Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (26)

Search Parameters:
Keywords = ammonia tunnel

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
16 pages, 5067 KB  
Article
Modeling of Water Quality in Deep Tunnels Coupling Temperature–Depth Effects
by Xiaomei Zhang, Qingmin Zhang, Yuanjing Yang, Yuntao Guan and Rui Chen
Appl. Sci. 2026, 16(8), 3664; https://doi.org/10.3390/app16083664 - 9 Apr 2026
Viewed by 282
Abstract
As large-scale underground storage infrastructure, deep tunnels exhibit distinct water quality dynamics driven by ground temperature gradients. Currently, there is limited investigation into water quality modeling for deep tunnel systems. Unraveling the correlation between temperature–depth gradients and water quality evolution is crucial for [...] Read more.
As large-scale underground storage infrastructure, deep tunnels exhibit distinct water quality dynamics driven by ground temperature gradients. Currently, there is limited investigation into water quality modeling for deep tunnel systems. Unraveling the correlation between temperature–depth gradients and water quality evolution is crucial for the operation and management of such systems. In this study, field experiments were carried out in the Qianhai–Nanshan Deep Tunnel to investigate complex water quality behavior, leading to the development of chemical oxygen demand (COD) and ammonia nitrogen (NH3–N) models that incorporate temporal variation, temperature, and burial depth. Results indicate that temperature is the dominant factor influencing water quality in deep tunnel storage. Increased ground temperature promotes the degradation and mass transport of pollutants within the tunnel system. Owing to temperature–depth effects, the deeply buried Qianhai tunnel significantly reduces river discharge pollution after water storage, with COD and NH3–N removal rates reaching 74.9% and 26.8%, respectively. Temperature-controlled experiments showed that COD and NH3–N reduction rates varied between 60–94% and 10–30% across a temperature range of 20–34 °C. The proposed model was validated against experimental data, achieving Nash–Sutcliffe efficiency coefficients of 0.7–0.8. This study provides a methodological foundation for simulating complex aquatic environments and offers a decision-support tool for optimizing the operational strategies of deep tunnel systems. However, the model’s current generalization capability is constrained by the limited experimental conditions (20–34 °C, 12 days) and the lack of experimental replicates, which should be systematically addressed in future studies. Full article
(This article belongs to the Special Issue Environmental Issues in Geotechnical Engineering)
Show Figures

Figure 1

23 pages, 6837 KB  
Article
Digestate Application on Grassland: Effects of Application Method and Rate on GHG Emissions and Forage Performance
by Petr Šařec, Václav Novák, Oldřich Látal, Martin Dědina and Jaroslav Korba
Agronomy 2025, 15(5), 1243; https://doi.org/10.3390/agronomy15051243 - 20 May 2025
Cited by 7 | Viewed by 1809 | Correction
Abstract
The application of digestate as a fertilizer offers a promising alternative to synthetic inputs on permanent grasslands, with benefits for productivity and environmental performance. This four-year study evaluated the impact of two digestate application methods—disc injection (I) and band spreading (S)—combined with four [...] Read more.
The application of digestate as a fertilizer offers a promising alternative to synthetic inputs on permanent grasslands, with benefits for productivity and environmental performance. This four-year study evaluated the impact of two digestate application methods—disc injection (I) and band spreading (S)—combined with four dose variants (0, 20, 40, and 80 m3·ha−1), including split-dose strategies. Emissions of ammonia (NH3), carbon dioxide (CO2), and methane (CH4) were measured using wind tunnel systems immediately after application. Vegetation status was assessed via Sentinel-2-derived Normalized Difference Vegetation Index, Normalized Difference Water Index, and Modified Soil Adjusted Vegetation Index, and agronomic performance through dry matter yield (DMY), net energy for lactation (NEL), and relative feed value (RFV). NH3 and CO2 emissions increased proportionally with digestate dose, while CH4 responses suggested a threshold effect, but considering solely the disc injection, CH4 flux did not increase markedly with higher application rates. Disc injection resulted in significantly lower emissions of the monitored fluxes than band spreading. The split-dose I_40+40 variant achieved the highest DMY (3.57 t·ha−1) and improved forage quality, as indicated by higher NEL values. The control variant (C, no fertilization) had the lowest yield and NEL. These results confirm that subsurface digestate incorporation in split doses can reduce emissions while supporting yield and forage quality. Based on the findings, disc injection at 40+40 m3·ha−1 is recommended as an effective option for reducing emissions and maintaining productivity in managed grasslands. Full article
(This article belongs to the Section Grassland and Pasture Science)
Show Figures

Figure 1

14 pages, 8469 KB  
Article
Application of NACA 6412 Airfoil for Noise and Vibration Reduction in Evaporator Fan Blades
by Aytaç Moralar and Serhat Ekim
Processes 2024, 12(11), 2377; https://doi.org/10.3390/pr12112377 - 29 Oct 2024
Cited by 1 | Viewed by 3705
Abstract
In today’s industry, due to the importance placed on occupational health and safety, regulations are being implemented to reduce noise in factory conditions. This study aims to reduce fan noise levels while simultaneously enhancing fan efficiency. We focused specifically on the evaporator fans [...] Read more.
In today’s industry, due to the importance placed on occupational health and safety, regulations are being implemented to reduce noise in factory conditions. This study aims to reduce fan noise levels while simultaneously enhancing fan efficiency. We focused specifically on the evaporator fans used in the ammonia refrigeration tunnels at Unilever’s Algida ice cream production facility. Both physical and computational models of the fan blades were developed using Fluent and Phoenics computational fluid dynamics (CFD) software. Vibration analyses of the fan blades were performed using the modal analysis module. Through the analysis of pressure distributions on the existing fan blades, it was found that aerodynamic irregularities were the primary contributors to the noise. To address this, the NACA 6412 airfoil model was selected for the redesign, resulting in balanced pressure distribution across the blade surfaces and a reduction in noise levels from 96 dB to 78 dB. Full article
(This article belongs to the Topic Modern Technologies and Manufacturing Systems, 2nd Volume)
Show Figures

Figure 1

13 pages, 2652 KB  
Article
Low Bacterial Diversity and Nitrate Levels in Cores from Deep Boreholes in Pristine Karst
by Janez Mulec, Sara Skok and Lejla Pašić
Life 2024, 14(6), 677; https://doi.org/10.3390/life14060677 - 24 May 2024
Cited by 3 | Viewed by 1558
Abstract
This study investigates the nitrate gradients within the deep biosphere of karst carbonate rocks and their resident microbiota. Samples were taken from borehole cores at depths down to 350 m below the surface, collected during geological site investigations for proposed railway tunnels and [...] Read more.
This study investigates the nitrate gradients within the deep biosphere of karst carbonate rocks and their resident microbiota. Samples were taken from borehole cores at depths down to 350 m below the surface, collected during geological site investigations for proposed railway tunnels and analysed using 16S rRNA amplicon sequencing. 16S rRNA amplicon sequencing analysis revealed relatively low microbial diversity, which can serve as a reliable indicator of the pristine nature of deep karst. However, some local hotspots of diversity are independent of depth. Pseudomonadota dominated the samples, with Gammaproteobacteria dominating at the class level. The low nitrate content in deep karst, in contrast to higher values closer to the surface, serves as an additional marker of its undisturbed and unpolluted status. Based on the prediction of functional profiles from 16S rRNA sequencing data, nitrates remain low due to indigenous microbial denitrification and assimilatory nitrate reduction. Pathways related to nitrogen fixation, ammonia assimilation, and nitrification were not confirmed. When elevated nitrate levels are observed in karst, they are most probably related to anthropogenic activities. Environmental factors other than depth and nitrate content play an important role in shaping bacterial communities. Full article
(This article belongs to the Topic Extreme Environments: Microbial and Biochemical Diversity)
Show Figures

Figure 1

21 pages, 4650 KB  
Article
Measurement of Light-Duty Vehicle Exhaust Emissions with Light Absorption Spectrometers
by Barouch Giechaskiel, Anastasios Melas, Jacopo Franzetti, Victor Valverde, Michaël Clairotte and Ricardo Suarez-Bertoa
Technologies 2024, 12(3), 32; https://doi.org/10.3390/technologies12030032 - 28 Feb 2024
Cited by 6 | Viewed by 4380
Abstract
Light-duty vehicle emission regulations worldwide set limits for the following gaseous pollutants: carbon monoxide (CO), nitric oxides (NOX), hydrocarbons (HCs), and/or non-methane hydrocarbons (NMHCs). Carbon dioxide (CO2) is indirectly limited by fleet CO2 or fuel consumption targets. Measurements [...] Read more.
Light-duty vehicle emission regulations worldwide set limits for the following gaseous pollutants: carbon monoxide (CO), nitric oxides (NOX), hydrocarbons (HCs), and/or non-methane hydrocarbons (NMHCs). Carbon dioxide (CO2) is indirectly limited by fleet CO2 or fuel consumption targets. Measurements are carried out at the dilution tunnel with “standard” laboratory-grade instruments following well-defined principles of operation: non-dispersive infrared (NDIR) analyzers for CO and CO2, flame ionization detectors (FIDs) for hydrocarbons, and chemiluminescence analyzers (CLAs) or non-dispersive ultraviolet detectors (NDUVs) for NOX. In the United States in 2012 and in China in 2020, with Stage 6, nitrous oxide (N2O) was also included. Brazil is phasing in NH3 in its regulation. Alternative instruments that can measure some or all these pollutants include Fourier transform infrared (FTIR)- and laser absorption spectroscopy (LAS)-based instruments. In the second category, quantum cascade laser (QCL) spectroscopy in the mid-infrared area or laser diode spectroscopy (LDS) in the near-infrared area, such as tunable diode laser absorption spectroscopy (TDLAS), are included. According to current regulations and technical specifications, NH3 is the only component that has to be measured at the tailpipe to avoid ammonia losses due to its hydrophilic properties and adsorption on the transfer lines. There are not many studies that have evaluated such instruments, in particular those for “non-regulated” worldwide pollutants. For this reason, we compared laboratory-grade “standard” analyzers with FTIR- and TDLAS-based instruments measuring NH3. One diesel and two gasoline vehicles at different ambient temperatures and with different test cycles produced emissions in a wide range. In general, the agreement among the instruments was very good (in most cases, within ±10%), confirming their suitability for the measurement of pollutants. Full article
(This article belongs to the Section Environmental Technology)
Show Figures

Figure 1

17 pages, 10331 KB  
Article
Digestate Application Methods and Rates with Regard to Greenhouse Gas Emissions and Crop Conditions
by Jaroslav Korba, Petr Šařec, Václav Novák, Pavel Brož, Antonín Dolan and Martin Dědina
Agronomy 2024, 14(2), 336; https://doi.org/10.3390/agronomy14020336 - 6 Feb 2024
Cited by 10 | Viewed by 5161
Abstract
Digestate is commonly used as a liquid organic fertilizer, as it contains nutrients that are important for plant growth and thus help reduce usage of mineral fertilizers. Since the digestate application leads to the release of greenhouse gases (GHGs) into the atmosphere, it [...] Read more.
Digestate is commonly used as a liquid organic fertilizer, as it contains nutrients that are important for plant growth and thus help reduce usage of mineral fertilizers. Since the digestate application leads to the release of greenhouse gases (GHGs) into the atmosphere, it is necessary to find a suitable application method and fertilizer rate with minimal gas emissions while providing sufficient nutrients to crops. The aim of this study was to investigate the relationship between selected GHGs and ammonia (NH3) release into the atmosphere and different rates of digestate applied, i.e., 0, 10, 20, 30, and 40 m3 ha−1. Two digestate incorporation methods were used, i.e., a disc application unit (D) and strip-till (S). The fluxes, i.e., methane (CH4), ammonia, and carbon dioxide (CO2), were monitored using the wind tunnel method. Crop growth and potential nutrient utilization by silage maize were assessed through stand condition monitoring by the Normalized Difference Vegetation Index (NDVI) and the Normalized Difference Water Index (NDWI) using remote sensing. Under the given conditions, the digestate rates and the compared application methods had significant effects on the level of fluxes. The rate of digestate was confirmed to affect the yield of silage maize. The yield increased by more than 8% when using the disc applicator. Based on our results, it is advisable to apply digestate by strip-till technology at rates of approximately 20 m3 ha−1. Full article
(This article belongs to the Section Soil and Plant Nutrition)
Show Figures

Figure 1

16 pages, 2394 KB  
Article
Ammonia Emissions from Cattle Manure under Variable Moisture Exchange between the Manure and the Environment
by Rolandas Bleizgys and Vilma Naujokienė
Agronomy 2023, 13(6), 1555; https://doi.org/10.3390/agronomy13061555 - 5 Jun 2023
Cited by 9 | Viewed by 6277
Abstract
When reducing ammonia emissions from cowsheds, it is recommended to reduce the ventilation intensity, air temperature in the barn, manure moisture by using bedding and manure-contaminated surfaces, and to prevent urine from accumulating in the airways. Using the mass flow method in the [...] Read more.
When reducing ammonia emissions from cowsheds, it is recommended to reduce the ventilation intensity, air temperature in the barn, manure moisture by using bedding and manure-contaminated surfaces, and to prevent urine from accumulating in the airways. Using the mass flow method in the wind tunnel, after research on seven types of cattle manure with different moisture contents, it was found that ammonia evaporates up to 3.9 times more intensively from liquid manure than from solid manure. There is a strong correlation between ammonia and water evaporation from manure. Ammonia emission from liquid manure decrease by 2.0–2.3 times, emissions from solid manure decrease by 1.9–2.1 times. Different cowsheds have different opportunities to reduce air pollution and conditions for manure to dry and crusts to form on the surface. The best results will be achieved by applying complex measures to reduce air pollution. Full article
(This article belongs to the Special Issue Agricultural Automation and Innovative Agricultural Systems)
Show Figures

Figure 1

15 pages, 5058 KB  
Article
Computational Fluid Dynamics Modeling of Ammonia Concentration in a Commercial Broiler Building
by João C. Gonçalves, António M. G. Lopes and José L. S. Pereira
Agriculture 2023, 13(5), 1101; https://doi.org/10.3390/agriculture13051101 - 21 May 2023
Cited by 4 | Viewed by 2675
Abstract
In the present study, a numerical model was developed to predict the flow pattern inside a broiler building. The model was intended to predict the velocity fields inside the domain and the ammonia (NH3) emitted or released by litter from poultry [...] Read more.
In the present study, a numerical model was developed to predict the flow pattern inside a broiler building. The model was intended to predict the velocity fields inside the domain and the ammonia (NH3) emitted or released by litter from poultry housing. The numerical model was developed in computational fluid dynamics (CFDs) commercial code and intended to represent a commercial broiler building and to simulate the 3D and heat transfer in steady-state flow. The evaporative cooling pads were also included in the model. The validation of the model was based on experimental measurements obtained in previous studies. The simulations were focused on the summer, winter, and mid-season conditions. Numerical measurements of NH3 concentration were compared with the experimental measurements, and a quite good agreement was verified. The numerical results allowed the characterization of: the inside flow pattern developed for the summer and winter periods and the NH3 and velocity field distributions inside the broiler building. It was found that NH3 concentration increased along the tunnel, as a result, especially, of the low flow rate of the exhaust fan. It was verified that the low velocities inside domain were not sufficient to remove the gaseous pollutants. Full article
(This article belongs to the Section Farm Animal Production)
Show Figures

Figure 1

23 pages, 5527 KB  
Article
STM/STS Study of the Density of States and Contrast Behavior at the Boundary between (7 × 7)N and (8 × 8) Structures in the SiN/Si(111) System
by Vladimir Mansurov, Timur Malin, Sergey Teys, Victor Atuchin, Denis Milakhin and Konstantin Zhuravlev
Crystals 2022, 12(12), 1707; https://doi.org/10.3390/cryst12121707 - 24 Nov 2022
Cited by 10 | Viewed by 5427
Abstract
The origin of the contrast appearing in STM images at the boundary between diverse ordered structures is studied using the example of two structures, (7 × 7)N and (8 × 8), formed in the system of a two-dimensional silicon nitride layer on [...] Read more.
The origin of the contrast appearing in STM images at the boundary between diverse ordered structures is studied using the example of two structures, (7 × 7)N and (8 × 8), formed in the system of a two-dimensional silicon nitride layer on the Si(111) surface during ammonia nitridation. A significant dependence of the contrast between these structures on the voltage applied to the tunnel gap was found and studied both experimentally and theoretically. Variations in the contrast were quantitatively studied in the range from −3 V to +3 V, and they were studied in more detail for the positive biases on the sample from +1 V to +2.5 V, where the contrast was changed more than 2 times. Within the one-dimensional Wentzel–Kramers–Brillouin (WKB) model for the tunnel current, a comparatively simple procedure is proposed for the correction of the experimental STS-spectra of differential conductivity to identify the adequate (feasible) density of electron states (DOS). It is shown that the (8 × 8) structure DOS corresponds to a graphene-like layer of silicon nitride structure. The proposed correction procedure of the empirical differential conductivity spectra measured by STS will be useful for the quantitative determination of the DOS of new two-dimensional materials and surface structures. Full article
(This article belongs to the Special Issue Advanced Research in Semiconductor Materials and Devices)
Show Figures

Figure 1

11 pages, 3649 KB  
Article
Use of Bio-Preparations to Reduce Ammonia Emissions from Cattle Farming: Effects of Manure Storage Time and Ventilation Intensity
by Reda Mažeikienė and Rolandas Bleizgys
Agriculture 2022, 12(10), 1626; https://doi.org/10.3390/agriculture12101626 - 6 Oct 2022
Cited by 3 | Viewed by 3124
Abstract
Ammonia emissions are both an environmental and health issue. Biological preparations (also known as biopreparations) have attracted interests as a tool to reduce ammonia emissions from livestock. However, little is known about their effectiveness in modulating evaporating NH3 from manure. The aim [...] Read more.
Ammonia emissions are both an environmental and health issue. Biological preparations (also known as biopreparations) have attracted interests as a tool to reduce ammonia emissions from livestock. However, little is known about their effectiveness in modulating evaporating NH3 from manure. The aim of this study was to evaluate the effectiveness of one biopreparation product (MycroZyme© Micron Bio-Systems Ltd., Bridgwater, UK) by studying the dynamics of NH3 gas evolution, taking into account factors such as manure storage time (fresh or stored) and the application method (sprayed or mixed). Experimental studies were performed with control manure (manure without biopreparation) and manure treated with the biopreparation. Data showed that the use of biopreparation slowed down the ammonia emission from manure, so the ammonia concentration in the wind tunnel decreased on average from 21.69 ± 0.9 to 14.43 ± 1.5 ppm. The effect of the biopreparation on ammonia evaporation was higher in the presence of more intensive ammonia emission conditions; i.e., when the manure was fresh, there was no crust on the surface, and the airflow over the manure was intense, and there was a large gradient of ammonia concentration on the manure surface. Based on the obtained results, recommendations were made to reduce ammonia emissions in litter-less cowsheds, where liquid manure is stored. Full article
(This article belongs to the Special Issue Agricultural Environmental Pollution, Risk Assessment, and Control)
Show Figures

Figure 1

25 pages, 7148 KB  
Article
Development and Validation of an Energy Consumption Model for Animal Houses Achieving Precision Livestock Farming
by Longhuan Du, Li Yang, Chaowu Yang, Chenming Hu, Chunlin Yu, Mohan Qiu, Siyang Liu, Shiliang Zhu and Xianlin Ye
Animals 2022, 12(19), 2580; https://doi.org/10.3390/ani12192580 - 27 Sep 2022
Cited by 13 | Viewed by 2909
Abstract
Indoor environmental control is usually applied in poultry farming to ensure optimum growth conditions for birds. However, these control methods represent a considerable share of total energy consumption, and the trend of applying new equipment in the future for precision livestock farming would [...] Read more.
Indoor environmental control is usually applied in poultry farming to ensure optimum growth conditions for birds. However, these control methods represent a considerable share of total energy consumption, and the trend of applying new equipment in the future for precision livestock farming would further increase energy demand, resulting in an increase in greenhouse gas emissions and management costs. Therefore, to ensure optimum efficiency of both energy use and livestock productivity, a customized hourly model was developed in the present study to interpret and analyze the electronically collected data. The modules for estimating indoor gas concentrations were incorporated into the present model, as this has not been properly considered in previous studies. A validation test was performed in a manure-belt layer house using sensors and meters to measure the indoor environmental parameters and energy consumption. The predicted results, including indoor temperature, relative humidity, carbon dioxide and ammonia concentrations, showed good agreement with the measured data, indicating a similar overall trend with acceptable discrepancies. Moreover, the corresponding differences between the measured and simulated energy consumption for heating, tunnel ventilation and base ventilation were 13.7, 7.5, and 0.1%, respectively. The total energy demand estimated by the model showed a limited discrepancy of approximately 10.6% compared with that measured in reality. Although human factors, including inspection, cleaning, vaccination, etc., were not included in the model, the validation results still suggested that the customized model was able to accurately predict the indoor environment and overall energy consumption during poultry farming. The validated model provides a tool for poultry producers to optimize production planning and management strategies, increase the production rate of unit energy consumption and achieve precision livestock farming from an energy consumption standpoint. Full article
(This article belongs to the Special Issue Rethinking Animal Production through Precision Livestock Farming)
Show Figures

Figure 1

13 pages, 3796 KB  
Article
Titania Thin Film Coated Glass for Simultaneous Ammonia Degradation and UV Light Blocking Layer in Photovoltaics
by Krunoslav Juraić, Mario Bohač, Jasper Rikkert Plaisier, Aden Hodzic, Pavo Dubček, Davor Gracin, Ivana Grčić, Jan Marčec, Tihana Čižmar and Andreja Gajović
Sustainability 2022, 14(17), 10970; https://doi.org/10.3390/su141710970 - 2 Sep 2022
Cited by 3 | Viewed by 2584
Abstract
In this work, we have investigated the potential dual application of TiO2 thin films as a photocatalyst for ammonia degradation, and as a UV light blocking layer in c-Si photovoltaics. For this purpose, we deposited a series of TiO2 thin films [...] Read more.
In this work, we have investigated the potential dual application of TiO2 thin films as a photocatalyst for ammonia degradation, and as a UV light blocking layer in c-Si photovoltaics. For this purpose, we deposited a series of TiO2 thin films on a glass substrate by reactive magnetron sputtering and analysed the influence of the deposition parameters (O2/Ar working gas content and pressure) on the structural, optical and photocatalytic properties. All samples are nanocrystalline anatase TiO2 and have a uniform surface (RMS roughness < 5 nm) in a wide range of magnetron sputtering deposition parameters. They are transparent in the Vis/NIR spectral range and strongly absorb light in the UV range above the optical bandgap energy (3.3 eV), which makes them suitable for the use as UV blocking layers and photocatalysts. The photocatalytic properties were studied in a mini-photocatalytic wind tunnel reactor by examining ammonia degradation. A kinetic study was performed to estimate the reaction rate constants for all samples. The intrinsic reaction rate constant confirmed the crucial role of surface morphology in ammonia decomposition efficiency. Full article
(This article belongs to the Special Issue Sustainable Photocatalytic Water Treatment and Energy Production)
Show Figures

Figure 1

18 pages, 3540 KB  
Article
Pollutants Concentration during the Construction and Operation Stages of a Long Tunnel: A Case Study of Lowari Tunnel, (Dir–Chitral), Khyber Pakhtunkhwa, Pakistan
by Jehanzeb Khan, Waqas Ahmed, Muhammad Yasir, Ihtisham Islam, Hammad Tariq Janjuhah and George Kontakiotis
Appl. Sci. 2022, 12(12), 6170; https://doi.org/10.3390/app12126170 - 17 Jun 2022
Cited by 15 | Viewed by 5245
Abstract
Long tunnels with significant overburden, changeable geological conditions, a steep gradient, water infiltration, and heavy traffic flow are susceptible to environmental concerns during both construction and operation. The availability of fresh air and visibility is the most important necessity in excavation for tunnel [...] Read more.
Long tunnels with significant overburden, changeable geological conditions, a steep gradient, water infiltration, and heavy traffic flow are susceptible to environmental concerns during both construction and operation. The availability of fresh air and visibility is the most important necessity in excavation for tunnel workers inside the tunnel during the construction phase, as well as those crossing the tunnel during operation. Lowari Tunnel’s tunnel air pollutants were researched. Carbon monoxide (CO), carbon dioxide (CO2), oxygen (O2), hydrogen sulfide (H2S), sulfur dioxide (SO2), nitrogen oxide (NO), ammonia (NH3), nitrogen dioxide (NO2), PM1, PM2.5, PM10, air velocity, dust morphological and particle size distribution analysis are among the parameters under consideration. The findings provide evidence for the development of tunnel air quality. Full article
Show Figures

Figure 1

27 pages, 7574 KB  
Review
GTP-Dependent Regulation of CTP Synthase: Evolving Insights into Allosteric Activation and NH3 Translocation
by Stephen L. Bearne, Chen-Jun Guo and Ji-Long Liu
Biomolecules 2022, 12(5), 647; https://doi.org/10.3390/biom12050647 - 29 Apr 2022
Cited by 16 | Viewed by 6491
Abstract
Cytidine-5′-triphosphate (CTP) synthase (CTPS) is the class I glutamine-dependent amidotransferase (GAT) that catalyzes the last step in the de novo biosynthesis of CTP. Glutamine hydrolysis is catalyzed in the GAT domain and the liberated ammonia is transferred via an intramolecular tunnel to the [...] Read more.
Cytidine-5′-triphosphate (CTP) synthase (CTPS) is the class I glutamine-dependent amidotransferase (GAT) that catalyzes the last step in the de novo biosynthesis of CTP. Glutamine hydrolysis is catalyzed in the GAT domain and the liberated ammonia is transferred via an intramolecular tunnel to the synthase domain where the ATP-dependent amination of UTP occurs to form CTP. CTPS is unique among the glutamine-dependent amidotransferases, requiring an allosteric effector (GTP) to activate the GAT domain for efficient glutamine hydrolysis. Recently, the first cryo-electron microscopy structure of Drosophila CTPS was solved with bound ATP, UTP, and, notably, GTP, as well as the covalent adduct with 6-diazo-5-oxo-l-norleucine. This structural information, along with the numerous site-directed mutagenesis, kinetics, and structural studies conducted over the past 50 years, provide more detailed insights into the elaborate conformational changes that accompany GTP binding at the GAT domain and their contribution to catalysis. Interactions between GTP and the L2 loop, the L4 loop from an adjacent protomer, the L11 lid, and the L13 loop (or unique flexible “wing” region), induce conformational changes that promote the hydrolysis of glutamine at the GAT domain; however, direct experimental evidence on the specific mechanism by which these conformational changes facilitate catalysis at the GAT domain is still lacking. Significantly, the conformational changes induced by GTP binding also affect the assembly and maintenance of the NH3 tunnel. Hence, in addition to promoting glutamine hydrolysis, the allosteric effector plays an important role in coordinating the reactions catalyzed by the GAT and synthase domains of CTPS. Full article
Show Figures

Graphical abstract

25 pages, 16452 KB  
Review
Substrate-Specific Engineering of Amino Acid Dehydrogenase Superfamily for Synthesis of a Variety of Chiral Amines and Amino Acids
by Feng Zhou, Yan Xu, Yao Nie and Xiaoqing Mu
Catalysts 2022, 12(4), 380; https://doi.org/10.3390/catal12040380 - 29 Mar 2022
Cited by 26 | Viewed by 6502
Abstract
Amino acid dehydrogenases (AADHs) are a group of enzymes that catalyze the reversible reductive amination of keto acids with ammonia to produce chiral amino acids using either nicotinamide adenine dinucleotide (NAD+) or nicotinamide adenine dinucleotide phosphate (NADP+) as cofactors. [...] Read more.
Amino acid dehydrogenases (AADHs) are a group of enzymes that catalyze the reversible reductive amination of keto acids with ammonia to produce chiral amino acids using either nicotinamide adenine dinucleotide (NAD+) or nicotinamide adenine dinucleotide phosphate (NADP+) as cofactors. Among them, glutamate dehydrogenase, valine dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and tryptophan dehydrogenase have been classified as a superfamily of amino acid dehydrogenases (s-AADHs) by previous researchers because of their conserved structures and catalytic mechanisms. Owing to their excellent stereoselectivity, high atom economy, and low environmental impact of the reaction pathway, these enzymes have been extensively engineered to break strict substrate specificities for the synthesis of high value-added chiral compounds (chiral amino acids, chiral amines, and chiral amino alcohols). Substrate specificity engineering of s-AADHs mainly focuses on recognition engineering of the substrate side chain R group and substrate backbone carboxyl group. This review summarizes the reported studies on substrate specificity engineering of s-AADHs and reports that this superfamily of enzymes shares substrate specificity engineering hotspots (the inside of the pocket, substrate backbone carboxyl anchor sites, substrate entrance tunnel, and hinge region), which sheds light on the substrate-specific tailoring of these enzymes. Full article
(This article belongs to the Topic Advances in Enzymes and Protein Engineering)
Show Figures

Figure 1

Back to TopTop