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Keywords = haploid seed identification

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19 pages, 2414 KB  
Article
Compatibility and Stability Analysis of Haploid Inducers under Different Source Germplasm and Seasons in Maize Using GGE Biplot
by Abil Dermail, Thomas Lübberstedt, Willy Bayuardi Suwarno, Sompong Chankaew, Kamol Lertrat, Vinitchan Ruanjaichon and Khundej Suriharn
Agronomy 2024, 14(7), 1505; https://doi.org/10.3390/agronomy14071505 - 11 Jul 2024
Viewed by 1694
Abstract
Multiple factors can affect the R1-nj purple kernel expression and seed set, reducing its efficiency in identifying haploids in maize. The complex interaction among the haploid inducer (HI), source germplasm (SG), and season (S) is inevitable in in vivo maize haploid induction but [...] Read more.
Multiple factors can affect the R1-nj purple kernel expression and seed set, reducing its efficiency in identifying haploids in maize. The complex interaction among the haploid inducer (HI), source germplasm (SG), and season (S) is inevitable in in vivo maize haploid induction but could be used through compatibility and stability tests. We tested five HI genotypes on 25 distinct source germplasm in two different seasons of tropical savanna in Thailand. The dry season was more suitable than the rainy season for haploid induction. We noticed varying degrees of R1-nj inhibition among the 25 tropical source germplasm, with some of them exhibiting significant issues with the R1-nj purple kernel expression. Therefore, using the R1-nj alone may not provide accurate ploidy identification in maize. Despite the intense R1-nj expression, haploid inducer BHI306 showed poor stability and compatibility with tropical source germplasm for pollination rate and seed set during the rainy season. The GGE biplot suggested KHI42 and KHI64 as the most compatible haploid inducers under their respective two different mega-source germplasm for the pollination rate and R1-nj seed set. These findings can guide breeders in selecting the most compatible and stable haploid inducers under varying conditions. Full article
(This article belongs to the Section Crop Breeding and Genetics)
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12 pages, 5373 KB  
Article
Research on a Multi-Lens Multispectral Camera for Identifying Haploid Maize Seeds
by Xiantao He, Jinting Zhu, Pinxuan Li, Dongxing Zhang, Li Yang, Tao Cui, Kailiang Zhang and Xiaolong Lin
Agriculture 2024, 14(6), 800; https://doi.org/10.3390/agriculture14060800 - 22 May 2024
Cited by 5 | Viewed by 1324
Abstract
Haploid breeding can shorten the breeding period of new maize varieties and is an important means to increase maize yield. In the breeding program, a large number of haploid seeds need to be screened, and this step is mainly achieved manually, which hinders [...] Read more.
Haploid breeding can shorten the breeding period of new maize varieties and is an important means to increase maize yield. In the breeding program, a large number of haploid seeds need to be screened, and this step is mainly achieved manually, which hinders the industrialization of haploid maize breeding. This article aims to develop a multispectral camera to identify the haploid seeds automatically. The camera was manufactured by replacing narrow-band filters of the ordinary CCD camera, and the RGB, 405 nm, 980 nm and 1050 nm images of haploid or diploid seeds were simultaneously captured (the characteristic wavelengths were determined according to color and high-oil markers of maize). The performance was tested using four maize varieties with the two genetic markers. The results show that the developed multispectral camera significantly improved the recognition accuracy of haploid maize seeds to 92.33%, 97.33%, 97% and 93.33% for the TYD1903, TYD1904, TYD1907 and TYD1908 varieties, respectively. The cameras in the near-infrared region (wavelengths of 980 nm and 1050 nm) achieved better performance for the varieties of high-oil marker, with an increase of 0.84% and 1.5%, respectively. These results demonstrate the strong potential of the multispectral imaging technology in the haploid seed identification of maize. Full article
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14 pages, 5300 KB  
Article
Effectiveness of R1-nj Anthocyanin Marker in the Identification of In Vivo Induced Maize Haploid Embryos
by Luis Antonio Lopez, John Ochieng, Mario Pacheco, Leocadio Martinez, Hamilton Amoshe Omar, Manje Gowda, Boddupalli M. Prasanna, Kanwarpal S. Dhugga and Vijay Chaikam
Plants 2023, 12(12), 2314; https://doi.org/10.3390/plants12122314 - 14 Jun 2023
Cited by 4 | Viewed by 2529
Abstract
Doubled haploid (DH) technology has become integral to maize breeding programs to expedite inbred line development and increase the efficiency of breeding operations. Unlike many other plant species that use in vitro methods, DH production in maize uses a relatively simple and efficient [...] Read more.
Doubled haploid (DH) technology has become integral to maize breeding programs to expedite inbred line development and increase the efficiency of breeding operations. Unlike many other plant species that use in vitro methods, DH production in maize uses a relatively simple and efficient in vivo haploid induction method. However, it takes two complete crop cycles for DH line generation, one for haploid induction and the other one for chromosome doubling and seed production. Rescuing in vivo induced haploid embryos has the potential to reduce the time for DH line development and improve the efficiency of DH line production. However, the identification of a few haploid embryos (~10%) resulting from an induction cross from the rest of the diploid embryos is a challenge. In this study, we demonstrated that an anthocyanin marker, namely R1-nj, which is integrated into most haploid inducers, can aid in distinguishing haploid and diploid embryos. Further, we tested conditions that enhance R1-nj anthocyanin marker expression in embryos and found that light and sucrose enhance anthocyanin expression, while phosphorous deprivation in the media had no affect. Validating the use of the R1-nj marker for haploid and diploid embryo identification using a gold standard classification based on visual differences among haploids and diploids for characteristics such as seedling vigor, erectness of leaves, tassel fertility, etc., indicated that the R1-nj marker could lead to significantly high false positives, necessitating the use of additional markers for increased accuracy and reliability of haploid embryo identification. Full article
(This article belongs to the Collection Doubled Haploid Technology in Plant Breeding)
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12 pages, 1503 KB  
Article
QTL Mapping for Wheat Seed Dormancy in a Yangmai16/Zhongmai895 Double Haploid Population
by Gang Guo, Shuhao Xu, Hao Chen, Yuanfeng Hao and Hailiang Mao
Plants 2023, 12(4), 759; https://doi.org/10.3390/plants12040759 - 8 Feb 2023
Cited by 7 | Viewed by 2603
Abstract
Pre-harvest sprouting (PHS) of wheat reduces grain yield and quality, and it is strongly affected by seed dormancy. Therefore, identification of quantitative trait loci (QTL) for seed dormancy is essential for PHS resistance breeding. A doubled haploid (DH) population, consisting of 174 lines [...] Read more.
Pre-harvest sprouting (PHS) of wheat reduces grain yield and quality, and it is strongly affected by seed dormancy. Therefore, identification of quantitative trait loci (QTL) for seed dormancy is essential for PHS resistance breeding. A doubled haploid (DH) population, consisting of 174 lines from the cross between Yangmai16 (YM16) and Zhongmai895 (ZM895) was used to detect QTLs for seed dormancy and grain color. For seed dormancy, a total of seven QTLs were detected on chromosomes 2A, 3A, 3D, 4D, 5B and 5D over four environments, among which Qdor.hzau-3A, Qdor.hzau-3D.1 and Qdor.hzau-3D.2 were stably detected in more than two environments. For grain color, only two QTLs, Qgc.hzau-3A and Qgc.hzau-3D were detected on chromosomes 3A and 3D, which physically overlapped with Qdor.hzau-3A and Qdor.hzau-3D.1, respectively. Qdor.hzau-3D.2 has never been reported elsewhere and is probably a novel locus with allelic effect of seed dormancy contributed by weakly dormant parent ZM895, and a KASP marker was developed and validated in a wheat natural population. This study provides new information on the genetic dissection of seed dormancy, which may aid in further improvement for marker-assisted wheat breeding for PHS resistance. Full article
(This article belongs to the Section Plant Molecular Biology)
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18 pages, 355 KB  
Article
Identification of SSR Markers Associated with Yield-Related Traits and Heterosis Effect in Winter Oilseed Rape (Brassica Napus L.)
by Joanna Wolko, Agnieszka Łopatyńska, Łukasz Wolko, Jan Bocianowski, Katarzyna Mikołajczyk and Alina Liersch
Agronomy 2022, 12(7), 1544; https://doi.org/10.3390/agronomy12071544 - 28 Jun 2022
Cited by 12 | Viewed by 3183
Abstract
The identification of markers responsible for regulating important agronomic traits in rapeseed supports breeding and increases the seed yield. Microsatellite (SSR) markers are mainly used as ‘neutral’ genetic markers but are also linked with many biological functions. The objective of this study was [...] Read more.
The identification of markers responsible for regulating important agronomic traits in rapeseed supports breeding and increases the seed yield. Microsatellite (SSR) markers are mainly used as ‘neutral’ genetic markers but are also linked with many biological functions. The objective of this study was identification of microsatellite markers associated with important agronomic traits affecting the seed yield of winter oilseed rape and with the heterosis effect for these traits. The plant material consists of four parental lines, 60 doubled haploid (DH) lines, 60 single cross hybrids, and 60 three-way cross hybrids. The association between molecular markers and observed traits was estimated using regression analysis. Among 89 SSR markers, 43 were polymorphic, and 15 were selected for mapping because they demonstrated stability in both years of observation. These markers were physically mapped in the rapeseed reference genomes and their immediate vicinity was searched to identify candidate genes associated with the studied traits. Six markers (BrGMS3837, BnEMS1119, BrGMS2901, BnGMS0509, BrGMS3688, BrGMS4057), which showed a positive estimation effect in our association analysis, and thus increased the value of a given trait or heterosis effect, turned out to be linked with genes that could be responsible for the development and growth of plants. Full article
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