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9 pages, 211 KB  
Case Report
Botulinum-Toxin-Induced Muscle Fasciculations in Children with Cerebral Palsy: A Case-Series Study
by Giulia D’Amario, Giulia Brunozzi, Martina Procaccini, Marianna Villa, Chiara Monaco, Francesca Sini, Chiara Velli, Claudia Brogna and Domenico Marco Romeo
Brain Sci. 2025, 15(10), 1048; https://doi.org/10.3390/brainsci15101048 - 26 Sep 2025
Abstract
Cerebral palsy (CP) is a group of permanent, but not immutable, disorders of movement and posture caused by a non-progressive lesion or an abnormality in the development of the immature brain. It is the leading cause of motor disability in childhood. The most [...] Read more.
Cerebral palsy (CP) is a group of permanent, but not immutable, disorders of movement and posture caused by a non-progressive lesion or an abnormality in the development of the immature brain. It is the leading cause of motor disability in childhood. The most common sign is muscle spasticity, which leads to the development of contractures and bone deformities. Among the treatments for spasticity, botulinum toxin injection has the strongest scientific evidence and is used from the age of 2 years. In this article, we report three pediatric patients with CP who developed muscle fasciculations after botulinum toxin injection, which were administered according to planned dosages and required clinical monitoring and stretching by a healthcare professional. We review the literature and analyze the possible physiopathological mechanisms; however no other similar clinical cases have been reported. In conclusion, we propose to include muscle fasciculations as a potential transient and non-harmful adverse effect of botulinum toxin infiltration, which remains the treatment of choice for muscle spasticity when combined with rehabilitation in cerebral palsy. Full article
(This article belongs to the Section Neurorehabilitation)
10 pages, 6605 KB  
Case Report
Systemic CD3+ T-Cell Lymphoblastic Leukemia in a Bearded Dragon (Pogona vitticeps): Clinical, Therapeutic, and Pathological Findings
by Josip Miljković, Anouk Jonker, Dražen Đuričić, Danijela Horvatek Tomić, Maja Belić, Siniša Faraguna, Mirela Pavić Vulinović, Ana Shek Vugrovečki, Maja Lukač, Ivan-Conrado Šoštarić-Zuckermann and Iva Šmit
Animals 2025, 15(18), 2736; https://doi.org/10.3390/ani15182736 - 19 Sep 2025
Viewed by 206
Abstract
A three-year-old male bearded dragon (Pogona vitticeps) exhibited acute anorexia. Biochemistry revealed mild hyperproteinemia (88 g/L) and elevated liver enzymes (ALT 60 U/L, AST 272 U/L), while the hematology report showed marked lymphocytosis. The animal had been clinically normal at a [...] Read more.
A three-year-old male bearded dragon (Pogona vitticeps) exhibited acute anorexia. Biochemistry revealed mild hyperproteinemia (88 g/L) and elevated liver enzymes (ALT 60 U/L, AST 272 U/L), while the hematology report showed marked lymphocytosis. The animal had been clinically normal at a routine examination 10 months earlier. Based on the clinical and laboratory findings, acute lymphoblastic leukemia was suspected. Treatment was initiated with methylprednisolone (1 mg/kg PO q24h), marbofloxacin (10 mg/kg IM q24h), and lomustine (80 mg/m2 PO q14d), calculated according to reptile-specific body surface area formulas. A transient stabilization was followed by sudden deterioration on day 3, characterized by hematemesis and severe respiratory distress, leading to spontaneous death. A complete necropsy including histopathology and anti-CD3 immunohistochemistry revealed disseminated infiltration of neoplastic T-lymphocytes throughout all major visceral organs and confirmed the diagnosis of T-cell lymphoblastic lymphoma/leukemia (L/L). This case represents a rare report of systemic acute lymphoblastic L/L in a bearded dragon and underlies the importance of comprehensive diagnostics in reptiles with non-specific clinical signs and the challenges in the treatment of neoplastic diseases in exotic species. Full article
(This article belongs to the Section Herpetology)
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17 pages, 3324 KB  
Case Report
Lymphoid and Myeloid Proliferations After Chimeric Antigen Receptor (CAR) T-Cell Therapy: The Pathologist’s Perspective
by Jiehao Zhou and Katalin Kelemen
Int. J. Mol. Sci. 2025, 26(17), 8388; https://doi.org/10.3390/ijms26178388 - 28 Aug 2025
Viewed by 736
Abstract
Chimeric antigen receptor (CAR) T-cell infusion has led to improved outcomes in patients with B-lymphoblastic leukemia, B-cell lymphoma, and multiple myeloma. The spectrum of post-CAR T-cell hematolymphoid abnormalities is expanding, although they remain under-recognized. Pathologists play a key role in characterizing hematolymphoid proliferation [...] Read more.
Chimeric antigen receptor (CAR) T-cell infusion has led to improved outcomes in patients with B-lymphoblastic leukemia, B-cell lymphoma, and multiple myeloma. The spectrum of post-CAR T-cell hematolymphoid abnormalities is expanding, although they remain under-recognized. Pathologists play a key role in characterizing hematolymphoid proliferation after CAR T-cell therapy. This review presents clinical and pathologic findings of common hematolymphoid proliferation after CAR T-cell therapy, illustrated by selected cases. A review of the literature is presented in the context of individual cases, and our current understanding of the pathomechanism is discussed. Infused CAR T-cells undergo a series of four phases: distribution, expansion, contraction, and persistence. In the expansion phase, transient peripheral blood lymphocytosis occurs, reaching a peak two weeks post-infusion. Delayed contraction of CAR T-cells may give rise to hemophagocytic lymphohistiocytosis-like syndrome. Immune effector cell-associated enterocolitis presents in the persistence phase, about 3–6 months after infusion. Pathologic findings include a T-cell infiltrate in the intestinal mucosa and changes resembling graft versus host disease (GVHD). This entity requires differentiation from infections and from T-cell neoplasms, including those derived from CAR T-cells. Secondary myeloid malignancies follow the same pathways as therapy-related myeloid neoplasm but present with a shorter median latency. It is essential for pathologists to recognize post-CAR T-cell hematolymphoid proliferation to support clinical decision making in a high-risk patient population. Full article
(This article belongs to the Special Issue New Advances in Stem Cells in Human Health and Diseases)
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26 pages, 2797 KB  
Article
Heterogeneous Macrophage Activation in Acute Skeletal Muscle Sterile Injury and mdx5cv Model of Muscular Dystrophy
by Xingyu Wang, Justin K. Moy, Yinhang Wang, Gregory R. Smith, Frederique Ruf-Zamojski, Pawel F. Przytycki, Stuart C. Sealfon and Lan Zhou
Int. J. Mol. Sci. 2025, 26(16), 8098; https://doi.org/10.3390/ijms26168098 - 21 Aug 2025
Viewed by 878
Abstract
Monocytes/macrophages promote the repair of acutely injured muscle while contributing to dystrophic changes in chronically injured muscle in Duchenne muscular dystrophy (DMD) patients and animal models including mdx and mdx5cv mice. To elucidate the molecular mechanisms underlying this functional difference, we compared [...] Read more.
Monocytes/macrophages promote the repair of acutely injured muscle while contributing to dystrophic changes in chronically injured muscle in Duchenne muscular dystrophy (DMD) patients and animal models including mdx and mdx5cv mice. To elucidate the molecular mechanisms underlying this functional difference, we compared the transcriptomes of intramuscular monocytes/macrophages from wild-typed (WT) uninjured muscles, WT acutely injured muscles, and mdx5cv dystrophic muscles, using single cell-based RNA sequencing (scRNA-seq) analysis. Our study identified multiple transcriptomically diverse monocyte/macrophage subclusters, which appear to be induced by the intramuscular microenvironment. They expressed feature genes differentially involved in muscle inflammation, regeneration, and extracellular matrix (ECM) remodeling, but none of them conform to strict M1 or M2 activation. The Gpnmb+Spp1+ macrophage subcluster, an injury-associated subcluster that features the signature genes of reported scar-associated macrophages (SAMs) involved in ECM remodeling and fibrosis, is present transiently in acutely injured muscle and persistently in chronically injured dystrophic muscle, along with the persistence of monocytes. Our findings suggest that the persistent monocyte/macrophage infiltration and activation induced by continuous injury may underlie the pathogenic roles of macrophages in mdx5cv muscles. Controlling muscle injury and subsequent macrophage infiltration and activation may be important to the treatment of DMD. Full article
(This article belongs to the Section Molecular Immunology)
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16 pages, 20542 KB  
Article
Establishment of Agrobacterium-Mediated Transient Transformation System in Sunflower
by Fangyuan Chen, Lai Wang, Qixiu Huang, Run Jiang, Wenhui Li, Xianfei Hou, Zihan Tan, Zhonghua Lei, Qiang Li and Youling Zeng
Plants 2025, 14(15), 2412; https://doi.org/10.3390/plants14152412 - 4 Aug 2025
Viewed by 593
Abstract
Sunflower (Helianthus annuus L.) is an important oilseed crop in Northwest China, exhibiting resistance to salt and drought. Mining its excellent tolerance genes can be used for breeding. However, the current platforms for identifying gene function in sunflower is inadequate. The transient [...] Read more.
Sunflower (Helianthus annuus L.) is an important oilseed crop in Northwest China, exhibiting resistance to salt and drought. Mining its excellent tolerance genes can be used for breeding. However, the current platforms for identifying gene function in sunflower is inadequate. The transient transformation system, which can rapidly validate gene function, shows promising prospects in research. In this study, we established an efficient transient expression transformation system for sunflower using three methods: Agrobacterium-mediated infiltration, injection, and ultrasonic-vacuum. The detailed procedures were as follows: Agrobacterium GV3101 carrying a GUS reporter gene on the pBI121 vector with an OD600 of 0.8 as the bacterial suspension and 0.02% Silwet L-77 as the surfactant were utilized in all three approaches. For the infiltration method, seedlings grown hydroponically for 3 days were immersed in a bacterial suspension containing 0.02% Silwet L-77 for 2 h; for the injection method, the same solution was injected into the cotyledons of seedlings grown in soil for 4 to 6 days. Subsequently, the seedlings were cultured in the dark at room temperature for three days; for the ultrasonic-vacuum method, seedlings cultured in Petri dishes for 3 days were first subjected to ultrasonication at 40 kHz for 1 min, followed by vacuum infiltration at 0.05 kPa for 5–10 min. Agrobacterium-mediated transient transformation efficiency achieved by the three methods exceeded 90%, with gene expression being sustained for at least 6 days. Next, we employed the infiltration-based sunflower transient transformation technology with the Arabidopsis stable transformation platform to confirm salt and drought stress tolerance of candidate gene HaNAC76 from sunflower responding to various abiotic stresses. Altogether, this study successfully established an Agrobacterium-mediated transient transformation system for sunflower using these three methods, which can rapidly identify gene function and explore the molecular mechanisms underlying sunflower’s resistance traits. Full article
(This article belongs to the Section Plant Cell Biology)
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20 pages, 7363 KB  
Article
Numerical Simulation Study of Rainfall-Induced Saturated–Unsaturated Landslide Instability and Failure
by Zhuolin Wu, Gang Yang, Wen Li, Xiangling Chen, Fei Liu and Yong Zheng
Water 2025, 17(15), 2229; https://doi.org/10.3390/w17152229 - 26 Jul 2025
Viewed by 726
Abstract
Rainfall infiltration is a key factor affecting the stability of the slope. To study the impact of rainfall on the instability mechanism and stability of slopes, this paper employs numerical simulation to establish a rainfall infiltration slope model and conducts a saturated–unsaturated slope [...] Read more.
Rainfall infiltration is a key factor affecting the stability of the slope. To study the impact of rainfall on the instability mechanism and stability of slopes, this paper employs numerical simulation to establish a rainfall infiltration slope model and conducts a saturated–unsaturated slope flow and solid coupling numerical analysis. By combining the strength reduction method with the calculation of slope stability under rainfall infiltration, the safety factor of the slope is obtained. A comprehensive analysis is conducted from the perspectives of the seepage field, displacement field and other factors to examine the impact of heavy rainfall patterns and rainfall intensities on the instability mechanism and stability of the slope. The results indicate that heavy rainfall causes the transient saturation zone within the landslide body to continuously move upward, forming a continuous sliding surface inside the slope, which may lead to instability and sliding of the soil in the upper part of the slope toe. The heavy rainfall patterns significantly affect the temporal and spatial evolution of pore water pressure, displacement and safety factors of the slope. Pore water pressure and displacement show a positive correlation with the rainfall intensity at various times during heavy rainfall events. The pre-peak rainfall pattern causes the largest decrease in the safety factor of the slope, and the slope failure occurs earlier, which is the most detrimental to the stability of the slope. The rainfall intensity is inversely proportional to the safety factor. As the rainfall intensity increases, the decrease in the slope’s safety factor becomes more significant, and the time required for slope instability is also shortened. The results of this study provide a scientific basis for analyzing rainfall-induced slope instability and failure. Full article
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18 pages, 2650 KB  
Article
Prevention of Metabolic Impairment by Dietary Nitrate in Overweight Male Mice Improves Stroke Outcome
by Ellen Vercalsteren, Dimitra Karampatsi, Carolina Buizza, Gesine Paul, Jon O. Lundberg, Thomas Nyström, Vladimer Darsalia and Cesare Patrone
Nutrients 2025, 17(15), 2434; https://doi.org/10.3390/nu17152434 - 25 Jul 2025
Viewed by 592
Abstract
Background/objectives: Being overweight increases the predisposition to obesity and type 2 diabetes (T2D), which significantly elevate stroke risk and the likelihood of severe post-stroke disability. Dietary nitrate (NO3) supplementation can mitigate obesity and metabolic impairments, making it a promising [...] Read more.
Background/objectives: Being overweight increases the predisposition to obesity and type 2 diabetes (T2D), which significantly elevate stroke risk and the likelihood of severe post-stroke disability. Dietary nitrate (NO3) supplementation can mitigate obesity and metabolic impairments, making it a promising approach to halt overweight people from developing overt obesity/T2D, thereby potentially also improving stroke outcome. We determined whether NO3 supplementation prevents overweight mice from progressing into obesity and T2D and whether this intervention improves stroke outcome. Methods: An overweight condition was induced via 6 weeks of a high-fat diet (HFD), after which animals were randomized to either a HFD or a HFD with NO3 supplementation. After 24 weeks, when HFD-mice without NO3 developed obesity and T2D, all animals were subjected to transient middle cerebral artery occlusion and stroke outcome was assessed via behavioral testing and infarct size. The effect of NO3 on post-stroke neuroinflammation, neurogenesis, and neovascularization was analyzed by immunohistochemistry. Results: Sustained NO3 supplementation in overweight mice did not prevent obesity or insulin resistance. However, it attenuated weight gain, prevented hyperglycemia, and significantly improved functional recovery after stroke, without affecting infarct size. Moreover, NO3 decreased post-stroke neuroinflammation by reducing microglial infiltration. NO3 did not affect stroke-induced neurogenesis or vascularization. Conclusion: These results highlight the potential of NO3 supplementation to prevent metabolic impairment in the overweight population and improve stroke prognosis in this large group of people at risk of stroke and severe stroke sequelae. Full article
(This article belongs to the Section Nutrition and Metabolism)
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15 pages, 1078 KB  
Review
Immunological Insights into Photodynamic Therapy of Glioblastoma Multiforme
by Paweł Woźnicki, Dorota Bartusik-Aebisher, Agnieszka Przygórzewska and David Aebisher
Molecules 2025, 30(15), 3091; https://doi.org/10.3390/molecules30153091 - 24 Jul 2025
Viewed by 699
Abstract
The Gliomas account for 81% of all malignant central nervous system tumors and are classified by WHO into four grades of malignancy. Glioblastoma multiforme (GBM), the most common grade IV glioma, exhibits an extremely aggressive phenotype and a dismal five-year survival rate of [...] Read more.
The Gliomas account for 81% of all malignant central nervous system tumors and are classified by WHO into four grades of malignancy. Glioblastoma multiforme (GBM), the most common grade IV glioma, exhibits an extremely aggressive phenotype and a dismal five-year survival rate of only 6%, underscoring the urgent need for novel therapeutic approaches. Immunotherapy has emerged as a promising strategy, and photodynamic therapy (PDT) in particular has attracted attention for its dual cytotoxic and immunostimulatory effects. In GBM models, PDT induces immunogenic cell death characterized by the release of damage-associated molecular patterns (DAMPs), which promote antigen presentation and activate T cell responses. Additionally, PDT transiently increases blood–brain barrier permeability, facilitating immune cell infiltration into the tumor microenvironment, and enhances clearance of waste products via stimulation of meningeal lymphatic vessels. Importantly, PDT can reprogram or inactivate immunosuppressive tumor-associated macrophages, thereby counteracting the pro-tumoral microenvironment. Despite these encouraging findings, further preclinical and clinical studies are required to elucidate PDT’s underlying immunological mechanisms fully and to optimize treatment regimens that maximize its efficacy as part of integrated immunotherapeutic strategies against GBM. Full article
(This article belongs to the Special Issue Innovative Anticancer Compounds and Therapeutic Strategies)
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22 pages, 4496 KB  
Article
Non-Isothermal Process of Liquid Transfer Molding: Transient 3D Simulations of Fluid Flow Through a Porous Preform Including a Sink Term
by João V. N. Sousa, João M. P. Q. Delgado, Ricardo S. Gomez, Hortência L. F. Magalhães, Felipe S. Lima, Glauco R. F. Brito, Railson M. N. Alves, Fernando F. Vieira, Márcia R. Luiz, Ivonete B. Santos, Stephane K. B. M. Silva and Antonio G. B. Lima
J. Manuf. Mater. Process. 2025, 9(7), 243; https://doi.org/10.3390/jmmp9070243 - 18 Jul 2025
Viewed by 664
Abstract
Resin Transfer Molding (RTM) is a widely used composite manufacturing process where liquid resin is injected into a closed mold filled with a fibrous preform. By applying this process, large pieces with complex shapes can be produced on an industrial scale, presenting excellent [...] Read more.
Resin Transfer Molding (RTM) is a widely used composite manufacturing process where liquid resin is injected into a closed mold filled with a fibrous preform. By applying this process, large pieces with complex shapes can be produced on an industrial scale, presenting excellent properties and quality. A true physical phenomenon occurring in the RTM process, especially when using vegetable fibers, is related to the absorption of resin by the fiber during the infiltration process. The real effect is related to the slowdown in the advance of the fluid flow front, increasing the mold filling time. This phenomenon is little explored in the literature, especially for non-isothermal conditions. In this sense, this paper does a numerical study of the liquid injection process in a closed and heated mold. The proposed mathematical modeling considers the radial, three-dimensional, and transient flow, variable injection pressure, and fluid viscosity, including the effect of liquid fluid absorption by the reinforcement (fiber). Simulations were carried out using Computational Fluid Dynamic tools. The numerical results of the filling time were compared with experimental results, and a good approximation was obtained. Further, the pressure, temperature, velocity, and volumetric fraction fields, as well as the transient history of the fluid front position and injection fluid volumetric flow rate, are presented and analyzed. Full article
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54 pages, 2627 KB  
Review
Calcium Signaling Dynamics in Vascular Cells and Their Dysregulation in Vascular Disease
by Chang Dai and Raouf A. Khalil
Biomolecules 2025, 15(6), 892; https://doi.org/10.3390/biom15060892 - 18 Jun 2025
Cited by 5 | Viewed by 2369
Abstract
Calcium (Ca2+) signaling is a fundamental regulatory mechanism controlling essential processes in the endothelium, vascular smooth muscle cells (VSMCs), and the extracellular matrix (ECM), including maintaining the endothelial barrier, modulation of vascular tone, and vascular remodeling. Cytosolic free Ca2+ concentration [...] Read more.
Calcium (Ca2+) signaling is a fundamental regulatory mechanism controlling essential processes in the endothelium, vascular smooth muscle cells (VSMCs), and the extracellular matrix (ECM), including maintaining the endothelial barrier, modulation of vascular tone, and vascular remodeling. Cytosolic free Ca2+ concentration is tightly regulated by a balance between Ca2+ mobilization mechanisms, including Ca2+ release from the intracellular stores in the sarcoplasmic/endoplasmic reticulum and Ca2+ entry via voltage-dependent, transient-receptor potential, and store-operated Ca2+ channels, and Ca2+ elimination pathways including Ca2+ extrusion by the plasma membrane Ca2+-ATPase and Na+/Ca2+ exchanger and Ca2+ re-uptake by the sarco(endo)plasmic reticulum Ca2+-ATPase and the mitochondria. Some cell membranes/organelles are multifunctional and have both Ca2+ mobilization and Ca2+ removal pathways. Also, the individual Ca2+ handling pathways could be integrated to function in a regenerative, capacitative, cooperative, bidirectional, or reciprocal feed-forward or feed-back manner. Disruption of these pathways causes dysregulation of the Ca2+ signaling dynamics and leads to pathological cardiovascular conditions such as hypertension, coronary artery disease, atherosclerosis, and vascular calcification. In the endothelium, dysregulated Ca2+ signaling impairs nitric oxide production, reduces vasodilatory capacity, and increases vascular permeability. In VSMCs, Ca2+-dependent phosphorylation of the myosin light chain and Ca2+ sensitization by protein kinase-C (PKC) and Rho-kinase (ROCK) increase vascular tone and could lead to increased blood pressure and hypertension. Ca2+ activation of matrix metalloproteinases causes collagen/elastin imbalance and promotes vascular remodeling. Ca2+-dependent immune cell activation, leukocyte infiltration, and cholesterol accumulation by macrophages promote foam cell formation and atherosclerotic plaque progression. Chronic increases in VSMCs Ca2+ promote phenotypic switching to mesenchymal cells and osteogenic transformation and thereby accelerate vascular calcification and plaque instability. Emerging therapeutic strategies targeting these Ca2+-dependent mechanisms, including Ca2+ channel blockers and PKC and ROCK inhibitors, hold promise for restoring Ca2+ homeostasis and mitigating vascular disease progression. Full article
(This article belongs to the Special Issue Calcium Signaling in Cell Function and Dysfunction)
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16 pages, 5767 KB  
Article
bTRM Control of Murine Cytomegalovirus CNS Reactivation
by Priyanka Chauhan, Shuxian Hu, Wen S. Sheng, Sujata Prasad and James R. Lokensgard
Int. J. Mol. Sci. 2025, 26(11), 5275; https://doi.org/10.3390/ijms26115275 - 30 May 2025
Viewed by 758
Abstract
T lymphocytes infiltrate the CNS in response to murine cytomegalovirus (MCMV) infection and form a pool of long-lived brain tissue-resident memory T-cells (bTRMs), which display markers of residency (i.e., CD103, CD69, CD49a). However, the functional role of these bTRMs [...] Read more.
T lymphocytes infiltrate the CNS in response to murine cytomegalovirus (MCMV) infection and form a pool of long-lived brain tissue-resident memory T-cells (bTRMs), which display markers of residency (i.e., CD103, CD69, CD49a). However, the functional role of these bTRMs is still unknown. By 30 days postinfection, a latent viral brain infection was established, as indicated by absence of viral transcripts (IE1, E1, and gB) produced during productive infection. Following intracerebroventricular injection of either depleting α-CD8 Ab (clone YTS169.4) or α-CD103-sap (clone IT50) into the brain, 90–95% T-cell depletion was achieved. Using luciferase-expressing mice, we observed recommenced imaging signals indicative of de novo MCMV IE promoter activity in depleted animals. Surprisingly, using an explant assay, we efficiently recovered reactivatable, infectious virus from untreated, latent animals, but not from those depleted of bTRMs (viral recovery in explants was reduced from 100% to 50% by day 21). We identified Lgals3 (galectin 3), Gpnmb (glycoprotein nonmetastatic melanoma protein B) and Hmox1 (heme oxygenase 1) as genes that were most upregulated in bTRM-depleted groups. When bTRMs were depleted, there was transient expression of viral IE genes which resulted in antiviral microglia with a phagocytic, disease-associated (DAM) or neurodegenerative (MGnD) phenotype. These data provide new insights into the role of bTRMs in controlling both CNS reactivation and driving microglial phenotypes. Full article
(This article belongs to the Section Molecular Microbiology)
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27 pages, 4372 KB  
Article
Uncertainty Analysis and Quantification of Rainfall-Induced Slope Instability in Fine-Grained Clayey Soils
by Samuel A. Espinosa Fuentes and M. Hesham El Naggar
Geotechnics 2025, 5(2), 31; https://doi.org/10.3390/geotechnics5020031 - 21 May 2025
Cited by 1 | Viewed by 1598
Abstract
This study investigates rainfall-induced slope instability in fine-grained clayey soils through a probabilistic and sensitivity analysis framework that integrates spatial variability. Moving beyond traditional deterministic methods, Monte Carlo simulations were employed to quantify uncertainty in geotechnical parameters—unit weight, cohesion, and friction angle—modeled as [...] Read more.
This study investigates rainfall-induced slope instability in fine-grained clayey soils through a probabilistic and sensitivity analysis framework that integrates spatial variability. Moving beyond traditional deterministic methods, Monte Carlo simulations were employed to quantify uncertainty in geotechnical parameters—unit weight, cohesion, and friction angle—modeled as random fields with a 1 m spatial resolution. This approach realistically captures natural soil heterogeneity and its influence on slope behavior during rainfall events. Transient seepage and slope stability analyses were performed using SEEP/W and SLOPE/W, respectively, with the Spencer method ensuring full equilibrium. This study examined how slope height, inclination, rainfall intensity and duration, and soil properties affect the factor of safety (FS). The results showed that higher rainfall intensity and longer durations significantly increase failure risk. For example, under 9 mm/h rainfall for 48 h, slopes taller than 10 m at 45° inclination exhibited failure probabilities over 30%. At 20 m, FS dropped to 0.68 with a 100% probability of failure. Sensitivity analysis confirmed cohesion and friction angle as key stabilizing factors, though their impact diminishes with infiltration. A dataset of 9984 slope scenarios was generated, supporting future machine learning applications for risk assessment and climate-resilient slope design. Full article
(This article belongs to the Special Issue Recent Advances in Geotechnical Engineering (2nd Edition))
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18 pages, 4677 KB  
Article
CsCBDAS2-Driven Enhancement of Cannabinoid Biosynthetic Genes Using a High-Efficiency Transient Transformation System in Cannabis sativa ‘Cheungsam’
by Sang-Cheol Baek, Sang-Yoon Jeon, Bo-Hyun Byun, Da-Hoon Kim, Ga-Ram Yu, Hyuck Kim and Dong-Woo Lim
Plants 2025, 14(10), 1460; https://doi.org/10.3390/plants14101460 - 14 May 2025
Viewed by 845
Abstract
Cannabis sativa produces pharmacologically valuable cannabinoids. In this study, we developed and optimized a transient transformation system using Cannabis sativa ‘Cheungsam’ to facilitate gene functional analysis. Various experimental conditions, including plant developmental stages, light conditions, Agrobacterium strains, tissue types, and physical treatments such [...] Read more.
Cannabis sativa produces pharmacologically valuable cannabinoids. In this study, we developed and optimized a transient transformation system using Cannabis sativa ‘Cheungsam’ to facilitate gene functional analysis. Various experimental conditions, including plant developmental stages, light conditions, Agrobacterium strains, tissue types, and physical treatments such as sonication and vacuum infiltration, were systematically evaluated using GUS histochemical staining and qPCR analysis. Among these, 7-day-old seedlings cultured under dark conditions and transformed with the GV3101 strain exhibited high transformation efficiency. Leaf tissue showed a higher GUS staining proportion and GUS staining area compared to hypocotyl and cotyledon tissues. The application of a combination of sonication and vacuum infiltration techniques resulted in the most intense GUS expression. Using the optimized protocol, we introduced a recombinant vector carrying CsCBDAS2, a key gene in cannabidiol (CBD) biosynthesis. qPCR analysis revealed that CsCBDAS2 overexpression led to significant upregulation of multiple upstream CBD biosynthetic genes (CsOAC, CsGOT, CsPT1, CsPT4, CsCBDAS1, and CsCBDAS2) and the transcription factor (TF) CsWRKY20, suggesting coordinated co-expression and potential involvement of a transcriptional feedback loop. These results demonstrate the effectiveness of our transient transformation system and provide insights into the regulatory mechanisms of cannabinoid biosynthesis in cannabis. Full article
(This article belongs to the Special Issue Plant Tissue Culture V)
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18 pages, 1964 KB  
Article
Efficient Agrobacterium-Mediated Methods for Transient and Stable Transformation in Common and Tartary Buckwheat
by Sara Leite Dias, Paride Rizzo, John Charles D’Auria and Andriy Kochevenko
Int. J. Mol. Sci. 2025, 26(9), 4425; https://doi.org/10.3390/ijms26094425 - 6 May 2025
Viewed by 1408
Abstract
Buckwheat is a promising crop with grains that are rich in nutrients and bioactive compounds. Genome sequence data for common and Tartary buckwheat have recently become available. Currently, there is a critical need for the development of a simple and reliable transient gene [...] Read more.
Buckwheat is a promising crop with grains that are rich in nutrients and bioactive compounds. Genome sequence data for common and Tartary buckwheat have recently become available. Currently, there is a critical need for the development of a simple and reliable transient gene expression protocol, as well as a stable genetic transformation method, to facilitate metabolic engineering of bioactive compounds, functional analysis of genes, targeted editing, and, in a long-term perspective, to accelerate the breeding process in buckwheat. In this paper, we report optimized methods for Agrobacterium-mediated transient and stable transformation of Fagopyrum esculentum and F. tartaricum. Leaf and cotyledon tissues were infiltrated with an A. tumefaciens-bearing construct containing eGFP and GUS reporter genes. Histochemical staining and Western blotting were used to confirm the expression of reporter proteins. We also demonstrate the usefulness of the developed method for engineering the gramine biosynthetic pathway in buckwheat. HvAMIS and HvNMT genes were transiently expressed in buckwheat leaves, and the de novo production of gramine was confirmed by LC-MS. Moreover, in planta genetic transformation of common and Tartary buckwheat with a reporter gene (eGFP) and selectable marker gene (NptII) was achieved by Agrobacterium-mediated vacuum infiltration. Genomic integration of the construct was confirmed by polymerase chain reaction (PCR), whereas the production of eGFP was confirmed by fluorescence microscopy. Full article
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15 pages, 3811 KB  
Article
Rainfall-Induced Slope Instability in Tropical Regions Under Climate Change Scenarios
by Rajendra Kumar P, Kasinathan Muthukkumaran, Chetan Sharma, Anoop Kumar Shukla and Surendra Kumar Sharma
Water 2025, 17(9), 1392; https://doi.org/10.3390/w17091392 - 6 May 2025
Viewed by 1062
Abstract
The reduction in the stability of rock slopes due to rainfall is a significant issue in tropical regions. Unsaturated soil, commonly found on hill slopes, provides higher shear strength compared to saturated soil due to matric suction. Soil moisture plays a crucial role [...] Read more.
The reduction in the stability of rock slopes due to rainfall is a significant issue in tropical regions. Unsaturated soil, commonly found on hill slopes, provides higher shear strength compared to saturated soil due to matric suction. Soil moisture plays a crucial role in determining slope stability during rainfall events, yet it is often overlooked in geotechnical engineering projects. This study integrates both steady-state and transient analyses to examine how rainfall intensity affects the stability of a rock slope near a tunnel portal. Transient seepage analysis was conducted using SEEP/W to simulate changes in pore water pressure (PWP) resulting from rainfall infiltration under historical and future precipitation conditions. The analysis considers medium (SSP245) and worst-case (SSP585) climate change scenarios as per Coupled Model Intercomparison Project Phase 6 (CMIP6). The findings underscore the significant impact of rainfall-induced infiltration on slope stability and highlight the importance of incorporating soil moisture dynamics in slope stability assessments. The safety factor, initially 1.54 before accounting for rainfall effects, decreases to 1.34 when the effects of rainfall are included. Full article
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