Gastric Microbiota in Helicobacter pylori-Negative and -Positive Gastritis Among High Incidence of Gastric Cancer Area
Abstract
:1. Introduction
2. Results
2.1. Study Population
2.2. Detection of Operational Taxonomic Units (OTUs)
2.3. Microbiome Diversity
2.4. Univariate, Receiver Operating Characteristics (ROC) Curve and Multivariate Analysis
3. Discussion
4. Materials and Methods
4.1. Study Population and Sampling
4.2. Histological Examination and Gastritis Definition
4.3. Determination of H. pylori Infection
4.4. DNA Extraction and Sequencing
4.5. Sequence Curation and Analysis
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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OTU | Area | Lower Bound | Upper Bound | Cut off Value | Sensi-Tivity | Speci-Ficity | p Value |
---|---|---|---|---|---|---|---|
Streptococcus 1078207 | 0.74 | 0.58 | 0.9 | 3099 | 0.64 | 0.28 | 0.011 |
Streptococcus 989579 | 0.68 | 0.53 | 0.82 | - | NS | ||
Streptococcus 967427 | 0.77 | 0.6 | 0.93 | 138 | 0.73 | 0.27 | 0.005 |
Streptococcus 526131 | 0.74 | 0.59 | 0.88 | 90.5 | 0.73 | 0.27 | 0.013 |
Streptococcus 1010458 | 0.73 | 0.57 | 0.89 | 4.5 | 0.64 | 0.34 | 0.015 |
Streptococcus 525966 | 0.83 | 0.72 | 0.94 | 64.5 | 0.82 | 0.19 | 0.001 |
Fusobacterium 938948 | 0.73 | 0.55 | 0.91 | 177.5 | 0.73 | 0.31 | 0.014 |
Veillonella 511378 | 0.78 | 0.63 | 0.92 | 46 | 0.73 | 0.27 | 0.003 |
Prevotella pallens 705241 | 0.68 | 0.49 | 0.88 | - | NS | ||
Haemophilus parainfluenzae 4320756 | 0.71 | 0.54 | 0.89 | 6.5 | 0.73 | 0.27 | 0.025 |
Helicobacter pylori 10952 | 0.75 | 0.65 | 0.86 | 164.5 | 0.36 | 0.7 | 0.008 |
OTU | p Value | Odds Ratio | Lower 95% C.I. | Upper 95% C.I. |
---|---|---|---|---|
Streptococcus 525966 | 0.009 | 18.9 | 2.1 | 172.8 |
Haemophilus parainfluenzae 4320756 | 0.025 | 12.3 | 1.4 | 109.6 |
Fusobacterium 938948 | NS | 7.5 | 0.6 | 86.7 |
Veillonella 511378 | NS | 5.9 | 0.7 | 51.4 |
Helicobacter pylori 10952 | 0.028 | 0.1 | 0.0 | 0.8 |
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Gantuya, B.; El-Serag, H.B.; Matsumoto, T.; Ajami, N.J.; Oyuntsetseg, K.; Azzaya, D.; Uchida, T.; Yamaoka, Y. Gastric Microbiota in Helicobacter pylori-Negative and -Positive Gastritis Among High Incidence of Gastric Cancer Area. Cancers 2019, 11, 504. https://doi.org/10.3390/cancers11040504
Gantuya B, El-Serag HB, Matsumoto T, Ajami NJ, Oyuntsetseg K, Azzaya D, Uchida T, Yamaoka Y. Gastric Microbiota in Helicobacter pylori-Negative and -Positive Gastritis Among High Incidence of Gastric Cancer Area. Cancers. 2019; 11(4):504. https://doi.org/10.3390/cancers11040504
Chicago/Turabian StyleGantuya, Boldbaatar, Hashem B. El-Serag, Takashi Matsumoto, Nadim J. Ajami, Khasag Oyuntsetseg, Dashdorj Azzaya, Tomohisa Uchida, and Yoshio Yamaoka. 2019. "Gastric Microbiota in Helicobacter pylori-Negative and -Positive Gastritis Among High Incidence of Gastric Cancer Area" Cancers 11, no. 4: 504. https://doi.org/10.3390/cancers11040504
APA StyleGantuya, B., El-Serag, H. B., Matsumoto, T., Ajami, N. J., Oyuntsetseg, K., Azzaya, D., Uchida, T., & Yamaoka, Y. (2019). Gastric Microbiota in Helicobacter pylori-Negative and -Positive Gastritis Among High Incidence of Gastric Cancer Area. Cancers, 11(4), 504. https://doi.org/10.3390/cancers11040504