Development and Integration of an SSR-Based Molecular Identity Database into Sugarcane Breeding Program
Abstract
:Conflicts of Interest
References
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SSR Name | Repeat Motif | Forward Primer Sequence (5′ to 3′) Reverse Primer Sequence (5′ to 3′) | Annealing Temp (°C) |
---|---|---|---|
SMC119CG | (TTG)12 | TTCATCTCTAGCCTACCCCAA | 58 |
AGCAGCCATTTACCCAGGA | |||
SMC1604SA | (TGC)7 | AGGGAAAAGGTAGCCTTGG | 58 |
TTCCAACAGACTTGGGTGG | |||
SMC18SA | (CGA)10 | ATTCGGCTCGACCTCGGGAT | 62 |
AGTCGAAAGGTATAATAGTGTTAC | |||
SMC24DUQ | (TG)13 | CGCAACGACATATACACTTCGG | 64 |
CGACATCACGGAGCAATCAGT | |||
SMC278CS | (TG)19 (AG)25 | TTCTAGTGCCAATCCATCTCAGA | 64 |
CATGCCAACTTCCAAACAGACT | |||
SMC31CUQ | (TC)10 (AC)22 | CATGCCAACTTCCAATACAGACT | 62 |
AGTGCCAATCCATCTCAGAGA | |||
SMC334BS | (TG)36 | CAATTCTGACCGTGCAAAGAT | 60 |
CGATGAGCTTGATTGCGAATG | |||
SMC336BS | (TG)23(AG)19 | ATTCTAGTGCCAATCCATCTCA | 62 |
CATGCCAACTTCCAAACAGAC | |||
SMC36BUQ | (TTG)7 | GGGTTTCATCTC TAGCCTACC | 64 |
TCAGTAGCAGAGTCAGACGCTT | |||
SMC486CG | (CA)34 | GAAATTGCCTCCCAGGATTA | 58 |
CCAACTTGAGAATTGAGATTCG | |||
SMC569CS | (TG)37 | GCGATGGTTCCTATGCAACTT | 62 |
TTCGTGGCTGAGATTCACACTA | |||
SMC7CUQ | (CA)10 (C)4 | GCCAAAGCAAGGGTCACTAGA | 60 |
AGCTCTATCAGTTGAAACCGA | |||
SMC597CS | (AG)31 | GCACACCACTCGAATAACGGAT | 64 |
AGTATATCGTCCCTGGCATTCA | |||
SMC703BS | (CA)12 | GCCTTTCTCCAAACCAATTAGT | 62 |
GTTGTTTATGGAATGGTGAGGA | |||
SMC851MS | (AG)29 | ACTAAAATGGCAAGGGTGGT | 58 |
CGTGAGCCCACATATCATGC | |||
mSSCIR66 | (GT)43GC (GT)6 | AGGTGATTTAGCAGCATA | 48 |
CACAAATAAACCCAATGA | |||
mSSCIR3 | (GT)28 | ATAGCTCCCACACCAAATGC | 60 |
GGACTACTCCACAATGATGC | |||
SMC1751CL | (TGC)7 | GCCATGCCCATGCTAAAGAT | 60 |
ACGTTGGTCCCGGAACCG | |||
SMC22DUQ | (CAG)5C (AGG)5 | CCATTCGACGAAAGCGTCCT | 62 |
CAAGCGTTGTGCTGCCGAGT | |||
mSSCIR43 | (GT)3(AT)2(GT)29 | ATTCAACGATTT TCACGAG | 52 |
AACCTAGCAATTTACAAGAG | |||
mSSCIR74 | (CGC)9 | GCGCAAGCCACACTGAGA | 54 |
ACGCAACGCAAAACAACG |
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Pan, Y.-B. Development and Integration of an SSR-Based Molecular Identity Database into Sugarcane Breeding Program. Agronomy 2016, 6, 28. https://doi.org/10.3390/agronomy6020028
Pan Y-B. Development and Integration of an SSR-Based Molecular Identity Database into Sugarcane Breeding Program. Agronomy. 2016; 6(2):28. https://doi.org/10.3390/agronomy6020028
Chicago/Turabian StylePan, Yong-Bao. 2016. "Development and Integration of an SSR-Based Molecular Identity Database into Sugarcane Breeding Program" Agronomy 6, no. 2: 28. https://doi.org/10.3390/agronomy6020028