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Fishes, Volume 10, Issue 8 (August 2025) – 59 articles

Cover Story (view full-size image): Within species, stunted and non-stunted fish are adapted to different niches. This idea builds on over one hundred years of field and experimental research. The adaptations presented concern morphology, coloration, ecology and behavior, and are chiefly regulated by environmental factors. Adult sizes are linked to individual growth rates, and if fitness is increased by performing a niche shift with effective competition for larger, more energy-rich food items. The fitness of stunted and non-stunted fish may be similar to each other even though the adult sizes are different. The close association between growth rate and adult size is important in fish culture as higher growth leads to earlier maturation. Relationships between environmental factors and ecological adaptations are helpful when making prognoses about fish production in a future climate. View this paper
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17 pages, 2168 KB  
Article
Comparison of Behavioral Traits and Invasion Success Between Two Global Freshwater Fish Invaders—Gambusia holbrooki and Gambusia affinis
by Elizabeth S. Walsh, Jeffrey E. Hill and Quenton M. Tuckett
Fishes 2025, 10(8), 421; https://doi.org/10.3390/fishes10080421 - 21 Aug 2025
Viewed by 291
Abstract
In the early 1900s, eastern mosquitofish (Gambusia holbrooki) and western mosquitofish (Gambusia affinis) were deliberately and globally introduced for the biological control of mosquito larvae. Subsequently, both species developed a reputation for causing impacts on native small-bodied fish, amphibian [...] Read more.
In the early 1900s, eastern mosquitofish (Gambusia holbrooki) and western mosquitofish (Gambusia affinis) were deliberately and globally introduced for the biological control of mosquito larvae. Subsequently, both species developed a reputation for causing impacts on native small-bodied fish, amphibian larvae, and other aquatic species. This led to both species being considered some of the world’s worst invasive species. Due to morphological similarities, organizations worldwide often consider these species jointly when discussing their introduction and impacts. Recent studies suggest these species differ in fundamental ways, which could affect invasion success. Our goal was to compare eastern and western mosquitofish behavior and invasion success. Replicate populations were collected from the U.S. states of Florida (eastern mosquitofish) and Louisiana (western mosquitofish) to assess variation in aggression, boldness, and sociability. Mesocosm trials were used to compare invasion success between species following introduction to an ecosystem occupied by another small-bodied poeciliid. Eastern mosquitofish caused more damage to similar-sized heterospecifics and western mosquitofish exhibited greater boldness. No differences were found in sociability between the two species. In mesocosms, impacts were observed for both mosquitofish species but were greatest for heterospecifics with eastern mosquitofish. This suggests that two invasive species, even with similar life history and morphology, can differ in traits related to invasion success and ecological impacts. It is important to correctly identify mosquitofish species when evaluating their invasion. Full article
(This article belongs to the Section Biology and Ecology)
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27 pages, 6145 KB  
Article
Multi-Voyage Path Planning for River Crab Aquaculture Feeding Boats
by Yueping Sun, Peixuan Guo, Yantong Wang, Jinkai Shi, Ziheng Zhang and De’an Zhao
Fishes 2025, 10(8), 420; https://doi.org/10.3390/fishes10080420 - 20 Aug 2025
Viewed by 291
Abstract
In crab pond environments, obstacles such as long aerobic pipelines, aerators, and ground cages are usually sparsely distributed. Automatic feeding boats can navigate while avoiding obstacles and execute feeding tasks along planned paths, thus improving feeding quality and operational efficiency. In large-scale crab [...] Read more.
In crab pond environments, obstacles such as long aerobic pipelines, aerators, and ground cages are usually sparsely distributed. Automatic feeding boats can navigate while avoiding obstacles and execute feeding tasks along planned paths, thus improving feeding quality and operational efficiency. In large-scale crab pond farming, a single feeding operation often fails to achieve the complete coverage of the bait casting task due to the limited boat load. Therefore, this study proposes a multi-voyage path planning scheme for feeding boats. Firstly, a complete coverage path planning algorithm is proposed based on an improved genetic algorithm to achieve the complete coverage of the bait casting task. Secondly, to address the issue of an insufficient bait loading capacity in complete coverage operations, which requires the feeding boat to return to the loading wharf several times to replenish bait, a multi-voyage path planning algorithm is proposed. The return point of the feeding operation is predicted by the algorithm. Subsequently, the improved Q-Learning algorithm (I-QLA) is proposed to plan the optimal multi-voyage return paths by increasing the exploration of the diagonal direction, refining the reward mechanism and dynamically adjusting the exploration rate. The simulation results show that compared with the traditional genetic algorithm, the repetition rate, path length, and the number of 90° turns of the complete coverage path planned by the improved genetic algorithm are reduced by 59.62%, 1.27%, and 28%, respectively. Compared with the traditional Q-Learning algorithm, average path length, average number of turns, average training time, and average number of iterations planned by the I-QLA are reduced by 20.84%, 74.19%, 48.27%, and 45.08%, respectively. The crab pond experimental results show that compared with the Q-Learning algorithm, the path length, turning times, and energy consumption of the I-QLA algorithm are reduced by 29.7%, 77.8%, and 39.6%, respectively. This multi-voyage method enables efficient, low-energy, and precise feeding for crab farming. Full article
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18 pages, 3063 KB  
Article
Ecosystem Size and Functional Group Relative Abundance Drive Stream Community Body Size Structure
by Jarrett H. Landreth, Brent A. Murry, Katherine A. Adase, Caroline C. Arantes, Dustin M. Smith, David I. Wellman, Jr., James R. Junker, Justin P. F. Pomeranz and Jeff S. Wesner
Fishes 2025, 10(8), 419; https://doi.org/10.3390/fishes10080419 - 20 Aug 2025
Viewed by 293
Abstract
Temperate streams are among the most well-studied ecosystems globally, yet there remains much uncertainty regarding the processes that regulate food web structure. Here we explore the relative contribution of food web composition and watershed factors on inter-stream variation in size spectra slopes (λ). [...] Read more.
Temperate streams are among the most well-studied ecosystems globally, yet there remains much uncertainty regarding the processes that regulate food web structure. Here we explore the relative contribution of food web composition and watershed factors on inter-stream variation in size spectra slopes (λ). Size spectra describe the decrease in abundance with increasing body size of individuals within a community (N∼M λ). We estimated λ for invertebrate, fish, and combined food webs to test effects of functional groups and watershed variables. The mean λ for combined and invertebrate food webs aligned well with theoretic predictions (mean = −2.04 and −2.02 respectively, range =−2.58 to −1.51). In contrast, the mean fish slope was shallower and more variable among sites (mean = −1.85, range = −2.71 to −1.33). Drainage area, a proxy for ecosystem size, was positively related to λ in all three data groupings. The fish-only λs were also positively related to agricultural land cover and negatively associated with the relative abundance of predators and omnivores. These results demonstrate the potential for drainage area to increase the relative abundance of large consumers and highlight the role of functional group dominance. Such insights are difficult to obtain without a size spectrum approach. Full article
(This article belongs to the Section Biology and Ecology)
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13 pages, 18640 KB  
Article
DNA Barcode Reference Library and Undetected Diversity of Fish Species in the Yuanjiang River, China
by Xian Shi, Chunni Kou, Chengdong He, Hong Deng, Hongfu Yang, Xinhui Li, Mingdian Liu, Yaqiu Liu, Jie Li and Weitao Chen
Fishes 2025, 10(8), 418; https://doi.org/10.3390/fishes10080418 - 20 Aug 2025
Viewed by 301
Abstract
The Yuanjiang River, situated in the upper reaches of the Red River, is a crucial component of a biodiversity hotspot in the mountains of southwestern China, supporting a high diversity of fish species. Nevertheless, systematic research on fish diversity in the Yuanjiang River [...] Read more.
The Yuanjiang River, situated in the upper reaches of the Red River, is a crucial component of a biodiversity hotspot in the mountains of southwestern China, supporting a high diversity of fish species. Nevertheless, systematic research on fish diversity in the Yuanjiang River is scarce, scattered, and outdated. In our study, we produced 764 DNA barcodes belonging to 64 fish morphospecies to evaluate fish diversity in the Yuanjiang River. Barcoding gap analysis and DNA-based delimitation approaches achieved a high identification success rate (>93%), indicating that DNA barcoding is a practical approach for delimiting fish in the Yuanjiang River. However, four species were characterized by high levels of intraspecific divergence, generating multiple clades and/or molecular operational taxonomic units (MOTUs), suggesting that these species might comprise undetected species. Meanwhile, two closely related species within the genus Schistura, i.e., S. callichroma and S. caudofurca, cannot be delimited by the DNA barcoding technique, which is indicative of recent speciation. In summary, this study established a reliable DNA barcode reference library for fish species in the Yuanjiang River and revealed previously unknown fish diversity. Full article
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24 pages, 11939 KB  
Article
Spatial Heterogeneity-Based Explainable Machine Learning Methods—Modeling the Relationship Between Yellowfin Tuna Fishery Resources and the Environment in the Pacific Ocean
by Zhoujia Hua, Xiaoming Yang, Menghao Li, Shuyang Feng and Jiangfeng Zhu
Fishes 2025, 10(8), 417; https://doi.org/10.3390/fishes10080417 - 19 Aug 2025
Viewed by 294
Abstract
Yellowfin tuna (Thunnus albacares) constitutes a critical global fishery resource, and its distribution pattern is correlated to varying degrees with the marine environment. This study utilized longline fishing data from the Western and Central Pacific Fisheries Commission (WCPFC) and the Inter-American [...] Read more.
Yellowfin tuna (Thunnus albacares) constitutes a critical global fishery resource, and its distribution pattern is correlated to varying degrees with the marine environment. This study utilized longline fishing data from the Western and Central Pacific Fisheries Commission (WCPFC) and the Inter-American Tropical Tuna Commission (IATTC) spanning 2004 to 2020, categorized by quarter and combined with surface and 0–200 m depth environmental variables. Geographical random forests (GRF) were employed to examine spatially non-stationary relationships between yellowfin tuna resources and environmental factors. Additionally, by integrating GRF with GeoShapley explainable methods, we quantitatively evaluated the mechanistic impacts of environmental drivers on tuna distribution across spatial scales. The findings indicated that (1) the GRF model demonstrated superior performance throughout all four quarters, with the goodness of fit on the 20% test set (R2 = 0.72–0.85) consistently surpassing that of conventional random forest (RF) (R2 = 0.68–0.79) and extreme gradient boosting random forest (XGBRF) (R2 = 0.68–0.80). Moreover, in most cases, it had a lower RMSE and MAE, while effectively addressing spatial heterogeneity issues in yellowfin tuna fishery resources across most regions. (2) GeoShapley spatial explainable analysis revealed distinct environmental drivers, showing that the sea surface temperature and temperature at 105 m depth significantly influenced yellowfin tuna resources across all quarters, following a “high-value promotion, low-value inhibition” pattern, with salinity and dissolved oxygen at 105 m depth in Q2–Q3 and mixed-layer depth in Q3 also demonstrating notable effects. (3) Significant spatiotemporal heterogeneity was observed. The main spatial effects and temperature–depth–locality interactions remained significant throughout the year; mixed-layer depth–locality interactions were prominent in Q1, Q3, and Q4, dissolved oxygen–locality interactions in Q2 and Q4, and 105 m salinity–locality interactions exclusively in Q2. This study used geographical random forests (GRF) to integrate spatial statistics and machine learning to model the relationship between Pacific yellowfin tuna fishery resources and environmental factors. This approach demonstrates potential in improving spatial predictions of heterogeneous tuna resources and may help to identify key environmental drivers influencing their distribution. These findings provide essential insights for the formulation of science-based management strategies for Pacific yellowfin tuna fisheries. Full article
(This article belongs to the Section Environment and Climate Change)
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21 pages, 4317 KB  
Article
Investigating the Impact of six6 Genetic Variation on Morphological Traits in Larvae and Juveniles of European Seabass (Dicentrarchus labrax Linnaeus)
by Marinina Papamichail, Aristotelis Moulistanos, Ioannis Georgatis, Ioustini Vagia, Katerina Tasiouli, Konstantinos Gkagkavouzis, Anastasia Laggis, Nikoleta Karaiskou, Efthimia Antonopoulou, Alexandros Triantafyllidis, Spiros Papakostas and Ioannis Leonardos
Fishes 2025, 10(8), 416; https://doi.org/10.3390/fishes10080416 - 19 Aug 2025
Viewed by 338
Abstract
The European seabass is a key Mediterranean aquaculture species, vital for sustainably meeting rising global protein demands amid declining wild fish stocks. Genetic analyses have identified the six6 gene as a candidate target of domestication and selective breeding, with two SNPs showing significant [...] Read more.
The European seabass is a key Mediterranean aquaculture species, vital for sustainably meeting rising global protein demands amid declining wild fish stocks. Genetic analyses have identified the six6 gene as a candidate target of domestication and selective breeding, with two SNPs showing significant genotypic differences between wild and farmed European seabass populations. Further analyses revealed differential six6 expression between larval and juvenile stages, suggesting a potential developmental role. This study explores associations between these SNPs and important aquaculture traits across early developmental stages. Seabass samples were examined at 34 days post-hatching (dph, larval stage) and 71 dph (juvenile stage). We examined associations between specific six6 SNPs and morphological traits using traditional morphometrics, analyzing 20 and 26 characteristics in the larval and juvenile stages, respectively. Shape and size differences were examined with allometric correction. The six6 gene was primarily associated with body length, height, and caudal fin morphology. Notably, homozygous six6 genotype combinations at the studied SNPs were associated with increased body length in a developmental stage-specific manner. Variation in this gene also appeared to influence eye development in juveniles. These findings offer phenotypic evidence supporting previous genetic and expression studies in European seabass, highlighting their potential applications in fisheries and aquaculture. Full article
(This article belongs to the Section Genetics and Biotechnology)
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20 pages, 5399 KB  
Article
Fish Swimming Behavior and Strategies Under Different Hydrodynamic Conditions in Fishways with Various Vertical Slot Configurations
by Lijian Ouyang, Dongqiu Li, Shihao Cui, Xinyang Wu, Yang Liu, Xiaowei Han, Shengzhi Zhou, Gang Xu, Xinggang Tu, Kang Chen, Carlo Gualtieri and Weiwei Yao
Fishes 2025, 10(8), 415; https://doi.org/10.3390/fishes10080415 - 18 Aug 2025
Viewed by 251
Abstract
Vertical slot fishways are a crucial measure to mitigate the blockage of fish migration caused by hydraulic engineering infrastructures, but their passage efficiency is often hindered by the complex interactions between fish behavior and hydrodynamic conditions. This study combines computational fluid dynamics (CFD) [...] Read more.
Vertical slot fishways are a crucial measure to mitigate the blockage of fish migration caused by hydraulic engineering infrastructures, but their passage efficiency is often hindered by the complex interactions between fish behavior and hydrodynamic conditions. This study combines computational fluid dynamics (CFD) simulations with behavioral laboratory experiments to identify the hydrodynamic characteristics and swimming strategies of three types of fishways—Central Orifice Vertical Slot (COVS), Standard Vertical Slot (SVS), and L-shaped Vertical Slot (LVS)—using the endangered species Schizothorax prenanti from the upper Yangtze River as the study subject. The results revealed that (1) a symmetric and stable flow field was formed in the COVS structure, yet the passage ratio was the lowest (50%); in the SVS structure, high turbulent kinetic energy (peak of 0.03 m2/s2) was generated, leading to a significant increase in the fish’s tail-beat angle and amplitude (p < 0.01), with the passage time extending to 10.2 s. (2) The LVS structure induced a controlled vortex formation and created a reflux zone with low turbulent kinetic energy, facilitating a “wait-and-surge” strategy, which resulted in the highest passage ratio (70%) and the shortest passage time (6.1 s). (3) Correlation analysis revealed that flow velocity was significantly positively correlated with absolute swimming speed (r = 0.80), turbulent kinetic energy, and tail-beat parameters (r > 0.68). The LVS structure achieved the highest passage ratio and shortest transit time for Schizothorax prenanti, demonstrating its superior functionality for upstream migration. This design balances hydrodynamic complexity with low-turbulence refuge zones, providing a practical solution for eco-friendly fishways. Full article
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14 pages, 813 KB  
Article
The Influence of Different Feeding Time Management on the Growth and Stress Response of the African Catfish Clarias gariepinuns (Burchel, 1822) Under Farming Conditions
by Marc-C. Hildebrand, David Runge, Björn Bassmann and Harry W. Palm
Fishes 2025, 10(8), 414; https://doi.org/10.3390/fishes10080414 - 18 Aug 2025
Viewed by 286
Abstract
In this study, the growth and welfare of the African catfish (Clarias gariepinus, Burchell 1822) were investigated under industrial farming conditions. For this purpose, the growing success (cm, g) and typical stress related parameters (glucose-, lactate-, cortisol-concentrations, growth hormone, HSI-liver index) [...] Read more.
In this study, the growth and welfare of the African catfish (Clarias gariepinus, Burchell 1822) were investigated under industrial farming conditions. For this purpose, the growing success (cm, g) and typical stress related parameters (glucose-, lactate-, cortisol-concentrations, growth hormone, HSI-liver index) were investigated on the African catfish (102–841 g) in relation to an external stressor (working light and noise) and different feeding regimes (day, night, and day and night feeding) over 83 days. As no significant effects were found among the experimental feeding treatments in relation to the growth performance and investigated stress parameters, the time of feeding seems to have less impact to the production success and stress reactions as suggested before. Regarding our results, the effect of feeding conditioning could have played a strong factor likewise the ageing process of the reared fish species which is known to be rather photophobic. Therefore, the factor of conditioning and its influence to the time shift in feeding regimes and the impact of noise and light stressors during feeding should be investigated separately in future experiments to obtain further results in this context and clarify the validity of the best feeding conditions for African catfish. Full article
(This article belongs to the Special Issue Physiological Response Mechanisms of Aquatic Animals to Stress)
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14 pages, 1146 KB  
Article
Correlations Between Morphometric Traits and Body Mass Among Different Geographical Populations of Wild Macrobrachium nipponense in Upper Reaches of the Huaihe River, China
by Jiahui Liu, Zhiguo Hu, Chaoqun Su, Tiezhu Yang, Chunxiang Li, Hongxin Cheng, Yuan Tian and Xusheng Guo
Fishes 2025, 10(8), 413; https://doi.org/10.3390/fishes10080413 - 18 Aug 2025
Viewed by 209
Abstract
The oriental river prawn (Macrobrachium nipponense) is one of the most popular freshwater prawn in China. In order to study the relationships between morphometric traits and body mass across different geographical locations and provide references of phenotypic traits for the breeding [...] Read more.
The oriental river prawn (Macrobrachium nipponense) is one of the most popular freshwater prawn in China. In order to study the relationships between morphometric traits and body mass across different geographical locations and provide references of phenotypic traits for the breeding of M. nipponense, we collected wild M. nipponense from three locations (main stream, HH; Suyahu Reservoir, SYH; and Wuyue Reservoir, WY) in the upper reaches of the Huaihe River, China, and measured 26 morphometric traits and body masses. We found that the coefficient of variation of body mass varied from 31.88% to 59.27% across the three populations, exceeding that of morphometric traits within each population. All 26 morphometric traits, except for the fourth abdominals somite length in the WY population, were observed to correlate significantly positively with body mass (p < 0.05). A path analysis indicated that propodus length, body length, ischium length, carapace height, and second abdominals somite length in the HH population; body length, propodus length, abdominal height, sixth abdominals somite length, and telson length in the SYH population; and body length, carapace height, fifth abdominals somite length, and abdominal height in the WY population significantly affected body mass directly (p < 0.05). Comparing the pathway analysis with the grey relation analysis, we can conclude that the trait most correlated with body mass was body length across the three geographical populations. These findings provide references of waiting morphological traits for M. nipponense selective breeding in different geographical populations. Full article
(This article belongs to the Section Biology and Ecology)
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15 pages, 1927 KB  
Article
Histological and Transcriptomic Profiling Reveals Metabolic and Immune Responses to Ammonia Stress in Scatophagus argus
by Haixin Xu, Zitao Zhang, Honggeng Zhu, Qisheng Xu, Shihu Li and Jianhua Chen
Fishes 2025, 10(8), 412; https://doi.org/10.3390/fishes10080412 - 15 Aug 2025
Viewed by 313
Abstract
Ammonia is widely regarded as the primary chemical pollutant responsible for fish toxicity in aquaculture. Scatophagus argus is an economically important euryhaline species extensively cultured in marine aquaculture. To investigate its physiological responses and molecular mechanisms under ammonia exposure, we determined the 96 [...] Read more.
Ammonia is widely regarded as the primary chemical pollutant responsible for fish toxicity in aquaculture. Scatophagus argus is an economically important euryhaline species extensively cultured in marine aquaculture. To investigate its physiological responses and molecular mechanisms under ammonia exposure, we determined the 96 h median lethal concentration (LC50-96 h) of total ammonia nitrogen (TAN) for S. argus juveniles. Histopathological analyses were conducted at TAN concentrations of 0 (control), 30, and 60 mg/L, with transcriptomic analysis performed at 0 and 60 mg/L. The results showed that the LC50-96 h for S. argus was 59.43 mg/L. Histological analysis revealed lamellar epithelial detachment and hepatocyte vacuolization in S. argus exposed to 60 mg/L TAN, indicating substantial structural impairment under ammonia stress. Transcriptomic profiling identified 245 differentially expressed genes (DEGs), comprising 142 upregulated and 103 downregulated genes. KEGG enrichment analysis indicated that DEGs were primarily enriched in energy metabolism and immune-related pathways. Key genes involved in glucose metabolism, amino acid metabolism, and cellular regulation (e.g., PFKM, PGM1, MAT2A, DDIT4) were significantly upregulated in energy metabolism pathways. In immune-related pathways, immune regulatory genes such as GIMAP4 and ARRDC3 were upregulated, while NAMLAA, associated with inflammatory modulation, was downregulated. Collectively, these transcriptional changes suggest that S. argus responds to external ammonia stress through coordinated regulation of energy metabolism and immune function. This study provides novel insights into the physiological and molecular strategies employed by S. argus in response to ammonia toxicity, offering a reference for environmental risk assessment and aquaculture management. Full article
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17 pages, 1594 KB  
Article
Isolation, Identification, and Virulence Properties of Enterobacter bugandensis Pathogen from Big-Belly Seahorse Hippocampus abdominalis
by Haibin Ye, Chenhao Teng, Yueqi Yang, Yiyao Liu, Li Li, Ying Fan, Youhong Wang, Jing Diao, Lingling Yu, Chunlei Gai and Haipeng Cao
Fishes 2025, 10(8), 411; https://doi.org/10.3390/fishes10080411 - 14 Aug 2025
Viewed by 297
Abstract
Nowadays, members of the genus Enterobacter have been documented as human and aquaculture pathogens. To date, no reports have described Enterobacter bugandensis infecting Hippocampus abdominalis. In the present study, an isolate of E. bugandensis, designated H4, was identified as a causative pathogen [...] Read more.
Nowadays, members of the genus Enterobacter have been documented as human and aquaculture pathogens. To date, no reports have described Enterobacter bugandensis infecting Hippocampus abdominalis. In the present study, an isolate of E. bugandensis, designated H4, was identified as a causative pathogen in cultured H. abdominalis following Koch’s postulate, and its virulence properties were further described. The isolate’s genome consisted of a single circular chromosome and harbored several virulence and resistance genes, including, but not limited to, csgG, acrB, hcp, gndA, galF, rpoS, fur, rcsB, and phoP involved in adherence, antimicrobial activity, effector delivery systems, immune modulation, and regulation, as well as baeR, blaACT-49, ramA, hns, ftsI, acrA, gyrA, fabI, crp, oqxB, parE, gyrB, phoP, rpoB, tuf, ptsI, and fosA2 functioning against aminoglycoside, cephamycin, disinfecting agent and antiseptic, fluoroquinolone, macrolide, peptide, and other antimicrobials. Additionally, the isolate exhibited multiple resistance to cephalosporins, penicillins, and tetracyclines and demonstrated a median lethal dose (LD50) of 4.47 × 105 CFU/mL in H. abdominalis. To our knowledge, this is the first study to describe E. bugandensis infecting H. abdominalis. These findings highlight the zoonotic potential of E. bugandensis and underscore the need for targeted health management in seahorse farming. Full article
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19 pages, 1866 KB  
Article
Depletion of Albendazole and Its Metabolites and Their Impact on the Gut Microbial Community Following Multiple Oral Dosing in Yellow River Carp (Cyprinus carpio haematopterus)
by Yue Liu, Yan Dai, Yan-Ni Zhang, Wen-Rui Wang, Yu-Xin Chen, Yang-Guang Jin, Long-Ji Sun, Shi-Hao Li, Fang Yang, Xing-Ping Li and Fan Yang
Fishes 2025, 10(8), 410; https://doi.org/10.3390/fishes10080410 - 14 Aug 2025
Viewed by 165
Abstract
Healthy Yellow River carp (Cyprinus carpio haematopterus) reared at a water temperature of 23 ± 0.6 °C were orally administered albendazole (ABZ) at a dose of 12 mg/kg body weight (BW) once daily for seven consecutive days. At predetermined time points [...] Read more.
Healthy Yellow River carp (Cyprinus carpio haematopterus) reared at a water temperature of 23 ± 0.6 °C were orally administered albendazole (ABZ) at a dose of 12 mg/kg body weight (BW) once daily for seven consecutive days. At predetermined time points after the final administration, five fish were randomly selected for sampling. Plasma, skin-on-muscle, liver, and kidney tissues were collected, and the concentrations of ABZ and its three metabolites—albendazole sulfoxide (ABZSO), albendazole sulfone (ABZSO2), and albendazole-2-aminosulfone (ABZ-2-NH2−SO2)—were determined using high-performance liquid chromatography (HPLC). The results indicated that ABZ and ABZSO were widely distributed across tissues, while ABZSO2 and ABZ-2-NH2-SO2 were only present at trace levels. Pharmacokinetic analysis of ABZ and ABZSO in plasma and tissues was performed using noncompartmental analysis (NCA). ABZ peaked in plasma at 0.73 μg/mL at 24 h after the last administration, with an elimination half-life (t1/2λZ) of 38.56 h. ABZSO reached a peak plasma concentration of 1.54 μg/mL at 24 h, with a t1/2λZ of 53.73 h. According to China’s national standard, where ABZ-2-NH2−SO2 is the marker residue with a maximum residue limit (MRL) of 100 μg/kg in fish skin-on muscle, no withdrawal period was necessary. However, based on the European Union standard—which uses the sum of ABZ and its three metabolites as the marker residue and an MRL of 100 μg/kg in ruminants—a withdrawal period of 16 days (or 351 °C-days) was required. Additionally, the study assessed changes in the intestinal microbiota following multiple oral doses of ABZ. The results indicated that ABZ administration significantly altered microbial diversity and composition in a dose- and time-dependent manner. After drug withdrawal, the intestinal microbiota gradually returned to baseline levels, similar to the untreated control group. Full article
(This article belongs to the Special Issue Aquaculture Pharmacology)
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13 pages, 2815 KB  
Article
Diel Catch Variation of the Primary Fish Species Captured by Trammel Nets in a Shallow Eutrophic Lake in Jiangsu Province, China
by Jiyang Dong, Xiumiao Song, Yong Zhu, Qigen Liu and Zhongjun Hu
Fishes 2025, 10(8), 409; https://doi.org/10.3390/fishes10080409 - 14 Aug 2025
Viewed by 292
Abstract
Fish diel activity can affect the catch of fishing gear, such as gill nets, thereby influencing fishery resource assessment and management. This study investigated diel catch variations of primary fish species in Gehu Lake using monofilament trammel nets from April to November of [...] Read more.
Fish diel activity can affect the catch of fishing gear, such as gill nets, thereby influencing fishery resource assessment and management. This study investigated diel catch variations of primary fish species in Gehu Lake using monofilament trammel nets from April to November of 2016. Fish sampling occurred monthly, with nets set and fish caught at four-hour intervals in each month. The results showed that significant diel effects and diel × month interaction were found on Chinese silver carp (SC) and diel × month interaction on common carp (CC). Topmouth, humpback, and Wuchang bream (WB) displayed significantly higher catch per unit effort (CPUE) during twilight or daytime than at night, and no diel × month interactions were detected. For Chinese bighead carp (BC), Mongolian redfin (MR), Japanese grenadier anchovy (JGA), and crucian carp, no diel effect and diel × month interaction were observed. The study suggested that most activities occurring in daytime and at twilight were caused by visual orientation to prey for topmouth and humpback, and by the herbivorous feeding habitat of WB. Food competition between BC and JGA may drive a pronounced temporal partitioning of their diel activity. Overnight gillnet fishing could underestimate the population sizes of herbivores, such as WB, and visually oriented predators, for example, humpback, and might not influence the estimation for BC, JGA, and crucian carp. However, its effects on the stock estimation of SC and CC would vary with months. Notably, future winter investigations into diel catch in this lake could potentially augment the conclusions of the present study. Full article
(This article belongs to the Special Issue Biodiversity and Spatial Distribution of Fishes, Second Edition)
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15 pages, 2124 KB  
Article
Rutin Inhibits Histamine-Induced Cytotoxicity of Zebrafish Liver Cells via Enhancing Antioxidant and Anti-Inflammatory Properties
by Ke Cheng, Apeng Liu, Di Peng, Lixue Dong, Yangyang Liu, Juan Tian, Hua Wen, Yongju Luo, Zhongbao Guo and Ming Jiang
Fishes 2025, 10(8), 408; https://doi.org/10.3390/fishes10080408 - 14 Aug 2025
Viewed by 188
Abstract
Histamine can damage the antioxidant and immune systems in fish and crustaceans. Rutin, a natural substance with a diverse phenolic structure, has demonstrated antioxidant and anti-inflammatory properties. However, whether rutin can mitigate histamine-induced negative effects remains uninvestigated in fish models. This study investigated [...] Read more.
Histamine can damage the antioxidant and immune systems in fish and crustaceans. Rutin, a natural substance with a diverse phenolic structure, has demonstrated antioxidant and anti-inflammatory properties. However, whether rutin can mitigate histamine-induced negative effects remains uninvestigated in fish models. This study investigated the effect of 0.1–100 μM rutin preincubation on histamine (29.5 mM)-induced cytotoxicity in zebrafish liver cells (ZFL) and its potential mechanisms. Results showed that 0.1–100 μM rutin significantly improved ZFL cell survival following histamine stimulation and protected cellular morphology. Rutin inhibited the adverse effects of histamine on ZFL by scavenging or suppressing the accumulation of reactive oxygen species (ROS), H2O2, and malondialdehyde (MDA), while increasing the activities of superoxide dismutase (SOD), catalase (CAT), and total antioxidant capacity (T-AOC). At the protein level, 10 μM rutin significantly promoted Nrf2 protein expression. HO-1 protein was significantly up-regulated after preincubation with 0.1–10 μM rutin, whereas IL-1β protein levels were significantly down-regulated. The mechanism may involve activation of the Nrf2 antioxidant signaling pathway and inhibition of the NF-κB inflammatory signaling pathway. In summary, within the experimental concentration range, 10 μM rutin showed the strongest inhibitory effects on histamine-induced ZFL cell death and oxidative stress. This study provides a theoretical basis and data support for evaluating rutin’s feasibility as a green aquatic feed additive. Full article
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16 pages, 4236 KB  
Article
Toxic Effects of Tetramethyl Bisphenol A on Embryonic–Larval Development of Zebrafish (Danio rerio)
by Ermei Yin, Manwen Zeng, Haipeng Yan, Jiahao Gao, Zuchun Chen, Ning Zhang, Yusong Guo, Zhongduo Wang and Zhongdian Dong
Fishes 2025, 10(8), 407; https://doi.org/10.3390/fishes10080407 - 14 Aug 2025
Viewed by 265
Abstract
Tetramethyl bisphenol A (TMBPA), a novel alternative to Bisphenol A, is widely used as an industrial flame retardant and a raw material for tetramethyl polycarbonate plastics. With the increasing use of TMBPA, its aquatic ecological risks remain unclear. Therefore, this study investigated the [...] Read more.
Tetramethyl bisphenol A (TMBPA), a novel alternative to Bisphenol A, is widely used as an industrial flame retardant and a raw material for tetramethyl polycarbonate plastics. With the increasing use of TMBPA, its aquatic ecological risks remain unclear. Therefore, this study investigated the developmental toxicity of TMBPA using zebrafish (Danio rerio) as a model, exposing embryos to 0.5, 5, 50, and 200 μg/L TMBPA for 120 h. The results showed that treatment with 5, 50, and 200 μg/L TMBPA decreased the hatching rate of zebrafish embryos at 48 h post-fertilization (hpf), while no significant difference was observed at 72 hpf. Meanwhile, TMBPA exposure at all concentrations showed no significant effect on the survival rate. Furthermore, a high concentration of TMBPA (200 μg/L) significantly reduced the total length and suppressed swimming ability in zebrafish larvae. In addition, gene expression analysis revealed impacts on antioxidant system (cat, gpx, mn-sod, keap1, ucp2, nrf2), hypothalamic–pituitary–thyroid (HPT) axis (ttr, ugt1ab, trβ), cardiac developmental (tbx2b, myl7, bmp4, notch1b, amhc), and the hypothalamic–pituitary–adrenal (HPA) axis (pomca and nr3c1). The results indicated that TMBPA exposure adversely disrupted embryo hatching and larval development of zebrafish, accompanied by altering the expression of functional genes in larvae. These results provide further evidence for the potential environmental hazard posed by TMBPA. Full article
(This article belongs to the Section Environment and Climate Change)
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19 pages, 1619 KB  
Article
Impact of Water Velocity on Litopenaeus vannamei Behavior Using ByteTrack-Based Multi-Object Tracking
by Jiahao Zhang, Lei Wang, Zhengguo Cui, Hao Li, Jianlei Chen, Yong Xu, Haixiang Zhao, Zhenming Huang, Keming Qu and Hongwu Cui
Fishes 2025, 10(8), 406; https://doi.org/10.3390/fishes10080406 - 14 Aug 2025
Viewed by 303
Abstract
In factory-controlled recirculating aquaculture systems, precise regulation of water velocity is crucial for optimizing shrimp feeding behavior and improving aquaculture efficiency. However, quantitative analysis of the impact of water velocity on shrimp behavior remains challenging. This study developed an innovative multi-objective behavioral analysis [...] Read more.
In factory-controlled recirculating aquaculture systems, precise regulation of water velocity is crucial for optimizing shrimp feeding behavior and improving aquaculture efficiency. However, quantitative analysis of the impact of water velocity on shrimp behavior remains challenging. This study developed an innovative multi-objective behavioral analysis framework integrating detection, tracking, and behavioral interpretation. Specifically, the YOLOv8 model was employed for precise shrimp detection, ByteTrack with a dual-threshold matching strategy ensured continuous individual trajectory tracking in complex water environments, and Kalman filtering corrected coordinate offsets caused by water refraction. Under typical recirculating aquaculture system conditions, three water circulation rates (2.0, 5.0, and 10.0 cycles/day) were established to simulate varying flow velocities. High-frequency imaging (30 fps) was used to simultaneously record and analyze the movement trajectories of Litopenaeus vannamei during feeding and non-feeding periods, from which two-dimensional behavioral parameters—velocity and turning angle—were extracted. Key experimental results indicated that water circulation rates significantly affected shrimp movement velocity but had no significant effect on turning angle. Importantly, under only the moderate circulation rate (5.0 cycles/day), the average movement velocity during feeding was significantly lower than during non-feeding periods (p < 0.05). This finding reveals that moderate water velocity constitutes a critical hydrodynamic window for eliciting specific feeding behavior in shrimp. These results provide core parameters for an intelligent Litopenaeus vannamei feeding intensity assessment model based on spatiotemporal graph convolutional networks and offer theoretically valuable and practically applicable guidance for optimizing hydrodynamics and formulating precision feeding strategies in recirculating aquaculture systems. Full article
(This article belongs to the Special Issue Application of Artificial Intelligence in Aquaculture)
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19 pages, 3707 KB  
Article
The Effect of a Polypeptide Based Vaccine on Fish Welfare and Infestation of Salmon Lice, Lepeophtheirus salmonis, in Sea Cages with Atlantic Salmon (Salmo salar L.)
by Ragnar Nortvedt, Erik Dahl-Paulsen, Laura Patricia Apablaza Bizama, Amritha Johny and Erik Slinde
Fishes 2025, 10(8), 405; https://doi.org/10.3390/fishes10080405 - 13 Aug 2025
Viewed by 306
Abstract
A new polypeptide vaccine towards salmon lice (Lepeophtheirus salmonis) was given to experimental groups of 2 × 8000 Atlantic salmon parr (Salmo salar L.), following the vaccination of a total of 4 × 8000 parr with a common set of [...] Read more.
A new polypeptide vaccine towards salmon lice (Lepeophtheirus salmonis) was given to experimental groups of 2 × 8000 Atlantic salmon parr (Salmo salar L.), following the vaccination of a total of 4 × 8000 parr with a common set of vaccines used in Norwegian aquaculture to prevent infestation in salmon growing at sea. The remaining 2 × 8000 salmon served as control. The trial was conducted at a sea farm research facility at Knappen-Solheim in Masfjorden, Norway. Natural infestation with sea lice were staged and counted once a week from January–December 2023. The infestation was never above two mature female lice per salmon, the maximum limit set specifically for the present trial by the Norwegian Food Safety Authorities, thus delousing with chemicals or other methods was avoided. Mortality, growth, feed consumption, sexual maturation, slaughter quality, and welfare quality parameters were not significantly different between vaccinated and control salmon. The effect size showed a moderate positive difference of 0.07 mature female salmon lice per salmon in favor of the vaccinated groups from a fish size above 600 g in May until November. All fish were slaughtered and marketed at a size of 5.8 kg (>83% superior quality). Full article
(This article belongs to the Special Issue Healthy Aquaculture and Disease Control)
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17 pages, 2243 KB  
Article
Long-Term Changes in Fish Landings and Fish Community Structure in Nile Delta Lakes: Implications for Fisheries Sustainability
by Mohamed Samy-Kamal and Ahmed A. Abdelhady
Fishes 2025, 10(8), 404; https://doi.org/10.3390/fishes10080404 - 13 Aug 2025
Viewed by 339
Abstract
This study examined long-term trends (1991–2019) in landings and fish community structure in the four Egyptian Nile Delta lakes. Using fisheries data, we explored trends in the catch per unit effort (CPUE) and temporal dynamics of landings and fishing effort. Non-metric Multidimensional Scaling [...] Read more.
This study examined long-term trends (1991–2019) in landings and fish community structure in the four Egyptian Nile Delta lakes. Using fisheries data, we explored trends in the catch per unit effort (CPUE) and temporal dynamics of landings and fishing effort. Non-metric Multidimensional Scaling (nMDS) and Similarity Percentage Analysis (SIMPER) were employed to assess long-term changes in fish community structure. The results revealed variable productivity across the lakes. Lake Manzala often exhibited higher yields between 1991 and 2004, and notably in 2013 (e.g., 62,372 tons), while Lake Burullus peaked at 81,399 tons in 2019. A reciprocal trend was often observed in their total yields. Lake Burullus catches were dominated by Tilapia and Mullets, while Edku and Mariout showed lower productivity. CPUE patterns varied, with Lake Manzala showing a notable increase, peaking at approximately 52 tons per boat per year in 2013, and Lake Burullus experienced a sharp increase to about 29 tons per boat per year in 2019. A shift towards amateur fishing was observed predominantly in Lake Manzala, alongside a decline in traditional licensing. An increase in fishers operating without boats was also noted across all the Northern Lakes, with contributions from Lake Edko and Lake Manzala. nMDS and SIMPER analyses revealed distinct temporal groupings of years within each lake, indicating significant shifts in fish community structure, likely in response to invasive species, pollution, and habitat degradation. These findings underscore the need for lake-specific management and long-term monitoring to address unsustainable fishing and ecological changes, ensuring biodiversity conservation and fisheries sustainability in the region. Full article
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12 pages, 498 KB  
Article
A Kinetic Study on the Accumulation of No.0 Fuel Oil and Pinghu Crude Oil Water-Accommodated Fraction in Exopalaemon carinicauda
by Lei Li, Yiyun Zhang, Li Wei, Aijia Lin, Jiaying Cai, Zengqiao Wei, Qingyuan Wu, Junxiang Niu, Yanming Sui and Mei Jiang
Fishes 2025, 10(8), 403; https://doi.org/10.3390/fishes10080403 - 13 Aug 2025
Viewed by 192
Abstract
The kinetic parameters of No.0 fuel oil and Pinghu crude oil water-accommodated fractions (WAFs) during accumulation and elimination in Exopalaemon carinicauda were quantified using a semi-static two-compartment kinetic model. The accumulation phase data were analyzed via nonlinear regression to obtain kinetic parameters, yielding [...] Read more.
The kinetic parameters of No.0 fuel oil and Pinghu crude oil water-accommodated fractions (WAFs) during accumulation and elimination in Exopalaemon carinicauda were quantified using a semi-static two-compartment kinetic model. The accumulation phase data were analyzed via nonlinear regression to obtain kinetic parameters, yielding critical values including the uptake rate constant (k1), elimination rate constant (k2), bioconcentration factor (BCF), equilibrium body burden (CAmax), and biological half-life (B1/2). Modeling results demonstrated distinct kinetic parameters for the two oils. For No.0 fuel oil, the average values were k1 = 5.21; k2 = 0.1105; BCF = 48.98; CAmax = 2.95 mg/kg; and B1/2 = 6.40 days. For Pinghu crude oil, the averages were k1 = 10.25; k2 = 0.1044; BCF = 98.15; CAmax = 8.48 mg/kg; and B1/2 = 6.64 days. The uptake rate constant (k1) and BCF generally decreased with increasing petroleum hydrocarbon exposure concentrations in ambient seawater, while the elimination rate constant (k2) remained relatively constant across different concentrations. CAmax increased proportionally with the petroleum hydrocarbon exposure concentration. Goodness-of-fit tests confirmed that the petroleum hydrocarbon concentrations in the experimental data were well described by the semi-static two-compartment model. Throughout the testing period, the concentration of No.0 fuel oil in Exopalaemon carinicauda remained lower than that of Pinghu crude oil. Full article
(This article belongs to the Section Environment and Climate Change)
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16 pages, 1640 KB  
Article
Ontogenetic and Sex-Specific Isotopic Niches of Blue Sharks (Prionace glauca) in the Northwestern Pacific
by Pengpeng Ding, Satoshi Katayama, Hiroaki Murakami and Tah Andrew Ryan
Fishes 2025, 10(8), 402; https://doi.org/10.3390/fishes10080402 - 12 Aug 2025
Viewed by 394
Abstract
The blue shark (Prionace glauca) is a pelagic species widely distributed in the northwestern Pacific Ocean. The trophic roles of blue sharks across different developmental stages and between sexes remain poorly understood. Fifty-four sharks were sampled (October 2022–March 2024) for precaudal [...] Read more.
The blue shark (Prionace glauca) is a pelagic species widely distributed in the northwestern Pacific Ocean. The trophic roles of blue sharks across different developmental stages and between sexes remain poorly understood. Fifty-four sharks were sampled (October 2022–March 2024) for precaudal length (PCL) and stable isotope levels (δ13C, δ15N) in the muscle tissue (n = 52). Mean PCL varied based on the month of sampling (p = 0.034), with the smallest individuals occurring in July (143.0 ± 4.3 cm) and the largest in October (178.0 ± 2.6 cm). Stable isotope analysis (δ13C and δ15N) indicated consistent offshore habitat use (δ13C: from −20.70 to −18.82‰) and significant nitrogen isotopic differences among life history (δ15N: from 10.23 to 15.72‰; Kruskal–Wallis test, p = 0.037). The elevated δ15N values observed in the subadult group (relative to juvenile individuals) are likely due to trophic enrichment associated with morphological development. Females exhibited markedly larger isotopic niches (SEAc = 2.42‰2) than did males (0.57‰2), and niche overlap was greater within each sex (40–52%) than between sexes (<21%). These results revealed sex-specific ecological roles and trophic strategies throughout the life history of P. glauca. Understanding these foraging differences can help with catch reduction and habitat-protection measures in the transboundary pelagic fisheries of the northwestern Pacific. Full article
(This article belongs to the Section Biology and Ecology)
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12 pages, 1701 KB  
Article
Smaller Body Size and Warmer Water Improve Two Temperate Fishes’ Upstream Passage over Wetted Ramps
by Uli Reinhardt and Grace Scott Halcrow
Fishes 2025, 10(8), 401; https://doi.org/10.3390/fishes10080401 - 11 Aug 2025
Viewed by 313
Abstract
Most artificial fishways allow upstream passage of large-bodied, strong-swimming fish species. Wetted ramps, which are moderate in inclination and have little water flow, could allow passage of smaller-bodied fishes over low-head dams and culverts. We observed creek chubs (Semotilus atromculatus) and [...] Read more.
Most artificial fishways allow upstream passage of large-bodied, strong-swimming fish species. Wetted ramps, which are moderate in inclination and have little water flow, could allow passage of smaller-bodied fishes over low-head dams and culverts. We observed creek chubs (Semotilus atromculatus) and white suckers (Catostomus commersonii) on wetted ramps in a laboratory setting. Smaller individuals entered the ramps at lower absolute swim velocities but exhibited superior upstream passage due to positive acceleration in the thin (<1 cm) water layer on the ramps. Larger fish displayed more pronounced, probably less efficient, head and tail amplitudes during passage. We argue that the relatively smaller depth of immersion in water was responsible for hampering the larger-bodied individuals on the ramps. Warmer water temperatures (15 °C vs. 10 °C) roughly doubled the mean distance fish traveled up the ramps. Our findings can inform fishway design for small-bodied fishes. In regions with low-head barriers against invasive sea lamprey (Petromyzon marinus), wetted ramps may help connect habitats for native fish species. Full article
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16 pages, 3173 KB  
Article
A Quantitative Approach to Prior Setting for Relative Biomass (B/k) in CMSY++: Application to Snow Crabs (Chionoecetes opilio) in Korean Waters
by Ji-Hyun Eom, Sung-Il Lee and Sang-Chul Yoon
Fishes 2025, 10(8), 400; https://doi.org/10.3390/fishes10080400 - 11 Aug 2025
Viewed by 300
Abstract
Snow crabs (Chionoecetes opilio), a commercially valuable species in Korean waters, have been managed under the Total Allowable Catch (TAC) system since 2002. However, stock assessment has been limited due to difficulties in estimating key ecological traits such as growth, maturity, [...] Read more.
Snow crabs (Chionoecetes opilio), a commercially valuable species in Korean waters, have been managed under the Total Allowable Catch (TAC) system since 2002. However, stock assessment has been limited due to difficulties in estimating key ecological traits such as growth, maturity, and mortality. In this study, the Bayesian Schaefer Model (BSM), implemented within CMSY++ framework, was applied to assess the stock status of snow crabs in Korean waters. BSM requires catch and abundance index data, such as catch per unit effort (CPUE) or biomass, as well as prior information on species resilience and relative biomass (B/k). To improve the reliability of B/k priors, we developed a method to calculate them quantitatively using fishery data, sales amounts, and biological information, unlike the qualitative assumptions on stock and fishing conditions proposed in previous research. Two standardized CPUE indices with differing temporal trends in recent years were used as abundance indices. To address the structural uncertainty associated with these divergent trends, we applied a grid-based approach by treating each CPUE index as an independent model scenario and integrating the posterior distributions. A total of 12,000 posterior estimates (6000 per index) were generated through the BSM and used to construct a Kobe plot. Results indicate that the current biomass is slightly above the level supporting maximum sustainable yield, and fishing mortality slightly below the optimal level, suggesting that the stock is healthy and sustainably exploited. Future research should aim to establish a systematic framework for developing quantitative B/k priors to enhance stock assessment accuracy. Full article
(This article belongs to the Special Issue Modeling Approach for Fish Stock Assessment)
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15 pages, 1768 KB  
Article
Analysis of Morphological Characteristics of Male and Female Gymnocypris eckloni Herzenstein
by Qiming Wang, Suxing Fu, Xiaoyi Chen, Yuting Duan, Luo Lei, Yawen Fan and Chaowei Zhou
Fishes 2025, 10(8), 399; https://doi.org/10.3390/fishes10080399 - 8 Aug 2025
Viewed by 220
Abstract
Accurate sex identification is crucial for the artificial breeding of fish species, and identification based on phenotypic traits is the preferred method owing to its low cost and rapidity. This study aimed to investigate morphological differences between male and female Gymnocypris eckloni Herzenstein. [...] Read more.
Accurate sex identification is crucial for the artificial breeding of fish species, and identification based on phenotypic traits is the preferred method owing to its low cost and rapidity. This study aimed to investigate morphological differences between male and female Gymnocypris eckloni Herzenstein. A total of 166 G. eckloni individuals (83 males and 83 females) were included, and 20 morphological indicators, including head length, snout length, and body weight, were measured. Various analytical methods, such as correlation analysis, principal component analysis, discriminant analysis, and systematic cluster analysis, were used to compare the morphological characteristics of male and female G. eckloni. The result showed significant differences in morphological characteristics between male and female individuals (p ≤ 0.05). Principal component analysis revealed five main components that collectively contributed to 83.64% of the variance, primarily including body length, fork length, total length, and body weight, highlighting the significance of these components in sex differentiation. Subsequently, a mathematical model was constructed via discriminant analysis. This model demonstrated an accuracy of 79.5% and 73.5% in identifying male and female G. eckloni, respectively, with an overall accuracy of 76.50%. Furthermore, on analyzing the relationship between body length and body weight in G. eckloni, we found differences in growth patterns between sexes. In particular, female fish usually weighed more than male fish, which was consistent with the biological characteristics and energy distribution patterns of G. eckloni. These results suggest that sexual dimorphism in G. eckloni is primarily concentrated in body shape and head morphology, which provides a reliable basis for sex identification based on morphological differences. Full article
(This article belongs to the Section Sustainable Aquaculture)
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17 pages, 1795 KB  
Article
Facilitation and Interference Between Native Fishes Influence Invasion Resistance
by Jeffrey E. Hill and Theresa P. Floyd
Fishes 2025, 10(8), 398; https://doi.org/10.3390/fishes10080398 - 8 Aug 2025
Viewed by 244
Abstract
Understanding the dynamics of species invasions in aquatic ecosystems is crucial for conservation and management efforts. We investigated the influence of species interactions and habitat complexity on biotic resistance to invasion by small-bodied freshwater fishes in peninsular Florida. Specifically, we focused on the [...] Read more.
Understanding the dynamics of species invasions in aquatic ecosystems is crucial for conservation and management efforts. We investigated the influence of species interactions and habitat complexity on biotic resistance to invasion by small-bodied freshwater fishes in peninsular Florida. Specifically, we focused on the interactions between two native species, Florida bass (Micropterus salmoides) and eastern mosquitofish (Gambusia holbrooki), and a common invader, the green swordtail (Xiphophorus hellerii). Our experiments included tanks with varying levels of structural complexity to mimic different habitat types. The presence of both native species significantly reduced swordtail survival, but the effect varied depending on habitat complexity. In habitats with strong predation refuge, mosquitofish facilitated bass predation on swordtails, whereas in habitats with weak predation refuge, bass suppressed mosquitofish aggression, leading to interference. Mosquitofish predominantly occupied vegetated areas and aggressively interacted with swordtails, significantly reducing invader survival. Our findings highlight the importance of considering species interactions and habitat complexity in predicting biotic resistance to invasions. We conclude that diverse interactions among native species can either enhance or impede invasion resistance, with implications for conservation and management strategies. Further research is needed to understand the broader impacts of multiple predators and competitors on invader dynamics in aquatic ecosystems. Full article
(This article belongs to the Section Biology and Ecology)
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16 pages, 6802 KB  
Article
Morphomolecular Characterization of Rhadinorhynchus niloticus (Acanthocephala: Rhadinorhynchidae) from Nile Perch (Lates niloticus, Perciformes: Latidae)
by Ebtsam Sayed Hassan Abdallah, Marco Albano and Hasnaa Thabit
Fishes 2025, 10(8), 397; https://doi.org/10.3390/fishes10080397 - 8 Aug 2025
Viewed by 287
Abstract
Adults of Rhadinorhynchus niloticus, a member of the Rhadinorhynchidae family, were isolated from the intestines of wild Nile perch (Lates niloticus (Linnaeus, 1758); Perciformes: Latidae) caught from the River Nile and its tributaries in Assiut City, Egypt. The parasite was found [...] Read more.
Adults of Rhadinorhynchus niloticus, a member of the Rhadinorhynchidae family, were isolated from the intestines of wild Nile perch (Lates niloticus (Linnaeus, 1758); Perciformes: Latidae) caught from the River Nile and its tributaries in Assiut City, Egypt. The parasite was found freely in the intestinal lumen with a prevalence of 10.71%, and the burden varied from one to five parasites per fish. The mean intensity and abundance were 2.16 ± 0.47 (95% CI: 1.33 to 3.17) and 0.23 ± 0.08 (95% CI: 0.11 to 0.43), respectively. The parasite was described using light and scanning electron microscopy. Molecular species identification as well as phylogenetic relationship analysis of the isolated parasite were achieved by sequencing and comparisons of the mitochondrial cytochrome oxidase C subunit I (COI) and nuclear 18S rRNA genes. The sequences were deposited in GenBank under the accession numbers PP859185 and MZ727194. Furthermore, phylogenetic analysis demonstrated that the parasites emerged from a separate branch belonging to the Rhadinorhynchidae family, which was clearly distinguished from other genospecies. Full article
(This article belongs to the Special Issue Advances in Fish Pathology and Parasitology)
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19 pages, 30477 KB  
Article
Impact of Novel Diets on the Distribution of Mucosal Immune Cells in the Digestive System of High-Growth Genetically Selected Gilthead Seabream (Sparus aurata) in a Long-Term Feeding Trial
by Sirine Abdeljaouad, Paula Sarmiento, Rafael Ginés, Gabriela Duque and Pedro L. Castro
Fishes 2025, 10(8), 396; https://doi.org/10.3390/fishes10080396 - 8 Aug 2025
Viewed by 350
Abstract
An alternative fish feed (ALT) replacing 50% of the fishmeal with poultry byproduct meal and insect meal and total fish oil with microalgae, poultry, and salmon byproducts oils was tested for 300 days on 900 gilthead seabream (Sparus aurata) with an [...] Read more.
An alternative fish feed (ALT) replacing 50% of the fishmeal with poultry byproduct meal and insect meal and total fish oil with microalgae, poultry, and salmon byproducts oils was tested for 300 days on 900 gilthead seabream (Sparus aurata) with an initial body weight of 17.1 ± 1.8 g (mean ± SD) of unselected (REF) and selected (HG) genotypes. Using in situ, histochemistry, and immunohistochemistry techniques, we assessed the immune response by characterizing IgT and IgM immunoglobulins, CD3ε+ T lymphocytes, and eosinophilic granular cells (EGCs) along the digestive system. IgT mRNA+ cells were concentrated in the second part of the digestive tract, while IgM+ predominated in the first and occasionally showed intraepithelial localization. CD3ε+ and EGCs were most prominent in the midgut. The diet affected IgT and IgM mRNA+ cells mainly in the initial part of the digestive tract. For CD3ε+, the diet only affected the initial and final parts, while the ALT diet increased EGC abundance across the middle compartments. Genetic selection had minimal effect on IgT+ and CD3ε+ cells, affecting only the first compartments. The REF group showed higher IgM+ cell abundance in specific regions, while EGCs differed between genotypes, favoring anterior accumulation in HG and ileocecal abundance in the REF group. Full article
(This article belongs to the Section Nutrition and Feeding)
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12 pages, 1451 KB  
Article
First Morphological and Molecular Identification of Intestinal Helminths in Wild Turbot Scophthalmus maximus (Linnaeus, 1758) Along the Bulgarian Black Sea Coast
by Alexander Atanasoff, Cigdem Urku, Elitsa Petrova-Pavlova and Feriha Tserkova
Fishes 2025, 10(8), 395; https://doi.org/10.3390/fishes10080395 - 7 Aug 2025
Viewed by 341
Abstract
Turbot Scophthalmus maximus (Linnaeus, 1758) is one of the most valuable and economically important species for the Black Sea countries. In Bulgaria, their numbers are limited and stocks are depleted; therefore, monitoring development and health status is extremely important. Internal helminths are widespread [...] Read more.
Turbot Scophthalmus maximus (Linnaeus, 1758) is one of the most valuable and economically important species for the Black Sea countries. In Bulgaria, their numbers are limited and stocks are depleted; therefore, monitoring development and health status is extremely important. Internal helminths are widespread among turbots on the Bulgarian Black Sea coast. However, description of this infection is relatively limited, and they have not been reported in scientific papers. For this purpose, a total of 36 hauls were made at depths from 15 to 90 m, and 65 turbots were examined for intestinal parasites. The present study represents the first report of internal helminths in turbot from Bulgarian marine waters through the spawning season, characterized morphologically based on a microscope observation and molecular identification. Evaluation of laboratory analyses revealed that two different parasites were determined: Bothriocephalus sp. (Müller, 1776) and Hysterothylacium aduncum (Rudolphi, 1802) and that 73.85% of the turbot were infected with one or more parasites. Based on the results, control measures and treatment for the wild population are unrealistic but should be considered for the containment and spread of diseases in aquaculture facilities. Full article
(This article belongs to the Special Issue Advances in Fish Pathology and Parasitology)
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15 pages, 662 KB  
Article
Genetic Structuring and Connectivity of European Squid Populations in the Mediterranean Sea Based on Mitochondrial COI Data
by Vasiliki Pertesi, Joanne Sarantopoulou, Athanasios Exadactylos, Dimitrios Vafidis and Georgios A. Gkafas
Fishes 2025, 10(8), 394; https://doi.org/10.3390/fishes10080394 - 7 Aug 2025
Viewed by 1219
Abstract
Understanding population connectivity and genetic structure is crucial for the effective management of exploited marine species. This study investigates the population genetics of the common European squid (Loligo vulgaris) across the Mediterranean Sea, focusing on samples from the Aegean Sea and [...] Read more.
Understanding population connectivity and genetic structure is crucial for the effective management of exploited marine species. This study investigates the population genetics of the common European squid (Loligo vulgaris) across the Mediterranean Sea, focusing on samples from the Aegean Sea and comparative sequences from Western Mediterranean, Eastern Mediterranean, and Atlantic coasts. A total of 67 COI mitochondrial sequences were analyzed, identifying 12 haplotypes and 27 polymorphic sites. Population-level genetic diversity, pairwise FST values, and haplotype network analyses revealed pronounced genetic differentiation in the eastern Mediterranean contrasting with the genetic homogeneity observed among Western populations. The low haplotype diversity observed in the Greek populations of L. vulgaris may be influenced by a combination of ecological and historical factors, as the Aegean region is recognized as a hotspot of endemism and historical population fragmentation. The results indicate the existence of at least two genetically differentiated clusters within the Mediterranean basin. This study advances current knowledge of the genetic structure of Loligo vulgaris by providing novel genetic data on populations from the eastern Mediterranean, offering valuable insights for future conservation and management strategies for the species. Full article
(This article belongs to the Section Genetics and Biotechnology)
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20 pages, 3615 KB  
Article
Identification of Suitable Habitats for Threatened Elasmobranch Species in the OSPAR Maritime Area
by Moritz Mercker, Miriam Müller, Thorsten Werner and Janos Hennicke
Fishes 2025, 10(8), 393; https://doi.org/10.3390/fishes10080393 - 7 Aug 2025
Viewed by 290
Abstract
Protecting threatened elasmobranch species despite limited data on their distribution and abundance is a critical challenge, particularly in the context of increasing human impacts on marine ecosystems. In the northeastern Atlantic, species such as the leafscale gulper shark, Portuguese dogfish, spurdog, and spotted [...] Read more.
Protecting threatened elasmobranch species despite limited data on their distribution and abundance is a critical challenge, particularly in the context of increasing human impacts on marine ecosystems. In the northeastern Atlantic, species such as the leafscale gulper shark, Portuguese dogfish, spurdog, and spotted ray are facing pressures from overfishing, bycatch, habitat degradation, and climate change. The OSPAR Commission has listed these species as threatened and/or declining and aims to protect them by reliably identifying suitable habitats and integrating these areas into Marine Protected Areas (MPAs). In this study, we present a spatial modelling framework using regression-based approaches to identify suitable habitats for these four species. Results show that suitable habitats of the spotted ray (25.8%) and spurdog (18.8%) are relatively well represented within existing MPAs, while those of the deep-water sharks are underrepresented (6.0% for leafscale gulper shark, and 6.8% for Portuguese dogfish). Our findings highlight the need for additional MPAs in deep-sea continental slope areas, particularly west and northwest of Scotland and Ireland. Such expansions would support OSPAR’s goal to protect 30% of its maritime area by 2030 and could benefit broader deep-sea biodiversity, including other vulnerable demersal species and benthic communities. Full article
(This article belongs to the Special Issue Habitat Assessment and Conservation of Fishes)
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21 pages, 2588 KB  
Article
Trace Metal Contamination in Commercial Fish from the Ecuadorian Amazon: Preliminary Health Risk Assessment in a Local Market
by Gabriela Elena Echevarría Díaz, Fernando Rafael Sánchez Orellana, Rafael Enrique Yunda Vega, Jonathan Santiago Valdiviezo-Rivera and Blanca Patricia Ríos-Touma
Fishes 2025, 10(8), 392; https://doi.org/10.3390/fishes10080392 - 7 Aug 2025
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Abstract
Trace metal pollution in tropical freshwater ecosystems poses growing public health concerns, particularly in regions where fisheries are central to food security; however, little is known about metal exposure risks in the Western Amazon. This study presents the first assessment of trace metal [...] Read more.
Trace metal pollution in tropical freshwater ecosystems poses growing public health concerns, particularly in regions where fisheries are central to food security; however, little is known about metal exposure risks in the Western Amazon. This study presents the first assessment of trace metal concentrations in fish sold at the main market in El Coca, a rapidly growing city in the Ecuadorian Amazon. We analyzed 11 trace metals in 17 commercially important species and estimated seven health risk indices based on two fish consumption scenarios and international reference dose standards. Our results show that all species exceeded recommended thresholds for arsenic, mercury, and lead, while one species surpassed guidelines for aluminum. Metal concentrations varied by species and river of origin: small catfish from the Payamino River had elevated cadmium, chromium, copper, and manganese levels, potentially linked to upstream gold mining, whereas larger catfish showed higher mercury and arsenic accumulation. Monte Carlo simulations of risk indices suggested overall some disease risk, but the lack of local demographic data limits accurate assessments for vulnerable groups. Despite sampling limitations, our findings offer the first baseline for monitoring trace metal exposure in the northern Ecuadorian Amazon and underscore the need for targeted public health strategies in this understudied region. Full article
(This article belongs to the Special Issue Toxicology of Anthropogenic Pollutants on Fish)
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