Atomic Arrangement, Hydrogen Bonding and Structural Complexity of Alunogen, Al2(SO4)3·17H2O, from Kamchatka Geothermal Field, Russia
Abstract
:1. Introduction
Alunogen | Alunogen | Synthetic Analogue | Selenate Analogue | Low-Temperature Modification | Dehydrated Modification | |
---|---|---|---|---|---|---|
Chemical formula, [Al(H2O)6]2(TO4)3·nH2O | ||||||
n, T | n = 4.4, T = S | n = 5, T = S | n = 4, T = S | n = 4, T = Se | n = 4.8, T = S | n = 1.8, T = S |
Symmetry | Triclinic | Triclinic | Triclinic | Monoclinic | Monoclinic | Triclinic |
Space group | P-1 | P-1 | P-1 | P21 | P21 | P-1 |
a, Å | 7.425 | 7.420 | 6.054 | 6.152 | 7.412 | 14.35 |
b, Å | 26.975 | 26.970 | 7.424 | 27.445 | 26.834 | 12.49 |
c, Å | 6.061 | 6.062 | 26.915 | 7.5650 | 6.078 | 6.09 |
α, ° | 90.03 | 89.57 | 88.047 | 90 | 90 | 92.66 |
β, ° | 97.66 | 97.34 | 89.948 | 97.93 | 97.31 | 96.65 |
γ, ° | 91.94 | 91.53 | 82.502 | 90 | 90 | 100.83 |
V, Å3 | 1202.38 | 1202.73 | 1198.64 | 1265.09 | 1199.01 | 1062.8 |
Z | 2 | 2 | 2 | 2 | 2 | 2 |
Genesis, locality | Natural from Vulcano, Italy | Natural from Königsber, Hungary | Synthetic | Synthetic | Colling of synthetic sample | Heating of synthetic sample |
Reference | [6] | [10] | [11] | [12] | [17] | [18] |
2. Materials and Methods
2.1. Materials
2.2. Methods
2.2.1. Scanning Electron Microscopy and Energy-Dispersive X-ray Spectroscopy
2.2.2. Single-Crystal X-ray Diffraction
2.2.3. Structural Complexity
3. Results
3.1. Chemical Composition
3.2. Crystal Structure
3.3. Structural Complexity
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Crystal System | Triclinic |
---|---|
Space group | P-1 |
a (Å) | 7.4194(3) |
b (Å) | 26.9763(9) |
c (Å) | 6.0549(2) |
α (°) | 90.043(3) |
β (°) | 97.703(3) |
γ (°) | 91.673(3) |
V (Å3) | 1200.41(7) |
Z | 2 |
Calculated density (g/cm3) | 1.732 |
Absorption coefficient | 0.496 |
Diffractometer | Rigaku XtaLAB Synergy-S |
Temperature (K) | 293 |
Radiation, wavelength (Å) | MoKα, 0.71073 |
Range of data collection, 2θ (°) | 6.392–59.998 |
h, k, l ranges | −10→10, −37→37, −8→8 |
Total reflection collected | 21,599 |
Unique reflections (Rint) | 6985(0.0408) |
Number of unique reflections F > 2σ(F) | 5112 |
Data completeness (%) | 99.1 |
Refinement method | Full-matrix least-squares on F2 |
Weighting coefficients a, b | 0.0842, 4.2534 |
Data/ restrain/ parameters | 6985/23/356 |
R1 [F > 2σ(F)], wR2 [F > 2σ(F)] | 0.0680, 0.1830 |
R1 all, wR2 all | 0.0947, 0.1981 |
Goodness-of-fit on F2 | 1.049 |
Largest diff. peak and hole (ēÅ−3) | 1.41/−0.62 |
Constituent | Wt.% | apfu 1 |
---|---|---|
Al2O3 | 16.64 | 2.04 |
SO3 | 37.88 | 2.96 |
H2O | 45.48 | 15.8 |
Total | 100.00 | - |
Atom | x | y | z | Ueq | s.o.f. * |
---|---|---|---|---|---|
Al1 | 0.78185(17) | 0.09886(4) | 0.50210(19) | 0.0167(2) | 1 |
Al2 | 0.7633.8(17) | 0.40035(4) | 0.49664(19) | 0.0152(2) | 1 |
S1 | 0.26873(14) | 0.06032(4) | 0.01951(16) | 0.0195(2) | 1 |
S2 | 0.8767(2) | 0.25246(5) | 0.0304(2) | 0.0373(3) | 1 |
S3 | 0.25792(14) | 0.43956(4) | 0.01326(16) | 0.018(2) | 1 |
O1 | 0.7331(4) | 0.07010(11) | 0.2166(5) | 0.0208(6) | 1 |
H1A | 0.629562 | 0.077332 | 0.129221 | 0.070(20) | 1 |
H1B | 0.726442 | 0.037102 | 0.203752 | 0.043(17) | 1 |
O2 | 0.5469(4) | 0.07816(12) | 0.5602(5) | 0.0253(6) | 1 |
H2A | 0.514433 | 0.077916 | 0.689613 | 0.038 | 1 |
H2B | 0.484467 | 0.054801 | 0.490644 | 0.038 | 1 |
O3 | 0.8734(4) | 0.03768(10) | 0.6112(5) | 0.0212(6) | 1 |
H3A | 0.987721 | 0.035292 | 0.677682 | 0.028(14) | 1 |
H3B | 0.798441 | 0.015192 | 0.663402 | 0.060(20) | 1 |
O4 | 0.8327(5) | 0.12538(11) | 0.7909(5) | 0.0242(6) | 1 |
H4A | 0.922831 | 0.112312 | 0.882852 | 0.060(20) | 1 |
H4B | 0.816461 | 0.155182 | 0.849011 | 0.036(16) | 1 |
O5 | 0.6910(5) | 0.15850(12) | 0.3869(6) | 0.0292(7) | 1 |
H5A | 0.755229 | 0.169346 | 0.289779 | 0.044 | 1 |
H5B | 0.705253 | 0.180607 | 0.489091 | 0.044 | 1 |
O6 | 0.6723(5) | 0.33977(12) | 0.3726(5) | 0.0269(7) | 1 |
H6A | 0.557522 | 0.333332 | 0.315609 | 0.060(20) | 1 |
H6B | 0.745632 | 0.320012 | 0.31037 | 0.080(30) | 1 |
O7 | 0.5278(4) | 0.41786(12) | 0.5461(5) | 0.0237(6) | 1 |
H7A | 0.477642 | 0.417182 | 0.672458 | 0.060(20) | 1 |
H7B | 0.445572 | 0.434082 | 0.450818 | 0.080(30) | 1 |
O8 | 0.7227(4) | 0.43029(11) | 0.2133(5) | 0.0212(6) | 1 |
H8A | 0.617753 | 0.423902 | 0.122989 | 0.024(13) | 1 |
H8B | 0.734013 | 0.462642 | 0.192039 | 0.032(15) | 1 |
O9 | 0.8591(4) | 0.46183(11) | 0.6180(5) | 0.0223(6) | 1 |
H9A | 0.975952 | 0.464422 | 0.681249 | 0.030(15) | 1 |
H9B | 0.782732 | 0.482812 | 0.667619 | 0.024(13) | 1 |
O10 | 0.0003(4) | 0.38597(12) | 0.4492(5) | 0.0241(6) | 1 |
H10A | 0.046469 | 0.359188 | 0.50095 | 0.036 | 1 |
H10B | 0.028361 | 0.38766 | 0.317745 | 0.036 | 1 |
O11 | 0.0199(4) | 0.11697(12) | 0.4490(5) | 0.0251(6) | 1 |
H11A | 0.068681 | 0.107622 | 0.328402 | 0.050(20) | 1 |
H11B | 0.041821 | 0.147012 | 0.507622 | 0.100(30) | 1 |
O12 | 0.8036(4) | 0.37269(11) | 0.7830(5) | 0.0228(6) | 1 |
H12A | 0.900811 | 0.385322 | 0.86682 | 0.040(17) | 1 |
H12B | 0.784091 | 0.341862 | 0.82899 | 0.049(19) | 1 |
O13 | 0.1265(5) | 0.09455(14) | 0.0551(6) | 0.0330(8) | 1 |
O14 | 0.1975(5) | 0.02533(13) | 0.1607(6) | 0.0344(8) | 1 |
O15 | 0.3266(5) | 0.03353(14) | 0.2275(6) | 0.0353(8) | 1 |
O16 | 0.4281(5) | 0.08828(13) | 0.0448(5) | 0.0279(7) | 1 |
O17 | 0.0547(8) | 0.2527(2) | 0.0519(9) | 0.0734(15) | 1 |
O18 | 0.8967(7) | 0.27314(17) | 0.2560(8) | 0.0571(13) | 1 |
O19 | 0.7446(8) | 0.28140(17) | 0.1156(9) | 0.0664(15) | 1 |
O20 | 0.8074(8) | 0.20139(14) | 0.0374(7) | 0.0581(14) | 1 |
O21 | 0.4094(4) | 0.41111(12) | 0.0537(5) | 0.0254(6) | 1 |
O22 | 0.1939(5) | 0.47437(12) | 0.1653(6) | 0.0323(8) | 1 |
O23 | 0.1077(5) | 0.40518(13) | 0.0516(5) | 0.0280(7) | 1 |
O24 | 0.3261(5) | 0.46681(13) | 0.2206(5) | 0.0310(7) | 1 |
Ow25 | 0.3442(10) | 0.3054(3) | 0.2757(17) | 0.112(4) | 0.938(19) |
H25A | 0.405511 | 0.284882 | 0.359081 | 0.168 | 0.938(19) |
H25B | 0.324039 | 0.29113 | 0.149356 | 0.168 | 0.938(19) |
Ow26 | 0.2092(8) | 0.32520(18) | 0.7034(9) | 0.0600(13) | 1 |
H26A | 0.253358 | 0.334482 | 0.83401 | 0.090 | 1 |
H26B | 0.231035 | 0.29443 | 0.700003 | 0.090 | 1 |
Ow27 | 0.5093(9) | 0.2186(3) | 0.5909(12) | 0.073(3) | 0.828(16) |
H27A | 0.584529 | 0.235869 | 0.680159 | 0.109 | 0.828(16) |
H27B | 0.486283 | 0.193019 | 0.665419 | 0.109 | 0.828(16) |
Ow28 ** | 0.1137(9) | 0.2089(2) | 0.5554(11) | 0.0426(14) | 0.65 |
H28A | 0.071602 | 0.227891 | 0.450088 | 0.064 | 0.65 |
H28B | 0.228548 | 0.213117 | 0.564612 | 0.064 | 0.65 |
Ow29 ** | 0.2236(18) | 0.1790(5) | 0.7460(20) | 0.050(3) | 0.35 |
H29A | 0.3004 | 0.187195 | 0.659704 | 0.075 | 0.35 |
H29B | 0.273149 | 0.188686 | 0.874557 | 0.075 | 0.35 |
Bond | Distance (Å) | Bond | Distance (Å) |
---|---|---|---|
Al–O1 | 1.880(3) | S1–O13 | 1.460(3) |
Al1–O2 | 1.893(3) | S1–O14 | 1.475(3) |
Al1–O3 | 1.889(3) | S1–O15 | 1.472(3) |
Al1–O4 | 1.875(3) | S1–O16 | 1.480(3) |
Al1–O5 | 1.862(3) | <S–O> | 1.472 |
Al1–O11 | 1.888(3) | ||
<Al1–O> | 1.881 | S2–O17 | 1.473(5) |
S2–O18 | 1.462(4) | ||
Al2–O6 | 1.868(3) | S2–O19 | 1.471(5) |
Al2–O7 | 1.886(3) | S2–O20 | 1.459(4) |
Al2–O8 | 1.888(3) | <S2–O> | 1.467 |
Al2–O9 | 1.893(3) | ||
Al2–O10 | 1.871(3) | S3–O21 | 1.479(3) |
Al2–O12 | 1.878(3) | S3–O22 | 1.472(3) |
<Al2–O> | 1.881 | S3–O23 | 1.471(3) |
S3–O24 | 1.476(3) | ||
<S3–O> | 1.475 |
D–H | d(D–H), Å | d(H…A), Å | <DHA, ° | d(D…A), Å | A |
---|---|---|---|---|---|
O1-H1A | 0.90 | 2.65 | 116.7 | 3.155(5) | O15 |
1.74 | 177.1 | 2.640(4) | O16 | ||
O1-H1B | 0.89 | 1.82 | 158.0 | 2.670(4) | O14 |
O2-H2A | 0.85 | 1.83 | 169.7 | 2.674(4) | O16 |
O2-H2B | 0.85 | 1.92 | 147.8 | 2.679(5) | O15 |
O3-H3A | 0.89 | 2.85 | 121.7 | 3.402(4) | O13 |
1.75 | 171.2 | 2.638(4) | O14 | ||
2.93 | 100.8 | 3.221(6) | O3 | ||
O3-H3B | 0.90 | 1.77 | 173.3 | 2.659(4) | O15 |
O4-H4A | 0.89 | 1.79 | 170.5 | 2.678(5) | O13 |
2.83 | 101.8 | 3.141(4) | O1 | ||
O4-H4B | 0.90 | 1.70 | 161.1 | 2.561(5) | O20 |
O5–H5A | 0.85 | 1.84 | 157.9 | 2.646(5) | O20 |
O5-H5B | 0.85 | 1.97 | 125.4 | 2.557(7) | Ow27 |
3.08 | 105.8 | 3.409(7) | Ow28 | ||
O6-H6A | 0.89 | 1.72 | 160.1 | 2.572(8) | Ow25 |
O6-H6B | 0.89 | 1.77 | 164.9 | 2.644(5) | O18 |
2.78 | 134.2 | 3.460(7) | O19 | ||
O7-H7A | 0.89 | 1.80 | 170.8 | 2.691(4) | O21 |
O7-H7B | 0.90 | 1.80 | 166.1 | 2.683(4) | O24 |
O8-H8A | 0.90 | 1.78 | 179.5 | 2.685(4) | O21 |
2.62 | 117.3 | 3.136(5) | O24 | ||
O8-H8B | 0.89 | 1.78 | 168.0 | 2.653(4) | O22 |
O9-H9A | 0.90(1) | 1.767(11) | 172.0(14) | 2.661(4) | O22 |
2.837(14) | 121.2(11) | 3.392(4) | O23 | ||
3.033(15) | 102.7(11) | 3.348(6) | O9 | ||
O9-H9B | 0.89 | 1.78 | 167.4 | 2.657(4) | O24 |
O10-H10A | 0.85 | 2.87 | 112.8 | 3.293(6) | O18 |
1.86 | 151.2 | 2.640(6) | Ow26 | ||
O10-H10B | 0.85 | 1.85 | 167.4 | 2.681(4) | O23 |
O11-H11A | 0.90 | 1.80 | 168.3 | 2.685(4) | O13 |
O11-H11B | 0.89 | 1.75 | 163.9 | 2.613(7) | Ow28 |
2.02 | 136.7 | 2.729(12) | Ow29 | ||
O12-H12A | 0.88 | 1.84 | 174.2 | 2.721(4) | O23 |
3.11 | 101.5 | 3.397(6) | Ow26 | ||
O12-H12B | 0.89 | 1.69 | 173.3 | 2.578(5) | O19 |
Ow25-H25A | 0.85 | 2.36 | 166.7 | 3.190(13) | Ow27 |
Ow25-H25B | 0.85 | 2.40 | 132.3 | 3.042(10) | O17 |
Ow26-H26A | 0.85 | 2.39 | 128.1 | 2.991(6) | O21 |
2.65 | 122.5 | 3.191(6) | O23 | ||
Ow26-H26B | 0.85 | 2.38 | 108.1 | 2.769(7) | O17 |
2.55 | 145.8 | 3.292(8) | Ow28 | ||
Ow27-H27A | 0.85 | 1.99 | 174.7 | 2.841(8) | O19 |
2.72 | 126.2 | 3.298(9) | O20 | ||
Ow27-H27B | 0.85 | 2.10 | 120.4 | 2.631(14) | Ow29 |
Ow28-H28A | 0.85 | 2.06 | 160.6 | 2.875(8) | O18 |
Ow28-H28B | 0.85 | 2.07 | 176.4 | 2.918(9) | Ow27 |
Ow29-H29A | 0.85 | 1.84 | 154.0 | 2.631(14) | Ow27 |
Ow29-H29B | 0.85 | 2.48 | 99.3 | 2.752(15) | O17 |
Alunogen | Alunogen | Alunogen | Synthetic Analogue | Selenate Analogue | Low-Temperature Modification | |
---|---|---|---|---|---|---|
Chemical formula, [Al(H2O)6]2(TO4)3·nH2O | ||||||
n, T | n = 3.8 1, T = S | n = 4.4, T = S | n = 5, T = S | n = 4, T = S | n = 4, T = Se | n = 4.8, T = S |
H-positions in cif-file | Located | Non-located | Non-located | Located | Non-located | Located |
Symmetry | Triclinic | Triclinic | Triclinic | Triclinic | Monoclinic | Monoclinic |
Space group | P-1 | P-1 | P-1 | P-1 | P21 | P21 |
IG, bits/atom | 6.1 | 5.1 | 5.1 | 6.0 | 5.0 | 6.1 |
IG,total bits/cell | 828 | 346 | 346 | 783 | 333 | 828 |
Reference | This research | 6 | 10 | 11 | 12 | 17 |
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Zhitova, E.S.; Sheveleva, R.M.; Zolotarev, A.A.; Nuzhdaev, A.A. Atomic Arrangement, Hydrogen Bonding and Structural Complexity of Alunogen, Al2(SO4)3·17H2O, from Kamchatka Geothermal Field, Russia. Crystals 2023, 13, 963. https://doi.org/10.3390/cryst13060963
Zhitova ES, Sheveleva RM, Zolotarev AA, Nuzhdaev AA. Atomic Arrangement, Hydrogen Bonding and Structural Complexity of Alunogen, Al2(SO4)3·17H2O, from Kamchatka Geothermal Field, Russia. Crystals. 2023; 13(6):963. https://doi.org/10.3390/cryst13060963
Chicago/Turabian StyleZhitova, Elena S., Rezeda M. Sheveleva, Andrey A. Zolotarev, and Anton A. Nuzhdaev. 2023. "Atomic Arrangement, Hydrogen Bonding and Structural Complexity of Alunogen, Al2(SO4)3·17H2O, from Kamchatka Geothermal Field, Russia" Crystals 13, no. 6: 963. https://doi.org/10.3390/cryst13060963
APA StyleZhitova, E. S., Sheveleva, R. M., Zolotarev, A. A., & Nuzhdaev, A. A. (2023). Atomic Arrangement, Hydrogen Bonding and Structural Complexity of Alunogen, Al2(SO4)3·17H2O, from Kamchatka Geothermal Field, Russia. Crystals, 13(6), 963. https://doi.org/10.3390/cryst13060963