Presence of the Human Cytomegalovirus in Glioblastomas—A Systematic Review
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Analyses of Sample Preparation and Identification of Methods Used for HCMV Analyses
2.2. Identifying Optimal Methods for More Accurate HCMV Testing
3. Results
3.1. HCMV Protein Detection in Tumor Specimens
3.2. HCMV IE Protein Detection
3.3. HCMV Late Protein Detection
3.4. Optimized Techniques More Often Reveal Viral Proteins in Glioblastomas
3.5. Detection of HCMV Nucleic Acids in Tumor Samples
3.5.1. Detection of HCMV Nucleic Acids by PCR Methods
3.5.2. Detection of the HCMV Genome by Next-Generation Sequencing
3.5.3. Detection of the HCMV Genome by ISH
3.6. Analyses of Blood Samples to Detect HCMV DNA, HCMV-Specific Antibodies, or HCMV-Reactive T-Cells to HCMV
3.6.1. PCR Analyses
3.6.2. HCMV Serology Analyses
3.6.3. Detection of HCMV-Reactive T cells
3.7. Detection of HCMV Proteins Using Western Blot Analyses
4. Additional Finding
5. Discussion
6. Conclusions
Supplementary Materials
Author Contributions
Funding
Conflicts of Interest
References
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Number of Patients | |||
---|---|---|---|
(n = 3770) | (n = 1561) | ||
Evidence of HCMV (%) | HCMV in Tissue Specimens (%) | HCMV in Blood Samples (%) | |
Articles (n = 81) | 51/81 (63.0) | - | |
Analyses (n * = 247) | 192/247 (77.7) | 141/190 (74.2) | 51/57 (89.5) |
Samples (n º = 9444) | 3623/9444 (38.4) | 2529/7024 (36.0) | 1094/2420 (45.2) |
Methods | Tumor Tissue Specimens | Blood Samples | ||||||
---|---|---|---|---|---|---|---|---|
IF | IHC | ISH | PCR | NGS | FACS | PCR | ELISA | |
(%) | (%) | (%) | (%) | (%) | (%) | (%) | (%) | |
Articles | 4/4 | 25/39 | 10/15 | 29/48 | 0/7 | 6/6 | 8/15 | 14/20 |
(100) | (64.1) | (66.7) | (60.4) | 0 | (100) | (53.3) | (70.0) | |
Analyses | 6/6 | 51/74 | 11/18 | 73/85 | 0/7 | 8/8 | 14/20 | 28/29 |
(100) | (68.9) | (61.1) | (85.9) | 0 | (100) | −70 | (96.6) | |
Positive | 119/217 | 1500/3111 | 132/339 | 778/2676 | 0/681 | 216/288 | 238/883 | 640/1249 |
Samples | (54.8) | (48.2) | (38.9) | (29.1) | 0 | (75.0) | (27.0) | (51.2) |
Analyzed | 217/7024 | 3111/7024 | 339/7024 | 2676/7024 | 681/7024 | 288/2420 | 883/2420 | 1249/2420 |
Samples/ | (3.1) | (44.3) | (4.8) | (38.1) | (9.7) | (11.9) | (36.5) | (51.6) |
Total number of samples |
Methods | IE1 * | IE2 ** | IEA | EA | LA£ | pp65 | CCH2 + DDG9 | Other |
---|---|---|---|---|---|---|---|---|
(%) | (%) | (%) | (%) | (%) | (%) | (%) | (%) | |
Expression of the HCMV | 389/773 | 73/73 | 230/327 | 122/159 | 275/533 | 329 ∞/630 ∞ | 40/537 | 42/79 |
50.3 | 100 | 70.3 | 76.7 | 51.6 | 52.2 | 7.4 | 53.2 | |
Analyzed Samples/Total samples (n = 3111) | 773/3111 | 73/3111 | 327/3111 | 159/3111 | 533/3111 | 630/3111 | 537/3111 | 79/3111 |
(24.9) | (2.4) | (10.5) | (5.1) | (17.1) | (20.3) | (17.3) | (2.5) |
Antibodies Targeting the HCMV | Total Number of Analysis (n = 37) | HCMV-Positive Samples (%) (n = 1391/1653 (84,2) | References |
---|---|---|---|
IE72 (n = 368) | 10 | 256/368 (69.6) | [2,27,29,36,50,56,63,87] |
IE1 clone 8B1.2 (n = 68) (optimized methods) | 1 | 61/68 (89.7) | [4] |
IE1 clone 6F8.2 (n = 68) | 1 | 61/68 (89.7) | [4] |
IE2 (n = 73) | 3 | 73/73 (100) | [40,41,43] |
IEA (n = 236) | 6 | 230/236 (97.5) | [2,19,52,54,59,95] |
EA clone QB1/42 EA clone BM204 (n = 136) | 2 | 122/136 (89.7) | [4] |
LA (n = 1 97) | 3 | 188/197 (95.4) | [19,52,54] |
LA clone1G5.2 (n = 104) | 2 | 87/104 (83.7) | [4,57] |
pp65 (n = 93) | 4 | 79/93 (84.9) | [2,27,50,57] |
pp65 clone 12D10 (n = 36) | 1 | 28/36 (77.8) | [57] |
pp65 clones 2 and 6 (n = 274) | 6 | 206/274 (75.2) | [4,29,38,46,47,66] |
HCMV Genes | No Def | Nested | RT, Taq, q | RT | ddPCR | Samples | % | %/tot 2676 | Analysis |
---|---|---|---|---|---|---|---|---|---|
Pos/tot | Pos/tot | Pos/tot | Pos/tot | Pos/tot | Pos/tot | ||||
No def | 13/22 | 31/146 | 106/441 | 0/45 | 150/654 | 22.9 | 24.4 | 19 | |
gB | 5/13 | 84/258 | 94/366 | 183/637 | 28.7 | 23.8 | 19 | ||
pp71 | 5/5 | 22/25 | 27/30 | 90 | 1.1 | 4 | |||
IE1 | 26/73 | 21/162 | 25/25 | 72/260 | 27.7 | 9.7 | 12 | ||
pp65 | 6/18 | 10/11 | 169/612 | 185/641 | 28.9 | 24.0 | 9 | ||
US28 | 8/8 | 8/8 | 18/44 | 34/60 | 56.7 | 2.2 | 3 | ||
UL144 | 4/5 | 0/116 | 4/5 | 8/126 | 6.3 | 4.7 | 3 | ||
Others | 49/50 | 65/198 | 5/20 | 119/268 | 44.4 | 10.0 | 16 | ||
Samples | 90/121 | 151/604 | 489/1817 | 48/89 | 0/45 | 778/2676 | 29.1 | ||
% | 74.4 | 25 | 26.9 | 53.9 | 0 | 29.1 | |||
%/tot 2676 | 4.5 | 22.6 | 67.9 | 3.3 | 1.7 | 100 | |||
Analysis | 14 | 20 | 47 | 3 | 1 | 85 |
Methods | NGS DNA | NGS RNA | Meta RNA | ISH RNA | ISH DNA |
---|---|---|---|---|---|
Samples | 0/55 | 0/606 | 0/20 | 10/117 | 122/222 |
Analysis | 2 | 4 | 1 | 5 | 13 |
HCMV Genes | No def | Nested | RT, Taq, q | RT | Samples | % | %/tot 883 | Analysis |
---|---|---|---|---|---|---|---|---|
Pos/tot | Pos/tot | Pos/tot | Pos/tot | Pos/tot | 4 | |||
No def | 6/41 | 0/19 | 6/60 | 10 | 6.8 | 7 | ||
gB | 27/40 | 15/56 | 0/27 | 42/123 | 34,1 | 13.9 | 5 | |
IE1 | 135/251 | 0/23 | 18/149 | 153/423 | 36,2 | 47.9 | 3 | |
pp65 | 33/239 | 33/239 | 13,8 | 27.1 | 1 | |||
US17 | 4/38 | 4/38 | 10,5 | 4.3 | ||||
Samples | 168/332 | 15/79 | 55/453 | 0/19 | 238/883 | 27 | ||
% | 50.6 | 19 | 12.1 | 0 | 27.0 | |||
%/tot 883 | 37.6 | 9 | 51.3 | 2.2 | 100 | |||
Analysis | 6 | 4 | 8 | 2 | 20 |
Methods | HCMV-IgG | HCMV-IgM | HCMV-Ig | HCMV-IE Peptides (T Cell Stimulation) | HCMV-pp65 Peptides (T Cell Stimulation) |
---|---|---|---|---|---|
Analyses | 12/12 | 5/7 | 2/2 | 2/2 | 3/3 |
Samples (%) | 562/883 (63.6) | 33/297 (11.1) | 45/69 (65.2) | 21/23 (91.3) | 195/265 (73.6) |
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Peredo-Harvey, I.; Rahbar, A.; Söderberg-Nauclér, C. Presence of the Human Cytomegalovirus in Glioblastomas—A Systematic Review. Cancers 2021, 13, 5051. https://doi.org/10.3390/cancers13205051
Peredo-Harvey I, Rahbar A, Söderberg-Nauclér C. Presence of the Human Cytomegalovirus in Glioblastomas—A Systematic Review. Cancers. 2021; 13(20):5051. https://doi.org/10.3390/cancers13205051
Chicago/Turabian StylePeredo-Harvey, Inti, Afsar Rahbar, and Cecilia Söderberg-Nauclér. 2021. "Presence of the Human Cytomegalovirus in Glioblastomas—A Systematic Review" Cancers 13, no. 20: 5051. https://doi.org/10.3390/cancers13205051
APA StylePeredo-Harvey, I., Rahbar, A., & Söderberg-Nauclér, C. (2021). Presence of the Human Cytomegalovirus in Glioblastomas—A Systematic Review. Cancers, 13(20), 5051. https://doi.org/10.3390/cancers13205051