Retinal Image Analysis for Diabetes-Based Eye Disease Detection Using Deep Learning
Abstract
:1. Introduction
- Hard exudates are bright yellow-colored spots with a waxy appearance on the retina, which are formed because of the leakage of blood from vessels.
- Soft exudates are white lesions on the retina that occur due to occlusion of the arteriole.
- Hemorrhages develop due to blood leakage from damaged vessels and appear as dark red spots.
- Microaneurysms developed due to distortions in the boundary of blood vessels and appear as small red dots on the retina.
- Early and automated detection of diabetes-based eye diseases regions using machine learning-based segmentation is a complex task. In the presented methodology, we used the FRCNN-based method for localization of disease regions. Our findings conclude that the combination of FRCNN with FKM clustering results in accurate localization of the affected areas, which ensure the precise recognition of the disease in an automated manner.
- To accomplish the human-level performance over the challenging dataset i.e., ORIGA and MESSIDOR, the retinal images are represented by the FRCNN deep features, that are then segmented through the FKM clustering.
- The proposed method can detect the signs of disease including early signs simultaneously and has no issue in learning to detect an image of a healthy eye.
- The available datasets do not have bbox ground truths, so first, we developed the bbox annotations from given ground truths of the dataset which are necessary for the training of FRCNN.
2. Proposed Methodology
2.1. Ground Truth Generation
2.2. Localization Phase
2.2.1. Localization of DR Regions
2.2.2. Localization of DME Region
2.2.3. Localization of Glaucoma Regions
Feature Extraction
Multi-Task Loss
SGD Hypermeters
Testing through FRCNN
2.3. Segmentation of Regions through Fuzzy K-Means Clustering
- (1)
- Specify the number of clusters
- (2)
- Set Cj(0) to the initial clusters.
- (3)
- Compute the membership of all datapoints for each using following equation:
- (4)
- Update cluster centers using following equation:
- (5)
- Repeat from step 3, till the FKM is converged (the centroids updated between two passes is not greater than ε, the defined sensitivity threshold).
3. Experimental Results
3.1. Datasets
3.2. Evaluation Metrics
3.3. Results
3.3.1. Evaluation of FRCNN
3.3.2. Localization of DR Regions
3.3.3. Localization of DME Regions
3.3.4. Localization of Glaucoma Regions
3.3.5. Segmentation Results
3.4. Comparative Studies
4. Discussion
5. Conclusions
Author Contributions
Funding
Conflicts of Interest
References
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---|---|---|---|
Pan et al. [15] | The model is based on DenseNet, ResNet50, and VGG16 models | Detection of DR lesions and the method is computationally robust. | The method may not classify microaneurysms efficiently because these are easily misclassified under the pervading presence of fluorescein |
Zeng et al. [28] | A Siamese-like CNN framework by employing the concept of weigh-sharing layers based on Inception V3. | The work exhibits promising results for DR prediction with kappa score of 0.829. | It may not perform well for those sample databases where paired fundus images are not available. |
Qummar et al. [14] | Five different frameworks of CNN named Dense169, Inception V3, Resnet50, Dense121, and Xception were employed. | To locate and classify the DR lesions into different classes according to the severity level of moles. | The method suffers from high computational cost. |
Zhang et al. [40] | A DL framework named DeepDR was presented for DR detection. In addition, a new database for DR labelled DR images was also introduced. | The proposed network has attained the sensitivity value of 97.5%, along with the specificity value of 97.7%. | The introduced model needs to be evaluated on more complex and larger dataset. |
Torre et al. [41] | A DL based method was used to predict the expected DR class and assign scores to individual pixels to exhibit their relevance in each input sample. The assigned score was employed to take final classification decision. | The introduced DL framework acquired more than 90% of sensitivity and specificity values. | The evaluation performance of the presented algorithm can be improved through appropriate measures. |
Rekhi et al. [2] | The method was based on geometrical, morphological, and orientation features. The classification was performed through SVM. | Grading and classification of DME from fundus images with an accuracy of 92.11%. | The detection accuracy needs further improvement. |
Kunwar et al. [5] | The method was based on texture features and the SVM classifier. | high-risk DME detection with accuracy of 86%. | Experiments were performed on small dataset. |
Marin et al. [30] | The method was based on thresholding and regularized regression techniques. | DME risk detection with 0.90 sensitivity. | The detection performance requires improvement. |
Perdomo et al. [31] | The presented method was composed of two-stage CNNs | The method detects regions of interest in the retinal image and then predicts its class of DME | The technique is computationally complex. |
Jiang et al. [32] | The end-to-end Region- based Convolutional Neural Network was used for OD and OC segmentation. | OD and OC segmentation with AUC of 0.901. The method is robust to glaucoma detection. | The method is computationally complex because it employs two separate RCNNs to compute the bboxes of the OC and OD, respectively. |
Bajwa et al. [37] | The localization was achieved through RCNN, while the other stage used deep CNN to classify the computed disc into glaucomatous or healthy. | Localization and classification of glaucoma with AUC of 0.874. | The method is computationally complex as it takes two-stage framework to localize and classify the glaucoma. The performance is affected by increasing the network hierarchy as it results in losing the discriminative set of features. |
Zheng Lu et al. [38] | The Modified U-Net model was improved by minimizing the original U-shape structure through adding 2-dimensional convolutional layer. | Before OD segmentation, the ground-truths were generated through the GrabCut method. | The presented technique requires less training, however, shows lower segmentation accuracy as compare latest approaches because of missing ground truths. |
Ramani et al. [39] | The region-based pixel density calculation method based on Circular Hough Transform with Hough Peak Value Selection and Red Channel Super-pixel method. | The technique is robust and efficient to optic disc segmentation. | The detection accuracy is affected over the images having pathological distractions. |
DR | DME | Glaucoma |
---|---|---|
0. Background 1. Microaneurysms 2. Soft Exudates 3. Hard Exudates 4. Hemorrhages | 0. Background 1. Macula Region | 0. Background 1. OD 2. OC |
Dataset | Img1 | Img2 | Img3 | Img4 | Img5 | Img6 | Img7 | Img8 | mAP |
---|---|---|---|---|---|---|---|---|---|
HRF | 0.949 | 0.942 | 0.963 | 0.935 | 0.99 | 0.891 | 0.953 | 0.941 | 0.946 |
DR HAGIS | 0.937 | 0.94 | 0.975 | 0.891 | 0.912 | 0.939 | 0.99 | 0.933 | 0.940 |
ORIGA | 0.941 | 0.935 | 0.899 | 0.876 | 0.97 | 0.99 | 0.94 | 0.95 | 0.938 |
DR Signs | Acc | SP | SE |
---|---|---|---|
Hard Exudates | 0.958 | 0.941 | 0.957 |
Soft Exudates | 0.943 | 0.961 | 0.955 |
Micro aneurysms | 0.957 | 0.954 | 0.943 |
Hemorrhages | 0.952 | 0.96 | 0.951 |
Database | Acc | Dc | SP | SE |
---|---|---|---|---|
HRF | 0.958 | 0.952 | 0.97 | 0.957 |
DR HAGIS | 0.943 | 0.89 | 0.961 | 0.955 |
ORIGA | 0.957 | 0.943 | 0.954 | 0.943 |
Average | 0.9526 | 0.9283 | 0.961 | 0.951 |
Technique | SP | SE | Acc | AUC |
---|---|---|---|---|
Zeng et al. [28] | 0.635 | 0.77 | - | 0.94 |
Gulshan et al. [57] | 0.91 | - | 0.913 | 0.96 |
Zhou et al. [58] | 0.863 | 0.995 | - | - |
Kaur et al. [59] | 0.96 | 0.88 | 0.93 | - |
Colomer et al. [61] | 0.818 | 0.81 | 0.93 | - |
Abbas et al. [60] | 0.94 | 0.92 | - | 0.92 |
Proposed | 0.965 | 0.961 | 0.95 | 0.967 |
Method | SE | SP | Acc |
---|---|---|---|
Li et al. [62] | 0.70 | 0.76 | 0.912 |
Deepak et al. [63] | 0.95 | 0.90 | - |
Medhi et al. [64] | 0.95 | 0.95 | - |
Rekhi et al. [2] | - | - | 0.921 |
Lim et al. [65] | 0.80 | 0.90 | - |
Rahim et al. [66] | 0.85 | 0.55 | - |
Syed et al. [67] | 0.96 | 0.95 | 0.935 |
Varadarajan et al. [68] | 0.85 | 0.80 | - |
Xiaodong et al. [69] | 0.959 | 0.97 | - |
Proposed | 0.96 | 0.958 | 0.958 |
Method | Year | Dataset | SE | SP | AUC | Dc | Time |
---|---|---|---|---|---|---|---|
Liao et al. [70] | 2019 | ORIGA | - | - | 0.88 | 0.9 | - |
Chen et al. [71] | 2015 | ORIGA | - | - | 0.838 | - | - |
Xu et al. [72] | 2013 | ORIGA | 0.58 | - | 0.823 | - | - |
Li et al. [73] | 2016 | ORIGA | - | - | 0.8384 | - | - |
Bajwa et al. [37] | 2019 | ORIGA | 0.71 | - | 0.868 | - | - |
Ramani et al. [39] | 2020 | HRF | 0.849 | 0.999 | - | - | 1.49 s |
N.B Parakash et al. [74] | 2017 | HRF | 0.7025 | 0.997 | - | - | - |
Krishna et al. [12] | 2019 | DR HAGIS | 0.94 | - | - | - | - |
Proposed | ORIGA | 0.941 | 0.945 | 0.94 | 0.943 | 0.9 s | |
HRF | 0.95 | 0.96 | 0.963 | 0.952 | 0.9 s | ||
DR HAGIS | 0.945 | 0.941 | 0.94 | 0.89 | 0.9 s |
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Nazir, T.; Irtaza, A.; Javed, A.; Malik, H.; Hussain, D.; Naqvi, R.A. Retinal Image Analysis for Diabetes-Based Eye Disease Detection Using Deep Learning. Appl. Sci. 2020, 10, 6185. https://doi.org/10.3390/app10186185
Nazir T, Irtaza A, Javed A, Malik H, Hussain D, Naqvi RA. Retinal Image Analysis for Diabetes-Based Eye Disease Detection Using Deep Learning. Applied Sciences. 2020; 10(18):6185. https://doi.org/10.3390/app10186185
Chicago/Turabian StyleNazir, Tahira, Aun Irtaza, Ali Javed, Hafiz Malik, Dildar Hussain, and Rizwan Ali Naqvi. 2020. "Retinal Image Analysis for Diabetes-Based Eye Disease Detection Using Deep Learning" Applied Sciences 10, no. 18: 6185. https://doi.org/10.3390/app10186185
APA StyleNazir, T., Irtaza, A., Javed, A., Malik, H., Hussain, D., & Naqvi, R. A. (2020). Retinal Image Analysis for Diabetes-Based Eye Disease Detection Using Deep Learning. Applied Sciences, 10(18), 6185. https://doi.org/10.3390/app10186185