Search Results (48)

English walnut (Juglans regia) is a species that is highly valued for the quality of its wood and the nutritional and nutraceutical properties of its fruit. A severe dieback of J. regia trees was observed recently in orchards located in three geographically distinct areas of Tuscany, central Italy. Symptoms included root and collar rot, necrosis of the under-bark tissue, bleeding cankers, stunted growth, and crown dieback. Four Phytophthora species were obtained from 239 isolates found on symptomatic J. regia individuals. They were identified, on the basis of macro-morphological (colony shape and texture), micro-morphometric (shape and size of oogonia, antheridia, oospores, sporangia, and chlamydospores) and molecular (ITS sequencing) characters, as P. gonapodyides, P. cactorum, P. citricola, and P. plurivora. Among these species, P. plurivora was the species isolated with overwhelming frequency from symptomatic tissue and rhizosphere soil, suggesting it to be the putative etiological agent. Pathogenicity assays were conducted on 20 cm long detached J. regia branches for a definitive establishment of disease causation. Severe symptoms (extended necroses) were exhibited by branches infected with P. plurivora, proving its pathogenicity and high virulence on this host. The other Phytophtora species produced negligible necroses around the inoculation site. P. plurivora was recovered from all the investigated orchards, providing evidence that it is quite widespread. This study highlights the growing threat posed by the polyphagous P. plurivora to walnut cultivation and the sustainable business it fuels in Europe, underscoring the need for integrated management strategies to mitigate its economic and ecological impacts. Full article

It has been previously shown that a selenium (Se) nanocomposite (NC) based on the natural polysaccharide arabinogalactan (AG) produced from Siberian larch wood (Larix sibirica Ledeb.), containing 0.000625% of Se, has antibacterial properties against phytopathogens, such as Clavibacter sepedonicus, Pectobacterium carotovorum, and Phytophthora cactorum. The same concentration of Se/AG NC stimulated the growth and development of potato plants in vitro, as well as the formation of their roots, while Se did not accumulate in potato tissues after plant treatment. However, to realize the full potential of Se/AG NC in agriculture for fighting phytopathogens with the aim of developing commercial nanopreparations, additional toxicological studies are needed to fully address their effects. In this study, to assess the environmental risk of using Se/AG NCs, it was applied to a number of bacteria isolated from soil (Escherichia coli, Bacillus cereus, and B. megaterium), water (Micrococcus luteus, B. subtilis, and Sarcina flava), and activated sludge and wastewater of treatment facilities (Serratia marcescens, M. luteus, B. cereus, and Pseudomonas aeruginosa). When studying the antibacterial activity of Se/AG NC against 11 test cultures of bacteria using the agar diffusion method, it was shown that Se/AG NC had a toxic effect only at high concentrations in the range from 40 mg/mL Se/AG NC (1.68 mg/mL Se) to 0.625 mg/mL Se/AG NC (0.026 mg/mL Se) on two types of bacteria M. luteus isolated from the waters of Lake Baikal and B. cereus obtained from activated sludge of treatment facilities. The maximum diameter of the growth inhibition zone of the test cultures after exposure to different concentrations of Se/AG NC was noted for M. luteus (water) and E. coli (soil) at 40 mg/mL − 26.3 and 20.3 mm, respectively. Thus, the negative impact of Se/AG NC on bacteria from different ecological niches was registered only at high concentrations, similar to the predicted concentrations of Se/AG NC in wastewater, which demonstrates the environmental safety of Se/AG NC for use in agriculture. Full article

The production of ornamental plants in Mexico represents a job-generating activity that has grown in recent years; however, it is adversely affected by phytosanitary issues, notably those induced by Phytophthora. Studies of Phytophthora in ornamental nurseries are scarce in Mexico. The aim in this study was to identify Phytophthora species from selected ornamental plant nurseries in Mexico as potential new hosts. Samples of 13 genera diseased plant tissue and soil were collected from eight nurseries in Mexico during 2009–2010. Based on morphology and sequences of ITS rDNA, the 19 isolates obtained were identified as P. cactorum, P. capsici, P. cinnamomi, P. drechsleri, P. kelmanii, P. nicotianae, and P. tropicalis. Additional loci were sequenced to support species determinations within the P. capsici species complex; some of these isolates could not be confirmed as belonging to any described species, and one appeared to be an interspecific hybrid. This is the first report of P. kelmanii in Mexico; this is noteworthy due to being a broad host range, similar to most of the other species encountered. Evidence of nursery-grown plants serving as a Phytophthora vector to a home garden has been reported for the first time in Mexico. Cestrum nocturnum and Solanum ovigerum are new hosts for Phytophthora worldwide. Full article

Plant pathogen zoospores play a vital role in the transmission of several significant plant diseases, with their early detection being important for effective pathogen management. Current methods for pathogen detection involve labour-intensive specimen collection and laboratory testing, lacking real-time feedback capabilities. Methods that can be deployed in the field and remotely addressed are required. In this study, we have developed an innovative zoospore-sensing device by combining a microfluidic sampling system with a microfluidic cytometer and incorporating a chemotactic response as a means to selectively detect motile spores. Spores of Phytophthora cactorum were guided to swim up a detection channel following a gradient of attractant. They were then detected by a transient change in impedance when they passed between a pair of electrodes. Single-zoospore detection was demonstrated with signal-to-noise ratios of ~17 when a carrying flow was used and ~5.9 when the zoospores were induced to swim into the channel following the gradient of the attractants. This work provides an innovative solution for the selective, sensitive and real-time detection of motile zoospores. It has great potential to be further developed into a portable, remotely addressable, low-cost sensing system, offering an important tool for field pathogen real-time detection applications. Full article

The olive tree is one of the most important fruit crops grown in Morocco, yet extensive decline associated with the root rot of this crop has been observed in many regions. This study aimed to identify and characterize the oomycetes associated with root rot disease in olive trees. During the 2021 and 2022 growing seasons, symptomatic root tissues and soil samples were collected for isolation. Based on morphological traits and the sequencing of the internal transcribed spacer (ITS) region of rDNA, 10 oomycete species were identified, belonging to the Phytophthora and Pythium sensu lato (s.l.) genera. Seven species were assigned to Phytophthora, namely, P. palmivora, P. plurivora, P. acerina, P. oleae, P. cactorum, P. gonapodyides, and P. megasperma. The Pythium s.l. genus was represented by three species, including P. schmitthenneri, P. aphanidermatum, and P. irregulare. A pathogenicity assay was conducted by soil infestation to evaluate the effect of these pathogens on one-year-old olive saplings (var. Picholine Marocaine). Results revealed that all 10 species were pathogenic to olive saplings. Inoculated saplings exhibited symptoms, such as root rot, vascular discoloration, and wilting. The pathogens were successfully re-isolated from necrotic roots, thereby fulfilling Koch’s postulates. These findings highlight the complex etiology of root rot disease in olive trees, as multiple species can induce similar symptoms. This study represents the first detailed report of Phytophthora and Pythium s.l. species associated with olive root rot disease in Morocco. Full article

Globally, forests are constantly threatened by a plethora of disturbances of natural and anthropogenic origin, such as climate change, forest fires, urbanization, and pollution. Besides the most common stressors, during the last few years, Portuguese forests have been impacted by severe decline phenomena caused by invasive pathogens, many of which belong to the genus Phytophthora. The genus Phytophthora includes a large number of species that are invading forest ecosystems worldwide, chiefly as a consequence of global trade and human activities. This paper reports the results of a survey of Phytophthora diversity in natural and semi-natural forest ecosystems in Portugal along an elevation gradient. Isolations performed from 138 symptomatic plant tissues and rhizosphere samples collected from 26 plant species yielded a total of 19 Phytophthora species belonging to 6 phylogenetic clades, including P. cinnamomi (36 isolates), P. multivora (20), P. plurivora (9), P. cactorum (8), P. lacustris (8), P. pseudocryptogea (8), P. amnicola (6), P. hedraiandra (6), P. pseudosyringae (5), P. thermophila (5), P. bilorbang (4), P. inundata (4), P. asparagi (3), P. citricola (3), P. gonapodyides (3), P. rosacearum (3), P. chlamydospora (2), P. pachypleura (2), and P. syringae (1). Overall, the data obtained highlight the widespread occurrence of P. cinnamomi in natural ecosystems from sea level to mountain habitats. The results of the pathogenicity tests carried out on 2-year-old chestnut plants confirmed the key role of P. cinnamomi in the recrudescence of chestnut ink disease and the additional risk posed by P. pachypleura, P. plurivora, and P. multivora to Portuguese chestnut forests. Finally, three species, P. citricola, P. hedraiandra, and P. pachypleura, are reported for the first time in the natural ecosystems of Portugal. Full article

Evidence of unintended introductions of Phytophthora species into native habitats has become increasingly prevalent in California. If not managed adequately, Phytophthora species can become devastating agricultural and forest plant pathogens. Additionally, California’s natural areas, characterized by a Mediterranean climate and dominated by chaparral (evergreen, drought-tolerant shrubs) and oak woodlands, lack sufficient baseline knowledge on Phytophthora biology and ecology, hindering effective management efforts. From 2018 to 2021, soil samples were collected from Angeles National Forest lands (Los Angeles County) with the objective of better understanding the diversity and distribution of Phytophthora species in Southern California. Forty sites were surveyed, and soil samples were taken from plant rhizospheres, riverbeds, and off-road vehicle tracks in chaparral and oak woodland areas. From these surveys, fourteen species of Phytophthora were detected, including P. cactorum (subclade 1a), P. multivora (subclade 2c), P. sp. cadmea (subclade 7a), P. taxon ‘oakpath’ (subclade 8e, first reported in this study), and several clade-6 species, including P. crassamura. Phytophthora species detected in rhizosphere soil were found underneath both symptomatic and asymptomatic plants and were most frequently associated with Salvia mellifera, Quercus agrifolia, and Salix sp. Phytophthora species were present in both chaparral and oak woodland areas and primarily in riparian areas, including detections in off-road tracks, trails, and riverbeds. Although these Mediterranean ecosystems are among the driest and most fire-prone areas in the United States, they harbor a large diversity of Phytophthora species, indicating a potential risk for disease for native Californian vegetation. Full article

The Netherlands is one of the most important countries for the production of strawberry transplants in Europe. Regulations for pesticide use and water quality become more strict each year, which is a challenge for this sector. Strawberry plants are grown from tips and raised in trays on a trayfield. One of the main plant diseases in strawberry is caused by Phytophthora cactorum. The dispersal of the disease is facilitated by sporangia and zoospores splashing from the surface of the trayfield onto the transplants in the trays. In this research, we compared, in three consecutive years, the traditional growing system with a new system in which the trays are elevated and splashes from the trayfield reaching the transplants are minimized. In two of the three years, we show that the new growing system without the use of any fungicide against P. cactorum performs as well as or even better than the traditional system with the use of the permitted pesticides. Data about Phytophthora occurring in air samples and in splash water collected at different heights support the hypothesis that the decrease in splash dispersal underlies the success of the elevated trayfield. This shows the potential of re-designing growing systems to become less dependent on pesticide use. Full article

In this paper, Panax ginseng cyclophilin (PgCyP) was successfully obtained through a genetic engineering technique. A bioinformatics method was used to analyze the physicochemical properties and structure of PgCyP. The results showed that PgCyP belongs to the cyclophilin gene family. The protein encoded by the PgCyP gene contains the active site of PPIase (R62, F67, and H133) and a binding site for cyclosporine A (W128). The relative molecular weight of PgCyP is 187.11 bp; its theoretical isoelectric point is 7.67, and it encodes 174 amino acids. The promoter region of PgCyP mainly contains the low-temperature environmental stress response (LTR) element, abscisic acid-responsive cis-acting element (ABRE), and light-responsive cis-acting element (G-Box). PgCyP includes a total of nine phosphorylation sites, comprising four serine phosphorylation sites, three threonine phosphorylation sites, and two tyrosine phosphorylation sites. PgCyP was recombined and expressed in vitro, and its recombinant expression was investigated. Furthermore, it was found that the recombinant PgCyP protein could effectively inhibit the germination of Phytophthora cactorum spores and the normal growth of Phytophthora cactorum mycelia in vitro. Further experiments on the roots of susceptible Arabidopsis thaliana showed that the PgCyP protein could improve the resistance of arabidopsis to Phytophthora cactorum. The findings of this study provide a basis for the use of the PgCyP protein as a new type of green biopesticide. Full article

Studies of Phytophthora impact in forests generally focus on individual species without recognition that Phytophthora occur in multispecies communities. This study investigated community structure of Phytophthora species in the rhizosphere of Agathis australis (kauri) in Te Wao Nui o Tiriwa/Waitākere Ranges, New Zealand, in the context of kauri dieback disease expression. Soil sampling and tree monitoring were conducted on 767 randomly selected mature kauri trees. Phytophthora species were detected using both soil baiting and DNA metabarcoding of environmental DNA (eDNA). Four species were detected with soil baiting (P. agathidicida, P. cinnamomi, P. multivora, and P. pseudocryptogea/P. cryptogea) and an additional three species with metabarcoding (P. kernoviae, P. cactorum/P. aleatoria and an unknown clade 7 species). Phytophthora cinnamomi was the most abundant species and was distributed throughout the forest. Both P. multivora and P. agathidicida were limited to forest edges, suggesting more recent introductions. P. agathidicida presence was strongly correlated with declining canopy health, confirming its role as the main driver of kauri dieback. The limited distribution of P. agathidicida and infrequent detections (11.0% samples) suggests that that this species is spreading as an introduced invasive pathogen and provide hope that with strategic management (including track upgrades and closures, restricting access to uninfected areas, and continual monitoring) uninfected areas of the forest can be protected. The frequent detections of P. cinnamomi and P. multivora from symptomatic trees in the absence of P. agathidicida suggest more research is needed to understand their roles in kauri forest health. Full article

Curcuma longa, known for its anti-inflammatory, antioxidant, and antimicrobial properties, has been a staple in traditional medicine for centuries. In the pursuit of natural alternatives to synthetic preservatives, the extracts of C. longa have garnered attention for their efficacy in extending shelf life and preventing the spoilage of diverse agricultural products. This study aims to assess the antifungal and antioomycete activities and plant protection capabilities of a hydroethanolic C. longa extract as a natural product against crop pathogens. The phytochemical profile of the C. longa extract was elucidated through gas chromatography-mass spectrometry. The extract exhibited a richness in bisabolene sesquiterpenoids, notably (+)-β-turmerone, α-turmerone, (+)-(S)-ar-turmerone, and included minor phytoconstituents, such as α-atlantone, γ-curcumene, zingiberene, isoelemicin, and gibberellin A3. Radial growth inhibition assays demonstrated the C. longa extract’s effectiveness against various phytopathogenic fungi, including Botrytis cinerea, Colletotrichum acutatum, and Diplodia corticola, as well as the oomycetes Phytophthora cactorum and Phytophthora cinnamomi. In ex situ tests, the C. longa extract demonstrated remarkable protection capabilities for Malus domestica excised stems against P. cinnamomi-induced necrosis. Furthermore, the C. longa extract exhibited non-toxicity towards lettuce seed germination and did not impact early lettuce seedling growth, indicating its safety for crop protection. These findings contribute to expanding the potential applications of C. longa as an antimicrobial agent, particularly for safeguarding economically significant trees against the destructive oomycete P. cinnamomi. Full article

Extensive collar rot, sunken and bleeding cankers, shoot blight, and fruit rot symptoms on olive trees have recently been observed in several orchards in Italy. Since there is little information about the etiology of these diseases and given the high economic relevance of this iconic crop, a study was conducted from autumn 2017 to summer 2022, in four Italian regions, to define the occurrence, distribution and impact of the main pathogens involved. A total of 1064 symptomatic olive samples were collected and processed. Based on colony appearance, micromorphological analysis and DNA sequence data, thirty-eight species, including eighteen Botryosphaeriaceae species belonging to five genera and fifteen Phytophthora species, were isolated and identified, thirteen of which, Diplodia africana, D. fraxini, D. subglobosa, Dothiorella omnivora, Do. sarmentorum, Do. sempervirentis, Sardiniella urbana (Botryosphaeriaceae), Phytophthora cactorum, P. cinnamomi, P. citricola, P. crassamura, P. niederhauserii and P. pseudocryptogea, are reported here for the first time in olive trees. Pathogenicity tests performed on unripe drupes and on potted olive seedlings completed Koch postulates and highlighted that several species of Botryosphaeriaceae and Phytophthora represent a growing threat to olive trees. Full article

New and emerging Phytophthora-related diseases in small trees, shrubs and herbaceous plants typical of subalpine vegetation have recently been observed in Italy and Slovenia. Diseased plants showed a complex symptomatology including foliar necrosis, fruit rot, shoot blight and branch bleeding cankers. Since little information is available about the aetiology of these aerial Phytophthora diseases, from 2019 to 2022, field surveys were conducted in 54 sites to define the occurrence, distribution and impact of the Phytophthora species on mountain vegetation. A total of 360 Phytophthora isolates were obtained from 397 samples collected from 33 herbaceous and woody host species. Based on phylogenetic analysis and morphometric data, 17 Phytophthora species were identified: P. pseudosyringae (201 isolates), P. plurivora (54), P. gonapodyides (21), P. ilicis (20), P. alpina (17), P. acerina (11), P. cactorum (7), P. pseudocryptogea (6), P. cambivora (5), P. idaei (4), P. psychrophila (3), P. bilorbang (2), P. chlamydospora (2), P. hedraiandra (1), P. kelmanii (1), P. rosacearum (1) and P. syringae (1). In addition, three isolates of a new putative Phytophthora species obtained from Alnus viridis, Juniperus communis and Rhododendron ferrugineum are described here as Phytophthora pseudogregata sp. nov. Overall, the results highlighted an unexpectedly high diversity of Phytophthora species in mountain areas, with many species able to cause aerial infections due to the production of caducous sporangia. Full article

Crown rot, caused by Phytophthora cactorum, is a devastating disease of strawberry. While most commercial octoploid strawberry cultivars (Fragaria × ananassa Duch) are generally susceptible, the diploid species Fragaria vesca is a potential source of resistance genes to P. cactorum. We previously reported several F. vesca genotypes with varying degrees of resistance to P. cactorum. To gain insights into the strawberry defence mechanisms, comparative transcriptome profiles of two resistant genotypes (NCGR1603 and Bukammen) and a susceptible genotype (NCGR1218) of F. vesca were analysed by RNA-Seq after wounding and subsequent inoculation with P. cactorum. Differential gene expression analysis identified several defence-related genes that are highly expressed in the resistant genotypes relative to the susceptible genotype in response to P. cactorum after wounding. These included putative disease resistance (R) genes encoding receptor-like proteins, receptor-like kinases, nucleotide-binding sites, leucine-rich repeat proteins, RPW8-type disease resistance proteins, and ‘pathogenesis-related protein 1’. Seven of these R-genes were expressed only in the resistant genotypes and not in the susceptible genotype, and these appeared to be present only in the genomes of the resistant genotypes, as confirmed by PCR analysis. We previously reported a single major gene locus RPc-1 (Resistance to Phytophthora cactorum 1) in F. vesca that contributed resistance to P. cactorum. Here, we report that 4–5% of the genes (35–38 of ca 800 genes) in the RPc-1 locus are differentially expressed in the resistant genotypes compared to the susceptible genotype after inoculation with P. cactorum. In particular, we identified three defence-related genes encoding wall-associated receptor-like kinase 3, receptor-like protein 12, and non-specific lipid-transfer protein 1-like that were highly expressed in the resistant genotypes compared to the susceptible one. The present study reports several novel candidate disease resistance genes that warrant further investigation for their role in plant defence against P. cactorum. Full article

The phytopathogen Phytophthora parasitica, from the Oomycetes class, known to be the tobacco black shank agent, can induce devastating diseases in various crop, plant and forest ecosystems. The genus Phytophthora has been studied at the cellular level, suggesting that different developmental steps are induced by the expression of some specific genes. However, these studies have only been carried out on certain species, such as Phytophthora infestans and Phytophthora cactorum. As for Phytophthora parasitica, which can be considered as one of the top ten oomycete pathogens due to the economic impact and effect it has on food security, even less functional analyses and transcriptomics data are available. To date, little is known about the protein expression of Phytophthora parasitica, information that is essential for achieving a better understanding of this species. In this study, we aimed to gain insight into the proteomics of the mycelium of the Phytophthora parasitica strain INRA 310 by addressing the following questions: (i) how many predicted proteins can be detected on the mycelium of P. parasitica INRA 310, and (ii) what proteins can be detected? The proteomics experiments were performed on the mycelium of the strain Phytophthora parasitica INRA310, using the nanoliquid chromatography-MS/MS technique. A total of 219 proteins were identified, including ten unknown proteins and 209 proteins involved in lipid, carbohydrate, nucleotide, energy production and other metabolic pathways. This proteomics study is, to our knowledge, the first to be performed on the mycelium of Phytophthora parasitica INRA 310. It gives a brief first insight into its in vitro-expressed proteins. This work may be the first step before further, more comprehensive studies are undertaken with the aim of better understanding the biology of this species and its pathogenicity. Full article