Genetic Characterization of European Plum (Prunus domestica L.) Accessions from Norway Using ECPGR-Selected SSR Markers
Abstract
:1. Introduction
2. Materials and Methods
2.1. Plant Material and Collection Management
2.2. Genetic Characterization
2.3. Biostatistical Analysis
3. Results and Discussion
3.1. SSR Polymorphism
3.2. Genetic Identity and Relationships
3.3. Genetic Structure
4. Conclusions
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
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Number | Plum Accession | Abbreviation | GC |
---|---|---|---|
1 | ‘Hestaplomme’ | HSP | admixed |
2 | ‘Admiral’ | ADM | 2 |
3 | ‘Plomme 19:6′ | P19 | 3 |
4 | ‘Sandeplomme’ | SND | 1 |
5 | ‘Stokkarudplomme‘ | STK | 3 |
6 | ‘Rødplomme’ (‘Eikerplomme’) | RDP | 1 |
7 | ‘Katarina’ | KAT | 1 |
8 | ‘Jefferson’ | JEF | 2 |
9 | ‘Gul eggeplomme’ | GEP | 1 |
10 | ‘Early Laxton’ | ELA | 3 |
11 | ‘Washington’ | WAS | 2 |
12 | ‘Sviskeplomme’ | SVP | 2 |
13 | ‘Tråneplomme’ | TRP | Admixed |
14 | ‘Søgne’ | SGN | 3 |
15 | ‘Sviske fra Tveit’ | SVT | Admixed |
16 | ‘Sukkerplomme’ | SKP | Admixed |
17 | ‘Sinikka’ | SNK | 1 |
18 | ‘Reine Claude Noir’ | RCN | Admixed |
19 | ‘Reine Claude Grøn’ | RCG | 1 |
20 | ‘Reine Claude Precoce’ | PRE | 3 |
21 | ‘Mount Royal’ | MTR | 1 |
22 | ‘Italiensk sviske’ | ITA | Admixed |
23 | ‘Experimentalfältets sviske’ | EXP | 2 |
24 | ‘Emil’ | EML | Admixed |
25 | ‘Edwards’ | EDW | 2 |
26 | ‘Diamond’ | DIA | Admixed |
27 | ‘Bonne de Bry’ | BDB | 1 |
28 | ‘Laura’ | LAU | 2 |
29 | ‘Victoria UMB’ | VIC | 2 |
30 | ‘Rød Victoria Ruud’ | RVR | Admixed |
31 | ‘Victoria EMLA’ | VEM | 2 |
32 | ‘Blue Rock’ | BLR | Admixed |
33 | ‘Edda’ | EDD | 3 |
34 | ‘Reine Claude Souffriau’ | RCS | 3 |
35 | ‘Ive’ | IVE | 3 |
36 | ‘Czar’ | CZR | Admixed |
37 | ‘Reine Claude d’Oullins’ | RDO | Admixed |
38 | ‘Reine Claude d’Althanns’ | ALT | 3 |
39 | ‘Rivers Early Prolific’ | REP | 3 |
40 | ‘Henrik’ | HNK | 3 |
Locus Code | No. of Alleles | No. of Rare Alleles | No. of Effective Alleles | Detected Alle Range | Gene Diversity (He) |
---|---|---|---|---|---|
UDP96 | 24 | 17 | 12.53 | 100/150 | 0.92 |
UDP98 | 18 | 12 | 8.85 | 156/203 | 0.89 |
BPPCT039 | 22 | 15 | 9.33 | 122/183 | 0.89 |
BPPCT034 | 25 | 20 | 10.15 | 215/271 | 0.90 |
CPSCT026 | 19 | 14 | 9.78 | 165/210 | 0.90 |
BPPCT007 | 18 | 9 | 12.76 | 121/157 | 0.92 |
BPPCT014 | 25 | 16 | 11.25 | 186/258 | 0.91 |
BPPCT040 | 17 | 9 | 10.82 | 113/174 | 0.91 |
PacA33 | 28 | 23 | 9.42 | 169/260 | 0.89 |
Average | 21.78 | 15 | 10.54 | 0.90 |
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Meland, M.; Frøynes, O.; Fotirić Akšić, M.; Pojskić, N.; Kalamujić Stroil, B.; Miralem, M.; Konjić, A.; Gasi, F. Genetic Characterization of European Plum (Prunus domestica L.) Accessions from Norway Using ECPGR-Selected SSR Markers. Agronomy 2024, 14, 732. https://doi.org/10.3390/agronomy14040732
Meland M, Frøynes O, Fotirić Akšić M, Pojskić N, Kalamujić Stroil B, Miralem M, Konjić A, Gasi F. Genetic Characterization of European Plum (Prunus domestica L.) Accessions from Norway Using ECPGR-Selected SSR Markers. Agronomy. 2024; 14(4):732. https://doi.org/10.3390/agronomy14040732
Chicago/Turabian StyleMeland, Mekjell, Oddmund Frøynes, Milica Fotirić Akšić, Naris Pojskić, Belma Kalamujić Stroil, Merima Miralem, Almira Konjić, and Fuad Gasi. 2024. "Genetic Characterization of European Plum (Prunus domestica L.) Accessions from Norway Using ECPGR-Selected SSR Markers" Agronomy 14, no. 4: 732. https://doi.org/10.3390/agronomy14040732