Search Results (155)

Well integrity is paramount for the safe, environmentally responsible, and economically viable operation of wells throughout their lifecycle, encompassing conventional oil and gas production, unconventional resource extraction (e.g., shale gas and tight oil), and geological storage applications (CO₂, H₂, and natural gas). This review presents a comprehensive synthesis of well integrity challenges, failure mechanisms, monitoring technologies, and management strategies across these operational domains. Key integrity threats—including cement sheath degradation (chemical attack, debonding, cracking, microannuli), casing failures (corrosion, collapse, burst, buckling, fatigue, wear, and connection damage), sustained casing pressure (SCP), and wellhead leaks—are examined in detail. Unique challenges posed by hydraulic fracturing in unconventional wells and emerging risks in CO₂ and hydrogen storage, such as corrosion, carbonation, embrittlement, hydrogen-induced cracking (HIC), and microbial degradation, are also highlighted. The review further explores the evolution of integrity standards (NORSOK, API, ISO), the implementation of Well Integrity Management Systems (WIMS), and the integration of advanced monitoring technologies such as fiber optics, logging tools, and real-time pressure sensing. Particular emphasis is placed on the role of digital technologies—including artificial intelligence, machine learning, and digital twin systems—in enabling predictive maintenance, early failure detection, and lifecycle risk management. The novelty of this review lies in its integrated, cross-domain perspective and its emphasis on digital twin applications for continuous, adaptive well integrity surveillance. It identifies critical knowledge gaps in modeling, materials qualification, and data integration—especially in the context of long-term CO₂ and H₂ storage—and advocates for a proactive, digitally enabled approach to lifecycle well integrity. Full article

The breast microbiome remains stable throughout a woman’s life. The breast is not a sterile organ, and its microbiota exhibits a distinct composition compared to other body sites. The breast microbiome is a community characterized by an abundance of Proteobacteria and Firmicutes, which represent the result of host microbial adaptation to the fatty acid environment in the tissue. The breast microbiome demonstrates dynamic adaptability during lactation, responding to maternal physiological changes and infant interactions. This microbial plasticity modulates local immune responses, maintains epithelial integrity, and supports tissue homeostasis, thereby influencing both breast health and milk composition. Disruptions in this balance, the dysbiosis, are closely linked to inflammatory breast conditions such as mastitis. Risk factors for breast cancer (BC) include genetic mutations, late menopause, obesity, estrogen metabolism, and alterations in gut microbial diversity. Gut microbiota can increase estrogen bioavailability by deconjugating estrogen-glucuronide moieties. Perturbations of this set of bacterial genes and metabolites, called the estrobolome, increases circulating estrogens and the risk of BC. Fusobacterium nucleatum has recently been associated with BC. It moves from the oral cavity to other body sites hematogenously. This review deals with the characteristics of the breast microbiome, with a focus on F. nucleatum, highlighting its dual role in promoting tumor growth and modulating immune responses. F. nucleatum acts both on the Wnt/β-catenin pathway by positively regulating MYC expression and on apoptosis by inhibiting caspase 8. Furthermore, F. nucleatum binds to TIGIT and CEACAM1, inhibiting T-cell cytotoxic activity and protecting tumor cells from immune cell attack. F. nucleatum also inhibits T-cell function through the recruitment of myeloid suppressor cells (MDSCs). These cells express PD-L1, which further reduces T-cell activation. A deeper understanding of F. nucleatum biology and its interactions with host cells and co-existing symbiotic microbiota could aid in the development of personalized anticancer therapy. Full article

Concrete cracks and sulfate degradation severely compromise structural durability, highlighting the need for sustainable solutions to enhance longevity and minimize environmental impact. This study assesses the efficacy of bacterial self-healing technology utilizing Bacillus megaterium (BM) and Bacillus sphaericus (BS) in enhancing the resistance of concrete to sulfate attacks and improving its mechanical properties. Bacterial suspensions (1% and 2.5% of cement weight) were mixed with concrete containing silica fume or fly ash (10% of cement weight) and cured in freshwater or sulfate solutions (2%, 5%, and 10% concentrations). Specimens were tested for compressive strength, flexural strength, and microstructure using a Scanning Electron Microscope (SEM), Energy-Dispersive X-ray Spectroscopy (EDS), and X-ray diffraction (XRD) at various ages. The results indicate that a 2.5% bacterial content yielded the best performance, with BM surpassing BS, enhancing compressive strength by up to 41.3% and flexural strength by 52.3% in freshwater-cured samples. Although sulfate exposure initially improved early-age strength by 1.97% at 7 days, it led to an 8.5% loss at 120 days. Bacterial inclusion mitigated sulfate damage through microbially induced calcium carbonate precipitation (MICP), sealing cracks, and bolstering durability. Cracked specimens treated with BM recovered up to 93.1% of their original compressive strength, promoting sustainable, sulfate-resistant, self-healing concrete for more resilient infrastructure. Full article

The present research features an experimental comparative design and the objective of this work was to determine the susceptibility to microbiological contamination in fatty acid methyl esters (FAMEs) and the FAME–water interface of residual and refined lard, large volume simulating storage conditions as fuel supply chain, and to identify the microorganisms developed. The plates were seeded according to ASTM E-1259 and the instructions provided by the manufacturer of the Bushnell Haas agar. Microbiological growth was observed at the FAME–water interface of FAME obtained from residual lard. Using the MALDI-TOF mass spectrometry technique, Pseudomonas aeruginosa and Streptomyces violaceoruber bacteria were identified in the residual lard FAMEs, with the latter being previously reported in FAMEs. The implications of microorganism development on the physicochemical quality of FAMEs are significant, as it leads to an increase in the acid index, which may negatively impact metals by inducing corrosion. The refined lard FAMEs did not show any development of microorganisms. The present research concluded that residual lard tends to be more prone to microbiological attack if the conditions of water and temperature affect microbial growth. The findings will contribute to the knowledge base for a safer introduction of FAMEs into the biofuel matrix. Full article

The results of this study, which involved treating cotton fabrics with three fluorescent hyperbranched polymers modified with 1,8-naphthalamide (P1), acridine (P2), and dansyl (P3) groups, could have applications in the development of antimicrobial textiles with self-disinfecting ability. The polymers, dissolved in DMF/water solution, were deposited on the cotton fabric using the exhaustion method. The fabrics were thoroughly analyzed by reflection spectra, CIEL*a*b* coordinates, and color difference (∆E). The release of the polymers from the cotton surface was studied in a phosphate buffer with pH = 7.4 and an acetate buffer with pH = 4.5 at 37 °C for 10 h. It is shown that at pH = 7.4, the release of the three polymers occurs slowly (about 4–5%). In contrast, in an acidic medium, due to protonation of the tertiary amino group of 1,8-naphthalimide, P1 passes significantly more readily into the aqueous solution (35%). The possibility of singlet oxygen (¹O₂) generation by the polymers and the cotton fabrics treated with them under sunlight irradiation was followed using an iodometric method. The microbiological activity was investigated against Gram-positive Bacillus cereus and Gram-negative Pseudomonas aeruginosa as model bacterial strains in the dark and after irradiation with sunlight. The antimicrobial activity of the polymers increased after light irradiation, as ¹O₂ attacks and destroys the bacterial cell membrane. Scanning electron microscopy showed that a stable bacterial biofilm had formed on the untreated cotton surface, but treatment with hyperbranched polymers prevented its formation. However, many bacteria were still observed on the fiber surface when the microbial test was performed in the dark, whereas only a few single bacteria were noticed after the illumination. A virucidal effect against respiratory viruses HRSV-2 and AAdV-5 was observed only after irradiation with sunlight. Full article

Background/Objectives: Recent studies show that the gut microbiome plays a pivotal role in the (patho)physiology of metabolic dysfunction-associated steatotic liver disease (MASLD), likely via metabolites they produce that are transported via the portal vein towards the liver where they first encounter liver sinusoidal endothelial cells (LSECs). LSECs may modulate the effects the gut microbes have on the liver, e.g., on the progression of MASLD. Methods: This review aims to describe the current knowledge on the role of LSECs in mediating the effect of gut microbial products in MASLD. Results: Various studies show that LSECS have a contributing role in MASLD pathogenesis, suggesting that proper LSEC functionality is required to protect the liver from gut-driven attacks. Conclusions: Dedicated studies on the role and effects of gut-derived molecules on LSEC functionality are lacking, likely because such studies depend on labor-intensive techniques such as scanning electron microscopy (SEM). Full article

Geniposide, the predominant bioactive constituent identified in the traditional Chinese medicine herb Gardenia jasminoides, demonstrates clinically significant pharmacological properties. However, the clinical application of geniposide is significantly limited by its insufficient lipophilicity and consequent compromised oral bioavailability. To enhance the lipophilicity and bioavailability of geniposide, a novel whole-cell-mediated catalytic approach was developed for the first time. Aspergillus oryzae whole cells exhibited the highest catalytic activity among microbial strains screened for geniposide decanoylation in the organic solvents. The optimal reaction conditions were identified as follows: acetonitrile served as the reaction solvent, with a substrate molar ratio of 15:1, a whole-cell dosage of 20 mg/mL, and the reaction temperature maintained at 50 °C. Under these optimized conditions, the initial reaction rate was 6.1 mmol/L·h, the conversion reached 99%, and the regioselectivity exceeded 99%. In addition, nine geniposide esters were successfully synthesized, exhibiting outstanding conversion efficiency and high regioselectivities. The pronounced regioselectivity exhibited by Aspergillus oryzae cells toward the 6′-hydroxy group of the glycoside ring in geniposide can be attributed to the lower steric hindrance at this position relative to other hydroxyl moieties, which may enter into the enzyme’s active site more easily to attack the acyl-enzyme intermediate. Full article

The root-associated microbiome significantly influences plant health and pest resistance, yet the temporal dynamics of its compositional and functional change in response to Ectropis grisescens Warren (Lepidoptera: Geometridae) infestation remain largely unexplored. The study took samples of leaves, roots, and rhizosphere soil at different times after the plants were attacked by E. grisescens. These samples were analyzed using transcriptomic and high-throughput sequencing of 16S rRNA techniques. The goal was to understand how the plant’s defense mechanisms and the microbial community around the roots changed after the attack. Additionally, bacterial feedback assays were conducted to evaluate the effects of selected microbial strains on plant growth and pest defense responses. By conducting 16S rRNA sequencing on the collected soil samples, we found significant shifts in bacterial communities by the seventh day, suggesting a lag in community adaptation. Transcriptomic analysis revealed that E. grisescens attack induced reprogramming of the tea root transcriptome, upregulating genes related to defensive pathways such as phenylpropanoid and flavonoid biosynthesis. Metagenomic data indicated functional changes in the rhizosphere microbiome, with enrichment in genes linked to metabolic pathways and nitrogen cycling. Network analysis showed a reorganization of core microbial members, favoring nitrogen-fixing bacteria like Burkholderia species. Bacterial feedback assays confirmed that selected strains, notably Burkholderia cepacia strain ABC4 (T1) and a nine-strain consortium (T5), enhanced plant growth and defense responses, including elevated levels of flavonoids, polyphenols, caffeine, jasmonic acid, and increased peroxidase (POD) and superoxide dismutase (SOD) activities. This study emphasizes the potential of utilizing root-associated microbial communities for sustainable pest management in tea cultivation, thereby enhancing resilience in tea crops while maintaining ecosystem balance. Full article

Acute pancreatitis (AP) is a common and potentially severe gastrointestinal condition characterized by acute inflammation of the pancreas. The pathophysiology of AP is multifactorial and intricate, involving a cascade of events that lead to pancreatic injury and systemic inflammation. The progression of AP is influenced by many factors, including genetic predispositions, environmental triggers, and immune dysregulation. Recent studies showed a critical involvement of the gut microbiota in shaping the immune response and modulating inflammatory processes during AP. This review aims to provide a comprehensive overview of the emerging role of gut microbiota and probiotics in AP. We analyzed the implication of gut microbiota in pathogenesis of AP and the modification during an acute attack. The primary goals of microbiome-based therapies, which include probiotics, prebiotics, antibiotics, fecal microbiota transplantation, and enteral nutrition, are to alter the composition of the gut microbial community and the amount of metabolites derived from the microbiota. By resetting the entire flora or supplementing it with certain beneficial organisms and their byproducts, these therapeutic approaches aim to eradicate harmful microorganisms, reducing inflammation and avoiding bacterial translocation and the potential microbiota-based therapeutic target for AP from nutrition to pre- and probiotic supplementation to fecal transplantation. Full article

Background: Type 1 diabetes (T1D) is a severe chronic T-cell mediated autoimmune disease that attacks the insulin-producing beta cells of the pancreas. The multifactorial nature of T1D involves both genetic and environmental components, with recent research focusing on the gut microbiome as a crucial environmental factor in T1D pathogenesis. The gut microbiome and its metabolites play an important role in modulating immunity and autoimmunity. In recent years, studies have revealed significant alterations in the taxonomic and functional composition of the gut microbiome associated with the development of islet autoimmunity and T1D. These changes include reduced production of short-chain fatty acids, altered bile acid and tryptophan metabolism, and increased intestinal permeability with consequent perturbations of host (auto)immune responses. Methods/Results: In this review, we summarize and discuss recent observational, mechanistic and etiological studies investigating the gut microbiome in T1D and elucidating the intricate role of gut microbes in T1D pathogenesis. Moreover, we highlight the recent advances in intervention studies targeting the microbiota for the prevention or treatment of human T1D. Conclusions: A deeper understanding of the evolution of the gut microbiome before and after T1D onset and of the microbial signals conditioning host immunity may provide us with essential insights for exploiting the microbiome as a prognostic and therapeutic tool. Full article

Regenerative agriculture and the use of bioinputs have been gaining prominence in the global agribusiness sector, driven by the growing demand for healthier foods produced with minimal impact on ecosystems. In this context, compost and its derivatives (compost extracts and teas) are used to provide effective microorganisms to crops, although production processes affect the efficiency of compost extracts, as well as the soil microbiota. Thus, the hypothesis raised was that the organic matter source used for compost formation affects the agronomic efficiency of compost extracts. The objective of this study was to evaluate the effect of compost extracts based on litterfall of angiosperm (AC) and gymnosperm (GC) species, and the use of inoculation with the nitrogen-fixing bacteria Bradyrhizobium japonicum and Azospirillum brasilense (Bra+Azo), on soil quality, crop growth, grain yield, and disease control in soybean (Glycine max L.) crops. Using AC and GC resulted in varying effects on soybean growth and soil microbial biomass carbon (SMBC), confirming the hypothesis that the organic matter source affects the agronomic efficiency of compost extracts. Plants inoculated with Bra+Azo exhibited higher chlorophyll contents, resulting in a higher photochemical yield than for those treated with compost extracts (AC and GC). However, plants inoculated with AC and GC exhibited high plasticity in mitigating photochemical stress, reaching similar photosynthetic and transpiration rates to those observed in plants inoculated with Bra+Azo. Additionally, inoculation with Bra+Azo, overall, improved the photosynthetic efficiency of soybean plants, and the compost extracts (AC and GC) were more effective than the inoculation with Bra+Azo in increasing soybean 1000-grain weight, probably due to improvements in root development. The growth promotion observed with AC and GC is likely attributed to increases in SMBC by these compounds, denoting improvements in soil quality and biocontrol of damage caused by insect attacks. Full article

The objective of this study is to evaluate the degradation of end-of-life BWRO membranes sourced from a factory in France by analyzing their water permeability, roughness, and chemical composition in order to diagnose the level of degradation incurred during their first life cycle in water softening. Following this, two new applications for the end-of-life BWRO membranes were investigated: (i) as ultrafiltration membranes (UF) for domestic effluent treatment and (ii) as cation exchange membranes (CEM) for use in fungal microbial fuel cells (FMFC). The UF membrane was renovated with an acetic acid treatment and, subsequently, used for domestic effluent filtration. The cation exchange membrane was developed in two steps: (i) chlorine treatment and (ii) the deposition of an Amer Sil layer, a functional coating formed by an interpenetrating polymer network (IPN) made of sulfonated polyether sulfone (S-PES) in a cross-linked matrix of acrylic acid and divinylbenzene. Full article

Microbial attack, particularly fungal degradation of cellulose, is a leading cause of paper damage. To address fungal spores and the rising concern of microbial drug resistance, a nano-Germanium dioxide (GeO₂)/cetyltrimethylammonium bromide (CTAB) complex (nano-GeO₂/CTAB complex) with potent antibacterial properties was synthesized. Its inhibitory effects were evaluated against bacteria, including Gram-positive Staphylococcus aureus and Gram-negative Escherichia coli, as well as fungi isolated from paper (Fusarium spp., Aspergillus spp., and Penicillium citrinum). The nano-GeO₂/CTAB complex exhibited significant (p < 0.05) inhibitory effects against S. aureus and E. coli. Moreover, a 60 min treatment with 1 mg/mL of the complex significantly inhibited the growth of all tested fungi and reduced their biomass after five days of culture, while 4 mg/mL completely deactivated spores. Filter paper pre-treated with the nano-GeO₂/CTAB complex showed complete resistance to microbial attack, exhibiting no fungal growth and a clear inhibition zone devoid of bacterial growth. In contrast, untreated controls displayed fungal coverage exceeding 95% within five days. These findings highlight the nano-GeO₂/CTAB complex as a promising antimicrobial agent for protecting paper materials from microbial degradation. Full article

Cereal grains are frequently attacked by microorganisms and insects during storage and processing, which negatively affects their quality, safety, and market value. Therefore, protecting stored grains from microbial contamination is crucial for food industries, farmers, public health associations, and environmental agencies. Due to the negative impact of synthetic gray chemicals, antimicrobial plant-based essential oils (EOs) can serve as alternative, safer, environmentally friendly preservatives that can prolong the shelf life of cereals. However, high volatility, low solubility, hydrophobicity, and quick oxidation limit their practical applicability. Using nanotechnology for the nanoencapsulation of EOs into polymeric matrices allows sustained release and ensures targeted delivery without significantly altering the organoleptic attributes of cereals, making EOs a new-generation green preservative. This ultimately overcomes the challenges of practical applications. The application of nanoencapsulated EOs in grain storage provides an effective and novel defense against microbes, insects, and other contaminants. Hence, the current review thoroughly examines the preservative potential of nanoencapsulated EOs in terms of antimicrobial and insecticidal efficacy for protecting stored cereal grains. It also highlights the challenges encountered during application and the safety concerns of using nanoencapsulated EOs in protecting cereal grains during post-harvest storage. Full article

L-Carnitine, sourced from red meat, dairy, and endogenous synthesis, plays a vital role in fatty acid metabolism and energy production. While beneficial for cardiovascular, muscular, and neural health, its interaction with the gut microbiota and conversion into trimethylamine (TMA) and trimethylamine N-oxide (TMAO) raise concerns about heart health. TMAO, produced through the gut-microbial metabolism of L-carnitine and subsequent liver oxidation, is associated with cardiovascular risks, including atherosclerosis, heart attacks, and stroke. It contributes to cholesterol deposition, vascular dysfunction, and platelet aggregation. Omnivorous diets, rich in L-carnitine, are associated with higher TMAO levels compared to plant-based diets, which are linked to lower cardiovascular disease risks. Dietary interventions, such as increasing fiber, polyphenols, and probiotics, can modulate the gut microbiota to reduce TMAO production. These strategies seek to balance L-carnitine’s benefits with its potential risks related to TMAO production. Future research should focus on personalized approaches to optimize L-carnitine use while mitigating its cardiovascular impacts, exploring microbial modulation and dietary strategies to minimize the TMAO levels and associated risks. Full article