DNA Barcode Reference Library and Undetected Diversity of Fish Species in the Yuanjiang River, China
Abstract
1. Introduction
2. Materials and Methods
2.1. Sample Collection
2.2. Genomic Extraction and Sequencing
2.3. Genetic Distance Calculations
2.4. Sequence-Based Species Delimitation
2.5. Cryptic Diversity Analyses
3. Results
3.1. Sequence Information
3.2. Genetic Distance Calculation
3.3. Results of Sequence-Based Species Delimitation
3.4. Cryptic Diversity
4. Discussion
4.1. DNA Barcode Reference Library of Fish Species in the Yuanjiang River
4.2. Cryptic Diversity
4.3. Implications for the Yuanjiang River Ichthyofauna
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Conflicts of Interest
References
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Mean% | SE | Min% | Max% | |
---|---|---|---|---|
Within species | 0.47 | 0.0003 | 0 | 10.22 |
Within genus | 4.48 | 0.0032 | 3.38 | 23.64 |
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Shi, X.; Kou, C.; He, C.; Deng, H.; Yang, H.; Li, X.; Liu, M.; Liu, Y.; Li, J.; Chen, W. DNA Barcode Reference Library and Undetected Diversity of Fish Species in the Yuanjiang River, China. Fishes 2025, 10, 418. https://doi.org/10.3390/fishes10080418
Shi X, Kou C, He C, Deng H, Yang H, Li X, Liu M, Liu Y, Li J, Chen W. DNA Barcode Reference Library and Undetected Diversity of Fish Species in the Yuanjiang River, China. Fishes. 2025; 10(8):418. https://doi.org/10.3390/fishes10080418
Chicago/Turabian StyleShi, Xian, Chunni Kou, Chengdong He, Hong Deng, Hongfu Yang, Xinhui Li, Mingdian Liu, Yaqiu Liu, Jie Li, and Weitao Chen. 2025. "DNA Barcode Reference Library and Undetected Diversity of Fish Species in the Yuanjiang River, China" Fishes 10, no. 8: 418. https://doi.org/10.3390/fishes10080418
APA StyleShi, X., Kou, C., He, C., Deng, H., Yang, H., Li, X., Liu, M., Liu, Y., Li, J., & Chen, W. (2025). DNA Barcode Reference Library and Undetected Diversity of Fish Species in the Yuanjiang River, China. Fishes, 10(8), 418. https://doi.org/10.3390/fishes10080418