779.82
-
0
-
0
524.00
416,023.29
22.91
873,326.16
7.36
32,711,908,470.00
6.00
82,168,599,030.00
-
0
25.38
163,947.90
33.16
844.24
% vertical transmission801001008060804077.14
Mean positives24.49
299,550.87
22.14
1471,116.47
17.15
43,181,141.39
18.53
16,959,450.03
27.37
42,600.21
25.46
155,301.79
29.75
8499.85
23.55
566,162.59
* See article [8] for copy number calculation regression equation.
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Romon-Ochoa, P.; Samal, P.; Kranjec Orlović, J.; Lewis, A.; Gorton, C.; Pérez-Sierra, A.; Biddle, M.; Ward, L. Transmission of Cryphonectria Hypovirus 1 (CHV1) to Cryphonectria radicalis and In Vitro and In Vivo Testing of Its Potential for Use as Biocontrol Against C. parasitica. Int. J. Mol. Sci. 2024, 25, 12023. https://doi.org/10.3390/ijms252212023

AMA Style

Romon-Ochoa P, Samal P, Kranjec Orlović J, Lewis A, Gorton C, Pérez-Sierra A, Biddle M, Ward L. Transmission of Cryphonectria Hypovirus 1 (CHV1) to Cryphonectria radicalis and In Vitro and In Vivo Testing of Its Potential for Use as Biocontrol Against C. parasitica. International Journal of Molecular Sciences. 2024; 25(22):12023. https://doi.org/10.3390/ijms252212023

Chicago/Turabian Style

Romon-Ochoa, Pedro, Pankajini Samal, Jelena Kranjec Orlović, Alex Lewis, Caroline Gorton, Ana Pérez-Sierra, Mick Biddle, and Lisa Ward. 2024. "Transmission of Cryphonectria Hypovirus 1 (CHV1) to Cryphonectria radicalis and In Vitro and In Vivo Testing of Its Potential for Use as Biocontrol Against C. parasitica" International Journal of Molecular Sciences 25, no. 22: 12023. https://doi.org/10.3390/ijms252212023

APA Style

Romon-Ochoa, P., Samal, P., Kranjec Orlović, J., Lewis, A., Gorton, C., Pérez-Sierra, A., Biddle, M., & Ward, L. (2024). Transmission of Cryphonectria Hypovirus 1 (CHV1) to Cryphonectria radicalis and In Vitro and In Vivo Testing of Its Potential for Use as Biocontrol Against C. parasitica. International Journal of Molecular Sciences, 25(22), 12023. https://doi.org/10.3390/ijms252212023

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