Next Article in Journal
Expression of TXNIP in Cancer Cells and Regulation by 1,25(OH)2D3: Is It Really the Vitamin D3 Upregulated Protein?
Next Article in Special Issue
Seed Hydropriming and Smoke Water Significantly Improve Low-Temperature Germination of Lupinus angustifolius L.
Previous Article in Journal
Transcriptome Analysis of a Premature Leaf Senescence Mutant of Common Wheat (Triticum aestivum L.)
Previous Article in Special Issue
Evolution and Stress Responses of Gossypium hirsutum SWEET Genes
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Review

Key Hormonal Components Regulate Agronomically Important Traits in Barley

1
Department of Genetics, Faculty of Biology and Environmental Protection, University of Silesia, 40-032 Katowice, Poland
2
Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466 Stadt, Seeland, Germany
3
Research Group Resources Genetics and Reproduction, Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466 Stadt, Seeland, Germany
*
Authors to whom correspondence should be addressed.
Int. J. Mol. Sci. 2018, 19(3), 795; https://doi.org/10.3390/ijms19030795
Submission received: 21 February 2018 / Revised: 6 March 2018 / Accepted: 7 March 2018 / Published: 10 March 2018

Abstract

:
The development and growth of plant organs is regulated by phytohormones, which constitute an important area of plant science. The last decade has seen a rapid increase in the unravelling of the pathways by which phytohormones exert their influence. Phytohormones function as signalling molecules that interact through a complex network to control development traits. They integrate metabolic and developmental events and regulate plant responses to biotic and abiotic stress factors. As such, they influence the yield and quality of crops. Recent studies on barley have emphasised the importance of phytohormones in promoting agronomically important traits such as tillering, plant height, leaf blade area and spike/spikelet development. Understanding the mechanisms of how phytohormones interact may help to modify barley architecture and thereby improve its adaptation and yield. To achieve this goal, extensive functional validation analyses are necessary to better understand the complex dynamics of phytohormone interactions and phytohormone networks that underlie the biological processes. The present review summarises the current knowledge on the crosstalk between phytohormones and their roles in barley development. Furthermore, an overview of how phytohormone modulation may help to improve barley plant architecture is also provided.

Graphical Abstract

1. Introduction

Manipulating the architecture of agronomic traits in cereals has a clear impact on plant adaptation to changing environmental conditions and improvement of the grain yield. Currently, much research is being directed towards the genetic dissection of the architecture and yield of plants so that targeted traits can be achieved more efficiently. Climate change and a growing human population demand that new crop varieties have to be better adapted to the local environmental conditions, while still producing sufficient high-quality yields [1]. The aim of the crop ideotype concepts that were proposed during the 1960s and 1970s was to enhance grain yield by modifying crop architectural traits through cereal breeding programmes [2]. The concept of ideotypes in breeding programmes is based on understanding the morphological, anatomical, and genetic traits and using this knowledge to develop plants that will produce enhanced grain yields under specified conditions [2]. The most important factors that define an ideotype are spike architecture, plant height, the number of fertile tillers, leaf blade area and phase duration [3], all of which are controlled by phytohormones (Figure 1). One of the first proposed barley ideotypes indicated that under constant drought stress, the ratio between the vegetative and generative periods and a smaller leaf area were crucial traits, whereas under water-sufficient conditions, the canopy profile was one of the most important traits influencing grain yield [4]. Because of climate change, increasing consumption and changes in human diets, crop ideotypes need constant improvement [1,5]. The greatest challenge in barley ideotypes is to select a targeted trait that is both heritable and that can be adjusted for a specific environment.
Most of what we know about the role of phytohormones in the growth and development of Hordeum vulgare L. (barley) is based on research from other grass species such as Oryza sativa L. [6] and Zea mays L. (maize) [7,8]. However, recent studies have identified a large set of genes that play a crucial role in the biosynthesis and/or signalling cascades of hormones, such as brassinosteroids (BRs), cytokinins (CKs), gibberellins (GAs) and strigolactones (SLs) [9,10,11]. These results permit the key hormonal components that regulate the shoot and spike architecture in barley to be predicted.
A powerful tool that is used to analyse and identify the genetic factors that control the complex architectural traits at a population level is the so-called genome-wide association studies (GWAS). GWAS has become a widely accepted approach in the study of plants. Basically, it detects associations between genotypic variations and differences in phenotypes for a given population using the appropriate statistical model. During the past few years, GWAS has enabled scientists to produce high-resolution genetic maps of several large-genome crops that have facilitated the identification of the genes that underlie the natural phenotypic variation of agronomic–architectural traits. In barley, GWAS has been used to identify single nucleotide polymorphism (SNP) markers that are associated with the root architecture [12], tillering [10], plant height [10], leaf area [11,13,14] and spike architecture [9,15]. Moreover, GWAS has also shown great potential to unravel the genetic background of architectural traits of other crop plants [6,16]. Alqudah et al. found that many of the QTL (quantitative trait loci) were precisely associated with known plant stature-related phytohormone genes, such as leaf area, tillering and plant height [10,11]. Therefore, using such a robust approach can help answer genetic and biological questions about complex traits, for instance, to discover the phytohormone genes that underlie agronomic traits.
Recent studies have indicated that the most important traits related to increased grain yield in barley include: (1) an extended phase critical for spike development, including increasing the number of spikelets and increasing spikelet survival, (2) a higher water-use efficiency and (3) abiotic stress tolerance, which is related to (4) a greater maximum root depth [3]. Here, we review the recent advances in understanding the molecular mechanisms of phytohormones in the architecture and yield of barley.

2. Hormonal Regulation of Agronomically Important Traits in Barley

2.1. Roles of Phytohormones in Plant Height

Combined breeding, genetic and physiological approaches have demonstrated the importance of hormones in improving plant stature, adaptation and yield. A well-known example is the reduction in plant height during the Green Revolution in order to increase lodging resistance and limit yield [17]. Three main hormonal players regulate plant height: BRs, GAs and SLs. In barley, disorders in the biosynthesis or signalling pathways of these hormones, which result in lower production or insensitivity to a hormone that is produced, leads to dwarf or semi-dwarf forms [18,19]. Because GAs promote both cell proliferation and cell division, mutants with a decreased production of GAs or that are insensitive to GAs have shorter culms [20]. BRs also increase cell elongation and it has been postulated that they regulate cell growth, i.e., via the promotion of GA accumulation in rice [21]. However, in the case of mutants with deficient SL biosynthesis or reduced signalling during growth, this might not only be related to the larger number of outgrowing tillers. Additionally, a positive effect of SL on the number of cells has been observed and it has been proven that SLs stimulate internode elongation independently of GAs [22]. Mutants with short culms have already been used successfully in breeding programmes of barley, wheat and rice [23,24,25]. However, in the rush to adapt modern crop plants to changing environmental conditions, the demand for new dwarfing alleles remains unabated. One reason is the fact that the phenotypic effect of some alleles may depend on the environmental conditions. Although it was shown for one of the HvBRI1 alleles (uzu) that a higher temperature (26 °C) resulted in a more drastic dwarf phenotype compared with a lower temperature (14 °C), this effect has not been observed for the other known alleles of HvBRI1 [19]. Among the QTL for plant height in barley that have recently been identified, one that is involved in BR biosynthesis, DWARF4 (HvD4) (Table 1) [10], has not yet been described for this species [19]. The other gene HvCPD, which encodes the protein that is involved in BR biosynthesis, was previously characterised in barley. A mutation in HvCPD results in a semi-dwarf phenotype of the mutant [19] but no information about any additional effects of this mutation, i.e., on tillering or leaf area, has been described.

2.2. The Role of Phytohormones in Tillering

One of the most important traits that have an influence on yield in cereals is the number of fertile tillers, which is controlled by environmental, genetic and hormonal factors. Recently, significant progress has been made in uncovering the hormonal regulation of shoot branching in grasses [26,27]. For a long time, auxin (IAA) [28] and CKs [29] were considered to be key components in regulating tillering. In cereals such as rice, polar export of IAA from axillary buds is necessary to promote bud outgrowth and local treatment with IAA inhibits tillering and decreases the level of CKs [30]. CKs are positive regulators of branching that act antagonistically to IAA and promote tiller bud outgrowth in barley [29] and rice [31]. With the discovery of the negative role of SLs in regulating the tiller number in highly branching mutants in rice, it became clear that besides IAA and CKs, SLs represent a third class of hormones that regulate the tiller number [32]. A recently identified barley mutant in the SL receptor confirmed that SLs inhibit the export of IAA from tiller buds, thus preventing tiller outgrowth [18]. GWAS studies have revealed that a hitherto functionally unknown gene in the QTL for tillering in barley—HvD10—encodes carotenoid-cleavage dioxygenase, which is involved in SL biosynthesis [33]. Based on observations in rice [34] and barley [35], GAs have also been hypothesised to regulate branching. Studies in rice have shown that GAs regulate the biosynthesis of SLs [36], thus indicating that both hormone classes may act together in tillering regulation [37]. This hypothesis was confirmed by a GWAS analysis showing that the group of genes that is associated with tillering is dominated by those that are involved in GA biosynthesis and signalling (Table 1) [10]. The role of BRs in tillering in cereals remains unclear. While Tong et al. [38] reported that elevated BR levels are related to a lower number of tillers in rice, Wu et al. [39] found a positive correlation between the expression of the genes that are involved in BR biosynthesis and increased tillering. A decrease in the tiller number was also found in the barley BR-insensitive mutant uzu [40], but this effect was not observed in the mutant allelic to uzu [41] and other BR mutants in barley [19]. Interestingly, the genes encoding the proteins for BR biosynthesis and signalling pathways comprise the second largest group that is associated with tillering in GWAS studies (Table 1) [10]. A more detailed analysis of individual mutants in relation to tillering is necessary in order to answer the questions about the role of BRs in this developmental process.

2.3. Phytohormone Regulation of Spike and Spikelet Development and Fertility

Phytohormones are closely linked with the transition phase and organ development, especially during the reproductive phase, for instance, the development of spikelets and the floral organs. Spike development is mainly influenced by GAs since treatment with GAs accelerates spike development in wheat and induces the expression of the floral meristem identity genes [42]. When wheat plants are transferred from short- to long-day conditions, the genes that are involved in GA biosynthesis become upregulated in the apices [43]. REDUCED HEIGHT (RHT), one of the genes used during the Green Revolution, encodes a protein from the DELLA family, which are negative regulators of GA signalling. A gain-of-function mutation in RHT not only results in a semi-dwarf phenotype but also an increase in spikelet fertility [44]. GAs promote heading in spring barley, which demonstrates the importance of GAs in adaptation and yield improvement through reducing plant height and improving lodging resistance, which are correlated with higher yields and quality traits [45]. It has long been hypothesised that other hormones also play important roles in spike and spikelet/floret development. Wang et al. [46] reported on the effects of hormones injected into the leaf sheath around young spikes on wheat floret development and grain set. Whereas the injection of CKs promoted the development of wheat florets, thus increasing the number of fertile florets and the grain set, injections of IAA, GAs and abscisic acid (ABA) inhibited floret development [46]. Zheng et al. [47] found that wheat floret development and grain setting were improved by applying synthetic CKs (6-benzylaminopurine, 6-BA). In rice, GAs and kinetin (6-furfuryl amino purine) enhanced spikelet growth and development and increased the grain yield on all rice branches, while IAA influenced only the distal branches [48]. The endogenous hormone levels in wheat are stage dependent. In the spike and anther developmental phases, the level of ABA and GAs is decreased, which might improve fertile florets and grain set [49,50]. Recently, it was shown that the gradients of IAA and CKs are not distributed homogeneously during spikelet development in barley. While the concentration of IAA is highest in the basal region, declining towards the apical region, the concentration of CKs display a reverse gradient, declining towards the basal region [9]. In plants carrying a mutation in the Six-rowed spike2 (vrs2.e) encoding SHORT INTERNODES (SHI) transcription factor, IAA and CK gradients are absent and spike development is disordered. Spikes of wild-type plants also have a higher concentration of GAs than the vrs2.e mutants, where it has a role in shaping the spike architecture by controlling spikelet development and fertility [9]. In rice, Cai et al. [51] discovered the role of jasmonic acid (JA) in regulating the determinacy of rice floral meristem and spikelet morphogenesis. Extra Glume 1 (EG1) and EG2 mutants show changes in spikelet morphology as well as the floral organ identity and number (Table 2). EG1 acts in JA biosynthesis and EG2 is a JA signalling repressor that produces a defective floral meristem determinacy (Table 2). The role of phytohormones in spikelet development and fertility might be applicable to other grasses. Such work provides the basis for improving crop yield. Therefore, whether hormonal patterns are the cause or the consequence of spikelet fertility in cereal spikes remain to be explored (Figure 2).
Alqudah and Schnurbusch [52] found that the phase between the emergence of awn primordium and awn tipping is the most critical phase for spikelet abortion where anthesis or fertilisation occurs [53]. It is a critical yield-determining trait that is genetically controlled and is influenced by environmental factors [52]. Therefore, proper development of the floral organs such as the anther during this phase is essential for improving spikelet survival. Phytohormones play an important role in regulating the development of the floral meristem. Thus, understanding how a phytohormone regulates spikelet development and fertility is crucial for improving grain yield. Studies in rice have shown how unregulated GA signalling leads to defects in the formation and development of the floral organs that in turn increase the sterility of spikelets. The DELLA protein Slender rice 1 (SLR1) acts as a negative regulator of downstream genes in GA signalling and plays a key role in the development of the floral organs (Table 2), where a deficiency of SLR1 causes spikelet fertility phenotypes [54]. For instance, although a gain-of-function in an Slr1-d3 mutant produces normal pistils and stamens, semi-fertile phenotypes are caused by a low pollen viability [54]. Loss-of-function in the SLR1 mutant slr1-1 clearly shows sterile phenotypes [55].
In addition, the GA-insensitive rice mutant gid1-4 displays an abnormality in the development of organs during anther development [59], thus indicating that GID1 is necessary for the structure of the anthers. The mutants of EG1 and EG2 (i.e., eg1-3 and eg2-1D), which are involved in JA biosynthesis and signalling, show defects in the spikelet organ. For example, the mutants develop extra glume-like structures, the palea exhibit lemma-like, the lodicules in both mutants are transformed into glume-lodicule mosaic structures and there are decreased numbers of stamens and pistils, which suggest a role of JA in floral meristem determinacy and floral organ identity [51].
Youssef et al. [9] revealed that barley spikes (i.e., the two-rowed cv. Bowman) have higher concentrations of GA20ox (GA 53, GA44 and GA19) in the central spike parts during the white (WA) and green anther (GA) developmental stages compared with BW-NIL (vrs2.e). IAA has a high concentration in the basal part of a spike at the WA and GA stages that is in an antagonistic trend to cytokinin (t-Zeatin) [9]. Although barley spikes have an indeterminate number of rachis nodes, each node produces three single spikelets—one central and two lateral (e.g., VRS1)—or produces many spikelets (supernumerary spikelets) per node (e.g., VRS2 and VRS4). Because the lateral spikelets are sterile in the two-rowed barley (VRS1), one can suppose that the phytohormones might play a role in the fertility of the lateral spikelets, spikelet development, supernumerary spikelet development and shaping the spike architecture (Figure 2). Interestingly, because the spatiotemporal patterns of a phytohormone are in synchrony with spikelet fertility and abortion, understanding the pattern of a phytohormone along the spike (basal, central and top), a specific spike organ (e.g., anther) and spikelet sections (lateral vs. central) during this critical phase (awn primordium and awn tipping) is important for regulating the yield processes such as spikelet abortion in cereal crops.

2.4. Phytohormone Regulation of the Leaf Area

The last architectural trait, which is also important for adaptation and yield improvement, is the leaf area, which is strictly related to photosynthesis [60]. The size and shape of a leaf, the leaf position and exposure to sunlight are associated with photosynthetic efficiency and hence with the amount of assimilates that are produced by the plant [61,62]. Plants with a higher supply of photoassimilates can develop more fertile tillers, feed more spikes and increase spikelet survival, which subsequently improves yield. Because the flag leaf is the main source of carbohydrates for the developing spikes [63] in cereals, the leaf area plays an important role in the regulation of plant development in both the vegetative and reproductive phases. Heavily branched mutants usually have more leaves and hence a larger leaf area as was observed in the SL-insensitive barley mutant hvd14.d [18]. However, it should be mentioned that a larger leaf area is related to faster transpiration and water loss under drought stress. A GWAS analysis has revealed nine genes that are associated with the leaf area in barley [11]. Three of them are related to GAs, three to BRs and three to SLs (Table 1) [10,11]. Some of these genes are specifically associated with this trait, which indicates that GAs, BRs and SLs might regulate the leaf area independently from traits such as branching. In addition, this analysis provides promising candidate genes for further analysis of the promotion of leaf development in barley [11]. However, it has to be stressed that one of the SL genes—a homologue of MAX2—is also involved in the signalling pathways of other phytohormones [37]. Hence, the hormonal regulation of the development of the leaf area is still unclear and more advanced molecular genetic analyses are required in order to understand the mechanisms that underlie this process.

3. Conclusions and Remarks

Population growth and climate change are the driving forces behind the incessant efforts to improve crop plants. In order to maintain food security, crop adaptation, architecture and grain yield need to be optimised. In order to achieve this aim, it is crucial to understand the factors that regulate these important plant features. This is one reason why the functional analysis of individual genes is necessary to evaluate their precise role. To speed up the process of gene selection for breeding programmes, large-scale analyses such as GWAS are useful for identifying the genes that are related to specific traits. Recently, published results have indicated that mutants affected during BR or GA biosynthesis and signalling may be considered as a source of the alleles that promote tillering. Knowledge about gene function and gene position within a genome permits the direct and accurate screening of barley varieties and mutant collections, thus avoiding costly and lengthy phenotypic studies. This review contributes to establishing a basis for further molecular physiology and genetic work within the context of barley plant architecture that is based on hormonal effects.

Acknowledgments

The authors would like to thank Twan Rutten for the critical reading of the manuscript.

Author Contributions

Marek Marzec and Ahmad M. Alqudah confirmed their contribution of this work and prepared it for publication.

Funding

Marek Marzec is supported by scholarships funded by the Ministry of Science and Higher Education (424/STYP/10/2015 and DN/MOB/245/IV/2015). Ahmad M. Alqudah supported by Leibniz Institute of Plant Genetics and Crop Plant Research (IPK).

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Ray, D.K.; Gerber, J.S.; MacDonald, G.K.; West, P.C. Climate variation explains a third of global crop yield variability. Nat. Commun. 2015, 6, 5989. [Google Scholar] [CrossRef] [PubMed]
  2. Donald, C.M.T. The breeding of crop ideotypes. Euphytica 1968, 17, 385–403. [Google Scholar] [CrossRef]
  3. Tao, F.; Rötter, R.P.; Palosuo, T.; Díaz-Ambron, C.G.H.; Mínguez, M.I.; Semenov, M.A.; Kersebaum, K.C.; Nendel, C.; Cammarano, D.; Hoffmann, H.; et al. Designing future barley ideotypes using a crop model ensemble. Eur. J. Agron. 2017, 82, 144–162. [Google Scholar] [CrossRef]
  4. Rasmusson, D.C. A plant breeder’s experience with ideotype breeding. Field Crops Res. 1991, 26, 191–200. [Google Scholar] [CrossRef]
  5. Tilman, D.; Balzer, C.; Hill, J.; Befort, B.L. Global food demand and the sustainable intensification of agriculture. Proc. Natl. Acad. Sci. USA 2011, 108, 20260–20264. [Google Scholar] [CrossRef] [PubMed]
  6. Rietveld, C.A.; Medland, S.E.; Derringer, J.; Yang, J.; Esko, T.; Martin, N.W.; Westra, H.J.; Shakhbazov, K.; Abdellaoui, A.; Agrawal, A.; et al. GWAS of 126,559 individuals identifies genetic variants associated with educational attainment. Science 2013, 340, 1467–1471. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  7. Rogers, E.D.; Benfey, P.N. Regulation of plant root system architecture: Implications for crop advancement. Curr. Opin. Biotechnol. 2015, 32, 93–98. [Google Scholar] [CrossRef] [PubMed]
  8. Peleg, Z.; Blumwald, E. Hormone balance and abiotic stress tolerance in crop plants. Curr. Opin. Plant Biol. 2011, 14, 290–295. [Google Scholar] [CrossRef] [PubMed]
  9. Youssef, H.M.; Eggert, K.; Koppolu, R.; Alqudah, A.M.; Poursarebani, N.; Fazeli, A.; Sakuma, S.; Tagiri, A.; Rutten, T.; Govind, G.; et al. VRS2 regulates hormone-mediated inflorescence patterning in barley. Nat. Genet. 2017, 49, 157–161. [Google Scholar] [CrossRef] [PubMed]
  10. Alqudah, A.M.; Koppolu, R.; Wolde, G.M.; Graner, A.; Schnurbusch, T. The Genetic Architecture of Barley Plant Stature. Front. Genet. 2016, 7, 117. [Google Scholar] [CrossRef] [PubMed]
  11. Alqudah, A.M.; Youssef, H.M.; Graner, A.; Schnurbusch, T. Natural variation and genetic make-up of leaf blade area in spring barley. Theor. Appl. Genet. 2018. [Google Scholar] [CrossRef] [PubMed]
  12. Reinert, S.; Kortz, A.; Leon, J.; Naz, A.A. Genome-Wide Association Mapping in the Global Diversity Set Reveals New QTL Controlling Root System and Related Shoot Variation in Barley. Front. Plant Sci. 2016, 7, 1061. [Google Scholar] [CrossRef] [PubMed]
  13. Digel, B.; Tavakol, E.; Verderio, G.; Tondelli, A.; Xu, X.; Cattivelli, L.; Rossini, L.; von Korff, M. Photoperiod-H1 (Ppd-H1) Controls Leaf Size. Plant Physiol. 2016, 172, 405–415. [Google Scholar] [CrossRef] [PubMed]
  14. Thirulogachandar, V.; Alqudah, A.M.; Koppolu, R.; Rutten, T.; Graner, A.; Hensel, G.; Kumlehn, J.; Bräutigam, A.; Sreenivasulu, N.; Schnurbusch, T.; Kuhlmann, M. Leaf primordium size specifies leaf width and vein number among row-type classes in barley. Plant J. 2017, 91, 601–602. [Google Scholar] [CrossRef] [PubMed]
  15. Ramsay, L.; Comadran, J.; Druka, A.; Marshall, D.F.; Thomas, W.T.; Macaulay, M.; MacKenzie, K.; Simpson, C.; Fuller, J.; Bonar, N.; et al. INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1. Nat. Genet. 2011, 43, 169–172. [Google Scholar] [CrossRef] [PubMed]
  16. Sukumaran, S.; Dreisigacker, S.; Lopes, M.; Chavez, P.; Reynolds, M.P. Genome-wide association study for grain yield and related traits in an elite spring wheat population grown in temperate irrigated environments. Theor. Appl. Genet. 2015, 128, 353–363. [Google Scholar] [CrossRef] [PubMed]
  17. Hedden, P. The genes of the Green Revolution. Trends Genet. 2003, 19, 5–9. [Google Scholar] [CrossRef]
  18. Marzec, M.; Gruszka, D.; Tylec, P.; Szarejko, I. Identification and functional analysis of the HvD14 gene involved in strigolactone signaling in Hordeum vulgare. Physiol. Plant 2016, 158, 341–355. [Google Scholar] [CrossRef] [PubMed]
  19. Dockter, C.; Gruszka, D.; Braumann, I.; Druka, A.; Druka, I.; Franckowiak, J.; Gough, S.P.; Janeczko, A.; Kurowska, M.; Lundqvist, J.; et al. Induced variations in brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiol. 2014, 166, 1912–1927. [Google Scholar] [CrossRef] [PubMed]
  20. Gupta, R.; Chakrabarty, S.K. Gibberellic acid in plant. Plant Signal. Behav. 2013, 8, e25504. [Google Scholar] [CrossRef] [PubMed]
  21. Tong, H.; Xiao, Y.; Liu, D.; Gao, S.; Liu, L.; Yin, Y.; Jin, Y.; Qian, Q.; Chu, C. Brassinosteroid Regulates Cell Elongation by Modulating Gibberellin Metabolism in Rice. Plant Cell 2014, 26, 4376–4393. [Google Scholar] [CrossRef] [PubMed]
  22. De Saint Germain, A.; Ligerot, Y.; Dun, E.A.; Pillot, J.-P.; Ross, J.J.; Beveridge, C.A.; Rameau, C. Strigolactones Stimulate Internode Elongation Independently of Gibberellins. Plant Physiol. 2013, 163, 1012–1025. [Google Scholar] [CrossRef] [PubMed]
  23. Daoura, B.G.; Chen, L.; Du, Y.; Hu, Y.G. Genetic effects of dwarfing gene Rht-5 on agronomic traits in common wheat (Triticum aestivum L.) and QTL analysis on its linked traits. Field Crops Res. 2014, 156, 22–29. [Google Scholar] [CrossRef]
  24. Nagano, H.; Onishi, K.; Ogasawara, M.; Horiuchi, Y.; Sano, Y. Genealogy of the “Green Revolution” gene in rice. Genes Genet. Syst. 2005, 80, 351–356. [Google Scholar] [CrossRef] [PubMed]
  25. Hellewell, K.B.; Rasmusson, D.C.; Gallo-Meagher, M. Enhancing yield in semidwarf barley. Crop Sci. 2000, 40, 352–358. [Google Scholar] [CrossRef]
  26. Al-Babili, S.; Bouwmeester, H.J. Strigolactones, a novel carotenoid-derived plant hormone. Annu. Rev. Plant Biol. 2015, 66, 161–186. [Google Scholar] [CrossRef] [PubMed]
  27. Kebrom, T.H.; Spielmeyer, W.; Finnegan, E.J. Grasses provide new insights into regulation of shoot branching. Trends Plant Sci. 2013, 18, 41–48. [Google Scholar] [CrossRef] [PubMed]
  28. Leopold, A.C. The control of tillering in grasses by auxin. Am. J. Bot. 1949, 36, 437–440. [Google Scholar] [CrossRef] [PubMed]
  29. Sharif, R.; Dale, J.E. Growth-regulating substances and the growth of tiller buds in barley; effects of cytokinins. J. Exp. Bot. 1980, 31, 921–930. [Google Scholar] [CrossRef]
  30. Liu, Y.; Gu, D.; Ding, Y.; Wang, Q.; Li, G.; Wang, S. The relationship between nitrogen, auxin and cytokinin in the growth regulation of rice (Oryza sativa L.) tiller buds. Aust. J.Crop Sci. 2011, 5, 1019–1026. [Google Scholar]
  31. Sakamoto, T.; Sakakibara, H.; Kojima, M.; Yamamoto, Y.; Nagasaki, H.; Inukai, Y.; Sato, Y.; Matsuoka, M. Ectopic expression of KNOTTED1-like homeobox protein induces expression of cytokinin biosynthesis genes in rice. Plant Physiol. 2006, 142, 54–62. [Google Scholar] [CrossRef] [PubMed]
  32. Umehara, M.; Hanada, A.; Yoshida, S.; Akiyama, K.; Arite, T.; Takeda-Kamiya, N.; Magome, H.; Kamiya, Y.; Shirasu, K.; Yoneyama, K.; et al. Inhibition of shoot branching by new terpenoid plant hormones. Nature 2008, 455, 195–200. [Google Scholar] [CrossRef] [PubMed]
  33. Marzec, M.; Muszynska, A. In Silico Analysis of the Genes Encoding Proteins that Are Involved in the Biosynthesis of the RMS/MAX/D Pathway Revealed New Roles of Strigolactones in Plants. Int. J. Mol. Sci. 2015, 16, 6757–6782. [Google Scholar] [CrossRef] [PubMed]
  34. Lo, S.F.; Yang, S.Y.; Chen, K.T.; Hsing, Y.I.; Zeevaart, J.A.; Chen, L.J.; Yu, S.M. A novel class of gibberellin 2-oxidases control semidwarfism, tillering, and root development in rice. Plant Cell 2008, 20, 2603–2618. [Google Scholar] [CrossRef] [PubMed]
  35. Jia, Q.; Zhang, X.Q.; Westcott, S.; Broughton, S.; Cakir, M.; Yang, J.; Lance, R.; Li, C. Expression level of a gibberellin 20-oxidase gene is associated with multiple agronomic and quality traits in barley. Theor. Appl. Genet. 2011, 122, 1451–1460. [Google Scholar] [CrossRef] [PubMed]
  36. Ito, S.; Yamagami, D.; Umehara, M.; Hanada, A.; Yoshida, S.; Sasaki, Y.; Yajima, S.; Kyozuka, J.; Ueguchi-Tanaka, M.; Matsuoka, M.; et al. Regulation of Strigolactone Biosynthesis by Gibberellin Signaling. Plant Physiol. 2017, 174, 1250–1259. [Google Scholar] [CrossRef] [PubMed]
  37. Marzec, M. Strigolactones and Gibberellins: A New Couple in the Phytohormone World? Trends Plant Sci. 2017, 22, 813–815. [Google Scholar] [CrossRef] [PubMed]
  38. Tong, H.; Jin, Y.; Liu, W.; Li, F.; Fang, J.; Yin, Y.; Qian, Q.; Zhu, L.; Chu, C. DWARF AND LOW-TILLERING, a new member of the GRAS family, plays positive roles in brassinosteroid signaling in rice. Plant J. 2009, 58, 803–816. [Google Scholar] [CrossRef] [PubMed]
  39. Wu, C.Y.; Trieu, A.; Radhakrishnan, P.; Kwok, S.F.; Harris, S.; Zhang, K.; Wang, J.; Wan, J.; Zhai, H.; Takatsuto, S.; et al. Brassinosteroids regulate grain filling in rice. Plant Cell 2008, 20, 2130–2145. [Google Scholar] [CrossRef] [PubMed]
  40. Chono, M.; Honda, I.; Zeniya, H.; Yoneyama, K.; Saisho, D.; Takeda, K.; Takatsuto, S.; Hoshino, T.; Watanabe, Y. A Semidwarf Phenotype of Barley uzu Results from a Nucleotide Substitution in the Gene Encoding a Putative Brassinosteroid Receptor. Plant Physiol. 2003, 133, 1209–1219. [Google Scholar] [CrossRef] [PubMed]
  41. Gruszka, D.; Szarejko, I.; Maluszynski, M. New allele of HvBRI1 gene encoding brassinosteroid receptor in barley. J. Appl. Genet. 2011, 52, 257–268. [Google Scholar] [CrossRef] [PubMed]
  42. Pearce, S.; Vanzetti, L.S.; Dubcovsky, J. Exogenous gibberellins induce wheat spike development under short days only in the presence of VERNALIZATION1. Plant Physiol. 2013, 163, 1433–1445. [Google Scholar] [CrossRef] [PubMed]
  43. Pearce, S.; Huttly, A.K.; Prosser, I.M.; Li, Y.D.; Vaughan, S.P.; Gallova, B.; Patil, A.; Coghill, J.A.; Dubcovsky, J.; Hedden, P.; et al. Heterologous expression and transcript analysis of gibberellin biosynthetic genes of grasses reveals novel functionality in the GA3ox family. BMC Plant Biol. 2015, 15, 130. [Google Scholar] [CrossRef] [PubMed]
  44. Flintham, J.E.; Börner, A.; Worland, A.J.; Gale, M.D. Optimizing wheat grain yield: Effects of Rht (gibberellin-insensitive) dwarfing genes. J. Agric. Sci. 1997, 128, 11–25. [Google Scholar] [CrossRef]
  45. Boden, S.A.; Weiss, D.; Ross, J.J.; Davies, N.W.; Trevaskis, B.; Chandler, P.M.; Swain, S.M. EARLY FLOWERING3 Regulates Flowering in Spring Barley by Mediating Gibberellin Production and FLOWERING LOCUS T Expression. Plant Cell 2014, 26, 1557–1569. [Google Scholar] [CrossRef] [PubMed]
  46. Wang, Z.; Cao, W.; Dai, T.; Zhou, Q. Effects of exogenous hormones on floret development and grain set in wheat. Plant Growth Regul. 2001, 35, 225–231. [Google Scholar] [CrossRef]
  47. Zheng, C.; Zhu, Y.; Zhu, H.; Kang, G.; Guo, T.; Wang, C. Floret development and grain setting characteristics in winter wheat in response to pre-anthesis applications of 6-benzylaminopurine and boron. Field Crops Res. 2014, 169, 70–76. [Google Scholar] [CrossRef]
  48. Patel, R.; Mohapatra, P.K. Regulation of Spikelet Development in Rice by Hormones. J. Exp. Bot. 1992, 43, 257–262. [Google Scholar] [CrossRef]
  49. Cao, W.X.; Wang, Z.; Dai, T.B. Changes in levels of endogenous plant hormones during floret development in wheat genotypes of different spike sizes. J. Integr. Plant Biol. 2000, 42, 1026–1032. [Google Scholar]
  50. Wang, R.; Yu, Z.; Pan, Q.; Xu, Y. Changes of endogenous plant hormone contents during grain development in wheat. Zuo Wu Xue Bao 1999, 25, 227–231. [Google Scholar]
  51. Cai, Q.; Yuan, Z.; Chen, M.J.; Yin, C.S.; Luo, Z.J.; Zhao, X.X.; Liang, W.Q.; Hu, J.P.; Zhang, D.B. Jasmonic acid regulates spikelet development in rice. Nat. Commun. 2014, 5, 13. [Google Scholar] [CrossRef] [PubMed]
  52. Alqudah, A.M.; Schnurbusch, T. Awn primordium to tipping is the most decisive developmental phase for spikelet survival in barley. Funct. Plant Biol. 2014, 41, 424–436. [Google Scholar] [CrossRef]
  53. Alqudah, A.M.; Schnurbusch, T. Heading Date Is Not Flowering Time in Spring Barley. Front. Plant Sci. 2017, 8, 896. [Google Scholar] [CrossRef] [PubMed]
  54. Chhun, T.; Aya, K.; Asano, K.; Yamamoto, E.; Morinaka, Y.; Watanabe, M.; Kitano, H.; Ashikari, M.; Matsuoka, M.; Ueguchi-Tanaka, M. Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice. Plant Cell 2007, 19, 3876–3888. [Google Scholar] [CrossRef] [PubMed]
  55. Ikeda, A.; Ueguchi-Tanaka, M.; Sonoda, Y.; Kitano, H.; Koshioka, M.; Futsuhara, Y.; Matsuoka, M.; Yamaguchi, J. slender Rice, a Constitutive Gibberellin Response Mutant, Is Caused by a Null Mutation of the SLR1 Gene, an Ortholog of the Height-Regulating Gene GAI/RGA/RHT/D8. Plant Cell 2001, 13, 999–1010. [Google Scholar] [CrossRef] [PubMed]
  56. Yuo, T.; Yamashita, Y.; Kanamori, H.; Matsumoto, T.; Lundqvist, U.; Sato, K.; Ichii, M.; Jobling, S.A.; Taketa, S. A SHORT INTERNODES (SHI) family transcription factor gene regulates awn elongation and pistil morphology in barley. J. Exp. Bot. 2012, 63, 5223–5232. [Google Scholar] [CrossRef] [PubMed]
  57. Eklund, D.M.; Ståldal, V.; Valsecchi, I.; Cierlik, I.; Eriksson, C.; Hiratsu, K.; Ohme-Takagi, M.; Sundström, J.F.; Thelander, M.; Ezcurra, I.; Sundberg, E. The Arabidopsis thaliana STYLISH1 Protein Acts as a Transcriptional Activator Regulating Auxin Biosynthesis. Plant Cell 2010, 22, 349–363. [Google Scholar] [CrossRef] [PubMed]
  58. Fridborg, I.; Kuusk, S.; Robertson, M.; Sundberg, E. The Arabidopsis Protein SHI Represses Gibberellin Responses in Arabidopsis and Barley. Plant Physiol. 2001, 127, 937–948. [Google Scholar] [CrossRef] [PubMed]
  59. Aya, K.; Ueguchi-Tanaka, M.; Kondo, M.; Hamada, K.; Yano, K.; Nishimura, M.; Matsuoka, M. Gibberellin Modulates Anther Development in Rice via the Transcriptional Regulation of GAMYB. Plant Cell 2009, 21, 1453–1472. [Google Scholar] [CrossRef] [PubMed]
  60. Chen, J.M.; Cihlar, J. Plant canopy gap-size analysis theory for improving optical measurements of leaf-area index. Appl. Opt. 1995, 34, 6211–6222. [Google Scholar] [CrossRef] [PubMed]
  61. Jiang, D.; Fang, J.; Lou, L.; Zhao, J.; Yuan, S.; Yin, L.; Sun, W.; Peng, L.; Guo, B.; Li, X. Characterization of a null allelic mutant of the rice NAL1 gene reveals its role in regulating cell division. PLoS ONE 2015, 10, e0118169. [Google Scholar] [CrossRef] [PubMed]
  62. Driever, S.M.; Lawson, T.; Andralojc, P.; Raines, C.A.; Parry, M. Natural variation in photosynthetic capacity, growth, and yield in 64 field-grown wheat genotypes. J. Exp. Bot. 2014, 65, 4959–4973. [Google Scholar] [CrossRef] [PubMed]
  63. Wang, F.M.; Huang, J.F.; Lou, Z.H. A comparison of three methods for estimating leaf area index of paddy rice from optimal hyperspectral bands. Precis. Agric. 2011, 12, 439–447. [Google Scholar] [CrossRef]
Figure 1. Role of phytohormones in plant development traits. Green indicates a positive effect and red indicates an inhibitory effect of a hormone on a trait; grey indicates inconsistent experimental data; a star * indicates that the inhibitory effect of ABA on leaf area was observed only under drought stress. ABA—abscisic acid, BRs—brassinosteroids, CKs—cytokinins, GAs—gibberellic acids, IAA—auxin, SLs—strigolactones.
Figure 1. Role of phytohormones in plant development traits. Green indicates a positive effect and red indicates an inhibitory effect of a hormone on a trait; grey indicates inconsistent experimental data; a star * indicates that the inhibitory effect of ABA on leaf area was observed only under drought stress. ABA—abscisic acid, BRs—brassinosteroids, CKs—cytokinins, GAs—gibberellic acids, IAA—auxin, SLs—strigolactones.
Ijms 19 00795 g001
Figure 2. Role of phytohormones in spikelet and spike development-related traits. Question marks denote that the impact of phytohormones remains undiscovered. ABA—abscisic acid, BRs—brassinosteroids, CKs—cytokinins, GAs—gibberellic acids, IAA—auxin, SLs—strigolactones.
Figure 2. Role of phytohormones in spikelet and spike development-related traits. Question marks denote that the impact of phytohormones remains undiscovered. ABA—abscisic acid, BRs—brassinosteroids, CKs—cytokinins, GAs—gibberellic acids, IAA—auxin, SLs—strigolactones.
Ijms 19 00795 g002
Table 1. List of the barley genes that are associated with agronomically important traits as identified by genome-wide association studies (GWAS) (according to [10,11]).
Table 1. List of the barley genes that are associated with agronomically important traits as identified by genome-wide association studies (GWAS) (according to [10,11]).
No.Chr.cM (POP SEQ)GeneBarley High Conf. GeneContig IdentifierTraitHormone
11H5.38BRASSINOSTEROID-6-OXIDASE (HvBRD1)AK372445morex_contig_244330 CAJW010244330TilleringBRs
21H55.52GIBBERELLIN INSENSITIVE DWARF1 (HvGID1)AK356665morex_contig_137029 CAJW010137029TilleringGAs
31H94.75GIBBERELLIN 20 OXIDASE 4 (HvGA2ox4)MLOC_13981.1morex_contig_1566970 CAJW011566970Tillering and leaf areaGAs
42H58.78GIBBERELLIN-INSENSITIVE DWARF 2 (HvGID2)MLOC_61457.1morex_contig_41142TilleringGAs
52H59.91DWARF 11 (HvD11), CYTOCHROME P450 724B1AK371371morex_contig_45000 CAJW010045000TilleringBRs
63H44.26DWARF 2 (HvD2), CYTOCHROME P450 90D2MLOC_62829.1morex_contig_47012 CAJW010047012TilleringBRs
73H46.03GIBBERELLIN 3 OXIDASE 2 (HvGA3ox2)MLOC_12855.1morex_contig_51542 CAJW010051542TilleringGAs
83H46.03DWARF 18 (HvD18)MLOC_12855.1morex_contig_51542 CAJW010051542TilleringGAs
93H51.34BRASSINOSTEROID INSENSITIVE 1 /SEMIBRACHYTIC/Dwarf61 (HvBRI1/ uzu1 HvD61/)MLOC_5176.2morex_contig_58772 CAJW010058772Tillering and leaf areaBRs
103H62.93MORE AXILLARY BRANCHES 4/ CAROTENOID CLEAVAGE DIOXYGENASE 8 /DWARF 10 (HvMAX4/CHvCD8/ HvD10)MLOC_66551.1morex_contig_51744 CAJW010051744Tillering and leaf areaSLs
113H64.16GIBBERELLIN 20 OXIDASE 1 (HvGA2ox1)AK364775morex_contig_2550522 CAJW012550522Tillering and leaf areaGAs
123H106.02GIBBERELLIN 20 OXIDASE 3 (HvGA20ox3)MLOC_66389.1morex_contig_51490 CAJW010051490TilleringGAs
134H59.63DWARF 4 (HvD4)AK355174morex_contig_61948 CAJW010061948Plant heightBRs
145H44.02BRASSINOSTEROID C-23 HYDROXYLASE (HvCPD)MLOC_10658.1morex_contig_1559549 CAJW011559549Tillering, plant height and leaf areaBRs
155H46.59DWARF 53 (HvD53)AK372211morex_contig_244827 CAJW010244827Leaf areaSLs
165H47.22BRITTLE CULM12/ GIBBERELLIN-DEFICIENT DWARF 1 (HvBC12/GGD1)AK373790morex_contig_45441 CAJW010045441TilleringGAs
175H80.8DWARF RICE WITH OVEREXPRESSION OF GIBBERELLIN-INDUCED GENE (HvDOG)sAK359310morex_contig_1575121 CAJW011575121TilleringGAs
187H29.95MORE AXILLARY BRANCHES 2 (HvMAX2)MLOC_4044.5morex_contig_134615 CAJW01013461Leaf areaSLs
197H77.4DWARF 35 (HvD35), CYTOCHROME P450 701A6AK369327morex_contig_1575857 CAJW011575857Tillering and leaf areaGAs
207H140.65BRASSINOSTEROID DEFICIENT DWARF 2/ DIMINUTO, DWARF1 (HvBRD2/HvDIM/HvDWF1)MLOC_52405.2morex_contig_37512 CAJW010037512Tillering and leaf areaBRs
ABA—abscisic acid, BRs—brassinosteroids, CKs—cytokinins, GAs—gibberellic acids, IAA—auxin, SLs—strigolactones.
Table 2. Phytohormone-related genes involved in spikelet development and fertility.
Table 2. Phytohormone-related genes involved in spikelet development and fertility.
ChrPhysical pos.GeneBarley HC GeneAnnotationAccessionGO TermFunctionHormone
3H627490751-627493520EXTRA GLUME 1 EG1HORVU3Hr1G089140Phospholipase A1-II 124647160GO:0006629Regulation of spikelet development [51]JA [51]
2H725648938–725655525EXTRA GLUME 2 EG2HORVU2Hr1G112360jasmonate-zim-domain protein 12AK069326noneRegulation of spikelet development [51]JA [51]
4H16668801–16671743SLENDER 1 SL1HORVU4Hr1G006930DELLA proteinAB262980noneRegulation of floral development and spikelet fertilityGAs
1H441473716–441477633GIBBERELLIN INSENSITIVE DWARF1 GID1HORVU1Hr1G060810Gibberellin receptor GID1AK074026GO:0008152, GO:0016787 GAs
5H564406197–564410417Six-rowed spike 2 VRS2HORVU5Hr1G081450.1SHI-related sequence 5KX601696.1noneRegulation of spikelet development and fertility [9], awn elongation and pistil shape [56]IAA [57], GAs [58]
GAs—gibberellic acids, IAA—auxin, JA—jasmonic acid.

Share and Cite

MDPI and ACS Style

Marzec, M.; Alqudah, A.M. Key Hormonal Components Regulate Agronomically Important Traits in Barley. Int. J. Mol. Sci. 2018, 19, 795. https://doi.org/10.3390/ijms19030795

AMA Style

Marzec M, Alqudah AM. Key Hormonal Components Regulate Agronomically Important Traits in Barley. International Journal of Molecular Sciences. 2018; 19(3):795. https://doi.org/10.3390/ijms19030795

Chicago/Turabian Style

Marzec, Marek, and Ahmad M. Alqudah. 2018. "Key Hormonal Components Regulate Agronomically Important Traits in Barley" International Journal of Molecular Sciences 19, no. 3: 795. https://doi.org/10.3390/ijms19030795

Note that from the first issue of 2016, this journal uses article numbers instead of page numbers. See further details here.

Article Metrics

Back to TopTop