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Journal of Molecular Pathology, Volume 5, Issue 1

March 2024 - 9 articles

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Articles (9)

  • Article
  • Open Access
1 Citations
2,314 Views
20 Pages

7 March 2024

Respiratory viruses are the causative agents responsible for seasonal epidemics and occasional pandemic outbreaks and are a leading cause of death worldwide. Type I interferon (IFNα/β) signaling in the lung epithelial cells plays a major r...

  • Review
  • Open Access
2,131 Views
14 Pages

The Role of IRF8 Polymorphisms in Systemic Sclerosis Development and Pathogenesis

  • Anna Mennella,
  • Giuseppe Ocone,
  • Katia Stefanantoni and
  • Loredana Frasca

2 March 2024

Systemic sclerosis (SSc) is a rare autoimmune disease whose molecular mechanisms are not yet fully understood. There is no definitive cure, and the main causes of death are pulmonary fibrosis and pulmonary arterial hypertension. Here, we focus on the...

  • Article
  • Open Access
2 Citations
4,165 Views
15 Pages

Comparing Classifications from Multiple Variant Annotation Software Solutions Using Real-World Next Generation Sequencing Data from Oncology Testing

  • Roy Khalife,
  • Tara M. Love,
  • Lara Sucheston-Campbell,
  • Michael J. Clark,
  • Helle Sorensen,
  • Shuba Krishna and
  • Anthony Magliocco

1 March 2024

Variant annotation is an important step in deciphering the functional impact of genomic variants and their association with diseases. In this study, we analyzed 80 pan-cancer cases that underwent comprehensive genomic testing and compared the auto-cl...

  • Article
  • Open Access
4 Citations
2,719 Views
15 Pages

6 February 2024

The RYK gene encodes a receptor-like tyrosine kinase crucial for several biological processes, including development, tissue homeostasis, and cancer. This study utilized data from the Cancer Genome Atlas Project (TCGA) to evaluate RYK expression at b...

  • Article
  • Open Access
1 Citations
4,047 Views
21 Pages

A Novel Single-Tube Next Generation Sequencing Assay for B-Cell Receptor Clonality Testing

  • Landon Pastushok,
  • Shrutii Sarda,
  • Karen Mochoruk,
  • Wayne Hill,
  • Loni T. Pickle,
  • Michelle Toro,
  • Carolina Gonzalez,
  • Stephanie Ostresh,
  • Timothy J. Looney and
  • Chenchen Yang
  • + 6 authors

2 February 2024

B-cell neoplasms possess clonal B-cell receptor rearrangements (BCR clonotype lineages) that can be identified by sequencing the B-cell repertoire for use in diagnostics, risk stratification, and high-sensitivity monitoring. BCR somatic hypermutation...

  • Article
  • Open Access
5 Citations
6,425 Views
17 Pages

AI-Enhanced Blood Cell Recognition and Analysis: Advancing Traditional Microscopy with the Web-Based Platform IKOSA

  • Manuel Campos-Medina,
  • Aiden Blumer,
  • Patrick Kraus-Füreder,
  • Michael Mayrhofer-Reinhartshuber,
  • Philipp Kainz and
  • Johannes A. Schmid

25 January 2024

Microscopy of stained blood smears is still a ubiquitous technique in pathology. It is often used in addition to automated electronic counters or flow cytometers to evaluate leukocytes and their morphologies in a rather simple manner and has low requ...

  • Article
  • Open Access
4 Citations
3,510 Views
17 Pages

Human Metastatic Melanoma Cell Lines Panel for In Vitro and In Vivo Investigations

  • Ekaterina N. Kosobokova,
  • Nadezhda A. Kalinina,
  • Ksenia M. Konoplina,
  • Anastasiia A. Malchenkova,
  • Alexandra E. Evdokimova,
  • Marina V. Piniugina,
  • Irina I. Khan,
  • Ilya A. Kislyak,
  • Anna A. Basharina and
  • Anna N. Grishanina
  • + 6 authors

8 January 2024

The melanoma origin of cell lines obtained from the axillary lymph node (mel Kas, mel Pet, and mel Lap from patients with a verified diagnosis) was confirmed by the detection of the Melan A melanocyte marker expression. A hyperdiploid (2n+) for the m...

  • Article
  • Open Access
6 Citations
3,365 Views
10 Pages

Novel Approach to Proficiency Testing Highlights Key Practice Variations in Cancer Biomarker Delivery

  • Kassandra R. Bisson,
  • Jennifer R. Won,
  • Andrea Beharry,
  • Michael D. Carter,
  • Shaan Dudani,
  • John G. Garratt,
  • Jonathan M. Loree,
  • Stephanie Snow,
  • Stephen Yip and
  • Brandon S. Sheffield

5 January 2024

Biomarkers are fundamental to modern oncology practice, forming a close link to pathology practice. Pathology results must be accurate, timely, comprehensive, and comprehendible. External proficiency testing is a key tool in maintaining biomarker qua...