Optimization of HPC Use for 3D High Resolution Urban Air Quality Assessment and Downstream Services
Abstract
:1. Introduction
1.1. General Context and Motivations
1.2. The PMSS Modeling System
- A first guess computation based on the interpolation of heterogeneous meteorological input data, a mix of surface and profile measurements, and/or possibly meso-scale model outputs;
- The modification of the first guess using analytical zones defined around isolated buildings or within groups of buildings, based the approach originally proposed by [6];
- The mass-consistency (with impermeability condition at the ground and buildings) obtained by minimizing the difference of the wind field of the second step over the volume of the domain under the mass conservation constraint. The effect of atmospheric stability on the flow around obstacles is considered through a coefficient α applied to the vertical wind component terms during the minimizing process [12].
1.3. The Different Type of High Resolution Air Quality Modeling Applications
2. Long Term Air Quality Assessment in Urban Areas
2.1. Why Is HPC Used?
2.1.1. Complex Geometry
2.1.2. Unsteady Meteorology and Unsteady Emissions
Steady versus Unsteady Approaches
Input Data Cross-Variability
2.1.3. Purifying Systems
2.1.4. Numerous Scenarios
2.1.5. Domain Extents
2.2. Annual Impact on a Coastal City with Very Complex Terrain—HPC Use Optimization with Classification
2.2.1. Presentation and Objectives
2.2.2. Model Performance without Classification
- Different neighborhoods, in order to evaluate the distribution of the concentrations, and to better consider the impact of the topography;
- Major road axes crossing the territory, and those with a canyon-type;
- The acquisition of measurements in the vicinity of atypical sources of emissions (proximity to heliports, gas stations, cruise ships quays, tunnel portals, etc.).
2.2.3. Results with SOMs Classification
2.3. Grenoble Case—Validation with High Density Sensors Network
2.3.1. Context and Model Setup
2.3.2. Results
2.4. Rome Case
2.4.1. Context and Model Setup
2.4.2. Results
3. REX from Different Forecast Systems
3.1. Paris Forecast System
3.1.1. Context and Model Setup
3.1.2. Results
3.2. Antony Forecast System
3.2.1. Context and Model Setup
3.2.2. CPU Time Performance and Optimization
4. CPU Demand Analysis and Estimation
5. Discussion
- -
- Classification with SOMs method to reduce the number of days to be considered. The study provides the quantification of the classification effect on annual average concentration and, more challengingly, on percentiles;
- -
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
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Station | Mean Observation (µg/m3) | Mean Model (µg/m3) | Bias (µg/m3) | RMSE (µg/m3) | r |
---|---|---|---|---|---|
Station 1 * | 27.9 | 21.4 | −6.8 | 15.46 | 0.78 |
Station 2 | 41.3 | 33.7 | −7.6 | 24.44 | 0.56 |
Station 3 * | 20.4 | 20.2 | −0.4 | 5.33 | 0.95 |
Station 4 | 50.8 | 52.9 | 2.2 | 20.89 | 0.68 |
Station 5 | 35.3 | 32.8 | −2.3 | 20.10 | 0.57 |
Setup | c1 | Wind speed, direction, humidity, and temperature |
c2 | Wind speed, direction, humidity, temperature, and background concentration (PM10, PM25, NO, NO2, O3) | |
Reconstruction | m1 | A day is equal to the day associated with its representative among the modelled days |
m2 | A day is equal to the weighted sum of the modelled days | |
Nc | 5 × 5 | |
10 × 10 |
Station | Mean Observation (µg/m3) | Mean Model (µg/m3) | Bias (µg/m3) | RMSE (µg/m3) | r |
---|---|---|---|---|---|
Grenoble_Boulevards | 64.9 | 76.1 | 11.2 | 19.9 | 0.74 |
MC_GRE_JJaures | 53.4 | 61.0 | 7.6 | 13.5 | 0.84 |
MC_GRE_JPain | 76.5 | 72.9 | −3.6 | 24.7 | 0.73 |
MC_GRE_JPerrot | 40.4 | 61.0 | 20.6 | 23.2 | 0.85 |
MC_GRE_Leclerc | 52.9 | 45.6 | −7.3 | 18.1 | 0.77 |
MC_GRE_VHugo | 62.0 | 63.6 | 1.6 | 16.2 | 0.76 |
Mob_Grenoble_caserne_Bonne | 53.8 | 53.7 | −0.1 | 8.8 | 0.90 |
Station | Mean Observation (µg/m3) | Mean Model (µg/m3) | Bias (µg/m3) | RMSE (µg/m3) | r |
---|---|---|---|---|---|
Magna Grecia | 65.2 | 61.6 | −3.6 | 18.78 | 0.56 |
Period | 5 Months | 5 Days | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Obs | Model Config 1 | Model Config 1 Upwind Background | Model Config 1 | Model Config 2 | |||||||||||||
Mean | Mean | RMSE | Bias | r | Mean | RMSE | Bias | r | Mean | RMSE | Bias | r | Mean | RMSE | Bias | r | |
NO2_AUT | 81.6 | 124.4 | 77.2 | 43.7 | 0.34 | 103.4 | 69.2 | 31.4 | 0.35 | 127.3 | 93.6 | 53.2 | −0.02 | 88.5 | 31.1 | 15.7 | 0.62 |
NO2_BONAP | 48.5 | 67.7 | 22.2 | 12.1 | 0.65 | 44.8 | 19.9 | −0.2 | 0.60 | 74.8 | 28.1 | 21.3 | 0.84 | 55.5 | 14.2 | 5.0 | 0.82 |
NO2_CELES | 58.7 | 81.7 | 26.1 | 18.6 | 0.80 | 55.8 | 19.9 | 6.6 | 0.77 | 71.5 | 24.6 | 19.3 | 0.80 | 58.9 | 14.2 | 6.5 | 0.77 |
NO2_ELYS | 47.5 | 73.1 | 36.5 | 25.9 | 0.54 | 57.6 | 30.1 | 13.7 | 0.48 | 70.1 | 33.0 | 24.9 | 0.52 | 66.2 | 29.4 | 21.2 | 0.72 |
NO2_HAUS | 51.6 | 66.3 | 28.1 | 15.1 | 0.66 | 51.5 | 23.0 | 2.9 | 0.63 | 82.3 | 41.4 | 32.5 | 0.51 | 63.8 | 25.8 | 14.0 | 0.58 |
NO2_OPERA | 64.9 | 99.9 | 47.5 | 35.5 | 0.66 | 81.9 | 39.5 | 23.4 | 0.63 | 104.7 | 54.5 | 43.3 | 0.56 | 94.6 | 45.1 | 33.5 | 0.68 |
NO2_PA04C * | 39.3 | 46.9 | 17.9 | 7.8 | 0.61 | 33.8 | 16.7 | −4.3 | 0.55 | 54.2 | 23.1 | 15.2 | 0.47 | 33.2 | 11.6 | −6.3 | 0.78 |
NO2_PA07 * | 34.8 | 51.1 | 29.4 | 16.4 | 0.35 | 37.6 | 25.8 | 4.2 | 0.28 | 57.9 | 31.5 | 25.7 | 0.67 | 36.3 | 18.1 | 3.9 | 0.61 |
NO2_PA12 * | 38.2 | 40.8 | 17.1 | 3.0 | 0.58 | 28.2 | 19.1 | −9.2 | 0.53 | 46.3 | 13.4 | 8.7 | 0.81 | 26.2 | 13.7 | −11.4 | 0.87 |
NO2_PA13 * | 35.8 | 38.4 | 16.2 | 3.0 | 0.58 | 26.1 | 18.7 | −9.2 | 0.52 | 41.2 | 13.0 | 5.8 | 0.73 | 25.1 | 13.7 | −10.5 | 0.82 |
NO2_PA18 * | 41.5 | 34.9 | 14.6 | −5.2 | 0.72 | 26.7 | 23.2 | −17.4 | 0.64 | 35.3 | 9.2 | −1.8 | 0.80 | 19.2 | 22.0 | −17.7 | 0.68 |
PM10_AUT | 37.2 | 51.0 | 29.9 | 14.3 | 0.44 | 44.7 | 27.1 | 10.1 | 0.43 | 53.1 | 35.5 | 18.4 | 0.31 | 38.8 | 19.2 | 4.4 | 0.45 |
PM10_ELYS | 31.0 | 36.6 | 16.1 | 5.3 | 0.55 | 31.7 | 14.7 | 0.9 | 0.54 | 35.1 | 21.9 | 8.9 | 0.43 | 32.0 | 18.3 | 5.7 | 0.47 |
PM10_HAUS | 30.6 | 34.4 | 15.1 | 4.0 | 0.56 | 29.7 | 13.9 | −0.2 | 0.53 | 37.1 | 18.4 | 8.5 | 0.72 | 30.5 | 13.1 | 1.7 | 0.71 |
PM10_OPERA | 29.7 | 41.0 | 19.0 | 11.7 | 0.63 | 35.7 | 16.1 | 7.5 | 0.61 | 41.8 | 24.3 | 14.2 | 0.64 | 37.0 | 20.2 | 9.4 | 0.60 |
PM10_PA04C * | 21.3 | 28.9 | 16.3 | 7.9 | 0.48 | 24.7 | 14.5 | 3.7 | 0.42 | 28.7 | 19.2 | 10.4 | 0.69 | 21.6 | 13.2 | 2.9 | 0.67 |
PM10_PA18 * | 21.1 | 17.9 | 8.4 | −2.5 | 0.76 | 23.5 | 11.4 | −6.7 | 0.67 | 15.9 | 6.4 | −1.5 | 0.81 | 9.2 | 12.7 | −8.3 | 0.51 |
Paris | Coastal City | Grenoble | Antony | Rome | |||
---|---|---|---|---|---|---|---|
Variable | Short Name | Unit | |||||
Domain X-axis dimension | Lx | km | 10 | 3.6 | 1.7 | 4.3 | 12 |
Domain Y-axis dimension | Ly | km | 13 | 4.6 | 1.8 | 4.8 | 12 |
Horizontal resolution | dx | m | 3 | 3 | 3 | 4 | 4 |
Number of tiles | 120 | 9 | 1 | 9 | 36 | ||
Number of line sources per unit area | nblin | km−2 | 327.7 | 1078.6 | 260.8 | 454.4 | 513.9 |
Number of emitted particles is function of mass rate | no | no | no | yes | yes | ||
Kernel method | no | no | no | no | yes | ||
Emission time step | dtmin | s | 2 | 10 | 1 | 10 | 100 |
Synchronisation time step | dtsync | s | 6 | 5 | 5 | 10 | 5 |
Number of cores | 480 | 240 | 30 | 10 | 180 | ||
Machine | CALMIP | CALMIP | Server 1 | Server 2 | CALMIP | ||
CPU time for 24 h (PSPRAY only) | hour | 6.0 | 1.4 | 6.9 | 5.0 | 3.0 | |
Number of hour·core for 24 h | hour·core | 2880 | 333 | 208 | 50 | 540 | |
Number of hour·core per day and per km2 | CPU_cost | hour·core. km−2·day−1 | 22.2 | 20.1 | 68.0 | 2.4 | 3.8 |
CPU_cost estimation = f(nblin/dtmin/dtsync/dx2) | CPU_cost_estim1 | hour·core·km−2·day−1 | 22.8 | 18.0 | 43.5 | 2.1 | 0.5 |
CPU_cost estimation = f(nblin/dtmin/dtsync/) | CPU_cost_estim2 | hour·core·km−2·day−1 | 22.4 | 17.7 | 42.8 | 3.7 | 0.8 |
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Nibart, M.; Ribstein, B.; Ricolleau, L.; Tinarelli, G.; Barbero, D.; Albergel, A.; Moussafir, J. Optimization of HPC Use for 3D High Resolution Urban Air Quality Assessment and Downstream Services. Atmosphere 2021, 12, 1410. https://doi.org/10.3390/atmos12111410
Nibart M, Ribstein B, Ricolleau L, Tinarelli G, Barbero D, Albergel A, Moussafir J. Optimization of HPC Use for 3D High Resolution Urban Air Quality Assessment and Downstream Services. Atmosphere. 2021; 12(11):1410. https://doi.org/10.3390/atmos12111410
Chicago/Turabian StyleNibart, Maxime, Bruno Ribstein, Lydia Ricolleau, Gianni Tinarelli, Daniela Barbero, Armand Albergel, and Jacques Moussafir. 2021. "Optimization of HPC Use for 3D High Resolution Urban Air Quality Assessment and Downstream Services" Atmosphere 12, no. 11: 1410. https://doi.org/10.3390/atmos12111410