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Search Results (428)

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Keywords = PM damage

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17 pages, 5430 KB  
Article
Airborne PM10 Decreases Ku80 Expression and Ku70–Ku80 Heterodimer Levels of the Non-Homologous End Joining Repair Pathway in Lung Epithelial Cells
by Ericka Marel Quezada-Maldonado, Javier Ivan Lozolla-Ortiz, Miguel Santibáñez-Andrade, Rocío Morales-Bárcenas, Claudia M. García-Cuellar and Yesennia Sánchez-Pérez
Int. J. Mol. Sci. 2025, 26(18), 8936; https://doi.org/10.3390/ijms26188936 - 13 Sep 2025
Viewed by 554
Abstract
The global population constantly breathes particulate matter with an aerodynamic diameter of ≤10 µm (PM10)—a human carcinogen linked to lung cancer. Previous studies have indicated that PM10 causes DNA damage, including double-strand breaks (DSBs). In particular, DSBs are primarily repaired [...] Read more.
The global population constantly breathes particulate matter with an aerodynamic diameter of ≤10 µm (PM10)—a human carcinogen linked to lung cancer. Previous studies have indicated that PM10 causes DNA damage, including double-strand breaks (DSBs). In particular, DSBs are primarily repaired by the non-homologous end joining (NHEJ) pathway, which is essential for maintaining genomic stability; however, the effects of PM10 exposure on this pathway are unknown. To address this, A549 lung epithelial cells were exposed to 10 µg/cm2 of PM10 for 6, 12, and 24 h. We determined that DSBs increased with prolonged exposure, and an increase in the frequency of micronuclei was found. Despite the accumulated DNA damage, no changes in the cell cycle were observed. Reductions in the levels of the Ku80 gene and protein, as well as the Ku70–Ku80 heterodimer—which is essential for initiating NHEJ-mediated repair—were observed. Levels of Artemis (which is responsible for processing DNA damage) remained stable, while levels of the XRCC4 gene and protein (responsible for completing repair) decreased. We conclude that PM10 disrupts two key proteins in the NHEJ pathway, impairing the capacity for DSB repair. This could promote the accumulation of DNA damage and induce genomic instability, contributing to the development of cancer. Full article
(This article belongs to the Special Issue Molecular Mechanism in DNA Replication and Repair)
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24 pages, 5943 KB  
Article
Physico-Chemical Characterisation of Particulate Matter and Ash from Biomass Combustion in Rural Indian Kitchens
by Gopika Indu, Shiva Nagendra Saragur Madanayak and Richard J. Ball
Air 2025, 3(3), 23; https://doi.org/10.3390/air3030023 - 2 Sep 2025
Viewed by 557
Abstract
In developing countries, indoor air pollution in rural areas is often attributed to the use of solid biomass fuels for cooking. Such fuels generate particulate matter (PM), carbon monoxide (CO), carbon dioxide (CO2), polyaromatic hydrocarbons (PAHs), and volatile organic compounds (VOCs). [...] Read more.
In developing countries, indoor air pollution in rural areas is often attributed to the use of solid biomass fuels for cooking. Such fuels generate particulate matter (PM), carbon monoxide (CO), carbon dioxide (CO2), polyaromatic hydrocarbons (PAHs), and volatile organic compounds (VOCs). PM created from biomass combustion is a pollutant particularly damaging to health. This rigorous study employed a personal sampling device and multi-stage cascade impactor to collect airborne PM (including PM2.5) and deposited ash from 20 real-world kitchen microenvironments. A robust analysis of the PM was undertaken using a range of morphological, physical, and chemical techniques, the results of which were then compared to a controlled burn experiment. Results revealed that airborne PM was predominantly carbon (~85%), with the OC/EC ratio varying between 1.17 and 11.5. Particles were primarily spherical nanoparticles (50–100 nm) capable of deep penetration into the human respiratory tract (HRT). This is the first systematic characterisation of biomass cooking emissions in authentic rural kitchen settings, linking particle morphology, chemistry and toxicology at health-relevant scales. Toxic heavy metals like Cr, Pb, Cd, Zn, and Hg were detected in PM, while ash was dominated by crustal elements such as Ca, Mg and P. VOCs comprised benzene derivatives, esters, ethers, ketones, tetramethysilanes (TMS), and nitrogen-, phosphorus- and sulphur-containing compounds. This research showcases a unique collection technique that gathered particles indicative of their potential for penetration and deposition in the HRT. Impact stems from the close link between the physico-chemical properties of particle emissions and their environmental and epidemiological effects. By providing a critical evidence base for exposure modelling, risk assessment and clean cooking interventions, this study delivers internationally significant insights. Our methodological innovation, capturing respirable nanoparticles under real-world conditions, offers a transferable framework for indoor air quality research across low- and middle-income countries. The findings therefore advance both fundamental understanding of combustion-derived nanoparticle behaviour and practical knowledge to inform public health, environmental policy, and the UN Sustainable Development Goals. Full article
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16 pages, 1947 KB  
Article
Inhibitory Effects of Aquadag, a Black Carbon Surrogate, on Microbial Growth via Surface-Mediated Stress: Evidence from Adenosine Triphosphate Assay
by Hwangyu Yoo, Saehee Lim, I Seul Cho, Haneul Im, Euna Lee, Siyoung Choi, Han-Suk Kim, Sohee Jeong and Younggyun Choi
Toxics 2025, 13(9), 719; https://doi.org/10.3390/toxics13090719 - 27 Aug 2025
Viewed by 519
Abstract
Black carbon (BC) from incomplete combustion sources including traffic emissions affects human health due to its physical characteristics and ubiquity in urban environments. We examined the effects of BC on microbial growth in the presence of particulate matter (PM), using Aquadag as a [...] Read more.
Black carbon (BC) from incomplete combustion sources including traffic emissions affects human health due to its physical characteristics and ubiquity in urban environments. We examined the effects of BC on microbial growth in the presence of particulate matter (PM), using Aquadag as a surrogate for BC. Brunauer–Emmett–Teller analysis showed BC had a specific surface area of 123.2 m2 g−1, with over 90% of particles smaller than 100 nm, indicating strong surface interaction potential. Pseudomonas aeruginosa PA14 was cultured for 7 days with various BC concentrations and fixed PM. Increasing BC (0–100 ng mL−1) significantly inhibited growth, evidenced by a decline in cellular adenosine triphosphate (cATP) with a slope of −1.296 ± 0.258 cATP ng mL−1/BC ng mL−1. The seven-day mean cATP slope ranged from 77 to 131, with control at 161. The biomass stress index (BSI) increased by 56%, rising from 28.6 ± 8.8% (control) to 44.6 ± 16.1% under high BC. The BSI change was minimal on day 1 (<+0.1% per BC ng mL−1) but greater on days 5 (+0.125 ± 0.052%) and 7 (+0.130 ± 0.075%). BC does not cause immediate microbial death, but prolonged exposure induces cumulative stress, damages synthetic enzymes, inhibits growth, and may lead to cell death, with potential public health implications. Full article
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19 pages, 724 KB  
Review
The Role of Oxidative Stress in the Pathogenesis of Childhood Asthma: A Comprehensive Review
by Despoina Koumpagioti, Margarita Dimitroglou, Barbara Mpoutopoulou, Dafni Moriki and Konstantinos Douros
Children 2025, 12(9), 1110; https://doi.org/10.3390/children12091110 - 23 Aug 2025
Viewed by 758
Abstract
This review aims to provide a comprehensive overview of how oxidative stress drives inflammation, structural remodeling, and clinical expression of childhood asthma, while critically appraising emerging redox-sensitive biomarkers and antioxidant-focused preventive and therapeutic strategies. Oxidative stress arises when reactive oxygen species (ROS) and [...] Read more.
This review aims to provide a comprehensive overview of how oxidative stress drives inflammation, structural remodeling, and clinical expression of childhood asthma, while critically appraising emerging redox-sensitive biomarkers and antioxidant-focused preventive and therapeutic strategies. Oxidative stress arises when reactive oxygen species (ROS) and reactive nitrogen species (RNS) outpace airway defenses. This surplus provokes airway inflammation: ROS/RNS activate nuclear factor kappa-B (NF-κB) and activator protein-1 (AP-1), recruit eosinophils and neutrophils, and amplify type-2 cytokines. Normally, an antioxidant network—glutathione (GSH), enzymes such as catalase (CAT) and superoxide dismutase (SOD), and nuclear factor erythroid 2-related factor 2 (Nrf2)—maintains redox balance. Prenatal and early exposure to fine particulate matter <2.5 micrometers (µm) (PM2.5), aeroallergens, and tobacco smoke, together with polymorphisms in glutathione S-transferase P1 (GSTP1) and CAT, overwhelm these defenses, driving epithelial damage, airway remodeling, and corticosteroid resistance—the core of childhood asthma pathogenesis. Clinically, biomarkers such as exhaled 8-isoprostane, hydrogen peroxide (H2O2), and fractional exhaled nitric oxide (FeNO) surge during exacerbations and predict relapses. Therapeutic avenues include Mediterranean-style diet, regular aerobic exercise, pharmacological Nrf2 activators, GSH precursors, and mitochondria-targeted antioxidants; early trials report improved lung function and fewer attacks. Ongoing translational research remains imperative to substantiate these approaches and to enable the personalization of therapy through individual redox status and genetic susceptibility, ultimately transforming the care and prognosis of pediatric asthma. Full article
(This article belongs to the Section Pediatric Pulmonary and Sleep Medicine)
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23 pages, 2990 KB  
Article
Self-Healing Asphalt Mixtures Meso-Modelling: Impact of Capsule Content on Stiffness and Tensile Strength
by Gustavo Câmara, Nuno Monteiro Azevedo and Rui Micaelo
Sustainability 2025, 17(16), 7502; https://doi.org/10.3390/su17167502 - 19 Aug 2025
Cited by 1 | Viewed by 522
Abstract
Capsule-based self-healing technologies offer a promising solution to extend pavement service life without requiring external activation. The effect of the capsule content on the mechanical behaviour of self-healing asphalt mixtures still needs to be understood. This study presents a numerical evaluation of the [...] Read more.
Capsule-based self-healing technologies offer a promising solution to extend pavement service life without requiring external activation. The effect of the capsule content on the mechanical behaviour of self-healing asphalt mixtures still needs to be understood. This study presents a numerical evaluation of the isolated effect of incorporating capsules containing encapsulated rejuvenators, at different volume contents, on the stiffness and strength of asphalt mixtures through a three-dimensional discrete-based programme (VirtualPM3DLab), which has been shown to predict well the experimental behaviour of asphalt mixtures. Uniaxial tension–compression cyclic and monotonic tensile tests on notched specimens are carried out for three capsule contents commonly adopted in experimental investigations (0.30, 0.75, and 1.25 wt.%). The results show that the effect on the stiffness modulus progressively increases as the capsule content grows in the asphalt mixture, with a reduction ranging from 4.3% to 12.3%. At the same time, the phase angle is marginally affected. The capsule continuum equivalent Young’s modulus has minimum influence on the overall rheological response, suggesting that the most critical parameter affecting asphalt mixture stiffness is the capsule content. Finally, while the peak tensile strength shows a maximum reduction of 12.4% at the highest capsule content, the stress–strain behaviour and damage evolution of the specimens remain largely unaffected. Most damaged contacts, which mainly include aggregate–mastic and mastic–mastic contacts, are highly localised around the notch tips. Contacts involving capsules remained intact during early and intermediate loading stages and only fractured during the final damage stage, suggesting a delayed activation consistent with the design of healing systems. The findings suggest that capsules within the studied contents may have a moderate impact on the mechanical properties of asphalt mixtures, especially for high-volume contents. For this reason, contents higher than 0.75 wt.% should be applied with caution. Full article
(This article belongs to the Section Sustainable Materials)
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19 pages, 11804 KB  
Article
Assessing the Impact of Ammonia Emissions from Mink Farming in Denmark on Human Health and Critical Load Exceedance
by Lise Marie Frohn, Jesper Leth Bak, Jørgen Brandt, Jesper Heile Christensen, Steen Gyldenkærne and Camilla Geels
Atmosphere 2025, 16(8), 966; https://doi.org/10.3390/atmos16080966 - 15 Aug 2025
Viewed by 748
Abstract
In this study, the objective is to assess the impacts of NH3 emissions from mink farming on human health and nature, which are sensitive to atmospheric nitrogen deposition. The impact-pathway approach is applied to follow the emissions from source to impact on [...] Read more.
In this study, the objective is to assess the impacts of NH3 emissions from mink farming on human health and nature, which are sensitive to atmospheric nitrogen deposition. The impact-pathway approach is applied to follow the emissions from source to impact on human health in Europe (including Denmark) and from source to critical nitrogen load exceedances for NH3-sensitive nature in Denmark. The Danish Eulerian Hemispheric Model (DEHM) is used for modelling the air pollution concentrations in Europe and nitrogen depositions on land and water surfaces in Denmark arising from NH3 emissions from mink farming in Denmark. The Economic Valuation of Air (EVA) pollution model system is applied for deriving the health effects and corresponding socio-economic costs in Denmark and Europe arising from the emissions from mink farming. On a local scale in Denmark, the deposition resulting from the NH3 emissions from mink farming is modelled using the results from the OML-DEP model at a high resolution to derive the critical nitrogen load exceedances for Danish nature areas sensitive to NH3. From the analysis of the impacts through human exposure to the air pollutants PM2.5, NO2, and O3, it is concluded that in total, ~60 premature deaths annually in Europe, including Denmark, can be attributed to the emissions of NH3 to the atmosphere from the mink farming sector in Denmark. This corresponds to annual socio-economic costs on the order of EUR 142 million. From the analysis of critical load exceedances, it is concluded that an exceedance of the critical load of nitrogen deposition of ~14,600 hectares (ha) of NH3-sensitive nature areas in Denmark can be attributed to NH3 emissions from mink farming. The cost for restoring nature areas of this size, damaged by eutrophication from excess nitrogen deposition, is estimated to be ~EUR 110 million. In 2020, the mink sector in Denmark was shut down in connection with the COVID-19 pandemic. All mink were culled by order of the Danish Government, and now in 2025, the process of determining the level of financial compensation to the farmers is still ongoing. The socio-economic costs following the impacts on human health in Europe and nitrogen-sensitive nature in Denmark of NH3 emissions from the now non-existing mink sector can therefore be viewed as socio-economic benefits. In this study, these benefits are compared with the expected level of compensation from the Danish Government to the mink farmers, and the conclusion is that the compensation to the mink farmers breaks even with the benefits from reduced NH3 emissions over a timescale of ~20 years. Full article
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21 pages, 2548 KB  
Article
Protective Effects of Inula japonica Leaf Extract Against PM10-Induced Oxidative Stress in Human Keratinocytes
by Yea Jung Choi, So-Ri Son, Sullim Lee and Dae Sik Jang
Curr. Issues Mol. Biol. 2025, 47(8), 639; https://doi.org/10.3390/cimb47080639 - 9 Aug 2025
Viewed by 407
Abstract
This study aimed to evaluate the protective effects of Inula japonica leaf extract against PM10-induced oxidative stress in normal human keratinocytes. Keratinocytes were pretreated with various concentrations of Inula japonica leaf extract and subsequently exposed to PM10. Cell viability, ROS production, [...] Read more.
This study aimed to evaluate the protective effects of Inula japonica leaf extract against PM10-induced oxidative stress in normal human keratinocytes. Keratinocytes were pretreated with various concentrations of Inula japonica leaf extract and subsequently exposed to PM10. Cell viability, ROS production, gene and protein expression (qRT-PCR and Western blot), and UHPLC-MS profiling were assessed. Network pharmacology analysis was conducted using database-predicted compounds of Inulae Flos. The extract significantly reduced PM10-induced ROS generation and restored the expression of epidermal barrier-related genes such as loricrin. It also inhibited phosphorylation of MAPKs (ERK, p38) and modulated apoptotic and inflammatory markers including Bax, p53, MMP-9, and COX-2. UHPLC-MS analysis identified eight compounds not previously reported in our earlier study, which may contribute to the extract’s protective effects. Inula japonica leaf extract exerts protective effects against PM10-induced skin damage by reducing oxidative stress and inflammation in keratinocytes. These findings support its potential as a therapeutic candidate for pollution-related skin disorders. Full article
(This article belongs to the Section Biochemistry, Molecular and Cellular Biology)
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13 pages, 1770 KB  
Article
Inhibitory Effects of 3-Deoxysappanchalcone on Particulate-Matter-Induced Pulmonary Injury
by Chang-Woo Ryu, Jinhee Lee, Gyuri Han, Jin-Young Lee and Jong-Sup Bae
Curr. Issues Mol. Biol. 2025, 47(8), 608; https://doi.org/10.3390/cimb47080608 - 1 Aug 2025
Cited by 1 | Viewed by 402
Abstract
Fine particulate matter (PM2.5) exposure has been linked to increased lung damage due to compromised vascular barrier function, while 3-deoxysappanchalcone (3-DSC), a chalcone derived from Caesalpinia sappan, is known for its pharmacological benefits such as anti-cancer, anti-inflammatory, and antioxidant effects; [...] Read more.
Fine particulate matter (PM2.5) exposure has been linked to increased lung damage due to compromised vascular barrier function, while 3-deoxysappanchalcone (3-DSC), a chalcone derived from Caesalpinia sappan, is known for its pharmacological benefits such as anti-cancer, anti-inflammatory, and antioxidant effects; however, its potential role in mitigating PM2.5-induced pulmonary damage remains unexplored. To confirm the inhibitory effects of 3-DSC on PM2.5-induced pulmonary injury, this research focused on evaluating how 3-DSC influences PM2.5-induced disruption of the barrier of the endothelial cells (ECs) in the lungs and the resulting pulmonary inflammation. Permeability, leukocyte migration, proinflammatory protein activation, reactive oxygen species (ROS) generation, and histology were assessed in PM2.5-treated ECs and mice. This study demonstrated that 3-DSC effectively neutralized the reactive oxygen species (ROS) generated by PM2.5 exposure in the lung endothelial cells, suppressing ROS-triggered p38 MAPK activation while enhancing Akt signaling pathways critical to preserving vascular barrier function. In animal models, 3-DSC administration markedly decreased vascular permeability, attenuated the influx of immune cells into the lung tissue, and lowered inflammatory mediators like cytokines in the airways of PM2.5-exposed mice. These data suggest that 3-DSC might exert protective effects on PM2.5-induced inflammatory lung injury and vascular hyperpermeability. Full article
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19 pages, 9109 KB  
Article
Metformin Enhances Doxycycline Efficacy Against Pasteurella multocida: Evidence from In Vitro, In Vivo, and Morphological Studies
by Nansong Jiang, Weiwei Wang, Qizhang Liang, Qiuling Fu, Rongchang Liu, Guanghua Fu, Chunhe Wan, Longfei Cheng, Yu Huang and Hongmei Chen
Microorganisms 2025, 13(8), 1724; https://doi.org/10.3390/microorganisms13081724 - 23 Jul 2025
Viewed by 500
Abstract
Pasteurella multocida (Pm) is a zoonotic pathogen that poses a significant threat to animal health and causes substantial economic losses, further aggravated by rising tetracycline resistance. To restore the efficacy of tetracyclines to Pm, we evaluated the synergistic antibacterial activity [...] Read more.
Pasteurella multocida (Pm) is a zoonotic pathogen that poses a significant threat to animal health and causes substantial economic losses, further aggravated by rising tetracycline resistance. To restore the efficacy of tetracyclines to Pm, we evaluated the synergistic antibacterial activity of doxycycline combined with metformin, an FDA-approved antidiabetic agent. Among several non-antibiotic adjuvant candidates, metformin exhibited the most potent in vitro synergy with doxycycline, especially against capsular serogroup A strain (PmA). The combination demonstrated minimal cytotoxicity and hemolysis in both mammalian and avian cells and effectively inhibited resistance development under doxycycline pressure. At 50 mg/kg each, the combination of metformin and doxycycline significantly reduced mortality in mice and ducks acutely infected with PmA (from 100% to 60%), decreased pulmonary bacterial burdens, and alleviated tissue inflammation and damage. Mechanistic validation confirmed that metformin enhances membrane permeability in Pm without compromising membrane integrity, dissipates membrane potential, increases intracellular doxycycline accumulation, and downregulates the transcription of the tetracycline efflux gene tet(B). Morphological analyses further revealed pronounced membrane deformation and possible leakage of intracellular contents. These findings highlight metformin as a potent, low-toxicity tetracycline adjuvant with cross-species efficacy, offering a promising therapeutic approach for managing tetracycline-resistant Pm infections. Full article
(This article belongs to the Section Veterinary Microbiology)
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17 pages, 2234 KB  
Article
Impact of Live Ligilactobacillus salivarius CCFM1332 and Its Postbiotics on Porphyromonas gingivalis Colonization, Alveolar Bone Resorption and Inflammation in a Rat Model of Periodontitis
by Qing Hong, Yu Ren, Xin Tang, Bingyong Mao, Qiuxiang Zhang, Jianxin Zhao, Shumao Cui and Zhenmin Liu
Microorganisms 2025, 13(7), 1701; https://doi.org/10.3390/microorganisms13071701 - 20 Jul 2025
Viewed by 734
Abstract
Periodontitis is a chronic inflammatory disease caused by periodontopathic bacteria such as Porphyromonas gingivalis (P. gingivalis), which leads to alveolar bone destruction and systemic inflammation. Emerging evidence suggests that probiotics may mitigate periodontal pathology. To systematically evaluate the alleviative effects and [...] Read more.
Periodontitis is a chronic inflammatory disease caused by periodontopathic bacteria such as Porphyromonas gingivalis (P. gingivalis), which leads to alveolar bone destruction and systemic inflammation. Emerging evidence suggests that probiotics may mitigate periodontal pathology. To systematically evaluate the alleviative effects and mechanisms of different forms of probiotics, including live bacteria and postbiotics, on periodontitis, we first screened and identified Ligilactobacillus salivarius CCFM1332 (L. salivarius CCFM1332) through in vitro antibacterial and anti-biofilm activity assays. Subsequently, we investigated its therapeutic potential in a rat model of experimental periodontitis. The results demonstrated that both live L. salivarius CCFM1332 (PL) and its postbiotics (PP) significantly reduced the gingival index (GI) and probing depth (PD) in rats, while suppressing oral colonization of P. gingivalis. Serum pro-inflammatory cytokine levels were differentially modulated: the PL group exhibited reductions in interleukin-17A (IL-17A), interleukin-6 (IL-6), and interleukin-1β (IL-1β) by 39.31% (p < 0.01), 17.26% (p < 0.05), and 14.74% (p < 0.05), respectively, whereas the PP group showed decreases of 34.79% (p < 0.05), 29.85% (p < 0.01), and 19.74% (p < 0.05). Micro-computed tomography (Micro-CT) analysis demonstrated that compared to the periodontitis model group (PM), the PL group significantly reduced alveolar bone loss (ABL) by 30.1% (p < 0.05) and increased bone volume fraction (BV/TV) by 49.5% (p < 0.01). In contrast, while the PP group similarly decreased ABL by 32.7% (p < 0.05), it resulted in a 40.4% improvement in BV/TV (p > 0.05). Histological assessments via hematoxylin and eosin (H&E) and tartrate-resistant acid phosphatase (TRAP) staining confirmed that both the PL group and the PP group alleviated structural damage to alveolar bone-supporting tissues and reduced osteoclast-positive cell counts. This study suggests that live L. salivarius CCFM1332 and its postbiotics reduce alveolar bone resorption and attachment loss in rats through antibacterial and anti-inflammatory pathways, thereby alleviating periodontal inflammation in rats. Full article
(This article belongs to the Section Medical Microbiology)
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24 pages, 6608 KB  
Article
The Link Between Left Atrial Longitudinal Reservoir Strain and Mitral Annulus Geometry in Patients with Dilated Cardiomyopathy
by Despina-Manuela Toader, Alina Paraschiv, Diana Ruxandra Hădăreanu, Maria Iovănescu, Oana Mirea, Andreea Vasile and Alina-Craciun Mirescu
Biomedicines 2025, 13(7), 1753; https://doi.org/10.3390/biomedicines13071753 - 17 Jul 2025
Viewed by 432
Abstract
Background/Objectives: Anatomical and functional damage of the mitral valve (MV) apparatus in patients with dilated cardiomyopathy (DCM) is secondary to left ventricular (LV) injury, leading to functional mitral regurgitation (FMR). Real-time four-dimensional echocardiography (RT 4DE) is a useful imaging technique in different [...] Read more.
Background/Objectives: Anatomical and functional damage of the mitral valve (MV) apparatus in patients with dilated cardiomyopathy (DCM) is secondary to left ventricular (LV) injury, leading to functional mitral regurgitation (FMR). Real-time four-dimensional echocardiography (RT 4DE) is a useful imaging technique in different pathologies, including DCM. Left atrial (LA) strain, as measured by left atrium quantification software, is an accurate technique for evaluating increased filling pressure. The MV has a complex three-dimensional morphology and motion. Four-dimensional echocardiography (4DE) has revolutionized clinical imaging of the mitral valve apparatus. This study aims (1) to characterize the mitral annulus (MA) parameters in patients with DCM and advanced-stage heart failure (HF) according to etiology and (2) to find correlations between left atrial function and MA remodeling in this group of patients, using 4DE quantification software. Methods: A total of 82 patients with DCM and an LV ejection fraction ≤ 40% were recruited. Conventional 2DE and RT 4DE were conducted in DCM patients with a compensated phase of HF before discharge. The measured parameters were left atrial reservoir strain (LASr), annular area (AA), annular perimeter (AP), anteroposterior diameter (A-Pd), posteromedial to anterolateral diameter (PM-ALd), commissural distance (CD), interregional distance (ITD), annular height (AH), nonplanar angle (NPA), tenting height (TH), tenting area (TA), and tenting volume (TV). Results: Measured parameters revealed more advanced damage of LA and MA parameters in ischemic compared to nonischemic etiology. Univariate analysis identified AA, AP, A-Pd, PM-ALd, CD, ITD, TH, TA, and TV (p < 0.0001) as determinants of LASr. Including these parameters in a stepwise multivariate logistic regression, PM-ALd (p = 0.03), TH (p = 0.043), and TV (p = 0.0001) were the best predictors of LAsr in these patients. Conclusions: The results of this study revealed the correlation between LA function depression and MA remodeling in patients with DCM. Full article
(This article belongs to the Section Molecular and Translational Medicine)
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20 pages, 5010 KB  
Article
Research on Key Genes for Flowering of Bambusaoldhamii Under Introduced Cultivation Conditions
by Shanwen Ye, Xuhui Wei, Jiamei Chen, Suzhen Luo, Tingguo Jiang, Jie Yang, Rong Zheng and Shuanglin Chen
Genes 2025, 16(7), 811; https://doi.org/10.3390/genes16070811 - 11 Jul 2025
Cited by 1 | Viewed by 468
Abstract
Background: Bambusaoldhamii is an important economic bamboo species. However, flowering occurred after its introduction and cultivation, resulting in damage to the economy of bamboo forests. Currently, the molecular mechanism of flowering induced by introduction stress is still unclear. This study systematically explored the [...] Read more.
Background: Bambusaoldhamii is an important economic bamboo species. However, flowering occurred after its introduction and cultivation, resulting in damage to the economy of bamboo forests. Currently, the molecular mechanism of flowering induced by introduction stress is still unclear. This study systematically explored the key genes and regulatory pathways of flowering in Bambusaoldhamii under introduction stress through field experiments combined with transcriptome sequencing and weighted gene co-expression network analysis (WGCNA), with the aim of providing a basis for flower-resistant cultivation and molecular breeding of bamboo. Results: The study conducted transcriptome sequencing on flowering and non-flowering Bambusaoldhamii bamboo introduced from Youxi, Fujian Province for 2 years, constructed a reference transcriptome containing 213,747 Unigenes, and screened out 36,800–42,980 significantly differentially expressed genes (FDR < 0.05). The results indicated that the photosensitive gene CRY and the temperature response gene COR413-PM were significantly upregulated in the flowering group; the expression level of the heavy metal detoxification gene MT3 increased by 27.77 times, combined with the upregulation of the symbiotic signaling gene NIN. WGCNA analysis showed that the expression level of the flower meristem determination gene AP1/CAL/FUL in the flowering group was 90.38 times that of the control group. Moreover, its expression is regulated by the cascade synergy of CRY-HRE/RAP2-12-COR413-PM signals. Conclusions: This study clarifies for the first time that the stress of introducing Bambusaoldhamii species activates the triad pathways of photo-temperature signal perception (CRY/COR413-PM), heavy metal detoxification (MT3), and symbiotic regulation (NIN), collaboratively driving the AP1/CAL/FUL gene expression network and ultimately triggering the flowering process. Full article
(This article belongs to the Section Genes & Environments)
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19 pages, 2415 KB  
Article
Coupled Effects of Polyethylene Microplastics and Cadmium on Soil–Plant Systems: Impact on Soil Properties and Cadmium Uptake in Lettuce
by Zhiqin Zhang and Boyuan Bi
Toxics 2025, 13(7), 555; https://doi.org/10.3390/toxics13070555 - 30 Jun 2025
Viewed by 1129
Abstract
Microplastics (MPs) and cadmium (Cd) in the soil environment are expected to pose a serious threat to agricultural production. However, the effect of the interaction between them on the soil–plant system and the mechanism of MPs on plant Cd uptake are still unclear. [...] Read more.
Microplastics (MPs) and cadmium (Cd) in the soil environment are expected to pose a serious threat to agricultural production. However, the effect of the interaction between them on the soil–plant system and the mechanism of MPs on plant Cd uptake are still unclear. Therefore, the effects of different concentrations of polyethylene (PE-MPs, 0, 1.0% and 2.0%), alone or combined with Cd, on soil properties, plant growth and Cd uptake were investigated through pot experiments. The results showed that the single contamination of MPs and Cd and their interaction (MPs + Cd) significantly decreased soil moisture and pH; however, it increased soil organic matter (SOM) and total nitrogen (TN). Soil urease and catalase activities were significantly decreased and sucrase and alkaline phosphatase activities were increased with or without Cd addition. The exposure of PE and Cd, alone or combined, significantly and negatively affected plant biomass, photosynthetic parameters, and caused oxidative damage to plants, and the overall toxicity to plants increases with the increase in PE concentration. Moreover, co-pollution causes greater plant toxicity than the individual pollution of PE or Cd. Plants can resist oxidative stress by increasing superoxide dismutase (SOD) and peroxidase (POD) activities. The heat map showed that soil environmental factors were significantly correlated with plant growth; and the results of redundancy analysis (RDA) indicated that for plant physiological characteristics, soil properties under PE, alone or co-contaminated with Cd, explained a total of 85.77% and 97.45%, respectively. This indicated that the alteration of the soil microenvironment is the key factor influencing plant growth. The results of the partial least squares path model (PLS-PM) indicated that plant oxidative damage and biomass had significant positive and negative direct effects on plant Cd uptake, respectively. The linear model of relative importance (%) further revealed in depth that soil moisture (relative importance: 33.60%) and plant biomass (relative importance: 20.23%) were, respectively, regarded as the most important soil environmental factors and plant indicators affecting their Cd uptake. This study provided theoretical support for assessing the risks of MPs and Cd co-pollution to agricultural ecosystems. Full article
(This article belongs to the Section Emerging Contaminants)
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33 pages, 5307 KB  
Article
SiPM Developments for the Time-Of-Propagation Detector of the Belle II Experiment
by Flavio Dal Corso, Jakub Kandra, Roberto Stroili and Ezio Torassa
Sensors 2025, 25(13), 4018; https://doi.org/10.3390/s25134018 - 27 Jun 2025
Viewed by 412
Abstract
Belle II is a particle physics experiment working at an high luminosity collider within a hard irradiation environment. The Time-Of-Propagation detector, aimed at the charged particle identification, surrounds the Belle II tracking detector on the barrel part. This detector is composed by 16 [...] Read more.
Belle II is a particle physics experiment working at an high luminosity collider within a hard irradiation environment. The Time-Of-Propagation detector, aimed at the charged particle identification, surrounds the Belle II tracking detector on the barrel part. This detector is composed by 16 modules, each module contains a finely fused silica bar, coupled to microchannel plate photomultiplier tube (MCP-PMT) photo-detectors and readout by high-speed electronics. The MCP-PMT lifetime at the nominal collider luminosity is about one year, this is due to the high photon background degrading the quantum efficiency of the photocathode. An alternative to these MCP-PMTs is multi-pixel photon counters (MPPC), known as silicon photomultipliers (SiPM). The SiPMs, in comparison to MCP-PMTs, have a lower cost, higher photon detection efficiency and are unaffected by the presence of a magnetic field, but also have a higher dark count rate that rapidly increases with the integrated neutron flux. The dark count rate can be mitigated by annealing the damaged devices and/or operating them at low temperatures. We tested SiPMs, with different dimensions and pixel sizes from different producers, to study their time resolution (the main constraint that has to satisfy the photon detector) and to understand their behavior and tolerance to radiation. For these studies we irradiated the devices to radiation up to 5×10111 MeV neutrons equivalent (neq) per cm2 fluences; we also started studying the effect of annealing on dark count rates. We performed several measurements on these devices, on top of the dark count rate, at different conditions in terms of overvoltage and temperatures. These measurements are: IV-curves, amplitude spectra, time resolution. For the last two measurements we illuminated the devices with a picosecond pulsed laser at very low intensities (with a number of detected photons up to about twenty). We present results mainly on two types of SiPMs. A new SiPM prototype developed in collaboration with FBK with the aim of improving radiation hardness, is expected to be delivered in September 2025. Full article
(This article belongs to the Section Physical Sensors)
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Article
Proton Irradiation and Thermal Restoration of SiPMs for LEO Missions
by Alexis Luszczak, Lucas Finazzi, Leandro Gagliardi, Milagros Moreno, Maria L. Ibarra, Federico Golmar and Gabriel A. Sanca
Instruments 2025, 9(3), 15; https://doi.org/10.3390/instruments9030015 - 26 Jun 2025
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Abstract
Silicon Photomultipliers (SiPMs) are optical sensors widely used in space applications due to their high photon detection efficiency, low power consumption, and robustness. However, in Low Earth Orbit (LEO), their performance degrades over time due to prolonged exposure to ionizing radiation, primarily from [...] Read more.
Silicon Photomultipliers (SiPMs) are optical sensors widely used in space applications due to their high photon detection efficiency, low power consumption, and robustness. However, in Low Earth Orbit (LEO), their performance degrades over time due to prolonged exposure to ionizing radiation, primarily from trapped protons and electrons. The dominant radiation-induced effect in SiPMs is an increase in dark current, which can compromise detector sensitivity. This study investigates the potential of thermal annealing as a mitigation strategy for radiation damage in SiPMs. We designed and tested PCB-integrated heaters to selectively heat irradiated SiPMs and induce recovery processes. A PID-controlled system was developed to stabilize the temperature at 100 °C, and a remotely controlled experimental setup was implemented to operate under irradiation conditions. Two SiPMs were simultaneously irradiated with 9 MeV protons at the EDRA facility, reaching a 1 MeV neutron equivalent cumulative fluence of (9.5 ± 0.2) × 108 cm−2. One sensor underwent thermal annealing between irradiation cycles, while the other served as a control. Throughout the experiment, dark current was continuously monitored using a source measure unit, and I–V curves were recorded before and after irradiation. A recovery of more than 39% was achieved after only 5 min of thermal cycling at 100 °C, supporting this recovery approach as a low-complexity strategy to mitigate radiation-induced damage in space-based SiPM applications and increase device lifetime in harsh environments. Full article
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