Genome-Wide Identification, Expression and Interaction Analyses of PP2C Family Genes in Chenopodium quinoa
Abstract
:1. Introduction
2. Results
2.1. Identification and Basic Information of PP2C Genes in Quinoa
2.2. Phylogenetic Analysis of CqPP2C Genes
2.3. Gene Structural and Conserved Domain Analyses of CqPP2Cs
2.4. Chromosomal Location and Duplication of CqPP2C Genes
2.5. Cis-Acting Elements Analysis
2.6. Expression of CqPP2C Genes in Different Quinoa Tissues
2.7. Expression Patterns of CqPP2C Genes under Stress Conditions
2.8. Protein Interaction between Subfamily A CqPP2Cs and CqSnRK2s
3. Discussion
4. Materials and Methods
4.1. Identification of the PP2C Gene Family in Quinoa
4.2. Evolutionary Relationship of the PP2C Gene Family
4.3. Gene Structure and Protein Conserved Motif Analysis
4.4. Chromosomal Location and Gene Duplication Analysis
4.5. Analysis of Cis-Acting Elements in the Promoter Regions
4.6. Analysis of CqPP2C Gene Expression Patterns
4.7. Quinoa Treatment and RNA Extraction
4.8. qRT-PCR Analysis
4.9. Yeast Two-Hybrid Assays
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Yang, D.; Zhang, X.; Cao, M.; Yin, L.; Gao, A.; An, K.; Gao, S.; Guo, S.; Yin, H. Genome-Wide Identification, Expression and Interaction Analyses of PP2C Family Genes in Chenopodium quinoa. Genes 2024, 15, 41. https://doi.org/10.3390/genes15010041
Yang D, Zhang X, Cao M, Yin L, Gao A, An K, Gao S, Guo S, Yin H. Genome-Wide Identification, Expression and Interaction Analyses of PP2C Family Genes in Chenopodium quinoa. Genes. 2024; 15(1):41. https://doi.org/10.3390/genes15010041
Chicago/Turabian StyleYang, Dongdong, Xia Zhang, Meng Cao, Lu Yin, Aihong Gao, Kexin An, Songmei Gao, Shanli Guo, and Haibo Yin. 2024. "Genome-Wide Identification, Expression and Interaction Analyses of PP2C Family Genes in Chenopodium quinoa" Genes 15, no. 1: 41. https://doi.org/10.3390/genes15010041
APA StyleYang, D., Zhang, X., Cao, M., Yin, L., Gao, A., An, K., Gao, S., Guo, S., & Yin, H. (2024). Genome-Wide Identification, Expression and Interaction Analyses of PP2C Family Genes in Chenopodium quinoa. Genes, 15(1), 41. https://doi.org/10.3390/genes15010041