Taxonomy and Phylogeny of Eight New Acrophialophora Species (Sordariales, Chaetomiaceae) from China
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sampling, Fungal Isolation, and Morphology
2.2. DNA Extraction, PCR Amplifications, and Sequencing
2.3. Phylogenetic Analyses
3. Results
3.1. Phylogeny Analysis
3.2. Taxonomy
4. Discussion
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Species | Strains | GenBank Accession Numbers | |||
---|---|---|---|---|---|
ITS | tub2 | LSU | RPB2 | ||
Acrophialophora acuticonidiata | CGMCC 3.17245 | KJ026975 | KJ147441 | — | — |
Acrophialophora angustiphialis | CGMCC 3.15258 | KJ026972 | KJ147438 | — | — |
Acrophialophora biformis | GZDXIFR-H28-1 | DQ191963 | — | — | — |
Acrophialophora cinerea | GZDXIFR-H-57-1 | DQ243694 | KP143110 | OP419973 | OP886702 |
Acrophialophora curticatenata | GZUIFR-H125-2 | EU004811 | — | — | — |
Acrophialophora curvata | GZUIFR 22.406 | OP454351 | OP547306 | OP454363 | OP802834 |
Acrophialophora curvata | GZUIFR 22.407 | OP454352 | OP547307 | OP454364 | OP802835 |
Acrophialophora curvata | GZUIFR 22.408 | OP454353 | OP547308 | OP454365 | OP802836 |
Acrophialophora ellipsoidea | CBS 102.61 | MK926786 | MK926886 | MK926786 | MK876748 |
Acrophialophora fujianensis | GZUIFR 22.403 | OP454345 | OP536984 | OP454372 | OP820579 |
Acrophialophora fujianensis | GZUIFR 22.404 | OP454346 | OP536985 | OP454373 | OP820580 |
Acrophialophora fujianensis | GZUIFR 22.405 | OP454347 | OP536986 | OP454374 | OP820581 |
Acrophialophora furcata | GZDXIFR-H-104-1 | DQ243695 | KP143113 | OP456145 | OP886703 |
Acrophialophora fusispora | CBS 380.55 | MK926788 | MK926888 | MK926788 | MK876750 |
Acrophialophora guangdongensis | GZUIFR 22.394 T | OP454339 | OP547315 | OP454369 | OP491393 |
Acrophialophora guangdongensis | GZUIFR 22.395 | OP454340 | OP547316 | OP454370 | OP491394 |
Acrophialophora guangdongensis | GZUIFR 22.396 | OP454341 | OP547317 | OP454371 | OP491395 |
Acrophialophora hechuanensis | GZUIFR-H08-1 | MK926789 | MK926889 | MK926789 | MK876751 |
Acrophialophora jiangsuensis | GZUIFR HC48.1 | KF719171 | KP143112 | OP456146 | OP491392 |
Acrophialophora jodhpurensis | CBS 602.69 | MK926790 | MK926890 | MK926790 | MK876752 |
Acrophialophora levis | CBS 484.70 | KP233038 | KP233044 | KM995840 | — |
Acrophialophora liboensis | CGMCC 3.18309 | KP192127 | KP999978 | OP456147 | OP886704 |
Acrophialophora longicatenata | GZUIFR 22.412 T | OP454357 | OP547309 | OP454378 | OP834081 |
Acrophialophora longicatenata | GZUIFR 22.413 | OP454358 | OP547310 | OP454379 | OP834082 |
Acrophialophora longicatenata | GZUIFR 22.414 | OP454359 | OP547311 | OP454380 | OP834083 |
Acrophialophora major | GZUIFR-H57-2 | MK926792 | MK926892 | MK926792 | MK876754 |
Acrophialophora minuta | GZUIFR 22.400 T | OP454342 | OP547318 | OP454366 | OP880249 |
Acrophialophora minuta | GZUIFR 22.401 | OP454343 | OP547319 | OP454367 | OP880250 |
Acrophialophora minuta | GZUIFR 22.402 | OP454344 | OP547320 | OP454368 | OP880251 |
Acrophialophora multiforma | GZUIFR 22.397 T | OP454336 | OP547321 | OP454360 | OP880243 |
Acrophialophora multiforma | GZUIFR 22.398 | OP454337 | OP547322 | OP454361 | OP880244 |
Acrophialophora multiforma | GZUIFR 22.399 | OP454338 | OP547323 | OP454362 | OP880245 |
Acrophialophora nainiana | CBS 100.60 | MK926793 | MK926893 | MK926793 | MK876755 |
Acrophialophora rhombica | GZUIFR 22.415 T | OP454354 | OP731571 | OP454381 | OP834084 |
Acrophialophora rhombica | GZUIFR 22.416 | OP454355 | OP731572 | OP454382 | OP834085 |
Acrophialophora rhombica | GZUIFR 22.417 | OP454356 | OP731573 | OP454383 | OP834086 |
Acrophialophora seudatica | CBS 916.79 | LN736030 | LN736032 | LN736031 | — |
Acrophialophora teleoafricana | CBS 281.79 | MK926795 | MK926895 | MK926795 | MK876757 |
Acrophialophora yunnanensis | GZUIFR 22.409 T | OP454348 | OP547312 | OP454375 | OP880246 |
Acrophialophora yunnanensis | GZUIFR 22.410 | OP454349 | OP547313 | OP454376 | OP880247 |
Acrophialophora yunnanensis | GZUIFR 22.411 | OP454350 | OP547314 | OP454377 | OP880248 |
Chrysocorona lucknowensis | CBS 727.71 T | MK926813 | MK926913 | MK926813 | MK876773 |
ITS | LSU | tub2 | RPB2 | |
---|---|---|---|---|
ML analysis | K3P+G4 | F81+F+I | HKY+F+G4 | GTR+F+G4 |
BI analysis | K2P+G4 | F81+F+I | HKY+F+G4 | GTR+F+G4 |
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Peng, L.; Zhang, Y.-W.; Wang, H.-Y.; Dong, C.-B.; Chen, W.-H.; Liang, J.-D.; Han, Y.-F. Taxonomy and Phylogeny of Eight New Acrophialophora Species (Sordariales, Chaetomiaceae) from China. J. Fungi 2023, 9, 645. https://doi.org/10.3390/jof9060645
Peng L, Zhang Y-W, Wang H-Y, Dong C-B, Chen W-H, Liang J-D, Han Y-F. Taxonomy and Phylogeny of Eight New Acrophialophora Species (Sordariales, Chaetomiaceae) from China. Journal of Fungi. 2023; 9(6):645. https://doi.org/10.3390/jof9060645
Chicago/Turabian StylePeng, Lan, Yan-Wei Zhang, Hai-Yan Wang, Chun-Bo Dong, Wan-Hao Chen, Jian-Dong Liang, and Yan-Feng Han. 2023. "Taxonomy and Phylogeny of Eight New Acrophialophora Species (Sordariales, Chaetomiaceae) from China" Journal of Fungi 9, no. 6: 645. https://doi.org/10.3390/jof9060645