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Article

Discerning Xylella fastidiosa-Infected Olive Orchards in the Time Series of MODIS Terra Satellite Evapotranspiration Data by Using the Fisher–Shannon Analysis and the Multifractal Detrended Fluctuation Analysis

1
Institute of Methodologies for Environmental Analysis, National Research Council, 85050 Tito, Italy
2
Institute of Heritage Science, National Research Council, 85050 Tito, Italy
3
Department of Agriculture, University of Naples Federico II, Royal Palace of Portici, Via Università, 100, 80055 Portici, Italy
4
Agenzia Regionale per la Protezione dell’Ambiente della Basilicata, 85100 Potenza, Italy
*
Author to whom correspondence should be addressed.
Fractal Fract. 2023, 7(6), 466; https://doi.org/10.3390/fractalfract7060466
Submission received: 2 May 2023 / Revised: 5 June 2023 / Accepted: 7 June 2023 / Published: 9 June 2023
(This article belongs to the Section Life Science, Biophysics)

Abstract

:
Xylella fastidiosa is a phytobacterium able to provoke severe diseases in many species. When it infects olive trees, it induces the olive quick decline syndrome that leads the tree to a rapid desiccation and then to the death. This phytobacterium has been recently detected in olive groves in southern Italy, representing an important threat to the olive growing of the area. In this paper, in order to identify patterns revealing the presence of Xylella fastidiosa, several hundreds pixels of MODIS satellite evapostranspiration covering infected and healthy olive groves in southern Italy were analyzed by means of the Fisher–Shannon method and the multifractal detrended fluctuation analysis. The analysis of the receiver operating characteric curve indicates that the two informational quantities (the Fisher information measure and the Shannon entropy) and the three multifractal parameters (the range of generalized Hurst exponents and the width and the maximum of the multifractal spectrum) are well suited to discriminate between infected and healthy sites, although the maximum of the multifractal spectrum performs better than the others. These results could suggest the use of both the methods as an operational tool for early detection of plant diseases.

1. Introduction

The climate change is rapidly evolving in time and the world connections are more and more increasing; these two factors represent an important driver of biological invasions [1,2], which have favored the establishment of extremely dangerous phytopathogens such as Xylella fastidiosa [3]. This bacterium is transmitted by several vectors, such as the Homalodisca vitripennis, a sap-sucking leafhopper, native to southeastern United States and northeastern Mexico [4]. Xylella fastidiosa affects plants, inducing several infections, such as the Pierce’s disease of grapevines [5], the olive quick decline [6], the bacterial leaf scorch [7], and the phony peach disease [8], causing significant important economic loss in agriculture. In Europe, Xylella fastidiosa was detected for the first time in southeastern Italy in 2013 [9], and then it spread out to several other European countries, representing a real phyto-sanitary emergency [10]. The first study focused on Xylella fastidiosa was performed by Krugner et al. [11], who detected Xylella fastidiosa subsp. multiplex in olive trees affected by leaf scorch and branch dieback; however, in their laboratory experiments they did not see the same symptoms in olive trees as those found in the field. After Xylella fastidiosa was detected in olive groves in southeastern Italy, a systematic study on Xylella fastidiosa was carried out in Argentina and Brazil, where symptomatic olive trees were found to host Xylella fastidiosa subsp. pauca [12,13], which was the same subspecies found in the Italian olive trees [14]. Strona et al. [15] found that the wide distribution of olive groves in Apulia (southeastern Italy) and the large amount of Philaenus spumarius L., vector of this bacterium, could have favored the embedding of Xylella fastidiosa in this territory.
Since no treatment has yet been found to allow the infected trees to recover, and effective strategy to impede the epidemy to spread out is just plucking the infected trees, it is clear that to lower the risk of spreading the infection relies on an early identification of asymptomatic or infected trees with visible symptoms of desiccation. The visual inspection still represents the most commonly adopted approach, which is rapid, easy, and cost-effective; however, the accuracy of identification depends on the the subjective assessment of the level of the disease. Moreover, since the collected samples can only be analyzed in the laboratory, the visual inspection becomes a time-consuming, expensive, and destructive method of detection of Xylella fastidiosa [16].
Recently, remote sensing (RS) has become a useful technology aiming at monitoring the vegetation status, and also its relationship with the detection of plant diseases and infections. For instance, the use of unmanned aerial vehicle (UAVs) in combination with a multispectral radiometer to classify the severity of plant infection [17], or the airborne imaging spectroscopy combined with thermography to reveal pre-symptomatic infection patterns [18], or the use of an RS-driven support vector machine model to predict accurate plant disease spatial distribution [19], represent a few examples of application of RS employed in the detection of Xylella fastidiosa.
In this paper, we analyze the time dynamics of MODIS satellite evapotranspiration (ET) data (free available in the Google Earth Engine cloud database) of a large part of southern Italy covered by olive groves, some infected by Xylella fastidiosa. Since the infection mechanism of Xylella fastidiosa is given by the obstruction of the vessels that carry water and nutrients from the roots to the stem and up to the leaves, the infected plants dry up completely; thus, the use of ET data, which are related to the water content of the plants, seems suitable to assess the presence of plant diseases due to Xylella fastidiosa.
For our investigation purposes, we will use the Fisher–Shannon analysis [20,21] and the multifractal detrended fluctuation analysis (MFDFA) [22], which are well-known statistical methods capable of characterizing the complexity of time series in terms of informational and multiscaling behavior, such as that of ET, which would reflect the transformation processes of the trees.

2. Methods

2.1. The Periodogram Analysis and Spectral Filtering

Given a time series x n , for n = 0 , , N 1 , where N is the length of the series, its discrete Fourier transform (DFT) is defined as
Φ k + 1 = j = 0 N 1 x j + 1 e j k 2 π N i = j = 0 N 1 x j + 1 cos 2 π j k N i sin 2 π j k N = A ( k ) i B ( k ) ,
where i is the imaginary unit and
A ( k ) = j = 0 N 1 x j + 1 cos 2 π j k N
B ( k ) = n = 0 N 1 x j + 1 sin 2 π j k N .
The series x n can be obtained from its DFT by
x j + 1 = 1 N k = 0 N 1 Φ k + 1 e j k 2 π N i .
The periodogram of x n is defined as
S f k = 1 N Φ k 2 = 1 N A ( k ) 2 + B ( k ) 2 , f k = k N , k = 0 , , N 2 .
A peak in the periodogram at a frequency f h = h N indicates a periodicity in the time series with period 1 f h = N h . The removal of this periodicity from the time series (spectral filtering) is performed by removing A ( h ) and B ( h ) from Equation (4).

2.2. The Fisher–Shannon Analysis

The Fisher–Shannon analysis is based on the calculation of two informational quantities: the Fisher information measure (FIM) and Shannon entropy (SE), which locally and globally, respectively, quantify the type of smoothness of the probability distribution function of the time series, with the FIM being an indicator of the order and organization [20], and the SE an indicator of the uncertainty or disorder of the series [21]. Their definitions are as follows:
F I M = + x f ( x ) 2 d x f ( x )
S E = + f X ( x ) l o g ( f X ( x ) ) d x
where f(x) is the distribution of the series’ values x. The Shannon entropy power NX, which is always positive, is generally used instead of SE:
N X = 1 2 π e e 2 S E .
FIM and NX are linked by the isoperimetric inequality F I M · N X D [23], where D is the dimension of the space (1 for time series). The so-called Fisher–Shannon information plane (FSIP), whose coordinate axes are FIM and NX, can be used to represent time series with points that can occupy only the domain F I M · N X 1 , where the minimum F I M · N X = 1 is only for series with a Gaussian distribution. Thus, the FSIP, combining the global and local properties of SEP and FIM, respectively, could furnish a useful means of discrimination between different time dynamics of time series [23].

2.3. The Multifractal Detrended Fluctuation Analysis

The multifractal detrended fluctuation analysis (MFDFA) [22] is a well-known multifractal method, efficiently used to investigate the multifractality of time series, characterized by heterogeneity, intermittency, and different roles played by small and large fluctuations. Considering the series x ( i ) , for i = 1 , 2 , , N with mean x a v e , its profile y ( i ) is obtained by a simple integration:
y ( i ) = k = 1 i x ( k ) x a v e
The profile y ( i ) is divided into N m = N / m contiguous boxes of identical size m that are called scale. In case N is not a multiple of m, since a short part of the series could remain at the end, the same procedure is applied from the end of the profile y ( i ) . In each of the 2 N m boxes, the profile is fitted with a p-degree polynomial by a least square method, obtaining the following variance:
F 2 ( m , ν ) = 1 m i = 1 m { ( ν 1 ) m + i y ν ( i ) } 2 , ν = 1 , , N m
and
F 2 ( m , ν ) = 1 m i = 1 m { ( N ( ν N m ) m + i y ν ( i ) } 2 , ν = N m , , 2 N m
where y ν ( i ) is the p-degree polynomial fitting the profile in the box ν ; the polynomial, thus, removes all the trends until the order p in the profile, and until the order p-1 in the original time series. Then, the qth order fluctuation function F q ( m ) is calculated as
F q ( m ) = { 1 2 N m ν = 1 2 N m [ F 2 ( m , ν ) ] q 2 } 1 q
where q 0 . For q = 0 , F 0 ( m ) is calculated as follows:
e 1 4 N m ν = 1 2 N m l n [ F 2 ( m , ν ) ] m h o
from which the exponent h 0 is obtained. For q > 0 the large fluctuations are enhanced, while for q < 0 the small ones are highlighted. The fluctuation function F q ( m ) increases with the box size or scale m; but if such increase is a power law, then the series is characterized by long-range power law correlations:
F q ( m ) m h q
where h q is called generalized Hurst exponent. If the exponent h q is nearly constant with q, the series is called monofractal, indicating that the scaling behavior of the small and large fluctuations is approximately identical. If the small and large fluctuations have different scaling behaviors, h q decreases with q, indicating that more exponents are necessary to describe the fractality of the series that, in this case, is multifractal with a more complex structure. The range of the exponents h q ( h q -range) is employed to quantify the multifractality of a series. The larger the h q -range, the larger the multifractal degree of the series. The degree of multifractality can be investigated by means of the multifractal spectrum. From the following relationships (also known as the Legendre transform),
τ ( q ) = q h q 1
and
α = d τ d q
the multifractal spectrum f ( α ) is calculated as
f ( α ) = q α τ ( q )
where α is the so-called Hölder exponent. The multifractal spectrum furnishes an indication of the relative dominance of the various scaling exponents in the series and is typically single-humped shaped. It can be fitted by a second-degree polynomial:
f ( α ) = i = 0 2 c i ( α α 0 ) i
where α 0 is the maximum. The width W of the multifractal spectrum is defined as
W = α m a x α m i n
where α m a x and α m i n are the two zeros of the fitted second-degree polynomial. W is often employed to quantify the multifractality in a series. The larger the value of W, the higher the multifractal degree of the series. The maximum α 0 of the multifractal spectrum conveys information about the regular behavior of the process, and it is high for less-regular processes with a finer structure, and small for more regular ones.

2.4. The ROC Analysis

The receiver operating characteristics (ROC) analysis is used for selecting classifiers based on their performance. In binary classification problems, an instance can be labeled as positive or negative, and a classifier maps instance to predicted classes.
Given a classifier and an instance, there are four possible outcomes. The instance is counted (1) as a true positive (TP) if it positive and it is classified as positive; (2) as a false negative (FN) if it is positive and classified as negative; (3) as a true negative (TN) if is negative and is classified as negative; and (4) as a false positive (FP) if it is negative and classified as positive [24]. We can define the following ratios, the true positive rate (TPr) and the false positive rate (FPr):
T P r = N u m b e r o f T P T o t a l p o s i t i v e s ,
F P r = N u m b e r o f F P T o t a l n e g a t i v e s .
The sensitivity is the TPr and the specificity is 1-FPr. An ROC curve is a two-dimensional graph in which the sensitivity is plotted on the Y axis and 1-specificity is plotted on the X axis. In the ROC space, the point (0,1) represents perfect classification, and one point is better than another if it is to the northwest of the first. The diagonal line y = x represents the random classification, and a good classifier has to be represented by a point located in the upper triangle of the ROC space.
Some classifiers yield a score, a numeric value that represents the degree to which an instance is a member of a class. Such a scoring classifier can be used with a threshold to produce a binary classifier, and depending upon the relationship between the output and the threshold, the classifier produces a positive or a negative. Each threshold value produces a point in ROC space; varying the threshold from two extremal values, a curve can be traced through ROC space; this curve is called the ROC curve. The area under the ROC curve (AUC) is generally used to quantify the performance of the classifier. Each point on the ROC curve represents a sensitivity/specificity tradeoff corresponding to a particular threshold. Generally, to maximize such a tradeoff, the point of the ROC curve closest to (0,1) is considered and the corresponding threshold is used.

3. Data and Study Area

Since the effect of the infection by Xylella fastidiosa in olive trees is the rapid branch desiccation [25], we analyzed the Moderate Resolution Imaging Spectroradiometer (MODIS) evapotranspiration (ET) data that are able to monitor the water status of plants and, thus, to detect signs of the presence of disease. The data, which have 500 m spatial resolution and are eight-day sampled, are freely available online (https://lpdaac.usgs.gov) and in the Google Earth Engine (GEE) cloud database. The ET is calculated, summing up soil evaporation ( E s ), canopy evaporation ( E c ), and canopy transpiration ( T c ):
E T = E s + E c + T c
with
E s = f w Δ A S + ( 1 f c ) ρ a C P ( e S e a ) r a s Δ + γ r S S r a S + R H ( e S e a ) β s m ( 1 f W ) Δ A S + ( 1 f c ) ρ a C P ( e S e a ) r a s Δ + γ r S S r a S
E c = f w Δ A S + f c ρ a C P ( e S e a ) r a w c Δ + γ r S w c r a S
T c = ( 1 f w ) Δ A C + f c ρ a C P ( e S e a ) r a t Δ + γ ( 1 + r S t r a S ) .
where f c is the canopy cover, f w is the pixel wet surface fraction, RH is the relative humidity, Δ is the gradient of the saturation vapor pressure–temperature, A s and A c are the available energy to the soil and canopy, respectively, γ is the psychrometric constant, β s m is a parameter related to the soil moisture constraint, r s s and r a s are the surface and aerodynamic resistance for the soil surface, r s w c and r a w c are the surface and aerodynamic resistance for the wet canopy evaporation, and r s t and r a t are the surface and aerodynamic resistance for the canopy transpiration [26].
The analyzed ET data cover the southeastern part of Italy (Figure 1) from 2010 through the present. The length of each pixel time series is 575, and data missing percentage is less than 25%. We investigated areas infected and not infected by Xylella fastidiosa. For the infected area, the number of analyzed pixels is 996, while that of the not-infected area is 1023.
The areas occupied by infected and uninfected plants are in different locations, neither overlapping nor neighboring. The selection of both types of areas (infected and uninfected) was driven by the fact that they are quite homogeneous from the topographical (as shown in the inset of Figure 1) and climatic points of view. These areas are quite flat, especially in the SE part of Apulia (where infected olive trees have been detected) and in the NE part of Apulia and along the Ionian coast of Basilicata (where no traces of Xylella fastidiosa have been found so far), with hilly topographic features in the NE part of Basilicata, characterized by a distinctly Mediterranean climate with cold winters and hot and dry long summers.

4. Results

The ET time series are characterized by oscillating variability, as shown by Figure 2, which represents, as an example, the time variation of ET of a pixel of infected area. Figure 3 and Figure 4 show the periodogram and the heat map of the pixel time series of the infected and not-infected areas; all pixels are modulated by annual and sub-annual (6, 4, and 3 months) cycles that represent the phenological cycles of vegetation correlated with the meteo-climatic oscillations. In order to investigate the inner time dynamics of vegetation not driven by the meteo-climatic oscillations, we filtered them out and analyzed the residuals. Figure 5 shows the normalized residual after the spectral filtering of the pixel time series shown in Figure 2.
We applied the MFDFA to each residual pixel time series, varying the moment order q from −5 to 5 and the scale m from 10 to 1/4 of the length of the series. The gaps were eliminated by simply stitching together the two neighbors [28]. In order to select the optimum degree of the detrending polynomial, we calculated the fluctuation functions F q for each q for detrending polynomial degree p = 1 , , 5 . For each F q we computed the coefficient of determination R 2 of the linear fit of l o g 10 F q l o g 10 ( m ) and analyzed the multifractality of those pixels, whose R 2 0.9 for any q, while those with R 2 < 0.9 for at least one value of q were discarded. Figure 6 and Figure 7 show the variation of < R 2 > p i x e l (average of R 2 over all the selected pixels) versus q, for p = 1 , , 5 for the infected and not-infected areas, respectively; we can see that < R 2 > p i x e l is relatively larger for p = 4 for the areas not affected by Xylella fastidiosa, while it is the largest for p = 3 for the affected areas. Thus, we analyzed the multifractality with p = 3 and p = 4 for the Xylella-affected and Xylella-not-affected areas, respectively. Moreover, with these values of p, the number of selected pixels is 989/996 for the infected area and 1005/1023 for the not-infected area. As an example, Figure 8 and Figure 9 show the fluctuation functions for q = 5 and q = 5 of two pixels, the first for an infected site and the other for an uninfected site. Figure 10, Figure 11 and Figure 12 show the boxplots of the multifractal parameters: h q -range, W, and α 0 .
Moreover, we applied the Fisher–Shannon analysis and calculated the FIM and the N X for the investigated pixel time series of both types of area. Figure 13 and Figure 14 show the boxplots of the two informational quantities.
Table 1 shows the average, the standard deviation, and the minimum and maximum of each multifractal and informational parameter for both the infected and uninfected areas.
We analyzed the receiver operating characteristic (ROC) curve of each of the three multifractal ( h q -range, W, and α 0 ) and of the two informational (FIM and N X ) parameters to test their performance in discriminating between infected and not-infected olive trees. The ROC curves are well known to test the performance of binary classifiers [24]. The ROC curve shows the relationship between the TPr and the FPr. For each of the five parameters, we constructed the corresponding ROC curve by varying a threshold. Focusing, for instance, on the parameter W that is the width of the multifractal spectrum, there are 989 values for infected pixels (with a mean μ i n f e c t e d = 0.5222 ) and 1005 for uninfected pixels (with a mean μ u n i n f e c t e d = 0.8168 ). W ranges from the minimum 0.1410 to the maximum 1.4920 (see Table 1). The threshold ranges from the minimum to the maximum of all the values of W. After sorting all values of W in increasing order and fixing a threshold F, since μ i n f e c t e d < μ u n i n f e c t e d , a TP is a value of infected pixel below F, an FP is a value of uninfected pixel below F, an FN is a value of infected pixel above F, and a TN is a value of uninfected pixel above F. Thus, for this value F of the threshold, the TPr and the FPr can be calculated and one point of the ROC curve is obtained. Changing the value of the threshold among all those between the minimum and the maximum and repeating the same procedure, the entire ROC curve is obtained. After cosntructing the ROC curve, the value of the optimal threshold corresponds to the point of the ROC curve that is the closest to (0,1).
Figure 15 shows the ROC curve for the five analyzed parameters. The thresholds corresponding to the point of the ROC curve closest to (0,1) along with the TPr and the FPr for each parameter are reported in Table 2.
Figure 16 shows the corresponding AUC. It is clearly evident that all the parameters can be considered good classifiers and the maximum α 0 is the best one.

5. Discussion and Conclusions

Recent investigations performed by Telesca et al. [29] showed that MODIS satellite ET, along with other vegetation indices, was effective for assessing the deterioration of pinus tree vegetation by another parasite, Toumeyella parvicornis, suggesting the use of this parameter for the monitoring of pest and parasite attack at both landscape and field scale.
According to [30], Xylella is not the primary cause of the rapid olive desiccation, since the pathogens damage the plants that have been made weaker due to environmental criticalities such as, for example, the reduction of rainfall, the excess of chemical herbicides, the impoverishment of soil organic matter, etc. In this view, these critical factors create an inhospitable environment for the plant, which loses vigor and increases its vulnerability to diseases and parasites, such as Xylella fastidiosa. Thus, ET could characterize and capture the impact of infection by Xylella fastidiosa on plants, since one of the recognizable effects is that the plant dries up and dies. In fact, the ET is well suited to give information about the water status of plants, since it furnishes an indirect measure of the loss of water content of vegetation. Therefore, since the most important symptom of Xylella fastidiosa-induced disease is the rapid desiccation, it is expected that ET makes it possible to detect the presence of this bacterium.
All the investigated sites, both infected and healthy, show a cyclic component in the ET time variability that is very likely linked with the meteo-climatic seasonal cycles. Two periodicities, in particular, are evidenced, the yearly and the semiannual one. The semiannual periodicity appears more powerful for the infected pixels than for the healthy ones; this is probably due the semestral duration of the vector infectivity that generally lasts from May to October.
The application of MFDFA and the Fisher–Shannon method to the time series of pixels covering healthy and Xylella fastidiosa-infected olive groves in southern Italy allowed us to obtain new insights into the time dynamics of ET. The ET time series of the infected sites show an SEP larger and an FIM lower than those of the healthy sites; this indicates that their time variability is characterized by a larger disorder or less organization. Since FIM and SEP relate, respectively, to the local and global properties of the distribution of the series, the larger SEP of the infected sites would suggest that the global variations of their distribution are dominant, while the distribution of the ET series for the healthy sites would be dominated by the local variations.
The two types of sites have different informational response, and this could be correlated to the different nutritional processes that in the infected trees are seriously damaged. The nutritional system of plants is governed by processes that control water and nutrient flux from the roots to the stem and up to the leaves; thus, a healthy tree is characterized by a nutritional system more complex that involves an interaction with the environment. A healthy tree can react more efficiently to the local environmental factors, implying a higher resilience to the external factors that is reflected in a larger heterogeneity, and, thus, in a larger FIM or lower SEP.
In addition, the multifractal parameters h q -range, multifractal width W, and α 0 indicate that the healthy sites are characterized by larger heterogeneity and complexity in the ET time variation. The h q -range and the width W quantify the variety of the scaling exponents of the series; therefore, large h q -range and width W indicate that the ET series of healthy sites show a relatively irregular behavior with a variety of scaling exponents larger than that shown by the infected sites that are characterized by a more regular behavior with more homogeneous variations. The maximum of the multifractal spectrum α 0 is lower for the infected sites that, therefore, are more regular processes with coarser structure. The larger homogeneity and regularity of the ET of the infected sites could also be an indication of the less resilient behavior versus the local environmental perturbations; in fact, the status of desiccation induced by Xylella fastidiosa makes the nutritional control mechanism of the infected trees less efficient in reacting to the environmental factors, leading, finally, to the death of the infected plant.
The ROC analysis shows the good performance of the five informational and multifractal parameters in discriminating healthy from infected sites but it suggests that the multifractal patterns can be more effective than the informational patterns in ET time series in discerning signs of Xylella fastidiosa infection; furthermore, among the multifractal parameters, the maximum of the multifractal spectrum performs better than the others.
In the future, we aim at enlarging the analysis of these data, focusing, in particular, on two aspects: (1) the application of different classification methods to find the most efficient procedure that allows the best discrimination between healthy and infected sites; and (2) the investigation of the time variation of multifractal and informational parameters in order to better determine the outbreak of the infection. This last point, of course, requires the availability of a dataset much longer than that analyzed in this work. In fact, in order to perform a time-varying analysis, a fixed-length window has to be moved over the entire dataset and the parameters calculated within each window, which has to be large enough to obtain reliable results and smaller enough (compared with the size of the dataset) to have a sufficient number of windows.
However, our results point to the role of ET in contributing to the diagnosis of status of vegetation deterioration due to the attacks of pests and parasites, highlighting the relevance of this parameter as one of the most useful vegetation indices, whose importance has already been assessed in climate change investigations, environmental monitoring and risk estimation, land management, agricultural practices, and food security, thus contributing to the definition of operational tools for the monitoring of biophysical parameters of the vegetation status.

Author Contributions

Conceptualization, L.T. and R.L.; methodology, L.T.; software, M.L.; formal analysis, L.T.; investigation, L.T. and R.L.; resources, R.L.; data curation, F.F. and N.A.; writing—original draft preparation, L.T.; writing—review and editing, L.T. and R.L.; visualization, L.T.; project administration, R.L.; funding acquisition, R.L. All authors have read and agreed to the published version of the manuscript.

Funding

This research was supported by the project COELUM, funded by the National Research Council of Italy.

Data Availability Statement

The data are freely available online (https://lpdaac.usgs.gov) and in the Google Earth Engine (GEE) cloud database.

Conflicts of Interest

The authors declare no conflict of interest.

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Figure 1. Infected and healthy sites. The infected sites were selected on the basis of [27].
Figure 1. Infected and healthy sites. The infected sites were selected on the basis of [27].
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Figure 2. Pixel time series of an infected site.
Figure 2. Pixel time series of an infected site.
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Figure 3. Periodogram of the time series of the MODIS ET pixels covering the not-infected area.
Figure 3. Periodogram of the time series of the MODIS ET pixels covering the not-infected area.
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Figure 4. Periodogram of the time series of the MODIS ET pixels covering the infected area.
Figure 4. Periodogram of the time series of the MODIS ET pixels covering the infected area.
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Figure 5. Normalized residual of pixel time series shown in Figure 2.
Figure 5. Normalized residual of pixel time series shown in Figure 2.
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Figure 6. R 2 of the pixels covering the infected area.
Figure 6. R 2 of the pixels covering the infected area.
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Figure 7. R 2 of the pixels covering the not-infected area.
Figure 7. R 2 of the pixels covering the not-infected area.
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Figure 8. Fluctuation functions for q = 5 and q = 5 of an Xylella-affected pixel.
Figure 8. Fluctuation functions for q = 5 and q = 5 of an Xylella-affected pixel.
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Figure 9. Fluctuation functions for q = 5 and q = 5 of an Xylella-unaffected pixel.
Figure 9. Fluctuation functions for q = 5 and q = 5 of an Xylella-unaffected pixel.
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Figure 10. Boxplot of the h q -range.
Figure 10. Boxplot of the h q -range.
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Figure 11. Boxplot of the width W.
Figure 11. Boxplot of the width W.
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Figure 12. Boxplot of the maximum α 0 .
Figure 12. Boxplot of the maximum α 0 .
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Figure 13. Boxplot of the FIM.
Figure 13. Boxplot of the FIM.
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Figure 14. Boxplot of the SEP.
Figure 14. Boxplot of the SEP.
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Figure 15. ROC curves for the five investigated parameters.
Figure 15. ROC curves for the five investigated parameters.
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Figure 16. AUC for the five investigated parameters.
Figure 16. AUC for the five investigated parameters.
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Table 1. Average, standard deviation, and minimum and maximum of the obtained parameters for the Xylella affected (unaffected) sites.
Table 1. Average, standard deviation, and minimum and maximum of the obtained parameters for the Xylella affected (unaffected) sites.
ParameterAverage σ MinimumMaximum
h q -range0.1634 (0.3784)0.0806 (0.1691)0.0156 (0.0272)0.58937 (0.9732)
W0.5222 (0.8168)0.1299 (0.2106)0.1410 (0.2157)0.9983 (1.4920)
α 0 1.042 (/1.2172)0.0763 (0.0875)0.7798 (0.9686)1.3171 (1.4844)
FIM1.080 (1.2204)0.0689 (0.1610)0.9582 (0.9716)1.4880 (2.0421)
SEP1.0282 (0.9845)0.0235 (0.0515)0.8166 (0.6278)1.0774 (1.0719)
Table 2. Threshold, TPr, and FPr corresponding to the point of the ROC curve closest to (0,1).
Table 2. Threshold, TPr, and FPr corresponding to the point of the ROC curve closest to (0,1).
ParameterThresholdTPrFPr
h q -range0.22510.83420.2109
W0.63580.83370.2022
α 0 1.12780.85640.1443
FIM1.10400.76340.2868
SEP1.01830.74120.2493
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Telesca, L.; Abate, N.; Faridani, F.; Lovallo, M.; Lasaponara, R. Discerning Xylella fastidiosa-Infected Olive Orchards in the Time Series of MODIS Terra Satellite Evapotranspiration Data by Using the Fisher–Shannon Analysis and the Multifractal Detrended Fluctuation Analysis. Fractal Fract. 2023, 7, 466. https://doi.org/10.3390/fractalfract7060466

AMA Style

Telesca L, Abate N, Faridani F, Lovallo M, Lasaponara R. Discerning Xylella fastidiosa-Infected Olive Orchards in the Time Series of MODIS Terra Satellite Evapotranspiration Data by Using the Fisher–Shannon Analysis and the Multifractal Detrended Fluctuation Analysis. Fractal and Fractional. 2023; 7(6):466. https://doi.org/10.3390/fractalfract7060466

Chicago/Turabian Style

Telesca, Luciano, Nicodemo Abate, Farid Faridani, Michele Lovallo, and Rosa Lasaponara. 2023. "Discerning Xylella fastidiosa-Infected Olive Orchards in the Time Series of MODIS Terra Satellite Evapotranspiration Data by Using the Fisher–Shannon Analysis and the Multifractal Detrended Fluctuation Analysis" Fractal and Fractional 7, no. 6: 466. https://doi.org/10.3390/fractalfract7060466

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