Search Results (7)

Gut microbes thrive by utilising host energy and, in return, provide valuable benefits, akin to a symbiotic relationship. Here, metagenomic sequencing was performed to characterise and compare the community composition, diversity and antibiotic resistance of the gut microbiota of Relict gull (Larus relictus) and Anatidae species. Alpha diversity analysis revealed that the intestinal microbial richness of L. relictus was significantly lower than that of Anatidae, with distinct differences observed in microbial composition. Notably, the intestines of L. relictus harboured more pathogenic bacteria such as clostridium, which may contribute to the decline in their population and endangered status. A total of 117 strains of Escherichia coli were isolated, with 90.60% exhibiting full susceptibility to 21 antibiotics, while 25.3% exhibited significant biofilm formation. Comprehensive Antibiotic Resistance Database data indicated that glycopeptide resistance genes were the most prevalent type carried by migratory birds, alongside quinolone, tetracycline and lincosamide resistance genes. The abundance of resistance genes carried by migratory birds decreased over time. This metagenomic analysis provides valuable insights into the intestinal microbial composition of these wild bird species, offering important guidance for their conservation efforts, particularly for L. relictus, and contributing to our understanding of pathogen spread and antibiotic-resistant bacteria. Full article

Hongjian Nur is an important breeding and stopover area for the globally endangered Relict gull (Larus relictus). This is where the species was first found in 2000. The breeding population of this species was monitored over the long term by directly counting nests from 2001 to 2020 in Hongjian Nur, Shaanxi, China. Our results suggest that breeding pairs increased rapidly, from 87 nests in 2001 to 7708 nests in 2010; at this point, the breeding population accounted for more than 85% of the global total, and was at the highest value during the past two decades. Subsequently, breeding pairs continued to decrease dramatically and reached a minimum number of 2054 nests in 2015, approximately 70% less than at their peak. In view of this situation, breeding islets were restored in 2014 and 2017, and the breeding population recovered slowly. Due to the changing ecological environment, breeding islets showed the same instability as the breeding population. Our conclusions support previous research, highlighting the importance of water level. Full article

Background and objectives—Podocarpus latifolius (synonym of P. milanjianus) is a key tree representative of Afromontane forests where it is highly threatened by climate and land-use changes. While large populations occur in East Africa, only a few isolated and usually small populations remain in western Central Africa (Cameroon to Angola). Studying the evolutionary history of such relictual populations can thus be relevant to understand their resilience under changing environments. Materials and Methods—we developed nine polymorphic nuclear microsatellites (nSSRs) to estimate genetic variability, (historical) gene flow, and demographic changes among natural populations from Central to East Africa. Results—despite the extended distribution range of P. latifolius, a strong isolation-by-distance pattern emerges at the intra-population scale, indicating low seed and pollen dispersal capacities. Central African populations display a lower genetic diversity (He = 0.34 to 0.61) and are more differentiated from each other (F_ST = 0.28) than are East African populations (He = 0.65 to 0.71; F_ST = 0.10), suggesting high genetic drift in the Central African populations. Spatial genetic structure reveals past connections between East and West Africa but also a gene flow barrier across the equator in western Central Africa. Demographic modelling anchors the history of current lineages in the Pleistocene and supports a strong demographic decline in most western populations during the last glacial period. By contrast, no signature of demographic change was detected in East African populations. Conclusions—in Cameroon, our results exclude a recent (re)colonization from one source population of all mountain ranges, but rather indicate long-term persistence of populations in each mountain with fluctuating sizes. A higher impact of genetic drift and further loss of diversity can be expected by survival through climatically unfavorable periods in such small refugial populations. Tracking the Quaternary legacy of podocarp populations is thus essential for their conservation since there is a temporal gap between environment crises and an ecological/genetic answer at the population level. Full article

The longhorn beetle, Callipogon (Eoxenus) relictus Semenov, is the only remnant species found in the Palearctic region, while all other Callipogon species are distributed mainly in Central America and partly in South America. This species has been placed in the first category (as ‘critically endangered’) of the Red Data Book in Russia and designated as one of the top-priority target species among all endangered invertebrate species for restoration in South Korea since 2006. Although its restricted distribution in Northeast Asia with a high conservational value has been highlighted, genetic features of C. relictus from different geographic regions remain unexplored. We first investigated the level of genetic diversity and phylogeographic patterns of C. relictus to evaluate the current conservational status and the feasibility of the implementation of a restoration program. The average genetic divergence of mitochondrial gene COI based on Kimura-2-parameter distance among the four regions in Russia, China, North Korea, and South Korea was 2.2%, which lies within the range of intraspecific levels. However, two separate clades with 3.8% divergence were identified, despite no geographical clustering of haplotypes. The linear pattern of the haplotype network with a high level of haplotype and nucleotide diversities suggests that the wide range of currently fragmented populations might be the remnant of genetically diverse populations in the past. This study will provide crucial information on the genetic characteristics and phylogeographic history of C. relictus, which will help to establish conservation strategies for this cherished insect species in Northeast Asia. Full article

For the past 25 years, the twin tools of highly variable genetic markers (microsatellites) and paternity assignment have provided a powerful approach for investigating pollination patterns in trees, including many Quercus species. Early studies consistently demonstrated surprisingly abundant and extensive long-distance pollen movement in oaks. Indeed, numerous studies showed high levels of pollen immigration (50% or more), even for relatively isolated stands of oaks. Research also characterized fertilization patterns within stands and between hybridizing species in mixed stands. More recent studies have expanded our knowledge of genetic exchange effected by successful pollen movement, identified even more remarkable examples of the distances Quercus pollen can travel, and examined pollination patterns in relictual populations as well as those at the leading edges of range expansion. While the paradigm of long distance pollination continues to hold, a few recent studies that have also revealed the limits of pollen movement, identifying cases of reproductive isolation in extreme situations, where populations are at risk. This review will highlight what has been learned about Quercus pollination, what questions remain, and propose implications for forest management in the face of changing landscapes and climates. Full article

Rear-edge populations are of significant scientific interest because they can contain allelic variation not found in core-range populations. However, such populations can differ in their level of genetic diversity and divergence reflecting variation in life-history traits, demographic histories and human impacts. Using 13 EST-microsatellites, we investigated the genetic diversity and differentiation of rear-edge populations of the Japanese endemic conifer Thuja standishii (Gordon) Carr. in southwest Japan from the core-range in northeast Japan. Range-wide genetic differentiation was moderate (Fst = 0.087), with northeast populations weakly differentiated (Fst = 0.047), but harboring high genetic diversity (average population-level Ar = 4.76 and Ho = 0.59). In contrast, rear-edge populations were genetically diverged (Fst = 0.168), but contained few unique alleles with lower genetic diversity (Ar = 3.73, Ho = 0.49). The divergence between rear-edge populations exceeding levels observed in the core-range and results from ABC analysis and species distribution modelling suggest that these populations are most likely relicts of the Last Glacial Maximum. However, despite long term persistence, low effective population size, low migration between populations and genetic drift have worked to promote the genetic differentiation of southwest Japan populations of T. standishii without the accumulation of unique alleles. Full article

The provision of valuable ecosystem services by tropical swamp forests (mainly carbon sequestration and storage in biomass and soil) explains their ecological importance. Current efforts toward the conservation of these ecosystems, however, face strong limitations as their spatial variation is largely unknown, particularly in regions where they occur over large areas. Here, we analyze the α-diversity (i.e., effective number of species or true diversity) and community structure variability of three tropical swamp forest communities distributed along an approximately 300 km long portion of the Usumacinta River Basin, southern Mexico. We sampled eighty-three 625-m² plots to characterize the diversity and structural attributes of the woody plant communities. We recorded 2302 individuals belonging to 60 species and 25 families. Both α-diversity and structural attributes differed significantly among the three communities. The most inland community stood out for having the highest α-diversity for three true diversity values. Interestingly, the mangrove Rhizophora mangle L. was one of the dominant species, both in the swamp forest located closest to the coast and in the community farthest away from the sea. Basal area and density of individuals also had their maxima in the most inland swamp forest. The diversity and structural differences observed among the examined swamp forests seem to be related to contrasting environmental conditions, such as water salinity, distance to the coastline, and the hydrological dynamics of the Usumacinta River. We emphasize the urgency to conserve R. mangle populations in the swamp forest located farthest away from the coast due to its unusual habitat association, which appears to be a relictual condition. Full article